Miyakogusa Predicted Gene
- Lj0g3v0278899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0278899.1 Non Chatacterized Hit- tr|I1LN12|I1LN12_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18448
PE,80.59,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; no description,Tetratricopeptide-like ,CUFF.18551.1
(670 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 1003 0.0
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 203 4e-52
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 7e-51
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 4e-49
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 187 3e-47
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 184 1e-46
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 7e-46
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 8e-46
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 181 2e-45
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 180 2e-45
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 3e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 179 7e-45
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 3e-44
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 171 2e-42
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 4e-42
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 5e-42
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 7e-42
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 7e-42
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 3e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 3e-41
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 167 3e-41
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 6e-41
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 3e-40
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 163 4e-40
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 162 9e-40
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 2e-39
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 4e-39
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 4e-39
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 1e-38
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-38
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 3e-38
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 6e-37
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 152 1e-36
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 4e-36
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 4e-36
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 147 3e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 3e-34
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 142 8e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 9e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 2e-33
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 4e-33
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 139 5e-33
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 8e-33
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 5e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 136 6e-32
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 8e-32
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-31
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 3e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 132 6e-31
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 130 3e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 130 4e-30
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 7e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 127 4e-29
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 127 4e-29
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 124 2e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 122 7e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 8e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 112 1e-24
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 110 4e-24
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 106 6e-23
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 104 2e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 104 2e-22
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 99 1e-20
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 99 1e-20
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 98 2e-20
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 96 9e-20
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 96 1e-19
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 95 2e-19
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 94 3e-19
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 93 7e-19
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 8e-19
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 91 2e-18
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 89 1e-17
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 89 1e-17
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 88 2e-17
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 86 1e-16
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 85 1e-16
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 85 1e-16
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 84 3e-16
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-16
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 83 7e-16
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 8e-16
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 82 1e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 82 2e-15
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 82 2e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 81 3e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 80 4e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 80 7e-15
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 79 8e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 79 1e-14
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 77 3e-14
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 77 3e-14
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 77 3e-14
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 77 4e-14
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 76 7e-14
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 76 8e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 74 3e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 74 4e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 70 4e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 68 2e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 59 8e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 59 1e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 59 1e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 55 1e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 7e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 50 7e-06
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/617 (76%), Positives = 542/617 (87%), Gaps = 7/617 (1%)
Query: 55 KDVW----TRTTPSPYH---RRTRTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSLY 107
K VW + T S + + R Q+ FLDH++DMDELLASI TQNE+EL +++S Y
Sbjct: 56 KKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTY 115
Query: 108 NQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
RQLSIRFMVSLLSRE DWQR+LALLDW++E+A Y+PSVFAYNVVLRNVLRAKQ+ +AH
Sbjct: 116 KDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 175
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELS 227
GLFDEMRQR LAPDRYTYSTLIT FGK G+ DS+L WLQ+MEQD VSGDLVLYSNLIELS
Sbjct: 176 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS 235
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
R+L DYSKAISIF+RLK S I PDL+AYNSMINV+GKAKLFREARLL++EM + GV P+T
Sbjct: 236 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
VSYSTLL++YV+N +F+EALSVF+EM + C LDLTTCNIMIDVYGQL MV+E DRLFWS
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
+RKM IEPNVVSYNT+LRVYGE+ELFGEAIHLFRLMQ+K ++QNVVTYNTMI IYGK++E
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
HEKATNL+QEMQ+ GI+PNAITYSTIISIW KAGKLDRAA LFQKLRSSGV+IDQVLYQT
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 468 MIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
MIVAYER GL+ HAKRLLHELK PDNIPRETAI +LA+A R EEATWVFRQAF +GEV D
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
ISVFGCMINLYSRN++Y NV+EVFEKMR GYFPDSNVIA+VLNA+GK REFEKAD +Y
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 595
Query: 588 QIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERAD 647
++ +EGCVFPDEVHFQMLSLY ++KDF MVESLF++L+S+PN+N KELHLVV+ +YERAD
Sbjct: 596 EMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERAD 655
Query: 648 RLNDASRIMNRMNHKAI 664
+LNDASR+MNRM + I
Sbjct: 656 KLNDASRVMNRMRERGI 672
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 232/448 (51%), Gaps = 9/448 (2%)
Query: 130 ALALLD--WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
A+AL+D ++ E Y P+ +N ++ + + A L D M RG PD +TY T
Sbjct: 169 AVALVDQMFVME---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
++ K G +D +L L++ME+ + D+V+Y+ +I+ + + A+++F +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
I P+++ YNS+I + +A LL +M + + P+ V++S L+ +V + VEA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
++ EM D+ T + +I+ + ++E +F M PNVV+YNTL++ +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
+++ E + LFR M ++G+ N VTYNT+I ++ + + A + ++M ++G+ P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
ITYS ++ K GKL++A ++F+ L+ S ++ D Y MI +AG V L
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 488 LK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
L +P+ I T I R EEA +FR+ G + + + +I R+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLN 571
E+ ++MR G+ D++ I++V+N
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 12/496 (2%)
Query: 91 ISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAY 150
IS + Q L LY S +++ R + ALA+L + K Y P +
Sbjct: 100 ISLGERMQNLRISYDLY-----SYNILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTL 153
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
+ +L K+ A L D+M P+ T++TLI H ++ + +M
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
DL Y ++ K GD A+S+ +++ I D++ Y ++I+ K +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L EM + G+ P+ V+Y++L+ + R+ +A + S+M + K ++ T + +ID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
+ + + E ++L+ M K I+P++ +Y++L+ + + EA H+F LM K
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
NVVTYNT+I + K+ E+ L +EM G+ N +TY+T+I +AG D A +F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARA 506
+K+ S GV D + Y ++ + G + A + L++ PD I + +A
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
+VE+ +F G ++ ++ MI+ + R +F +M+E G P+S
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 567 ALVLNAFGKLREFEKA 582
++ A +LR+ +KA
Sbjct: 574 NTLIRA--RLRDGDKA 587
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 198/440 (45%), Gaps = 4/440 (0%)
Query: 155 RNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS 214
RNVL + A LF EM Q P ++ L++ K D + ++M+ +S
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 215 GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
DL Y+ LI + A+++ ++ PD++ +S++N + K EA L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
+ +M P+TV+++TL+ + + EA+++ M C DL T +++ +
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
++ L M K IE +VV Y T++ + +A++LF M KG++ NVVT
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
YN++I A+ L+ +M I PN +T+S +I + K GKL A L+ ++
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVE 510
+ D Y ++I + + AK + + D P T I +A+RVE
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
E +FR+ G V + + +I + ++F+KM G PD +++L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 571 NAFGKLREFEKADALYSQIH 590
+ K + EKA ++ +
Sbjct: 473 DGLCKYGKLEKALVVFEYLQ 492
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 169/330 (51%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L W A LL + E+ + +P+V ++ ++ ++ + A L+DEM +R
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD +TYS+LI F H LD + + M + ++V Y+ LI+ K +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + + + + YN++I +A A+ + ++M +GV PD ++YS LL
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ +AL VF + +K D+ T NIMI+ + VE+G LF S+ G++PN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V+ Y T++ + L EA LFR M++ G N TYNT+I + + + LI+
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ G +A T S +I++ G+L+++
Sbjct: 595 EMRSCGFVGDASTISMVINMLHD-GRLEKS 623
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 189/440 (42%), Gaps = 42/440 (9%)
Query: 198 LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
LD ++ +M Q +V ++ L+ K+ + IS+ R++ I+ DL +YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
+IN F + A +L +M G PD V+ S+LL Y +R EA+++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV------- 173
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
D++F M +PN V++NTL+ EA+
Sbjct: 174 ------------------------DQMFV----MEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
L M +G Q ++ TY T++N K + + A +L+++M+ I+ + + Y+TII
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDN 493
++ A LF ++ + G++ + V Y ++I G + A RLL ++ P+
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ I + ++ EA ++ + DI + +IN + + + +FE
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKD 613
M FP+ ++ F K + E+ L+ ++ G V + ++ D
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 614 FTMVESLFEKLDSN---PNI 630
M + +F+K+ S+ P+I
Sbjct: 446 CDMAQKIFKKMVSDGVPPDI 465
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 242/524 (46%), Gaps = 8/524 (1%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEM-RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
+ +V + W + LF M RQ P+ + Y+ +I+ G+ GLLD L +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
VS + Y+ LI + G Y ++ + R+K I+P ++ YN++IN + L
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 269 REARL-LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
E L L EMR G+ PD V+Y+TLL+ EA VF MND DLTT +
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+++ +G+L +E+ L M G P++ SYN LL Y +S EA+ +F MQ G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
N TY+ ++N++G+S ++ L EM+++ P+A TY+ +I ++ + G
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA----IMVL 503
LF + ++ D Y+ +I A + GL A+++L + D +P A I
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
+A EEA F G I F ++ ++R + ++ + G +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFE 622
+ + A+ + +FE+A Y + C PDE + +LS+Y + FE
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD-PDERTLEAVLSVYSFARLVDECREQFE 586
Query: 623 KLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIGN 666
++ ++ + + ++ +Y + +R +D + ++ M + N
Sbjct: 587 EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSN 630
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/596 (21%), Positives = 277/596 (46%), Gaps = 12/596 (2%)
Query: 80 HSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIR---FMVSLLSRETDWQRALALLDW 136
+S D++ L+ +SS + + ++ + +LS+ + + DWQR+L L +
Sbjct: 72 YSYDVESLINKLSSLPPRGSIARCLDIF-KNKLSLNDFALVFKEFAGRGDWQRSLRLFKY 130
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
+ + P+ Y +++ + R +FDEM +G++ ++Y+ LI +G++G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG-DYSKAISIFARLKASSIAPDLIAY 255
++SL L +M+ + +S ++ Y+ +I + G D+ + +FA ++ I PD++ Y
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
N++++ L EA ++ + M D G+ PD +YS L+ + R + + EM
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
D+T+ N++++ Y + ++E +F M+ G PN +Y+ LL ++G+S + +
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
LF M+ + TYN +I ++G+ ++ L +M I+P+ TY II
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK---RLLHELKRPD 492
K G + A + Q + ++ + Y +I A+ +A L A +HE+
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 493 NIPR-ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+I + + AR V+E+ + + +G + F I Y + K+ V+ +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGAR 611
M + PD + VL+ + R ++ + ++ + + ML++YG
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
Query: 612 KDFTMVESLFEKLDSN--PNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
+ + V L E++ SN NI++ + ++ G Y+ +++++N + G
Sbjct: 611 ERWDDVNELLEEMLSNRVSNIHQV-IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCG 665
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 226/443 (51%), Gaps = 2/443 (0%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + E Y P F + ++ + + A L D+M QRG PD TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G +D +L L +ME + ++V+++ +I+ K A+ +F ++ I
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+++ YNS+IN + +A LL M + + P+ V+++ L+ + + VEA +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
EM D T N++I+ + + ++E ++F M PN+ +YNTL+ + +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ + + LFR M ++G+ N VTY T+I + ++ + + A + ++M +N + + +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
YS ++ GKLD A ++F+ L+ S ++++ +Y TMI +AG V A L L
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 490 -RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV 548
+PD + T I L R ++EA +FR+ G + + + +I R+
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 549 EVFEKMREVGYFPDSNVIALVLN 571
E+ ++MR G+ D++ I+LV N
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTN 613
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 189/410 (46%), Gaps = 5/410 (1%)
Query: 150 YNVVLRNVLR-AKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
Y +LRN L + A LF +M + P ++ L++ K + + +QM
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ +S DL YS I + S A+++ A++ PD++ +S++N + +K
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+A L+ +M + G PDT +++TL+ + + EA+++ +M C DL T +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
++ + ++ L M I+ NVV +NT++ + A+ LF M+ KG+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ NVVTYN++IN A+ L+ M I PN +T++ +I + K GKL A
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLA 504
L +++ + D + Y +I + + AK++ + D +P T I
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 505 RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
+ +RVE+ +FR+ G V + + +I + + + VF++M
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 5/330 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ L W A LL + EK + +P+V +N ++ + + A L +EM QR
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD TY+ LI F H LD + + M + ++ Y+ LI K
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + + + + Y ++I F +A A+++ ++M N V D ++YS LL
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ AL +F + ++ L++ N MI+ + V E LF S+ I+P+
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPD 534
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+YNT++ L EA LFR M++ G N TYNT+I + + + LI+
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM+++G +A T S + ++ G+LD++
Sbjct: 595 EMRSSGFVGDASTISLVTNMLHD-GRLDKS 623
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 177/406 (43%), Gaps = 42/406 (10%)
Query: 226 LSRKLGDYSK---AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
L +L D K A+ +F + S P ++ +N +++ K F L ++M+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 283 VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
+ D +YS + + + AL+V ++M D+ T + +++ Y + +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN-- 400
L M +MG +P+ ++ TL+ EA+ L M ++G Q ++VTY T++N
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 401 --------------------------IYGKSLEH-------EKATNLIQEMQNNGIQPNA 427
I+ ++ E A +L EM+ GI+PN
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
+TY+++I+ G+ A+ L + + + V + +I A+ + G + A++L E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 488 LKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + PD I I R++EA +F+ + + +I + +IN + + K+
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
+ VE+F +M + G ++ ++ F + + + A ++ Q+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 277/559 (49%), Gaps = 12/559 (2%)
Query: 114 IRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM 173
+ ++S+L +E A + + + E +S V++Y ++ + ++ A +F +M
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 174 RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL-QQMEQDNVSGDLVLYSNLIELSRKLGD 232
+ G P TY+ ++ FGK G + + L ++M+ D ++ D Y+ LI ++
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+ +A +F +KA+ + D + YN++++V+GK+ +EA +L EM NG P V+Y++
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
L++ Y + EA+ + ++M + D+ T ++ + + VE +F MR G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+PN+ ++N +++YG F E + +F + G+ ++VT+NT++ ++G++ + +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ +EM+ G P T++T+IS + + G ++A +++++ +GV D Y T++ A
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 473 ERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
R G+ ++++L E++ +P+ + + + A + + + + ++
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ ++ + S+ F +++E G+ PD + +++ +G+ + KA+ +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 589 IHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDS---NPNINKKELHLVVSGIYER 645
+ + G + ++ ++ DF E + ++ + P+I + V Y R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS---YNTVIYAYCR 711
Query: 646 ADRLNDASRIMNRMNHKAI 664
R+ DASRI + M + I
Sbjct: 712 NTRMRDASRIFSEMRNSGI 730
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 228/509 (44%), Gaps = 40/509 (7%)
Query: 125 TDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYT 184
T W + +L++ + + +P + YN ++ R A +F+EM+ G + D+ T
Sbjct: 258 TPWNKITSLVEKMKSDGI-APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT 316
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
Y+ L+ +GK ++ L +M + S +V Y++LI + G +A+ + ++
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
PD+ Y ++++ F +A A + +EMR+ G P+ +++ + +Y + +F
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
E + +F E+N D+ T N ++ V+GQ M E +F M++ G P ++NTL+
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y F +A+ ++R M GV ++ TYNT++ + E++ ++ EM++ +
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
PN +TY +++ + ++ L +++ S ++ VL +T+++ + L+ A+R
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 485 LHELKR----PDNIPRETAIMVLARARRVEEATWVF------------------------ 516
ELK PD + + + R + V +A V
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 517 -----------RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
R+ A G DI + +I Y RN + + +F +MR G PD
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 566 IALVLNAFGKLREFEKADALYSQIHDEGC 594
+ ++ FE+A + + GC
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 212/431 (49%), Gaps = 10/431 (2%)
Query: 177 GLAPD-RYTYSTLITHFGKHGLLDS---SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
GL+P + +LI G LDS LF + + ++ S +L+ + + +K
Sbjct: 94 GLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDL 153
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+A F + K D +I++ GK A + ++++G D SY++
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV-EEGDRLFWSMRKM 351
L++ + ++ R+ EA++VF +M + C L T N++++V+G++ + L M+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
GI P+ +YNTL+ L EA +F M+ G + VTYN ++++YGKS ++A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
++ EM NG P+ +TY+++IS + + G LD A L ++ G + D Y T++
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 472 YERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
+ERAG V A + E++ +P+ I + + E +F + G D
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
I + ++ ++ +N + V VF++M+ G+ P+ +++A+ + FE+A +Y
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 588 QIHDEGCVFPD 598
++ D G V PD
Sbjct: 514 RMLDAG-VTPD 523
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 215/474 (45%), Gaps = 72/474 (15%)
Query: 103 VMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQ 162
V++ ++ ++ ++S +R+ A+ L + + EK P VF Y +L RA +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGK 399
Query: 163 WHLAHGLFDEMRQRG-----------------------------------LAPDRYTYST 187
A +F+EMR G L+PD T++T
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
L+ FG++G+ ++M++ + ++ LI + G + +A++++ R+ +
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER----- 302
+ PDL YN+++ + ++ ++ +L EM D P+ ++Y +LL Y + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 303 ------------------------------FVEALSVFSEMNDAKCPLDLTTCNIMIDVY 332
EA FSE+ + D+TT N M+ +Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 333 GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNV 392
G+ MV + + + M++ G P++ +YN+L+ ++ S FG++ + R + KG++ ++
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 393 VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
++YNT+I Y ++ A+ + EM+N+GI P+ ITY+T I + + A + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRETAIMVLAR 505
+ G + +Q Y +++ Y + AK + +L+ D + P+ + +L R
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLER 813
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 182/362 (50%), Gaps = 7/362 (1%)
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
+ A F + D + LD + I+I + G+ V +F +++ G +V SY +L
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK-SLEHEKATNLIQEMQNNG 422
+ + S + EA+++F+ M++ G + ++TYN ++N++GK K T+L+++M+++G
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
I P+A TY+T+I+ ++ AA +F++++++G D+V Y ++ Y ++ A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 483 RLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLY 538
++L+E+ P + + I AR ++EA + Q G D+ + +++ +
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
R K + + +FE+MR G P+ + +G +F + ++ +I+ G + PD
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG-LSPD 453
Query: 599 EVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMN 657
V + +L+++G + V +F+++ + ++E + Y R A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 658 RM 659
RM
Sbjct: 514 RM 515
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 225/446 (50%), Gaps = 5/446 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + E Y P F + ++ + + A L D+M QRG PD TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G +D +L L++ME+ + D+V+Y+ +I+ K A+++F + I
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+ Y+S+I+ + +A LL +M + + P+ V++S L+ +V + VEA +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+ EM D+ T + +I+ + ++E +F M PNVV+Y+TL++ + +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
++ E + LFR M ++G+ N VTY T+I+ + ++ + + A + ++M + G+ PN +T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+ ++ K GKL +A ++F+ L+ S ++ D Y MI +AG V L L
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 490 ----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
P+ I T I R EEA + ++ G + + + +I R+
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLN 571
E+ ++MR G+ D++ I LV N
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 254/512 (49%), Gaps = 18/512 (3%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQL--------SIRFMVSLLSRETDWQRALAL 133
++ ++LL++++ N+ EL V+SL Q Q + ++ R + ALA+
Sbjct: 84 VEFNKLLSAVAK-MNKFEL--VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
L + K Y P + + +L +K+ A L D+M + G PD +T++TLI
Sbjct: 141 LAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
H ++ + QM Q DLV Y ++ K GD A+S+ +++ I D++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
YN++I+ K K +A L EM + G+ PD +YS+L++ + R+ +A + S+M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
+ K ++ T + +ID + + + E ++L+ M K I+P++ +Y++L+ + +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA H+F LM K NVVTY+T+I + K+ E+ L +EM G+ N +TY+T+
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR--- 490
I + +A D A M+F+++ S GV + + Y ++ + G +A A + L+R
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 491 -PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
PD I + +A +VE+ +F G ++ + MI+ + R
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
+ +KM+E G P+S ++ A +LR+ ++
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRA--RLRDGDR 589
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 208/446 (46%), Gaps = 5/446 (1%)
Query: 150 YNVVLRNVLR-AKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
Y +LRN L + A LF +M + P ++ L++ K + + +QM
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ +S DL YS I + S A+++ A++ PD++ +S++N + +K
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+A L+ +M + G PDT +++TL+ + + EA+++ +M C DL T +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
++ + ++ L M K IE +VV YNT++ + + +A++LF M KG+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ +V TY+++I+ A+ L+ +M I PN +T+S +I + K GKL A
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLA 504
L+ ++ + D Y ++I + + AK + + D P T I
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 505 RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
+A+RVEE +FR+ G V + + +I+ + + + N VF++M VG P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 565 VIALVLNAFGKLREFEKADALYSQIH 590
++L+ K + KA ++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQ 495
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 170/330 (51%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L W A LL + E+ + +P+V ++ ++ ++ + A L+DEM +R
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD +TYS+LI F H LD + + M + ++V YS LI+ K +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + + + + Y ++I+ F +A+ A+++ ++M GV P+ ++Y+ LL
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
N + +A+ VF + + D+ T NIMI+ + VE+G LF ++ G+ PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V++YNT++ + EA L + M++ G N TYNT+I + + E + LI+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ G +A T + ++ G+LD++
Sbjct: 598 EMRSCGFAGDASTIGLVTNMLHD-GRLDKS 626
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 187/415 (45%), Gaps = 10/415 (2%)
Query: 226 LSRKLGDYSK---AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
L +L D K A+ +F + S P ++ +N +++ K F L ++M+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 283 VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
+ D +YS + + + AL+V ++M D+ T + +++ Y + +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
L M +MG +P+ ++ TL+ EA+ L M ++G Q ++VTY T++N
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
K + + A +L+++M+ I+ + + Y+TII K +D A LF ++ + G++ D
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQ 518
Y ++I G + A RLL ++ P+ + I + ++ EA ++ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
DI + +IN + + + +FE M FP+ + ++ F K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 579 FEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDS---NPNI 630
E+ L+ ++ G V + ++ + +D + +F+++ S +PNI
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 239/478 (50%), Gaps = 10/478 (2%)
Query: 91 ISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAY 150
IS + Q L +LY + +++ R + ALALL + K Y PS+
Sbjct: 105 ISLGEKMQRLGISHNLY-----TYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTL 158
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
+ +L K+ A L D+M + G PD T++TLI H ++ + +M Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
+LV Y ++ K GD A ++ +++A+ I +++ Y+++I+ K + +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L EM + GV P+ ++YS+L++ + ER+ +A + S+M + K ++ T N +ID
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
+ + + E ++L+ M K I+P++ +Y++L+ + + EA H+F LM K
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
NVVTYNT+IN + K+ ++ L +EM G+ N +TY+T+I + +A D A M+F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR--ETAIMV--LARA 506
+++ S GV + + Y T++ + G + A + L+R P IM+ + +A
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
+VE+ +F G D+ ++ MI+ + R +F KMRE G PDS
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 211/452 (46%), Gaps = 4/452 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+S Y +LRN L + + A GLF M + P + ++ L++ K D +
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
++M++ +S +L Y+ LI + S A+++ ++ P ++ +S++N +
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K +A L+ +M + G PDT++++TL+ + + EA+++ M C +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T ++++ + ++ L M IE NVV Y+T++ + +A++LF
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M+ KGV+ NV+TY+++I+ A+ L+ +M I PN +T++ +I + K GK
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ET 498
L A L+ ++ + D Y ++I + + AK + + D P T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I +A+R++E +FR+ G V + + +I+ + + + N VF++M G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
P+ +L+ K + EKA ++ +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL L + K + P+V Y+ ++ + ++W A L +M +R + P+ T++ LI
Sbjct: 279 ALNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
F K G L + +M + ++ D+ YS+LI +A +F + +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+++ YN++IN F KAK E L +EM G+ +TV+Y+TL+ + A V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
F +M ++ T N ++D + +E+ +F +++ +EP + +YN ++ +
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ + LF + KGV+ +V+ YNTMI+ + + E+A L ++M+ +G P++ T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 43/418 (10%)
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
S KL D AI +F + S P + +N +++ K K F L ++M+ G+ +
Sbjct: 63 SMKLDD---AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN 119
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+Y+ L+ + + AL++ +M + T + +++ Y + + L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN------ 400
M +MG P+ +++ TL+ EA+ L M ++G Q N+VTY ++N
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 401 ----------------------IYGKSLE------HE-KATNLIQEMQNNGIQPNAITYS 431
IY ++ HE A NL EM+N G++PN ITYS
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL-KR 490
++IS + A+ L + + + V + +I A+ + G + A++L E+ KR
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 491 ---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
PD + I R++EA +F + ++ + +IN + + K+
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 548 VEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
VE+F +M + G ++ +++ F + R+ + A ++ Q+ +G V P+ + + L
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTL 476
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
Y P F +N ++ + R + A L D M +G PD TY ++ K G +D +L
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L++MEQ + +V+Y+ +I+ + + A+++F + I P+++ YNS+I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ +A LL +M + + P+ V++S L+ +V + VEA ++ EM D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T + +I+ + ++E +F M PNVV+YNTL++ + +++ E + LFR
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M ++G+ N VTY T+I+ + ++ E + A + ++M ++G+ P+ +TYS ++ GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRET 498
++ A ++F+ L+ S ++ D Y MI +AG V L L +P+ + T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ R EEA +FR+ G + D + +I + R+ E+ +MR
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 559 YFPDSNVIALVLN 571
+ D++ I LV N
Sbjct: 602 FVGDASTIGLVTN 614
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 246/513 (47%), Gaps = 18/513 (3%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQ--------LSIRFMVSLLSRETDWQRALAL 133
++ +LL++I+ + V+SL Q Q + +++ R + ALA+
Sbjct: 82 VEFSKLLSAIAKMN---KFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
L + K Y P + N +L + A L +M + G PD +T++TLI
Sbjct: 139 LAKM-MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
+H ++ + +M DLV Y ++ K GD A+S+ +++ I P ++
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
YN++I+ K +A L EM + G+ P+ V+Y++L+ + R+ +A + S+M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
+ K ++ T + +ID + + + E ++L+ M K I+P++ +Y++L+ + +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA H+F LM K NVVTYNT+I + K+ ++ L +EM G+ N +TY+T+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR--- 490
I + +A + D A ++F+++ S GV D + Y ++ G V A + L+R
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 491 -PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
PD I + +A +VE+ +F G ++ + M++ + R
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+F +M+E G PDS ++ A LR+ +KA
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRA--HLRDGDKA 588
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 7/459 (1%)
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
W+ + +S + Y + N L + A LF +M + P +S L++ K
Sbjct: 38 WVRD---FSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM 94
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
D + +QM+ +S +L YS LI + S A+++ A++ PD++
Sbjct: 95 NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
NS++N F +A L+ +M + G PD+ +++TL+ + R EA+++ M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
C DL T I+++ + ++ L M + IEP VV YNT++ + +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
A++LF M KG++ NVVTYN++I A+ L+ +M I PN +T+S +I
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
+ K GKL A L+ ++ + D Y ++I + + AK + + D P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 496 R----ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
T I +A+RV+E +FR+ G V + + +I+ + + ++ N VF
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
++M G PD +++L+ + E A ++ +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 227/504 (45%), Gaps = 13/504 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ ++ +L + + ++ L L ++M+ G++ + YTYS LI F + L +L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + D+V ++L+ S A+S+ ++ PD +N++I+ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L+ M G PD V+Y ++ ALS+ +M K +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +ID V + LF M GI PNVV+YN+L+R + +A L M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
++ + NVVT++ +I+ + K + +A L EM I P+ TYS++I+ + +LD
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAI 500
A +F+ + S + V Y T+I + +A V L E+ + + + T I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+AR + A VF+Q + G + DI + +++ N K + VFE ++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVES 619
PD +++ K + E L+ + +G V P+ V + M+S + + ++
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 620 LFEKLDSNPNINKKELHLVVSGIY 643
LF ++ K+E L SG Y
Sbjct: 558 LFREM-------KEEGPLPDSGTY 574
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 173/330 (52%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L W A LL + E+ + +P+V ++ ++ ++ + A L+DEM +R
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD +TYS+LI F H LD + + M + ++V Y+ LI+ K +
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + + + + Y ++I+ F +A+ A+++ ++M +GV PD ++YS LL
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+N + AL VF + +K D+ T NIMI+ + VE+G LF S+ G++PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+Y T++ + L EA LFR M+++G + TYNT+I + + + + LI+
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ +A T + ++ G+LD++
Sbjct: 596 EMRSCRFVGDASTIGLVTNMLHD-GRLDKS 624
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 181/409 (44%), Gaps = 40/409 (9%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+++F + S P ++ ++ +++ K F L ++M++ G+ + +YS L+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + AL+V ++M D+ T N +++ + + + + L M +MG +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG------------ 403
+ ++NTL+ EA+ L M KG Q ++VTY ++N
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 404 KSLEHEK-----------------------ATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
K +E K A NL EM N GI+PN +TY+++I
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL-KR---PDNIPR 496
G+ A+ L + + + V + +I A+ + G + A++L E+ KR PD
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ I R++EA +F + ++ + +I + + K+ +E+F +M +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
G ++ +++ F + RE + A ++ Q+ +G V PD + + +L
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG-VLPDIMTYSIL 472
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/645 (22%), Positives = 278/645 (43%), Gaps = 113/645 (17%)
Query: 98 QELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNV 157
+++ +S + +R LS + +L + W+RA+ + +W K Y +V YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 197
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
+A +W L+DEM ++G+ P TY TLI + K GL +L WL +M + + D
Sbjct: 198 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 257
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKA------SSIAPDLIAYNSMINVFGKAKLFREA 271
V ++++ +K ++ KA F + S + YN+MI+ +GK+ +EA
Sbjct: 258 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 317
Query: 272 RLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDV 331
+ M + G+ P TV+++T++ IY +N + E S+ M C D T NI+I +
Sbjct: 318 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISL 376
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL--------------------------- 364
+ + + +E F M+ G++P+ VSY TLL
Sbjct: 377 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 436
Query: 365 --------RVYGESELFGEAIHLFRL------MQKKGVQQNV------------------ 392
R+Y E+E+ ++ F+ M +G N+
Sbjct: 437 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 496
Query: 393 ---------VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ YN MI YG S EKA L + M + G+ P+ TY+T++ I A
Sbjct: 497 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 556
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+ +K+R +G D + Y +I ++ + G + A+ + E+ + P
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEP-------- 608
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
D+ V+G +IN ++ + E M+E G +S
Sbjct: 609 -----------------------DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGC---VFPDEVHFQ-MLSLYGARKDFTMVES 619
+ ++ + K+ ++A+A+Y ++ + C +PD M++LY R E+
Sbjct: 646 VIYNSLIKLYTKVGYLDEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVRKAEA 704
Query: 620 LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+F+ + N+ +++ +Y++ R +A++I +M I
Sbjct: 705 IFDSMKQRGEANEFTFAMMLC-MYKKNGRFEEATQIAKQMREMKI 748
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 215/511 (42%), Gaps = 75/511 (14%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
S + YN ++ ++ Q A F M + G+ P T++T+I +G +G L +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ M+ + + D Y+ LI L K D +A + F +K + PD ++Y +++ F
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA--------K 317
+ EA L+ EM D+ V D + S L +YV+ E ++ S F + A
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 318 CPLD--------------LTTC-----------NIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+D C N+MI YG E+ LF SM G
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 353 IEPNVVSYNTLLRVYGESEL--------------------------------FGE---AI 377
+ P+ +YNTL+++ +++ G+ A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+++ M + ++ +VV Y +IN + + ++A + ++ M+ GI N++ Y+++I ++
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 438 EKAGKLDRAAMLFQKLRSSGVQI---DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
K G LD A +++KL S + D MI Y +V A+ + +K+
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA 715
Query: 495 PRETAIMVLA---RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
T M+L + R EEAT + +Q + D + ++ L++ + ++ VE F
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
++M G PD + + KL +KA
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 166/318 (52%), Gaps = 6/318 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V YNV+++ +K A LF+ M G+ PD+ TY+TL+ + +L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
++M + D + Y +I KLG + A ++ + +I PD++ Y +IN F
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM----NDAKCPLD 321
++A ++ M++ G+ ++V Y++L+ +Y EA +++ ++ N + P D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-D 682
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ T N MI++Y + MV + + +F SM++ G E N ++ +L +Y ++ F EA + +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
M++ + + ++YN+++ ++ ++A +EM ++GIQP+ T+ ++ +I K G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 442 KLDRAAMLFQKLRSSGVQ 459
+A +++R ++
Sbjct: 802 MSKKAVRKIEEIRKKEIK 819
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
Y Y V+ + ++ Q ++A ++ EM + + PD Y LI F G + ++
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS---SIAPDLIAYNSMI 259
+++ M++ + G+ V+Y++LI+L K+G +A +I+ +L S + PD+ N MI
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
N++ + + R+A + M+ G + +++ +L +Y N RF EA + +
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAKQ------- 742
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
MR+M I + +SYN++L ++ F EA+
Sbjct: 743 ----------------------------MREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
F+ M G+Q + T+ ++ I K +KA I+E++ I+
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 233/470 (49%), Gaps = 7/470 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M++ L R + ALA+L + K Y PS+ N +L + A L D+M +
Sbjct: 106 MINCLCRRSQLSFALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G PD T++TL+ +H ++ +++M DLV Y +I K G+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+++ +++ I D++ Y+++I+ K + +A L EM + G+ PD +YS+L++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ R+ +A + S+M + K ++ T N +ID + + + E ++LF M + I+PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+V+YN+L+ + + EA +F LM K +VVTYNT+IN + K+ + L +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+M G+ N +TY+T+I + +A D A M+F+++ S GV + + Y T++ + G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 477 LVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
+ A + L++ PD + +A +VE+ +F G D+ +
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
MI+ + + +F KM+E G PDS ++ A LR+ +KA
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HLRDGDKA 572
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 221/444 (49%), Gaps = 5/444 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + E Y P + ++ + + + A L + M +G PD TY +I
Sbjct: 154 AVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G D +L L +ME+ + D+V+YS +I+ K A+++F + I
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+ Y+S+I+ + +A LL +M + + P+ V++++L+ + + +EA +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
F EM ++ T N +I+ + ++E ++F M P+VV+YNTL+ + +
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
++ + + LFR M ++G+ N VTY T+I+ + ++ + + A + ++M ++G+ PN +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+T++ K GKL++A ++F+ L+ S ++ D Y M +AG V L L
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 490 ----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
+PD I T I + EEA +F + G + D + +I + R+
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 546 NVVEVFEKMREVGYFPDSNVIALV 569
E+ ++MR + D++ LV
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 167/330 (50%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L W A LL + E+ + +P+V +N ++ + + A LFDEM QR
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ P+ TY++LI F H LD + M + D+V Y+ LI K
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + + + + Y ++I+ F +A A+++ ++M +GV P+ ++Y+TLL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
N + +A+ VF + +K D+ T NIM + + VE+G LF S+ G++P+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V++YNT++ + + L EA LF M++ G + TYNT+I + + + + LI+
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ +A TY + + G+LD+
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHD-GRLDKG 608
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 201/440 (45%), Gaps = 4/440 (0%)
Query: 155 RNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS 214
RN L + A LF EM + P +S L++ K D + + ++ME VS
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 215 GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
+L Y+ +I + S A++I ++ P ++ NS++N F EA L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
+ +M + G PDTV+++TL+ + + EA+++ M C DL T +I+ +
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
+ L M K IE +VV Y+T++ + +A++LF M KG++ +V T
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
Y+++I+ A+ L+ +M I PN +T++++I + K GKL A LF ++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVE 510
+ + V Y ++I + + A+++ + D +P T I +A++V
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
+ +FR G V + + +I+ + + N VF++M G P+ +L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 571 NAFGKLREFEKADALYSQIH 590
+ K + EKA ++ +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQ 477
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 180/403 (44%), Gaps = 7/403 (1%)
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A+ +F + S P ++ ++ +++ K K F ++M GV + +Y+ ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+ AL++ +M + T N +++ + + + E L M +MG +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P+ V++ TL+ + EA+ L M KG Q ++VTY +IN K E + A NL
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ +M+ I+ + + YST+I K +D A LF ++ + G++ D Y ++I
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 475 AGLVAHAKRLLHE-LKR---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
G + A RLL + L+R P+ + + I A+ ++ EA +F + +I
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
+ +IN + + + ++F M PD ++N F K ++ L+ +
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 591 DEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSN---PNI 630
G V + ++ + D + +F+++ S+ PNI
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 251/523 (47%), Gaps = 12/523 (2%)
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
EK + P V + +++ + +A + A D MR +G+ P+ +TY+TLI + L
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
D +L ME V Y I+ K GD A+ F ++K IAP+++A N+
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
+ KA REA+ + ++D G+ PD+V+Y+ ++ Y EA+ + SEM + C
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
D+ N +I+ + V+E ++F M++M ++P VV+YNTLL G++ EAI
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
LF M +KG N +T+NT+ + K+ E A ++ +M + G P+ TY+TII
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL-----KRPDN 493
K G++ A F +++ V D V T++ +A L+ A +++ +P N
Sbjct: 655 KNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI-SVFGCMINLYSRNKKYTNVVEVFE 552
+ E I + ++ A + A G D S+ +I ++ + +FE
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 553 KM-REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGA 610
K +++G P L++ + E A ++ Q+ GC+ PD + +L YG
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGK 832
Query: 611 RKDFTMVESLFEKLDSNP-NINKKELHLVVSGIYERADRLNDA 652
+ L++++ ++ N ++V+SG+ +A ++DA
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLV-KAGNVDDA 874
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 222/480 (46%), Gaps = 8/480 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+ ++YN ++ +L+++ A ++ M G P TYS+L+ GK +DS + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
++ME + ++ ++ I + + G ++A I R+ PD++ Y +I+ A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTT 324
+ A+ + ++M+ PD V+Y TLL + DN +SEM D P D+ T
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVT 365
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
I++D + E MR GI PN+ +YNTL+ +A+ LF M+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
GV+ TY I+ YGKS + A ++M+ GI PN + + + KAG+
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAI 500
A +F L+ G+ D V Y M+ Y + G + A +LL E+ PD I + I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
L +A RV+EA +F + + + ++ +N K +E+FE M + G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESL 620
P++ + + K E A + ++ D GCV PD + + ++G K+ + E++
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV-PDVFTYNTI-IFGLVKNGQVKEAM 663
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 220/470 (46%), Gaps = 12/470 (2%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ PS+ Y+ ++ + + + GL EM GL P+ YT++ I G+ G ++ +
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 203 FWLQQMEQDNVSGDLVLYSNLIE---LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
L++M+ + D+V Y+ LI+ +RKL D +K +F ++K PD + Y +++
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKL-DCAK--EVFEKMKTGRHKPDRVTYITLL 335
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+ F + + EM +G PD V+++ L+ F EA M D
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
+L T N +I ++H +++ LF +M +G++P +Y + YG+S A+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
F M+ KG+ N+V N + K+ +A + +++ G+ P+++TY+ ++ + K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 495
G++D A L ++ +G + D ++ ++I +A V A ++ +K +P +
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 496 RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
T + L + +++EA +F G + F + + +N + T +++ KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
++G PD ++ K + ++A + Q+ V+PD V L
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTL 683
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 190/406 (46%), Gaps = 7/406 (1%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRG 177
+ +L R A +L ++++ P V Y V++ + A++ A +F++M+
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGC-GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 178 LAPDRYTYSTLITHFGKHGLLDS-SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
PDR TY TL+ F + LDS FW +ME+D D+V ++ L++ K G++ +A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFW-SEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
++ I P+L YN++I + +A L M GV P +Y +
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
Y + V AL F +M ++ CN + + E ++F+ ++ +G+ P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V+YN +++ Y + EAI L M + G + +V+ N++IN K+ ++A +
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
M+ ++P +TY+T+++ K GK+ A LF+ + G + + + T+ +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 477 LVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQ 518
V A ++L ++ PD T I L + +V+EA F Q
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 203/465 (43%), Gaps = 47/465 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD----- 199
P VF YN ++ +++ Q A F +M++ + PD T TL+ K L++
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 200 ------------SSLFW-------LQQMEQDNV--------------SGDLVLYSNLIEL 226
++LFW L + DN GD +L +I
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRY 758
Query: 227 SRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
S K + S A ++F + K + P L YN +I +A + A+ + +++ G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D +Y+ LL Y + + E ++ EM+ +C + T NI+I + V++ L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 346 WS-MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
+ M P +Y L+ +S EA LF M G + N YN +IN +GK
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
+ E + A L + M G++P+ TYS ++ G++D F++L+ SG+ D V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQA 519
Y +I ++ + A L +E+K PD + I+ L A VEEA ++ +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 520 FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
AG ++ F +I YS + K + V++ M G+ P++
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 190/418 (45%), Gaps = 4/418 (0%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
+FD M++R + D TY T+ G L + + L++M + + Y+ LI L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K ++A+ ++ R+ P L Y+S++ GK + LL+EM G+ P+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+++ + + + EA + M+D C D+ T ++ID ++ +F M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
+ +P+ V+Y TLL + ++ + M+K G +VVT+ +++ K+
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+A + + M++ GI PN TY+T+I + +LD A LF + S GV+ Y
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 469 IVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
I Y ++G A ++K P+ + ++ LA+A R EA +F G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
V D + M+ YS+ + +++ +M E G PD V+ ++N K ++A
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 160/326 (49%), Gaps = 2/326 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P + YN+++ +L A +A +F +++ G PD TY+ L+ +GK G +D
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS-SIAPDLIAYNSMINVFG 263
++M + + ++ +I K G+ A+ ++ L + +P Y +I+
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K+ EA+ L + M D G P+ Y+ L+ + A ++F M DL
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T ++++D + V+EG F +++ G+ P+VV YN ++ G+S EA+ LF M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 384 Q-KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+ +G+ ++ TYN++I G + E+A + E+Q G++PN T++ +I + +GK
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ A ++Q + + G + Y+ +
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 225/534 (42%), Gaps = 45/534 (8%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ S+ + A+ LL + E P V N ++ + +A + A +F M++
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGC-EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
L P TY+TL+ GK+G + ++ + M Q + + ++ L + K + + A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + ++ PD+ YN++I K +EA +M+ V PD V+ TLL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPG 686
Query: 297 YVDNERFVEALSVFSEM--NDAKCPLDL----------------------------TTC- 325
V +A + + N A P +L C
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 326 ---NIMIDV--YGQLHMVEEGDRLFWS--MRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
+I++ + Y H G R + + +G++P + +YN L+ E+++ A
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+F ++ G +V TYN +++ YGKS + ++ L +EM + + N IT++ +IS
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 439 KAGKLDRAAMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDN 493
KAG +D A L+ L S Y +I ++G + AK+L + RP+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
I +A + A +F++ G D+ + +++ + + F++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSL 607
++E G PD L++N GK E+A L++++ + PD + L L
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 40/306 (13%)
Query: 99 ELHAVMSLYNQRQLSI--RFMVSLLSRETDWQRALALL-DWINEKALYSPSVFAYNVVLR 155
EL+ MS + +I ++S L + + AL L D ++++ +SP+ Y ++
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD-FSPTACTYGPLID 899
Query: 156 NVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG 215
+ ++ + + A LF+ M G P+ Y+ LI FGK G D++ ++M ++ V
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
DL YS L++ +G + + F LK S + PD++ YN +IN GK+ EA +L
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 276 QEMRDN-GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
EM+ + G+ PD +Y++L+ L+L G
Sbjct: 1020 NEMKTSRGITPDLYTYNSLI-------------------------LNL----------GI 1044
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
MVEE +++ +++ G+EPNV ++N L+R Y S A +++ M G N T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 395 YNTMIN 400
Y + N
Sbjct: 1105 YEQLPN 1110
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 196/443 (44%), Gaps = 8/443 (1%)
Query: 223 LIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
++E R G + +F ++ I D Y ++ ++A L++MR+ G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 283 VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
+ SY+ L+ + + + EA+ V+ M L T + ++ G+ ++
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
L M +G++PNV ++ +RV G + EA + + M +G +VVTY +I+
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
+ + + A + ++M+ +P+ +TY T++ + LD + ++ G D
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQ 518
V + ++ A +AG A L ++ +P T I L R R+++A +F
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
+ G + I+ Y ++ + +E FEKM+ G P+ L + K
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 579 FEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFT-MVESLFEKLDSNPNINKKELH 636
+A ++ + D G V PD V + M+ Y + ++ L E +++ + ++
Sbjct: 484 DREAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 637 LVVSGIYERADRLNDASRIMNRM 659
+++ +Y +ADR+++A ++ RM
Sbjct: 543 SLINTLY-KADRVDEAWKMFMRM 564
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
TCN M++ +EE +F M+K I+ + +Y T+ + +A + R M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
++ G N +YN +I++ KS +A + + M G +P+ TYS+++ K +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRETA 499
D L +++ + G++ + + I RAG + A KR+ E PD +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I L AR+++ A VF + D + +++ +S N+ +V + + +M + G+
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
PD ++++A K F +A + D+G + P+
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG-ILPN 397
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 220/446 (49%), Gaps = 5/446 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + Y P+ +N ++ + + A L D M +G PD TY ++
Sbjct: 170 AVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G D + L +MEQ + +++Y+ +I+ K A+++F ++ I
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+++ Y+S+I+ + +A LL +M + + PD ++S L+ +V + VEA +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+ EM + T + +I+ + ++E ++F M P+VV+YNTL++ + +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ E + +FR M ++G+ N VTYN +I ++ + + A + +EM ++G+ PN +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+T++ K GKL++A ++F+ L+ S ++ Y MI +AG V L L
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 490 ----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
+PD + T I R EEA +F++ G + + + +I R+
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLN 571
E+ ++MR G+ D++ I LV N
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 201/412 (48%), Gaps = 5/412 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + K P + Y VV+ + + LA L ++M Q L P Y+T+I
Sbjct: 205 AMALIDRMVAKGC-QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K+ +D +L ++ME + ++V YS+LI G +S A + + + I
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+ ++++I+ F K EA L EM + P V+YS+L+ + ++R EA +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
F M C D+ T N +I + + VEEG +F M + G+ N V+YN L++ +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ A +F+ M GV N++TYNT+++ K+ + EKA + + +Q + ++P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+ +I KAGK++ LF L GV+ D V Y TMI + R G A L E+K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 490 RPDNIPRETAIMVLARAR----RVEEATWVFRQAFAAGEVNDISVFGCMINL 537
+P L RAR E + + ++ + G D S G + N+
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 247/512 (48%), Gaps = 18/512 (3%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQ--------LSIRFMVSLLSRETDWQRALAL 133
I+ +LL++I+ + V+SL Q Q + +++ R + ALA+
Sbjct: 82 IEFSKLLSAIAKMN---KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
L + K Y P++ + +L +K+ A L D+M G P+ T++TLI
Sbjct: 139 LGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
H ++ + +M DLV Y ++ K GD A ++ +++ + P ++
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
YN++I+ K K +A L +EM G+ P+ V+YS+L++ + R+ +A + S+M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
+ K D+ T + +ID + + + E ++L+ M K I+P++V+Y++L+ + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA +F M K +VVTYNT+I + K E+ + +EM G+ N +TY+ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
I +AG D A +F+++ S GV + + Y T++ + G + A + L+R
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 494 IPR--ETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
P IM+ + +A +VE+ +F G D+ + MI+ + R
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
+F++M+E G P+S ++ A +LR+ ++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRA--RLRDGDR 587
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 200/440 (45%), Gaps = 4/440 (0%)
Query: 155 RNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS 214
RN L + A LF EM + P +S L++ K D + +QM+ +
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 215 GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
+ YS LI + A+++ ++ P+++ +S++N + +K EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
+ +M G P+TV+++TL+ + + EA+++ M C DL T ++++ +
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
+ L M + +EP V+ YNT++ + + +A++LF+ M+ KG++ NVVT
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
Y+++I+ A+ L+ +M I P+ T+S +I + K GKL A L+ ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVE 510
+ V Y ++I + + AK++ + PD + T I + +RVE
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
E VFR+ G V + + +I + E+F++M G P+ +L
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 571 NAFGKLREFEKADALYSQIH 590
+ K + EKA ++ +
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQ 493
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 185/404 (45%), Gaps = 11/404 (2%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+++F + S P +I ++ +++ K F L ++M++ G+ + +YS L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + AL+V +M ++ T + +++ Y + E L M G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N V++NTL+ EA+ L M KG Q ++VTY ++N K + + A NL+
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+M+ ++P + Y+TII K +D A LF+++ + G++ + V Y ++I
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 476 GLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
G + A RLL ++ PD I + ++ EA ++ + I +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
+IN + + + ++FE M FPD ++ F K + E+ ++ ++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 592 EGCVFPDEVHFQML--SLYGARKDFTMVESLFEKLDSN---PNI 630
G V + V + +L L+ A D M + +F+++ S+ PNI
Sbjct: 425 RGLV-GNTVTYNILIQGLFQA-GDCDMAQEIFKEMVSDGVPPNI 466
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 11/343 (3%)
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
+A L EM + P + +S LL+ +F +S+ +M + P + T +I+I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ + + + + M K+G EPN+V+ ++LL Y S+ EA+ L M G Q
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 390 QNVVTYNTMINIYGKSLEHEKATN---LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
N VT+NT+ I+G L H KA+ LI M G QP+ +TY +++ K G D A
Sbjct: 184 PNTVTFNTL--IHGLFL-HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMV 502
L K+ ++ ++Y T+I + + A L E++ RP+ + + I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
L R +A+ + D+ F +I+ + + K +++++M + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+ ++N F ++A ++ + + C FPD V + L
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC-FPDVVTYNTL 402
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/147 (18%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L + ++A+ + +++ +++ P+++ YN+++ + +A + LF + +G+ P
Sbjct: 476 LCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
D Y+T+I+ F + G + + ++M++D + Y+ LI + GD + +
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKL 267
+++ A D + N+ +L
Sbjct: 595 KEMRSCGFAGDASTIGLVTNMLHDGRL 621
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 229/475 (48%), Gaps = 5/475 (1%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y ++ +V+ E A+AL+D + E P + + ++ + + A
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK-QRPDLVTVSTLINGLCLKGRVSEA 194
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
L D M + G PD TY ++ K G +L ++ME+ N+ +V YS +I+
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K G + A+S+F ++ I D++ Y+S+I + + +L+EM + PD
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V++S L+ ++V + +EA +++EM D T N +ID + + + + E +++F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M G EP++V+Y+ L+ Y +++ + + LFR + KG+ N +TYNT++ + +S
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ A L QEM + G+ P+ +TY ++ G+L++A +F+K++ S + + +Y
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 467 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+I A V A L L +PD + I L + + EA +FR+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLR 577
G D + +I + + VE+ E+M+ G+ DS+ I +V++ R
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 226/486 (46%), Gaps = 8/486 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ +N + V R KQ+ L G M G+ D YT + +I + + L +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L + + D + +S L+ G S+A+++ R+ PDL+ +++IN
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA +L+ M + G PD V+Y +L + AL +F +M + +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+I+ID + ++ LF M GI+ +VV+Y++L+ + + + R M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+ + +VVT++ +I+++ K + +A L EM GI P+ ITY+++I + K L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAI 500
A +F + S G + D V Y +I +Y +A V RL E+ P+ I T +
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+ ++ ++ A +F++ + G + +G +++ N + +E+FEKM++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVES- 619
+ ++++ + + A +L+ + D+G V PD V + ++ + G K ++ E+
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM-IGGLCKKGSLSEAD 545
Query: 620 -LFEKL 624
LF K+
Sbjct: 546 MLFRKM 551
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 206/459 (44%), Gaps = 47/459 (10%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
++ +++ R K+ A + + G PD T+STL+ F G + ++ +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 207 QMEQDNVSGDLVLYSNLIE---------------------------------LSR--KLG 231
+M + DLV S LI L+R K G
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+ + A+ +F +++ +I ++ Y+ +I+ K F +A L EM G+ D V+YS
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
+L+ ++ ++ + + EM D+ T + +IDV+ + + E L+ M
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
GI P+ ++YN+L+ + + EA +F LM KG + ++VTY+ +IN Y K+ +
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
L +E+ + G+ PN ITY+T++ + ++GKL+ A LFQ++ S GV V Y ++
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 472 YERAGLVAHAKRLLHELKRPDNIPRET--------AIMVLARARRVEEATWVFRQAFAAG 523
G + A + ++++ R T I + A +V++A +F G
Sbjct: 465 LCDNGELNKALEIFEKMQK----SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
D+ + MI + + +F KM+E G PD
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 203/439 (46%), Gaps = 10/439 (2%)
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
Y + ++ + I D+ MIN + + K A +L G PDT+++ST
Sbjct: 86 YDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFST 145
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
L+ + R EA+++ M + K DL T + +I+ V E L M + G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+P+ V+Y +L +S A+ LFR M+++ ++ +VV Y+ +I+ K + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+L EM+ GI+ + +TYS++I GK D A + +++ + D V + +I +
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 473 ERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ G + AK L +E+ PD I + I + + EA +F + G DI
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ +IN Y + K+ + + +F ++ G P++ ++ F + + A L+ +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 589 IHDEGCVFPDEVHFQMLSLYGARKDFTMVESL--FEKLD-SNPNINKKELHLVVSGIYER 645
+ G V P V + +L L G + + ++L FEK+ S + ++++ G+
Sbjct: 446 MVSRG-VPPSVVTYGIL-LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN- 502
Query: 646 ADRLNDASRIMNRMNHKAI 664
A +++DA + ++ K +
Sbjct: 503 ASKVDDAWSLFCSLSDKGV 521
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 161/376 (42%), Gaps = 5/376 (1%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
AI +F + S P I +N + + + K + + M NG+ D + + ++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y ++ + A SV D T + +++ + V E L M +M P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++V+ +TL+ EA+ L M + G Q + VTY ++N KS A +L
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++M+ I+ + + YS +I K G D A LF ++ G++ D V Y ++I
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 476 GLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
G ++L E+ PD + I V + ++ EA ++ + G D +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
+I+ + + ++F+ M G PD ++++N++ K + + L+ +I
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 592 EGCVFPDEVHFQMLSL 607
+G + P+ + + L L
Sbjct: 414 KG-LIPNTITYNTLVL 428
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 148/362 (40%), Gaps = 43/362 (11%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
LF SM + P + +N L ++ + + + M+ G++ ++ T MIN Y
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
+ + A +++ G +P+ IT+ST+++ + G++ A L ++ + D V
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARA----------RRV 509
T+I G V+ A L+ + +PD + + L ++ R++
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 510 EE-------------------------ATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
EE A +F + G D+ + +I + K+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQM 604
+ ++ +M PD + +++ F K + +A LY+++ G + PD + +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG-IAPDTITYNS 355
Query: 605 LSLYGARKDFTMVES--LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHK 662
L + G K+ + E+ +F+ + S + ++ Y +A R++D R+ ++ K
Sbjct: 356 L-IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 663 AI 664
+
Sbjct: 415 GL 416
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 220/459 (47%), Gaps = 9/459 (1%)
Query: 112 LSIRFMVSLL---SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLR-AKQWHLAH 167
L +R ++L SR +++A+ L + + E SP++ YNV+L + + W
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELS 227
G+ DEMR +GL D +T ST+++ + GLL + + +++ V Y+ L+++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
K G Y++A+S+ ++ +S D + YN ++ + +A +EA +++ M GV P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
++Y+T++ Y + EAL +F M +A C + T N ++ + G+ E ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
M+ G PN ++NT+L + G + +FR M+ G + + T+NT+I+ YG+
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
A+ + EM G TY+ +++ + G + ++S G + + Y
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 468 MIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQAFAAG 523
M+ Y + G +R+ + +K P T ++ + R + + F G
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
D+ +F M+++++RN Y + E +RE G PD
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 263/574 (45%), Gaps = 42/574 (7%)
Query: 114 IRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM 173
I V +L RE+ + A LLD I + Y V AY +L R ++ A LF+ M
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIPLQE-YLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 174 RQRGLAPDRYTYSTLITHFGKHGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
++ G +P TY+ ++ FGK G L L +M + D S ++ + G
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+A FA LK+ P + YN+++ VFGKA ++ EA +L+EM +N D+V+Y+
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
L+A YV EA V M + T +ID YG+ +E +LF+SM++ G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
PN +YN +L + G+ E I + M+ G N T+NTM+ + G +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ +EM++ G +P+ T++T+IS + + G A+ ++ ++ +G Y ++ A
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRET--AIMVLARAR------------RVEEA----TW 514
R G + ++ ++K P ET ++M+ A+ R++E +W
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 515 VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFG 574
+ + ++ F C + F ++ GY PD + +L+ F
Sbjct: 597 MLLRTLL------LANFKC--------RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 642
Query: 575 KLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSN---PNI 630
+ +++A+ + I ++G + PD V + ++ +Y R + E + + L+ + P++
Sbjct: 643 RNNMYDQAEGILESIREDG-LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 631 NKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ V+ G R + +A R+++ M + I
Sbjct: 702 --VSYNTVIKGFCRRG-LMQEAVRMLSEMTERGI 732
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 245/518 (47%), Gaps = 12/518 (2%)
Query: 117 MVSLLSRETDWQRALALLDWI----NEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
+V L W+RA+ L +W+ N AL + +R + R Q+ +A L D+
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQ-VIEIFVRILGRESQYSVAAKLLDK 200
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG- 231
+ + D Y+T++ + + G + ++ ++M++ S LV Y+ ++++ K+G
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+ K + + +++ + D +++++ + L REA+ E++ G P TV+Y+
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
LL ++ + EALSV EM + CP D T N ++ Y + +E + M K
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
G+ PN ++Y T++ YG++ EA+ LF M++ G N TYN ++++ GK +
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
++ +M++NG PN T++T++++ G +F++++S G + D+ + T+I A
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 472 YERAGLVAHAKRLLHELKRPD---NIPRETAIM-VLARARRVEEATWVFRQAFAAGEVND 527
Y R G A ++ E+ R + A++ LAR V + G
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
+ + M+ Y++ Y + + +++E FP ++ +L A K R ++ ++
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 588 QIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKL 624
G PD V F MLS++ + E + E +
Sbjct: 621 LFKKHG-YKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/555 (22%), Positives = 234/555 (42%), Gaps = 76/555 (13%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W++ L +LD + K L F + VL R A F E++ G P TY+
Sbjct: 262 WRKILGVLDEMRSKGLKFDE-FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
L+ FGK G+ +L L++ME+++ D V Y+ L+ + G +A + +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
+ P+ I Y ++I+ +GKA EA L M++ G P+T +Y+ +L++ R E
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ + +M C + T N M+ + G M + +R+F M+ G EP+ ++NTL+
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 367 YGE-------SELFGEAI----------------------------HLFRLMQKKGVQQN 391
YG S+++GE ++ M+ KG +
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 392 VVTYNTMINIYGKS---LEHEKATNLIQEMQ----------------------------- 419
+Y+ M+ Y K L E+ N I+E Q
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 420 ---NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+G +P+ + +++++SI+ + D+A + + +R G+ D V Y +++ Y R G
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 477 LVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
A+ +L L++ PD + T I R ++EA + + G I +
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
++ Y+ + + +V E M + P+ +V++ + + ++ +A S+I
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
Query: 593 GCVFPDEVHFQMLSL 607
F D+ Q L+L
Sbjct: 801 DPCFDDQ-SIQRLAL 814
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 218/510 (42%), Gaps = 96/510 (18%)
Query: 211 DNVSGDLVLYSNLIELSRKL---GDYSKAISIFARLKASSIAPDLIAYNSMINVF----G 263
D+V +L L ++L+ L + L G + +A+ +F L SS + L + +I +F G
Sbjct: 128 DSVKSEL-LRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILG 186
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ + A LL ++ D +Y+T+L Y ++ +A+ +F M + L
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 324 TCNIMIDVYGQL------------------------------------HMVEEGDRLFWS 347
T N+++DV+G++ ++ E F
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
++ G EP V+YN LL+V+G++ ++ EA+ + + M++ + VTYN ++ Y ++
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK--------------- 452
++A +I+ M G+ PNAITY+T+I + KAGK D A LF
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 453 --------------------LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK--- 489
++S+G ++ + TM+ G+ R+ E+K
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 490 -RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV 548
PD T I R +A+ ++ + AG ++ + ++N +R + +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 549 EVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV-------- 600
V M+ G+ P +L+L + K + + + ++I EG +FP +
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK-EGQIFPSWMLLRTLLLA 605
Query: 601 HFQMLSLYGARKDFTMVESLFEKLDSNPNI 630
+F+ +L G+ + FT LF+K P++
Sbjct: 606 NFKCRALAGSERAFT----LFKKHGYKPDM 631
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 188/361 (52%), Gaps = 4/361 (1%)
Query: 117 MVSLLSRETDWQRAL---ALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM 173
+VS++S D R L AL + + + + P AYN +L+ ++ A + EM
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGI-KPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 174 RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDY 233
+RG++PD +TYS LI + G +S+ L++ME +V + ++S L+ R G++
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
K + +K+ + PD YN +I+ FGK A M G+ PD V+++TL
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ + + R + A +F M C TT NIMI+ YG ++ RL M+ GI
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
PNVV++ TL+ VYG+S F +AI M+ G++ + YN +IN Y + E+A N
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
+ M ++G++P+ + +++I+ + + + A + Q ++ +GV+ D V Y T++ A
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Query: 474 R 474
R
Sbjct: 666 R 666
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 226/510 (44%), Gaps = 44/510 (8%)
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
+++K +P YN ++ R A L +MRQ G D YS +I +
Sbjct: 189 LSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSN 246
Query: 197 LLDSSLFW--LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIA 254
+DS + +++E+D + D+ L +++I K GD SKA+ + +A+ ++
Sbjct: 247 KIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTAT 306
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
S+I+ + EA L +E+R +G+ P T +Y+ LL YV +A S+ SEM
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 315 DAKCPLDLTTCNIMIDVY---GQ-------LHMVEEGD---------RLF--------W- 346
D T +++ID Y G+ L +E GD RL W
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 347 -------SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
M+ +G++P+ YN ++ +G+ A+ F M +G++ + VT+NT+I
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+ + K H A + + M+ G P A TY+ +I+ + + D L K++S G+
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWV 515
+ V + T++ Y ++G A L E+K +P + I A+ E+A
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
FR + G + +IN + +++ V + M+E G PD ++ A +
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 576 LREFEKADALYSQIHDEGCVFPDEVHFQML 605
+ +F+K +Y ++ GC PD ML
Sbjct: 667 VDKFQKVPVVYEEMIMSGCK-PDRKARSML 695
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 191/454 (42%), Gaps = 48/454 (10%)
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
+LYS LI LG K F + ++ P + YN++I + +A L+ +
Sbjct: 168 LLYSILIH---ALGRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAK 222
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERF--VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
MR +G D V+YS ++ + + V L ++ E+ K LD+ N +I + +
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
+ +L + G+ + +++ +S EA LF +++ G++ Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
N ++ Y K+ + A +++ EM+ G+ P+ TYS +I + AG+ + A ++ +++ +
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEE 511
VQ + ++ ++ + G ++L E+K +PD I + ++
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 512 ATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
A F + + G D + +I+ + ++ ++ E+FE M G P + +++N
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 572 AFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNIN 631
++G ++ L ++ +G + PN+
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGIL--------------------------------PNVV 550
Query: 632 KKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
H + +Y ++ R NDA + M K++G
Sbjct: 551 T---HTTLVDVYGKSGRFNDAIECLEEM--KSVG 579
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 244/522 (46%), Gaps = 13/522 (2%)
Query: 80 HSIDMDELLASISSTQNEQELHAVMS-LYNQRQLSIRFMVSLLSRETDWQRALALLDWIN 138
+S+ +D LL ++ + +H ++S N + + ++S+E ++A AL D +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
L P AY ++ R K + L EM++R + YTY T++ G L
Sbjct: 375 ASGLI-PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
D + +++M ++V+Y+ LI+ + + A+ + +K IAPD+ YNS+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I KAK EAR L EM +NG+ P+ +Y ++ Y++ F A EM +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
+ C +I+ Y + V E + SM GI + +Y L+ +++ +A
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+FR M+ KG+ +V +Y +IN + K +KA+++ EM G+ PN I Y+ ++ +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNI 494
++G++++A L ++ G+ + V Y T+I Y ++G +A A RL E+K PD+
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
T + R VE A +F G + + F +IN + K EV ++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 555 REVGYF-----PDSNVIALVLNAFGKLREFEKADALYSQIHD 591
+ G F P+ ++++ K E A L+ Q+ +
Sbjct: 793 MD-GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 227/503 (45%), Gaps = 27/503 (5%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A L + M +GL P +YTY LI K L+ + L +M+ VS D YS LI+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
K + A + + + I Y+ I V K + +A+ L M +G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID--VYGQL--HMVEEG 341
+Y++L+ Y + + + EM NI+I YG + M G
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKR---------NIVISPYTYGTVVKGMCSSG 431
Query: 342 D-----RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYN 396
D + M G PNVV Y TL++ + ++ FG+A+ + + M+++G+ ++ YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
++I K+ ++A + + EM NG++PNA TY IS + +A + A +++R
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRETAIMVLARARRVEEA 512
GV ++VL +I Y + G V A + ++ + D + L + +V++A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
+FR+ G D+ +G +IN +S+ +F++M E G P+ + ++L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 573 FGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNPNIN 631
F + E EKA L ++ +G + P+ V + ++ Y D LF+++ +
Sbjct: 672 FCRSGEIEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 632 KKELHLVVSGIYERADRLNDASR 654
V + + + RLND R
Sbjct: 731 D---SFVYTTLVDGCCRLNDVER 750
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 185/409 (45%), Gaps = 45/409 (11%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
LS+ A + L + E L P+ F Y + + A ++ A EMR+ G+ P
Sbjct: 497 LSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 181 DRYTYSTLITHFGKHG-------------------------LLDSSLF----------WL 205
++ + LI + K G +L + LF
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
++M ++ D+ Y LI KLG+ KA SIF + + P++I YN ++ F ++
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+A+ LL EM G+ P+ V+Y T++ Y + EA +F EM D
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR---VYGESELFGEAIHLFRL 382
++D +L+ VE +F + +K G + +N L+ +G++EL E ++ RL
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLN--RL 792
Query: 383 MQ---KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
M + + N VTYN MI+ K E A L +MQN + P ITY+++++ ++K
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
G+ +F + ++G++ D ++Y +I A+ + G+ A L+ ++
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 194/492 (39%), Gaps = 95/492 (19%)
Query: 261 VFGKAKLFREARL-------LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
+F K FR A L L + M G+ P +Y L+ +R +A S+ EM
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 314 NDAKCPLDLTTCNIMID----------VYGQLH-------------------------MV 338
+ LD T +++ID G +H ++
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK------------ 386
E+ LF M G+ P +Y +L+ Y + + L M+K+
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 387 -----------------------GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
G + NVV Y T+I + ++ A +++EM+ GI
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
P+ Y+++I KA ++D A ++ +G++ + Y I Y A A A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 484 LLHELKRPDNIPRETAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYS 539
+ E++ +P + L + +V EA +R G + D + ++N
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 540 RNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE 599
+N K + E+F +MR G PD +++N F KL +KA +++ ++ +EG + P+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-LTPNV 662
Query: 600 VHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELH-------LVVSGIYERADRLNDA 652
+ + M L G +E E LD ++ K LH ++ G Y ++ L +A
Sbjct: 663 IIYNM--LLGGFCRSGEIEKAKELLDE---MSVKGLHPNAVTYCTIIDG-YCKSGDLAEA 716
Query: 653 SRIMNRMNHKAI 664
R+ + M K +
Sbjct: 717 FRLFDEMKLKGL 728
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 55/313 (17%)
Query: 89 ASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVF 148
+SI E+ L + +YN ++ R + ++A LLD ++ K L+ P+
Sbjct: 647 SSIFDEMVEEGLTPNVIIYN-------MLLGGFCRSGEIEKAKELLDEMSVKGLH-PNAV 698
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL-------------ITHFG-- 193
Y ++ ++ A LFDEM+ +GL PD + Y+TL IT FG
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 194 KHGLLDSS------LFWLQQMEQDNVSGDL-----------------VLYSNLIELSRKL 230
K G S+ + W+ + + + ++ V Y+ +I+ K
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL--LLQEMRDNGVCPDTV 288
G+ A +F +++ +++ P +I Y S++N G K+ R A + + E G+ PD +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLN--GYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 289 SYSTLLAIYVDNERFVEALSVFSEM-----NDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
YS ++ ++ +AL + +M D C L ++TC ++ + ++ +E ++
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 344 LFWSMRKMGIEPN 356
+ +M ++ P+
Sbjct: 937 VMENMVRLQYIPD 949
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 151/376 (40%), Gaps = 68/376 (18%)
Query: 282 GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
G D V + L Y+ EA+ VFS + L+ C +++D + + ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD-- 203
Query: 342 DRLFWSMRKMGIEPNVV----SYNTLLRVY--------GESELFGE-------------A 376
LFW + K +E NVV +Y+ L+ + G+ LF A
Sbjct: 204 --LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 377 IHLFRLMQKKGVQQNVVTYNTMI-------------------NIYGKSLEH--------- 408
+ L M KG+ TY+ +I + G SL++
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 409 -------EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+ A L+ EM ++GI Y I + K G +++A LF + +SG+
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE----TAIMVLARARRVEEATWVFR 517
Y ++I Y R V LL E+K+ + + T + + + ++ A + +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLR 577
+ A+G ++ ++ +I + +N ++ + + V ++M+E G PD ++ K +
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 578 EFEKADALYSQIHDEG 593
++A + ++ + G
Sbjct: 502 RMDEARSFLVEMVENG 517
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 230/466 (49%), Gaps = 16/466 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+VF YN+++ + + A GLF+EM+ RGL PD TY+++I FGK G LD ++ +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++M+ D++ Y+ LI K G + + +K + + P++++Y+++++ F K
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ ++A +MR G+ P+ +Y++L+ +A + +EM ++ T
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ID ++E + LF M G+ PN+ SYN L+ + +++ A+ L ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 385 KKGVQQNVVTYNTMINIYG-KSLEH-EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+G++ +++ Y T I+G SLE E A ++ EM+ GI+ N++ Y+T++ + K+G
Sbjct: 500 GRGIKPDLLLYGTF--IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
L +++ +++ V + +I + LV+ A + + + AI
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 503 -----LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF---EKM 554
L + +VE AT +F Q G V D + + +L N K NV+E +KM
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY---TSLMDGNFKQGNVLEALALRDKM 674
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV 600
E+G D ++ + +KA + ++ EG + PDEV
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG-IHPDEV 719
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 211/456 (46%), Gaps = 7/456 (1%)
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
F +M++ + P + + L+ F K G D + + M + Y+ +I+ K
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
GD A +F +K + PD + YNSMI+ FGK + +EM+D PD ++
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y+ L+ + + L + EM ++ + + ++D + + M+++ + + MR
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
++G+ PN +Y +L+ + +A L M + GV+ NVVTY +I+ + +
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+A L +M G+ PN +Y+ +I + KA +DRA L +L+ G++ D +LY T I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 470 VAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
+ AK +++E+K + +++ T + ++ E + +
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKM-REVGYFPDSNVIALVLNAFGKLREFEKADA 584
+ F +I+ +NK + V+ F ++ + G ++ + +++ K + E A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 585 LYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESL 620
L+ Q+ +G V PD + L + G K ++E+L
Sbjct: 635 LFEQMVQKGLV-PDRTAYTSL-MDGNFKQGNVLEAL 668
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 222/492 (45%), Gaps = 19/492 (3%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
L+ + D + A W + + SV +Y +V + A+ ++ A+ + EM
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 180 PDRY-----TYSTLITHFGKH----------GLLDSSLFWLQQMEQDNVSGDLVLYSNLI 224
D + T + + FG G+L+ ++ +M++ V + L+
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 234
Query: 225 ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
KLG F + + P + YN MI+ K AR L +EM+ G+
Sbjct: 235 HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
PDTV+Y++++ + R + + F EM D C D+ T N +I+ + + + G
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
+ M+ G++PNVVSY+TL+ + + + +AI + M++ G+ N TY ++I+ K
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
A L EM G++ N +TY+ +I A ++ A LF K+ ++GV +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAF 520
Y +I + +A + A LL+ELK +PD + T I L ++E A V +
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
G + ++ +++ Y ++ T + + ++M+E+ ++++ K +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 581 KADALYSQIHDE 592
KA +++I ++
Sbjct: 595 KAVDYFNRISND 606
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 153/376 (40%), Gaps = 71/376 (18%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V +Y+ ++ + A + +MR+ GL P+ YTY++LI K G L +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+M Q V ++V Y+ LI+ +A +F ++ + + P+L +YN++I+ F K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 265 AKLFREARLLLQEMRDNGVCPD-----------------------------------TVS 289
AK A LL E++ G+ PD ++
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 290 YSTLLAIYVDNERFVEALSVFSEMN---------------DAKCPLDLTTCNI------- 327
Y+TL+ Y + E L + EM D C L + +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 328 --------------MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
MID + + VE LF M + G+ P+ +Y +L+ +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA+ L M + G++ +++ Y +++ + +KA + ++EM GI P+ + ++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 434 ISIWEKAGKLDRAAML 449
+ + G +D A L
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
RAL LL+ + + + P + Y + + ++ A + +EM++ G+ + Y+T
Sbjct: 489 DRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS- 246
L+ + K G L L +M++ ++ +V + LI+ K SKA+ F R+
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
+ + + +MI+ K A L ++M G+ PD +Y++L+ +EA
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
L++ +M + LDL ++ + +++ M GI P+ V ++L+
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 367 YGESELFGEAIHL 379
+ E EA+ L
Sbjct: 728 HYELGCIDEAVEL 740
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 230/523 (43%), Gaps = 43/523 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P Y+ ++ RA QW A L D+M + +AP R TY+ LI G G +L
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++M + V DLV ++ ++ + YSKA+S F +K + + PD +N +I K
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 265 AKLFREARLLLQEMRDN-------------------------------------GVCPDT 287
+A L MR+ G+ P+
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
VSY+ L+ Y + ALSV ++ D+ + +++ YG+ + +F
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
MRK +PNVV+YN L+ YG + EA+ +FR M++ G++ NVV+ T++ +S +
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
++ Q+ GI N Y++ I + A +L++A L+Q +R V+ D V +
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 468 MIVAYERAGLVAHAKRLLHELKRPDNIP-----RETAIMVLARARRVEEATWVFRQAFAA 522
+I R A L E++ +IP + + ++ +V EA +F Q A
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
G D+ + M++ Y+ ++K+ E+F +M G PDS + ++ AF K +
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Query: 583 DALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLD 625
L + ++ F V F++ S +++ L + +D
Sbjct: 523 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 565
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 236/485 (48%), Gaps = 8/485 (1%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME 209
YN+++R R A GLF EM++ PD TY LI G+ G ++ + M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFR 269
+ ++ Y+NLI G++ +A+ + ++ + + PDL+ +N +++ + + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND--AKCPLDLTTCNI 327
+A + M+ V PDT +++ ++ + +AL +F+ M + A+C D+ T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
++ +Y +E +F +M G++PN+VSYN L+ Y + G A+ + +++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+ +VV+Y ++N YG+S + KA + M+ +PN +TY+ +I + G L A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNI---PRETAIMVL 503
+F+++ G++ + V T++ A R+ + +L + R N+ +AI
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
A +E+A +++ D F +I+ R KY + ++M ++
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFE 622
V + VL A+ K + +A+++++Q+ GC PD + + ML Y A + + LF
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE-PDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 623 KLDSN 627
++++N
Sbjct: 493 EMEAN 497
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 150/310 (48%), Gaps = 10/310 (3%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
AYN + + + A + A L+ MR++ + D T++ LI+ + ++ +L++M
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
E ++ +YS+++ K G ++A SIF ++K + PD+IAY SM++ + ++ +
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+A L EM NG+ PD+++ S L+ + + + M + + P T +
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF---TGAVF 541
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY-----NTLLRVYGESELFGEAIHLFRLM 383
+++ + ++E R ++ M +P + S N +L ++G+S + LF +
Sbjct: 542 FEIFSACNTLQEWKRAIDLIQMM--DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKI 599
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
GV N+ TY ++ K +++ M GIQP+ Y IIS E++ +
Sbjct: 600 IASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI 659
Query: 444 DRAAMLFQKL 453
+ ++ QKL
Sbjct: 660 EFEPLIRQKL 669
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 167/417 (40%), Gaps = 71/417 (17%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL++L I + + P V +Y +L + R++Q A +F MR+ P+ TY+ LI
Sbjct: 242 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+G +G L ++ +QMEQD + ++V L+ + ++ + ++ I
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS-------------------- 289
+ AYNS I + A +A L Q MR V D+V+
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 290 ---------------YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
YS++L Y + EA S+F++M A C D+ M+ Y
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES------------------------ 370
+ LF M GIEP+ ++ + L+R + +
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAV 540
Query: 371 --ELFG---------EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
E+F AI L ++M ++ N M++++GKS + E L ++
Sbjct: 541 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+G+ N TY+ ++ G + + + + +G+Q +Y+ +I ER+
Sbjct: 601 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSA 657
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 141/316 (44%), Gaps = 6/316 (1%)
Query: 284 CPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
C Y+ ++ ++ + +A +F EM C D T + +I+ +G+
Sbjct: 8 CARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMN 67
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
L M + I P+ +YN L+ G S + EA+ + + M GV ++VT+N +++ Y
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI--D 461
++ KA + + M+ ++P+ T++ II K G+ +A LF +R + D
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 462 QVLYQTMIVAYERAGLVAHAK----RLLHELKRPDNIPRETAIMVLARARRVEEATWVFR 517
V + +++ Y G + + + ++ E +P+ + + A A V
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLR 577
G + D+ + C++N Y R+++ EVF MR+ P+ +++A+G
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 578 EFEKADALYSQIHDEG 593
+A ++ Q+ +G
Sbjct: 308 FLAEAVEIFRQMEQDG 323
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 248/512 (48%), Gaps = 53/512 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAK-QWHLAHGLFDEMRQ 175
++S R + A+++ + + E L P++ YN V+ + ++ FDEM++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G+ PDR T+++L+ + GL +++ +M + D+ Y+ L++ K G
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A I A++ I P++++Y+++I+ F KA F EA L EMR G+ D VSY+TLL+
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
IY R EAL + EM D+ T N ++ YG+ +E ++F M++ + P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N+++Y+TL+ Y + L+ EA+ +FR + G++ +VV Y+ +I+ K+ A +LI
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
EM GI PN +TY++II + ++ +DR+A Y
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSA-----------------------DYSNG 609
Query: 476 GLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMI 535
G + + L L + RV + +F Q E N+ + C
Sbjct: 610 GSLPFSSSALSALTETE-------------GNRVIQ---LFGQLTT--ESNNRTTKDCEE 651
Query: 536 NLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCV 595
+ ++ + ++EVF KM ++ P+ + +LNA + FE A L ++ +
Sbjct: 652 GM----QELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----L 703
Query: 596 FPDEVHFQMLSLY-GARKD-FTMVESLFEKLD 625
F ++V+ + L G R++ + +SLF+K++
Sbjct: 704 FDNKVYGVVHGLLMGQRENVWLQAQSLFDKVN 735
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 13/418 (3%)
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL----FWLQQMEQDNVSGDLVLYSN 222
H L + D TY +I G D ++ F +++ + N G L S
Sbjct: 183 HSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLA--SA 238
Query: 223 LIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
+I + G + A IF A + A++++I+ +G++ L EA + M++ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 283 VCPDTVSYSTLL-AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
+ P+ V+Y+ ++ A F + F EM D T N ++ V + + E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
LF M IE +V SYNTLL + A + M K + NVV+Y+T+I+
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+ K+ ++A NL EM+ GI + ++Y+T++SI+ K G+ + A + +++ S G++ D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFR 517
V Y ++ Y + G K++ E+KR P+ + T I ++ +EA +FR
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
+ +AG D+ ++ +I+ +N + V + ++M + G P+ +++AFG+
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
MI G+ V R+F + G V +++ L+ YG S L EAI +F M++ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 388 VQQNVVTYNTMINIYGK-SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
++ N+VTYN +I+ GK +E ++ EMQ NG+QP+ IT+++++++ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KR--PDNIPRETAIMV 502
LF ++ + ++ D Y T++ A + G + A +L ++ KR P+ + T I
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
A+A R +EA +F + G D + ++++Y++ + +++ +M VG D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+L +GK ++++ +++++ E V P+ + + L
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTL 520
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 238/520 (45%), Gaps = 45/520 (8%)
Query: 91 ISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAY 150
IS + Q L V LY + +++ R + ALALL + K Y PS+
Sbjct: 105 ISLGEKMQRLEIVHGLY-----TYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTL 158
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
+ +L K+ A L D+M + G PD T++TLI H ++ + +M Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
+LV Y ++ K GD A+++ +++A+ I D++ +N++I+ K + +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L +EM G+ P+ V+YS+L++ R+ +A + S+M + K +L T N +ID
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
+ + E ++L+ M K I+P++ +YN+L+ + + +A +F M K
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQ------------------------------- 419
+VVTYNT+I + KS E T L +EM
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 420 ----NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++G+ P+ +TYS ++ GKL++A +F ++ S +++D +Y TMI +A
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 476 GLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
G V L L +P+ + T I L R ++EA + ++ G + + +
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
+I + R+ E+ +MR + D++ I LV N
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 204/444 (45%), Gaps = 4/444 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+S Y +LRN L + A GLF M + P ++ L++ K D +
Sbjct: 46 FSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 105
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
++M++ + L Y+ LI + S A+++ ++ P ++ +S++N +
Sbjct: 106 SLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K +A L+ +M + G PDT++++TL+ + + EA+++ M C +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T ++++ + + L M IE +VV +NT++ + +A++LF+
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M+ KG++ NVVTY+++I+ A+ L+ +M I PN +T++ +I + K GK
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRET 498
A L+ + + D Y +++ + + AK++ + PD + T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I +++RVE+ T +FR+ G V D + +I + N +VF++M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 559 YFPDSNVIALVLNAFGKLREFEKA 582
PD +++L+ + EKA
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKA 489
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 234/528 (44%), Gaps = 7/528 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ +N +L + + K++ + L ++M++ + YTY+ LI F + + +L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + +V S+L+ S A+++ ++ PD I + ++I+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L+ M G P+ V+Y ++ AL++ ++M AK D+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +ID + V++ LF M GI PNVV+Y++L+ + +A L M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+K + N+VT+N +I+ + K + +A L +M I P+ TY+++++ + +LD
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAI 500
+A +F+ + S D V Y T+I + ++ V L E+ D + T I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
L + A VF+Q + G DI + +++ N K +EVF+ M++
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVES 619
D + ++ K + + L+ + +G V P+ V + M+S +++ +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 620 LFEKL-DSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIGN 666
L +K+ + P N + ++ D+ A I + + +G+
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 164/330 (49%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L W A LL + EK + +P++ +N ++ ++ ++ A L+D+M +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD +TY++L+ F H LD + + M + D+V Y+ LI+ K
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+F + + D + Y ++I A+ + ++M +GV PD ++YS LL
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+N + +AL VF M ++ LD+ MI+ + V++G LF S+ G++PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+YNT++ L EA L + M++ G N TYNT+I + + + + LI+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ +A T + ++ G+LD++
Sbjct: 600 EMRSCRFVGDASTIGLVANMLHD-GRLDKS 628
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 177/411 (43%), Gaps = 17/411 (4%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
AI +F + S P ++ +N +++ K K F L ++M+ + +Y+ L+
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + AL++ +M + T + +++ Y + + L M +MG P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ +++ TL+ EA+ L M ++G Q N+VTY ++N K + + A NL+
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+M+ I+ + + ++TII K +D A LF+++ + G++ + V Y ++I
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 476 GLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
G + A +LL ++ P+ + I + + EA ++ DI +
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
++N + + + ++FE M FPD ++ F K + E L+ ++
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 592 EGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGI 642
G V D V + T+++ LF D + N K +V G+
Sbjct: 429 RGLV-GDTVTYT-----------TLIQGLFHDGDCD-NAQKVFKQMVSDGV 466
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 224/473 (47%), Gaps = 33/473 (6%)
Query: 100 LHAVMSL-YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVL 158
L VM L Y + ++ L E A+ L+D + E P V YN ++ +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC-QPDVVTYNSIVNGIC 204
Query: 159 RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV 218
R+ LA L +M +R + D +TYST+I + G +D+++ ++ME + +V
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
Y++L+ K G ++ + + + I P++I +N +++VF K +EA L +EM
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
G+ P+ ++Y+TL+ Y R EA ++ M KC D+ T +I Y + V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTM 398
++G ++F ++ K G+ N V+Y+ L++ + +S A LF+ M GV +V+TY +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 399 INIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
++ + + EKA + +++Q + + + Y+TII K GK++ A LF L GV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 459 QIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQ 518
+ + + Y MI + G ++ A LL +++ N P + L RA
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA------------ 552
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
+ R+ T ++ E+M+ G+ D++ I +V++
Sbjct: 553 -------------------HLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 162/327 (49%), Gaps = 3/327 (0%)
Query: 117 MVSLLSRETDWQR-ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
+V L + W AL L D ++ + + P+V +NV+L ++ + A+ L+ EM
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIV--PNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
RG++P+ TY+TL+ + L + L M ++ S D+V +++LI+ +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+ +F + + + + Y+ ++ F ++ + A L QEM +GV PD ++Y LL
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
DN + +AL +F ++ +K L + +I+ + VE+ LF S+ G++P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
NV++Y ++ + EA L R M++ G N TYNT+I + + + + LI
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGK 442
+EM++ G +A + +I + A K
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 185/401 (46%), Gaps = 14/401 (3%)
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
D ++ Q+M + LV +S + ++ + +L+ + IA ++ N M
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
IN F + A +L ++ G PDT +++TL+ + EA+ + M + C
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDR-----LFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
D+ T N +++ + GD L M + ++ +V +Y+T++
Sbjct: 190 QPDVVTYNSIVN-----GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
AI LF+ M+ KG++ +VVTYN+++ K+ + L+++M + I PN IT++ +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR--- 490
+ ++ K GKL A L++++ + G+ + + Y T++ Y ++ A +L + R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 491 -PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
PD + + I +RV++ VFR G V + + ++ + ++ K E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
+F++M G PD ++L+ + EKA ++ +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 230/496 (46%), Gaps = 16/496 (3%)
Query: 146 SVFAYNVVLRNVLRAKQWHL----AHGLFDEM-RQRGLAPDRYTYSTLITHFGKHGLLDS 200
S+ NV R LR+ + A LF EM R R L P +S + + +
Sbjct: 48 SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNL 106
Query: 201 SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI- 259
L + +Q+E + ++ ++ + +I + A S+ ++ PD +N++I
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+F + K+ EA +L+ M +NG PD V+Y++++ + AL + +M +
Sbjct: 167 GLFLEGKV-SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D+ T + +ID + ++ LF M GI+ +VV+YN+L+R ++ + + L
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
+ M + + NV+T+N +++++ K + ++A L +EM GI PN ITY+T++ +
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA 499
+L A + + + D V + ++I Y V ++ + + +
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 500 IMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
+L ++ +++ A +F++ + G + D+ +G +++ N K +E+FE ++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFT 615
+ + ++ K + E A L+ + +G V P+ + + ++ + G K +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG-VKPNVMTYTVM-ISGLCKKGS 523
Query: 616 MVES--LFEKLDSNPN 629
+ E+ L K++ + N
Sbjct: 524 LSEANILLRKMEEDGN 539
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 202/413 (48%), Gaps = 6/413 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + E Y P + ++ + + + A L + M +G PD TY +I
Sbjct: 164 AVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G D +L L +ME+ + D+V+Y+ +I+ K A +F +++ I
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+ YN +I+ + +A LL +M + + PD V ++ L+ +V + VEA +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 310 FSEMNDAK-CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ EM +K C D+ N +I + + VEEG +F M + G+ N V+Y TL+ +
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
++ A +F+ M GV +++TYN +++ + E A + + MQ ++ + +
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
TY+T+I KAGK++ LF L GV+ + V Y TM+ + R GL A L E+
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 489 KRPDNIPRETA--IMVLARARRVEEATW--VFRQAFAAGEVNDISVFGCMINL 537
K +P ++ AR R +EA + ++ + G D S FG + N+
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 243/503 (48%), Gaps = 17/503 (3%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQ--------LSIRFMVSLLSRETDWQRALAL 133
++ +LL++I+ + V+SL Q Q + ++ R + ALA+
Sbjct: 76 VEFSKLLSAIAKMN---KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
L + K Y PS+ N +L + A L D+M + G PD T++TL+
Sbjct: 133 LGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
+H ++ +++M DLV Y +I K G+ A+++ +++ I D++
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
YN++I+ K K +A L +M G+ PD +Y+ L++ + R+ +A + S+M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG-IEPNVVSYNTLLRVYGESEL 372
+ DL N +ID + + + E ++L+ M K P+VV+YNTL++ + + +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
E + +FR M ++G+ N VTY T+I+ + ++ + + A + ++M ++G+ P+ +TY+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK--- 489
++ G ++ A ++F+ ++ +++D V Y TMI A +AG V L L
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 490 -RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV 548
+P+ + T + R EEA +F + G + + + +I R+
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 549 EVFEKMREVGYFPDSNVIALVLN 571
E+ ++MR G+ D++ LV N
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTN 574
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 38/366 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ L + + AL LL+ + EK V YN ++ + + K A LF++M +
Sbjct: 221 VINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ PD +TY+ LI+ +G + L M + N++ DLV ++ LI+ K G +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 237 ISIFARL-KASSIAPDLIAYNSMINVFGKAK-------LFRE------------------ 270
++ + K+ PD++AYN++I F K K +FRE
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 271 ----------ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
A+++ ++M +GV PD ++Y+ LL +N AL VF M L
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D+ T MI+ + VE+G LF S+ G++PNVV+Y T++ + L EA LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M++ G N TYNT+I + + + LI+EM++ G +A T+ + ++
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD- 578
Query: 441 GKLDRA 446
G+LD++
Sbjct: 579 GRLDKS 584
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 6/463 (1%)
Query: 155 RNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS 214
R VL+ + A GLF +M + P +S L++ K D + +QM+ +S
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 215 GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
+L YS I + S A++I ++ P ++ NS++N F EA L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
+ +M + G PDTV+++TL+ + + EA+++ M C DL T +I+ +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
+ L M K IE +VV YNT++ + + +A LF M+ KG++ +V T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL- 453
YN +I+ A+ L+ +M I P+ + ++ +I + K GKL A L+ ++
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRV 509
+S D V Y T+I + + V + E+ + + + T I +AR
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
+ A VF+Q + G DI + +++ N + VFE M++ D +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 570 LNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARK 612
+ A K + E L+ + +G V P+ V + + RK
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRK 509
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 216/446 (48%), Gaps = 7/446 (1%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
++PSV+ N +L +V+++ + EM +R + PD T++ LI G + S
Sbjct: 194 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 253
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+ +Q+ME+ + +V Y+ ++ K G + AI + +K+ + D+ YN +I+
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
++ + LLL++MR + P+ V+Y+TL+ + + + + A + +EM +
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T N +ID + +E ++F+ M G+ P+ VSY LL ++ F A +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M++ GV +TY MI+ K+ ++A L+ EM +GI P+ +TYS +I+ + K G+
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR----LLHELKRPDNIPRET 498
A + ++ G+ + ++Y T+I R G + A R ++ E D+
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ L +A +V EA R + G + + F C+IN Y + + VF++M +VG
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 559 YFPDSNVIALVLNAF---GKLREFEK 581
+ P +L G LRE EK
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEK 639
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 203/454 (44%), Gaps = 6/454 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+PSV Y++++R LR + +F M G P YT + ++ K G S
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+L++M + + D+ ++ LI + G + K+ + +++ S AP ++ YN++++ +
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K F+ A LL M+ GV D +Y+ L+ + R + + +M +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T N +I+ + V +L M G+ PN V++N L+ + F EA+ +F +M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ KG+ + V+Y +++ K+ E + A M+ NG+ ITY+ +I K G L
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETA 499
D A +L ++ G+ D V Y +I + + G AK ++ + R P+ I T
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I R ++EA ++ G D F ++ + K E M G
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
P++ ++N +G E KA +++ ++ G
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 209/485 (43%), Gaps = 34/485 (7%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY 183
E +++ AL + + K L +PS +Y V+L + + ++ LA G + M++ G+ R
Sbjct: 386 EGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY+ +I K+G LD ++ L +M +D + D+V YS LI K+G + A I R+
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
++P+ I Y+++I + +EA + + M G D +++ L+ +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
EA M + + + +I+ YG + +F M K+G P +Y +L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
L+ + EA + + + V YNT++ KS KA +L EM I
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG-VQIDQVLYQTMIVAYERAGLVAHAK 482
P++ TY+++IS + GK A + ++ + G V ++V+Y + +AG K
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG---QWK 741
Query: 483 RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
++ ++ DN+ G DI MI+ YSR
Sbjct: 742 AGIYFREQMDNL----------------------------GHTPDIVTTNAMIDGYSRMG 773
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF 602
K ++ +M P+ ++L+ + K ++ + LY I G + PD++
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTC 832
Query: 603 QMLSL 607
L L
Sbjct: 833 HSLVL 837
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/609 (21%), Positives = 254/609 (41%), Gaps = 79/609 (12%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
+ ++++L E ++++ L+ + EK+ Y+P++ YN VL + ++ A L D
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M+ +G+ D TY+ LI + + L+ M + + + V Y+ LI G
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
A + + + ++P+ + +N++I+ F+EA + M G+ P VSY
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
LL N F A + M + T MID + ++E L M K G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 353 IEPNVVSYNTLL-----------------RVY--GESE----------------LFGEAI 377
I+P++V+Y+ L+ R+Y G S EAI
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII--- 434
++ M +G ++ T+N ++ K+ + +A ++ M ++GI PN +++ +I
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 435 ----------SIWE----------------------KAGKLDRAAMLFQKLRSSGVQIDQ 462
S+++ K G L A + L + +D
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQ 518
V+Y T++ A ++G +A A L E+ + PD+ + I L R + A ++
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 519 AFAAGEV--NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
A A G V N + ++ C ++ + ++ + E+M +G+ PD +++ + ++
Sbjct: 714 AEARGNVLPNKV-MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNI-NKKEL 635
+ EK + L ++ ++ + +L Y RKD + L+ + N + +K
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 636 HLVVSGIYE 644
H +V GI E
Sbjct: 833 HSLVLGICE 841
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 197/449 (43%), Gaps = 45/449 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ +++ ++ + + A +FDEM + G P +TY +L+ K G L + +
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN---- 260
L+ + + D V+Y+ L+ K G+ +KA+S+F + SI PD Y S+I+
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 261 --------VFGKAK-------------------LFR----EARLLLQEMRDN-GVCPDTV 288
+F K +F+ +A + +E DN G PD V
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+ + ++ Y + + + EM + +LTT NI++ Y + V L+ S+
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
GI P+ ++ ++L+ ES + + + + +GV+ + T+N +I+ + E
Sbjct: 821 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 880
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A +L++ M + GI + T ++S+ + + + M+ ++ G+ + Y +
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940
Query: 469 IVAYERAG-----LVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
I R G V + + H++ P N+ + LA+ + +EAT + R
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKIC-PPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFE 552
V I+ F +++L +N NV+E E
Sbjct: 1000 LVPTIASFTTLMHLCCKNG---NVIEALE 1025
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 160/395 (40%), Gaps = 13/395 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ Y + + +A QW ++M G PD T + +I + + G ++ +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M N +L Y+ L+ K D S + ++ + + I PD + +S++ +
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ + +L+ GV D +++ L++ N A + M LD T
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY----NTLLRVYGESELFGEAIHLF 380
C+ M+ V + H +E + M K GI P Y N L RV F +
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF---VVKE 958
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
++ K NV + M+ K + ++AT L++ M + P +++T++ + K
Sbjct: 959 EMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
G + A L + + G+++D V Y +I G +A A L E+K + T
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Query: 501 MVLARARRVEEATW-----VFRQAFAAGEVNDISV 530
L R E + + + A G + +S+
Sbjct: 1078 KALIRGLLARETAFSGADIILKDLLARGFITSMSL 1112
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 235/520 (45%), Gaps = 45/520 (8%)
Query: 91 ISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAY 150
IS + Q L +LY + +++ R + ALALL + K Y PS+
Sbjct: 30 ISLGEKMQRLGISHNLY-----TYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTL 83
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
+ +L K+ A L D+M + G PD T++TLI H ++ + +M Q
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
+LV Y ++ K GD A ++ +++A+ I D++ +N++I+ K + +
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L +EM G+ P+ V+YS+L++ R+ +A + S+M + K +L T N +ID
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
+ + E ++L M K I+P++ +YN+L+ + + +A +F M K
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQ------------------------------- 419
++ TYNT+I + KS E T L +EM
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 420 ----NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++G+ P+ +TYS ++ GKL++A +F ++ S +++D +Y TMI +A
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 476 GLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
G V L L +P+ + T I L R ++EA + ++ G + D +
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
+I + R+ E+ +MR + D++ I LV N
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 4/416 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+F +N +L + + K++ L L ++M++ G++ + YTY+ LI F + + +L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + +V S+L+ S A+++ ++ PD I + ++I+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L+ M G P+ V+Y ++ A ++ ++M AK D+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +ID + V++ LF M GI PNVV+Y++L+ + +A L M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+K + N+VT+N +I+ + K + +A L +M I P+ TY+++I+ + +LD
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAI 500
+A +F+ + S D Y T+I + ++ V L E+ D + T I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
L + A VF+Q + G DI + +++ N K +EVF+ M++
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 162/330 (49%), Gaps = 2/330 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L W A LL + EK + +P++ +N ++ ++ ++ A L D+M +R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD +TY++LI F H LD + + M + DL Y+ LI+ K
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+F + + D + Y ++I A+ + ++M +GV PD ++YS LL
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+N + +AL VF M ++ LD+ MI+ + V++G LF S+ G++PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+YNT++ L EA L + M++ G + TYNT+I + + + + LI+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
EM++ +A T + ++ G+LD++
Sbjct: 525 EMRSCRFVGDASTIGLVANMLHD-GRLDKS 553
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 177/423 (41%), Gaps = 44/423 (10%)
Query: 220 YSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR 279
++ L+ K+ + IS+ +++ I+ +L YN +IN F + A LL +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 280 DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
G P V+ S+LL Y +R +A+++ +M + D T +I +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 340 EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
E L M + G +PN+V+Y ++ + A +L M+ ++ +VV +NT+I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+ K + A NL +EM+ GI+PN +TYS++IS G+ A+ L + +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQA 519
+ V + +I A+ + G A++L ++ + P
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP------------------------ 288
Query: 520 FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREF 579
DI + +IN + + + ++FE M FPD + ++ F K +
Sbjct: 289 -------DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 580 EKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVV 639
E L+ ++ G V D V + T+++ LF D + N K +V
Sbjct: 342 EDGTELFREMSHRGLV-GDTVTYT-----------TLIQGLFHDGDCD-NAQKVFKQMVS 388
Query: 640 SGI 642
G+
Sbjct: 389 DGV 391
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 12/272 (4%)
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
++ +N +++ K + + +L ++MQ GI N TY+ +I+ + + ++ A L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARA 506
K+ G + V +++ Y ++ A L+ ++ RPD I T I L
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
+ EA + + G ++ +G ++N + + KM D +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 567 ALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF----QMLSLYGARKDFTMVESLFE 622
++++ K R + A L+ ++ +G + P+ V + L YG D + + S
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 623 KLDSNPNI---NKKELHLVVSGIYERADRLND 651
+ NPN+ N V G + A++L+D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 206/426 (48%), Gaps = 12/426 (2%)
Query: 83 DMDELLASISSTQNEQELHAVMSLYNQRQL--------SIRFMVSLLSRETDWQRALALL 134
D LL++IS + + V+ L+ Q Q+ + +++ R + AL+ L
Sbjct: 83 DFSRLLSAISKMK---KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
+ K + PS+ + +L R + + A +FD+M G P+ Y+T+I K
Sbjct: 140 GKM-IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 195 HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIA 254
+D++L L +ME+D + D+V Y++LI G +S A + + + I PD+
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
+N++I+ K EA +EM + PD V+YS L+ R EA +F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
C D+ T +I+I+ Y + VE G +LF M + G+ N V+Y L++ Y +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A +FR M GV N++TYN +++ + + EKA ++ +MQ NG+ + +TY+ II
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
KAG++ A ++ L G+ D Y TM++ + GL A L ++K +
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 495 PRETAI 500
P E +
Sbjct: 499 PNECYV 504
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 196/453 (43%), Gaps = 41/453 (9%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME 209
Y +LRN +R + + LF M Q P +S L++ K D ++ +QM+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF------- 262
+ +L + L+ + S A+S ++ P ++ + S++N F
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 263 ----------------------------GKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
K+K A LL M +G+ PD V+Y++L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+ + R+ +A + S M + D+ T N +ID + V E + + M + ++
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P++V+Y+ L+ EA +F M KG +VVTY+ +IN Y KS + E L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
EM G+ N +TY+ +I + +AGKL+ A +F+++ GV + + Y ++
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 475 AGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
G + A +L ++++ D + I + +A V +A ++ G + DI
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 531 FGC-MINLYSRNKKYTNVVEVFEKMREVGYFPD 562
+ M+ LY + + +F KM+E G P+
Sbjct: 469 YTTMMLGLYKKGLR-READALFRKMKEDGILPN 500
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 192/443 (43%), Gaps = 15/443 (3%)
Query: 198 LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
LD SL M Q + +S L+ K+ Y I ++ +++ I +L N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
++N F + A L +M G P V++ +LL + +R +AL +F +M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
++ N +ID + V+ L M K GI P+VV+YN+L+ S + +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ M K+ + +V T+N +I+ K +A +EM + P+ +TYS +I
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE 497
+LD A +F + S G D V Y +I Y ++ V H +L E+ + +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 498 TAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+L RA ++ A +FR+ G +I + +++ N K + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF--QMLSLY--G 609
M++ G D +++ K E A +Y ++ +G + PD + ML LY G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG-LMPDIWTYTTMMLGLYKKG 480
Query: 610 ARKDFTMVESLFEKLDSN---PN 629
R++ ++LF K+ + PN
Sbjct: 481 LRRE---ADALFRKMKEDGILPN 500
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 220/485 (45%), Gaps = 51/485 (10%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK--------- 194
SP+VF YN+++R A +A LFD+M +G P+ TY+TLI + K
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 195 --------------------------HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
G + F L +M + S D V Y+ LI+
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K G++ +A+ + A + + P +I Y S+I+ KA A L +MR G+CP+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+Y+TL+ + EA V EMND + T N +I+ + +E+ + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
++ G+ P+VVSY+T+L + S EA+ + R M +KG++ + +TY+++I + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
++A +L +EM G+ P+ TY+ +I+ + G L++A L ++ GV D V Y +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
I + AKRLL +L +++P + L +E + + ++ +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-----IENCSNIEFKSVVS------ 610
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+I + T +VFE M + PD ++++ + + KA LY +
Sbjct: 611 -----LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 589 IHDEG 593
+ G
Sbjct: 666 MVKSG 670
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 227/512 (44%), Gaps = 42/512 (8%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQ-WHLAHGLFDEMR 174
+V SR + +AL+++ + P V +YN VL +R+K+ A +F EM
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ ++P+ +TY+ LI F G +D +L +ME ++V Y+ LI+ KL
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+ + + P+LI+YN +IN + +E +L EM G D V+Y+TL+
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
Y F +AL + +EM + G+
Sbjct: 318 KGYCKEGNFHQALVMHAEM-----------------------------------LRHGLT 342
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P+V++Y +L+ ++ A+ M+ +G+ N TY T+++ + + +A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
++EM +NG P+ +TY+ +I+ GK++ A + + ++ G+ D V Y T++ + R
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 475 AGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
+ V A R+ E+ +PD I + I RR +EA ++ + G D
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
+ +IN Y +++ +M E G PD ++++N K +A L ++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 591 DEGCVFPDEVHFQMLSLYGARKDFTMVESLFE 622
E V P +V + L + +F V SL +
Sbjct: 583 YEESV-PSDVTYHTLIENCSNIEFKSVVSLIK 613
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 232/526 (44%), Gaps = 59/526 (11%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
LL + D L L+W N ++ + + L + + K + A L +++ + L
Sbjct: 55 LLKSQNDQALILKFLNWANPHQFFT--LRCKCITLHILTKFKLYKTAQILAEDVAAKTLD 112
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
+ Y++L+ F Q D ++ +++ +L KA+SI
Sbjct: 113 DE---YASLV-------------FKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSI 156
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKL-FREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
+A P +++YN++++ ++K A + +EM ++ V P+ +Y+ L+ +
Sbjct: 157 VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
AL++F +M C ++ T N +ID Y +L +++G +L SM G+EPN++
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
SYN ++ E + M ++G + VTYNT+I Y K +A + EM
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
+G+ P+ ITY+++I KAG ++RA ++R G+ ++ Y T++ + + G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 479 AHAKRLLHELK---------------------------------------RPDNIPRETA 499
A R+L E+ PD + T
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
+ R+ V+EA V R+ G D + +I + ++ +++E+M VG
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
PD ++NA+ + EKA L++++ ++G V PD V + +L
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-VLPDVVTYSVL 561
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 184/400 (46%), Gaps = 52/400 (13%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y+ +++ ++ +E ++ +AL + + L +PSV Y ++ ++ +A + A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRA 364
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
D+MR RGL P+ TY+TL+ F + G ++ + L++M + S +V Y+ LI
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
G AI++ +K ++PD+++Y+++++ F ++ EA + +EM + G+ PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
T++YS+L+ + + R EA ++ EM P D T +I+ Y +E+ +L
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 347 SMRKMGIEPNVVSYNTLLR------------------VYGES------------------ 370
M + G+ P+VV+Y+ L+ Y ES
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 371 --------------ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+ EA +F M K + + YN MI+ + ++ + KA L +
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRA-AMLFQKLRS 455
EM +G + +T ++ K GK++ +++ LRS
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 223/472 (47%), Gaps = 45/472 (9%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME 209
+N ++ +A + + A LF EM + G+ D T++T+I G HG L + L++ME
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFR 269
+ +S D Y+ L+ L GD A+ + +++ + PD + + +++++ + K+
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
E ++ EM N + D S ++ +YV+ V+A ++F E C L TT +I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-ERFQLDCVLSSTTLAAVI 486
Query: 330 DVYGQLHMVEEGDRLFWSMRKM-GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
DVY + + E + +F+ R M G +V+ YN +++ YG+++L +A+ LF+ M+ +G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 389 QQNVVTYNTMIN-IYGKSLEHEK----------------------------------ATN 413
+ TYN++ + G L E A +
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L + M+ G++PN + Y ++I+ + ++G ++ A F+ + GVQ + ++ ++I AY
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 474 RAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
+ G + A+R+ ++K PD + + + A V EA +F G + IS
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS 726
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF---GKLRE 578
F M+ LY +EV E+MRE G D V+ + G+L E
Sbjct: 727 -FATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/586 (22%), Positives = 251/586 (42%), Gaps = 54/586 (9%)
Query: 61 TTPSPYHRRTRTQQQM-----FLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIR 115
+ P+P R+ + + LD S D++ LAS+ LS +
Sbjct: 71 SKPNPSSRKRKYGGVIPSILRSLDSSTDIETTLASLC-----------------LNLSPK 113
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
LL +T W+R L + + Y P+V YN+VLR + RA +W + EM
Sbjct: 114 EQTVLLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAH 173
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G+ P TY L+ +GK GL+ +L W++ M Q D V + ++ + + G++ +
Sbjct: 174 NGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR 233
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A F A + DL + I+ F K NG V+ L+
Sbjct: 234 ADRFFKGWCAGKVDLDLDS----IDDFPK----------------NGSAQSPVNLKQFLS 273
Query: 296 I---YVDNERFVEALSVFSEMNDA--KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+ V +E F+ +D+ + P +T N +ID+YG+ + + LF M K
Sbjct: 274 MELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLK 333
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G+ + V++NT++ G EA L + M++KG+ + TYN +++++ + + E
Sbjct: 334 SGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEA 393
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A ++++ G+ P+ +T+ ++ I + + + ++ + ++ID+ ++
Sbjct: 394 ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQ 453
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVL----ARARRVEEATWVFRQAFAAGEVN 526
Y GLV AK L + + T V+ + VE T + + +G+ N
Sbjct: 454 MYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRN 513
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
D+ + MI Y + K + + +F+ M+ G +PD + + ++A +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 587 SQIHDEGCVFPDEVHFQMLSLY---GARKDFTMVESLFEKLDSNPN 629
+++ D GC + + M++ Y G D + EK PN
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 183/374 (48%), Gaps = 4/374 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++SL + D + AL I + L+ P + VL + + K + EM +
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLF-PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ D ++ ++ + GL+ + ++ + D V L + +I++ + G + +A
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVYAEKGLWVEA 498
Query: 237 ISIF-ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
++F + S D++ YN MI +GKAKL +A L + M++ G PD +Y++L
Sbjct: 499 ETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQ 558
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + EA + +EM D+ C T MI Y +L ++ + L+ +M K G++P
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N V Y +L+ + ES + EAI FR+M++ GVQ N + ++I Y K E+A +
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 678
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+M+++ P+ ++++S+ G + A +F LR G D + + TM+ Y+
Sbjct: 679 DKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGM 737
Query: 476 GLVAHAKRLLHELK 489
G++ A + E++
Sbjct: 738 GMLDEAIEVAEEMR 751
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 214/461 (46%), Gaps = 38/461 (8%)
Query: 45 IASTTVAATV-----KDVWTRTTPSPYHRRTRTQQQMFLDHSIDMDELLASISSTQ-NEQ 98
++STT+AA + K +W Y +R + Q+ + ++ + ++ + + +E+
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR---NDVLEYNVMIKAYGKAKLHEK 533
Query: 99 ELHAVMSLYNQRQL-------SIRFMVSLLSRETDWQRALA-LLDWINEKALYSPSVFAY 150
L + NQ S+ M++ + + QR LA +LD + P Y
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD-----SGCKPGCKTY 588
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
++ + +R A L++ M + G+ P+ Y +LI F + G+++ ++ + + ME+
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
V + ++ ++LI+ K+G +A ++ ++K S PD+ A NSM+++ + E
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSE 708
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A + +R+ G C D +S++T++ +Y EA+ V EM ++ D T+ N ++
Sbjct: 709 AESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Query: 331 VYGQLHMVEEGDRLFWSM---RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM--QK 385
Y + E LF M RK+ ++ ++ TL + + + EA+ + +
Sbjct: 768 CYAADGQLSECCELFHEMLVERKLLLDWG--TFKTLFTLLKKGGVPSEAVSQLQTAYNEA 825
Query: 386 KGVQQNVVTYN--TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
K + +T + + +Y +LE QE+ + I Y+ +I + +G +
Sbjct: 826 KPLATPAITATLFSAMGLYAYALES------CQELTSGEIPREHFAYNAVIYTYSASGDI 879
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
D A + +++ G++ D V ++ Y +AG+V KR+
Sbjct: 880 DMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 228/470 (48%), Gaps = 36/470 (7%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY 183
ET + A+AL D + E L +P V +N ++ + + A L ++M +GL D
Sbjct: 204 ETGFLEAVALFDQMVEIGL-TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY T++ K G S+L L +ME+ ++ D+V+YS +I+ K G +S A +F+ +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
IAP++ YN MI+ F + +A+ LL++M + + PD ++++ L++ V +
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
EA + EM D T N MI + + + ++ +F M P+VV++NT+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTI 438
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
+ VY ++ E + L R + ++G+ N TYNT+I+ + + A +L QEM ++G+
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
P+ IT + ++ + + KL+ A LF+ ++ S + +D V Y +I H
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII----------HG-- 546
Query: 484 LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + +V+EA +F G D+ + MI+ +
Sbjct: 547 -------------------MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
++ +F KM++ G+ PD++ ++ K E +K+ L S++ G
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 188/373 (50%), Gaps = 5/373 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+V+ + + D + AL LL + E + P V Y+ ++ + + A LF EM ++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+AP+ +TY+ +I F G + L+ M + ++ D++ ++ LI S K G +A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + I PD + YNSMI F K F +A+ + M PD V+++T++ +
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
Y +R E + + E++ + TT N +I + ++ + LF M G+ P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
++ N LL + E+E EA+ LF ++Q + + V YN +I+ K + ++A +L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+ +G++P+ TY+ +IS + + A +LF K++ +G + D Y T+I +AG
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 477 LVAHAKRLLHELK 489
+ + L+ E++
Sbjct: 622 EIDKSIELISEMR 634
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W A LL + E+ + +P V +N ++ ++ + A L DEM R + PD TY+
Sbjct: 347 WSDAQRLLRDMIEREI-NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
++I F KH D + M S D+V ++ +I++ + + + + +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
+ + YN++I+ F + A+ L QEM +GVCPDT++ + LL + +NE+ EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
L +F + +K LD NI+I + V+E LF S+ G+EP+V +YN ++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ +A LF M+ G + + TYNT+I K+ E +K+ LI EM++NG +
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 427 AITYSTIISIWEKAGKLDRA 446
A T + + G+LD++
Sbjct: 642 AFTIKMVADLITD-GRLDKS 660
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 176/346 (50%), Gaps = 7/346 (2%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L ++ A L + EK + +P+VF YN ++ +W A L +M +R
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD T++ LI+ K G L + +M + D V Y+++I K + A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+F + + PD++ +N++I+V+ +AK E LL+E+ G+ +T +Y+TL+
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 297 YVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + + A +F EM + CP D TCNI++ + + +EE LF ++ I+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCP-DTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ V+YN ++ + EA LF + GV+ +V TYN MI+ + A L
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+M++NG +P+ TY+T+I KAG++D++ L ++RS+G D
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 197/445 (44%), Gaps = 55/445 (12%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+++++N++++ + + F ++ + G PD T++TL+ HGL
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL-----HGLC------- 187
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+D +S L L+ ++E + +A+++F ++ + P +I +N++IN
Sbjct: 188 ---LEDRISEALALFGYMVETG-----FLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
EA L+ +M G+ D V+Y T++ + +M D K L+L +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIV-------------NGMCKMGDTKSALNLLS- 285
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
M + I+P+VV Y+ ++ + +A +LF M +
Sbjct: 286 ---------------------KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG+ NV TYN MI+ + A L+++M I P+ +T++ +IS K GKL
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
A L ++ + D V Y +MI + + AK + + PD + T I V R
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
A+RV+E + R+ G V + + + +I+ + ++F++M G PD+
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 566 IALVLNAFGKLREFEKADALYSQIH 590
++L F + + E+A L+ I
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQ 529
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 178/391 (45%), Gaps = 48/391 (12%)
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
V + ++ ++V R A+S++ +M + PL++ + NI+I + H + F
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
+ K+G +P+VV++NTLL + EA+ LF M + G + V ++ M+ I
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI------ 220
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
G+ P IT++T+I+ G++ AA L K+ G+ ID V Y T
Sbjct: 221 --------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 468 MIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
++ + G A LL +++ +PD + I L + +A ++F + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF-------GKL 576
++ + CMI+ + ++++ + M E PD L NA GKL
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD----VLTFNALISASVKEGKL 382
Query: 577 REFEK-ADALYSQIHDEGCVFPDEVHFQMLSLYGARKD--FTMVESLFEKLDSNPNINKK 633
E EK D + + C+FPD V + + +YG K F + +F+ L ++P++
Sbjct: 383 FEAEKLCDEMLHR-----CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFD-LMASPDVVTF 435
Query: 634 ELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ +Y RA R+++ +++ ++ + +
Sbjct: 436 N---TIIDVYCRAKRVDEGMQLLREISRRGL 463
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 217/472 (45%), Gaps = 43/472 (9%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W + + +WI K+ + P V +N+++ + Q+ A L+ ++ + P TY+
Sbjct: 135 WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYA 194
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV---LYSNLIE-LSRKLGDYSKAISIFAR 242
LI + GL++ + L +M+ +VS + +Y+ IE L ++ G+ +AI +F R
Sbjct: 195 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 254
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
+K P YN MIN++GKA + L EMR + P+ +Y+ L+ +
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
+A +F ++ + D+ N +++ Y + +F M+ MG EP+ SYN
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
++ YG + L +A +F M++ G+ + ++ +++ Y K+ + K +++EM NG
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
++P+ +++++++ + G+ + + ++ + D Y +I Y +AG + +
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 483 RLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLY 538
L ELK RPD + TW R I Y
Sbjct: 495 ELFVELKEKNFRPDVV------------------TWTSR-----------------IGAY 519
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
SR K Y +EVFE+M + G PD ++L+A + E+ ++ +H
Sbjct: 520 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 174/353 (49%), Gaps = 2/353 (0%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
++ L+ R+ + + A+ + + P+ YN+++ +A + +++ L+ EMR
Sbjct: 234 YIEGLMKRKGNTEEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYCEMRS 292
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
P+ TY+ L+ F + GL + + +Q+++D + D+ +Y+ L+E + G
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 352
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A IF+ ++ PD +YN M++ +G+A L +A + +EM+ G+ P S+ LL+
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + ++ EM++ D N M+++YG+L + +++ M
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++ +YN L+ +YG++ LF +++K + +VVT+ + I Y + + K +
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+EM ++G P+ T ++S ++++ + + + GV + ++ + M
Sbjct: 533 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVTVSSLVPKLM 584
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 199/421 (47%), Gaps = 47/421 (11%)
Query: 254 AYNSMINVFGKAKLFR--EARLLLQE--MRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
+++ +INV + +L + ++ +L+ E +R + PD + ++ L+ Y ++ EA S+
Sbjct: 118 SWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 177
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS---YNT---- 362
+ ++ +++ T ++I Y ++E + + M+ + P + YN
Sbjct: 178 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 237
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
L++ G +E EAI +F+ M++ + TYN MIN+YGK+ + + L EM+++
Sbjct: 238 LMKRKGNTE---EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ 294
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
+PN TY+ +++ + + G ++A +F++L+ G++ D +Y ++ +Y RAG A
Sbjct: 295 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 354
Query: 483 RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
+ ++ P D + + M++ Y R
Sbjct: 355 EIFSLMQHMGCEP-------------------------------DRASYNIMVDAYGRAG 383
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE-VH 601
+++ VFE+M+ +G P L+L+A+ K R+ K +A+ ++ + G V PD V
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDTFVL 442
Query: 602 FQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNH 661
ML+LYG FT +E + ++++ P + ++ IY +A L + +
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 662 K 662
K
Sbjct: 503 K 503
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 217/472 (45%), Gaps = 43/472 (9%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W + + +WI K+ + P V +N+++ + Q+ A L+ ++ + P TY+
Sbjct: 157 WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYA 216
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV---LYSNLIE-LSRKLGDYSKAISIFAR 242
LI + GL++ + L +M+ +VS + +Y+ IE L ++ G+ +AI +F R
Sbjct: 217 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 276
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
+K P YN MIN++GKA + L EMR + P+ +Y+ L+ +
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
+A +F ++ + D+ N +++ Y + +F M+ MG EP+ SYN
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
++ YG + L +A +F M++ G+ + ++ +++ Y K+ + K +++EM NG
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
++P+ +++++++ + G+ + + ++ + D Y +I Y +AG + +
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 483 RLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLY 538
L ELK RPD + TW R I Y
Sbjct: 517 ELFVELKEKNFRPDVV------------------TWTSR-----------------IGAY 541
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
SR K Y +EVFE+M + G PD ++L+A + E+ ++ +H
Sbjct: 542 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 593
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 174/353 (49%), Gaps = 2/353 (0%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
++ L+ R+ + + A+ + + P+ YN+++ +A + +++ L+ EMR
Sbjct: 256 YIEGLMKRKGNTEEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYCEMRS 314
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
P+ TY+ L+ F + GL + + +Q+++D + D+ +Y+ L+E + G
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 374
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A IF+ ++ PD +YN M++ +G+A L +A + +EM+ G+ P S+ LL+
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + ++ EM++ D N M+++YG+L + +++ M
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++ +YN L+ +YG++ LF +++K + +VVT+ + I Y + + K +
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+EM ++G P+ T ++S ++++ + + + GV + ++ + M
Sbjct: 555 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVTVSSLVPKLM 606
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 199/421 (47%), Gaps = 47/421 (11%)
Query: 254 AYNSMINVFGKAKLFR--EARLLLQE--MRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
+++ +INV + +L + ++ +L+ E +R + PD + ++ L+ Y ++ EA S+
Sbjct: 140 SWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 199
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS---YNT---- 362
+ ++ +++ T ++I Y ++E + + M+ + P + YN
Sbjct: 200 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 259
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
L++ G +E EAI +F+ M++ + TYN MIN+YGK+ + + L EM+++
Sbjct: 260 LMKRKGNTE---EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ 316
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
+PN TY+ +++ + + G ++A +F++L+ G++ D +Y ++ +Y RAG A
Sbjct: 317 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 376
Query: 483 RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
+ ++ P D + + M++ Y R
Sbjct: 377 EIFSLMQHMGCEP-------------------------------DRASYNIMVDAYGRAG 405
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE-VH 601
+++ VFE+M+ +G P L+L+A+ K R+ K +A+ ++ + G V PD V
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDTFVL 464
Query: 602 FQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNH 661
ML+LYG FT +E + ++++ P + ++ IY +A L + +
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 662 K 662
K
Sbjct: 525 K 525
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 7/378 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P + ++R R + A + + + G PD TY+ +I+ + K G ++++L
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M +VS D+V Y+ ++ G +A+ + R+ PD+I Y +I +
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A LL EMRD G PD V+Y+ L+ R EA+ ++M + C ++ T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
NI++ + ++L M + G P+VV++N L+ L G AI + M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+ G Q N ++YN +++ + K + ++A ++ M + G P+ +TY+T+++ K GK++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAI 500
A + +L S G + Y T+I +AG A +LL E++ +PD I + +
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 501 MVLARARRVEEATWVFRQ 518
L+R +V+EA F +
Sbjct: 492 GGLSREGKVDEAIKFFHE 509
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 216/456 (47%), Gaps = 8/456 (1%)
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNV 213
LR ++R + + M G PD +TLI F + G + L+ +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
D++ Y+ +I K G+ + A+S+ R+ S++PD++ YN+++ + ++A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+L M PD ++Y+ L+ + A+ + EM D C D+ T N++++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ ++E + M G +PNV+++N +LR + + +A L M +KG +VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
T+N +IN + +A +++++M +G QPN+++Y+ ++ + K K+DRA +++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRV 509
S G D V Y TM+ A + G V A +L++L P I T I LA+A +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
+A + + A D + ++ SR K ++ F + +G P++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 570 LNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+ K R+ ++A + + GC P+E + +L
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCK-PNETSYTIL 560
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 182/372 (48%), Gaps = 7/372 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V YNV++ +A + + A + D M ++PD TY+T++ G L ++
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M Q + D++ Y+ LIE + + A+ + ++ PD++ YN ++N K
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L +M +G P+ ++++ +L R+++A + ++M + T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
NI+I+ + ++ + M + G +PN +SYN LL + + + AI M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+G ++VTYNTM+ K + E A ++ ++ + G P ITY+T+I KAGK
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAI 500
+A L ++R+ ++ D + Y +++ R G V A + HE + RP+ + + +
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 501 MVLARARRVEEA 512
+ L ++R+ + A
Sbjct: 527 LGLCKSRQTDRA 538
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 175/361 (48%), Gaps = 1/361 (0%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++A+ +LD + ++ Y P V Y +++ R A L DEMR RG PD TY+
Sbjct: 221 KQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
L+ K G LD ++ +L M +++ ++ ++ G + A + A +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
+P ++ +N +IN + L A +L++M +G P+++SY+ LL + ++ A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
M C D+ T N M+ + VE+ + + G P +++YNT++
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
++ G+AI L M+ K ++ + +TY++++ + + ++A E + GI+PNA
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
+T+++I+ K+ + DRA + + G + ++ Y +I G+ A LL+E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 488 L 488
L
Sbjct: 580 L 580
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 178/387 (45%), Gaps = 4/387 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+S + + AL++LD ++ SP V YN +LR++ + + A + D M QR
Sbjct: 178 MISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
PD TY+ LI + + ++ L +M + D+V Y+ L+ K G +A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I + +S P++I +N ++ + +A LL +M G P V+++ L+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
A+ + +M C + + N ++ + + ++ M G P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+V+YNT+L + +A+ + + KG ++TYNT+I+ K+ + KA L+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM+ ++P+ ITYS+++ + GK+D A F + G++ + V + ++++ ++
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 477 LVAHAKRLLHELKRPDNIPRETAIMVL 503
A L + P ET+ +L
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 197/456 (43%), Gaps = 46/456 (10%)
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY------------ 297
PD+I ++I F + R+A +L+ + +G PD ++Y+ +++ Y
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 298 --------------------VDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
D+ + +A+ V M C D+ T I+I+ +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
V +L MR G P+VV+YN L+ + EAI M G Q NV+T+N
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
++ + A L+ +M G P+ +T++ +I+ + G L RA + +K+ G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 458 VQIDQVLYQTMIVAY------ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEE 511
Q + + Y ++ + +RA + + +R++ PD + T + L + +VE+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRA--IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 512 ATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
A + Q + G + + +I+ ++ K +++ ++MR PD+ + ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 572 AFGKLREFEKADALYSQIHDEGCVFPDEVHFQ--MLSLYGARKDFTMVESLFEKLDSNPN 629
+ + ++A + + G + P+ V F ML L +R+ ++ L ++
Sbjct: 493 GLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 630 INKKELHLVVSGI-YERADRLNDASRIMNRMNHKAI 664
N+ +++ G+ YE + +A ++N + +K +
Sbjct: 552 PNETSYTILIEGLAYEGMAK--EALELLNELCNKGL 585
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 228/470 (48%), Gaps = 36/470 (7%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY 183
ET + A+AL D + E L +P V +N ++ + + A L ++M +GL D
Sbjct: 204 ETGFLEAVALFDQMVEIGL-TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY T++ K G S+L L +ME+ ++ D+V+YS +I+ K G +S A +F+ +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
IAP++ YN MI+ F + +A+ LL++M + + PD ++++ L++ V +
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
EA + EM D T N MI + + + ++ +F M P+VV++NT+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
+ VY ++ E + L R + ++G+ N TYNT+I+ + + A +L QEM ++G+
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
P+ IT + ++ + + KL+ A LF+ ++ S + +D V Y +I H
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII----------HG-- 546
Query: 484 LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + +V+EA +F G D+ + MI+ +
Sbjct: 547 -------------------MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
++ +F KM++ G+ PD++ ++ K E +K+ L S++ G
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 211/438 (48%), Gaps = 25/438 (5%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L ++ A L + EK + +P+VF YN ++ +W A L +M +R
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD T++ LI+ K G L + +M + D V Y+++I K + A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+F + + PD++ +N++I+V+ +AK E LL+E+ G+ +T +Y+TL+
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 297 YVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + + A +F EM + CP D TCNI++ + + +EE LF ++ I+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCP-DTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ V+YN ++ + EA LF + GV+ +V TYN MI+ + A L
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+M++NG +P+ TY+T+I KAG++D++ L ++RS+G D T+ +A E
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF---TIKMAEEII 652
Query: 476 GLVAHAKRLLHELKRP------DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
V+ + ++ RP +IPR ++ LA E + RQ +
Sbjct: 653 CRVSD-EEIIENYLRPKINGETSSIPR--YVVELAEELYTVEPWLLPRQTAPILNPGEWF 709
Query: 530 VFGCMINLYSRNKKYTNV 547
FG RN+KY+N+
Sbjct: 710 YFG------KRNRKYSNL 721
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 197/445 (44%), Gaps = 55/445 (12%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+++++N++++ + + F ++ + G PD T++TL+ HGL
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL-----HGLC------- 187
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+D +S L L+ ++E + +A+++F ++ + P +I +N++IN
Sbjct: 188 ---LEDRISEALALFGYMVETG-----FLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
EA L+ +M G+ D V+Y T++ + +M D K L+L +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIV-------------NGMCKMGDTKSALNLLS- 285
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
M + I+P+VV Y+ ++ + +A +LF M +
Sbjct: 286 ---------------------KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG+ NV TYN MI+ + A L+++M I P+ +T++ +IS K GKL
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
A L ++ + D V Y +MI + + AK + + PD + T I V R
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
A+RV+E + R+ G V + + + +I+ + ++F++M G PD+
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 566 IALVLNAFGKLREFEKADALYSQIH 590
++L F + + E+A L+ I
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQ 529
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 178/391 (45%), Gaps = 48/391 (12%)
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
V + ++ ++V R A+S++ +M + PL++ + NI+I + H + F
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
+ K+G +P+VV++NTLL + EA+ LF M + G + V ++ M+ I
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI------ 220
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
G+ P IT++T+I+ G++ AA L K+ G+ ID V Y T
Sbjct: 221 --------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 468 MIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
++ + G A LL +++ +PD + I L + +A ++F + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF-------GKL 576
++ + CMI+ + ++++ + M E PD L NA GKL
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD----VLTFNALISASVKEGKL 382
Query: 577 REFEK-ADALYSQIHDEGCVFPDEVHFQMLSLYGARKD--FTMVESLFEKLDSNPNINKK 633
E EK D + + C+FPD V + + +YG K F + +F+ L ++P++
Sbjct: 383 FEAEKLCDEMLHR-----CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFD-LMASPDVVTF 435
Query: 634 ELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ +Y RA R+++ +++ ++ + +
Sbjct: 436 N---TIIDVYCRAKRVDEGMQLLREISRRGL 463
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 218/455 (47%), Gaps = 5/455 (1%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L E AL L+D + E + P++ N ++ + + A L D M + G P
Sbjct: 168 LCLECRVSEALELVDRMVEMG-HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
+ TY ++ K G ++ L++ME+ N+ D V YS +I+ K G A ++F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
++ D+I YN++I F A + + LL++M + P+ V++S L+ +V
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
+ EA + EM + T N +ID + + + +EE ++ M G +P+++++
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
N L+ Y ++ + + LFR M +GV N VTYNT++ + +S + E A L QEM +
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAH 480
++P+ ++Y ++ G+L++A +F K+ S +++D +Y +I A V
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 481 AKRLLHEL--KRPDNIPRETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCMIN 536
A L L K R IM+ L R + +A +FR+ G D + +I
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 537 LYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
+ + T E+ E+M+ G+ D + + +V+N
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/529 (22%), Positives = 242/529 (45%), Gaps = 14/529 (2%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQL-----SIRFMVSLLSRETDWQRALALLDW 136
ID + L ++I+ T+ + + A+ + + ++ M++ R A + +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
I K Y P +N +L + + A L D M + G P T +TL+ +G
Sbjct: 149 I-MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYN 256
+ ++ + +M + + V Y ++ + K G + A+ + +++ +I D + Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 257 SMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
+I+ K A L EM G D ++Y+TL+ + + R+ + + +M
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
K ++ T +++ID + + + E D+L M + GI PN ++YN+L+ + + EA
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
I + LM KG +++T+N +IN Y K+ + L +EM G+ N +TY+T++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
+ ++GKL+ A LFQ++ S V+ D V Y+ ++ G + A + ++++ +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS-KMEL 506
Query: 497 ETAIMV-----LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+ I + + A +V++A +F G D + MI+ R + +F
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV 600
KM E G+ PD +++ A + A L ++ G FP +V
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG--FPADV 613
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 241/533 (45%), Gaps = 43/533 (8%)
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
D I + L P+V +N + + + KQ+ L L +M +G+A YT S +I F +
Sbjct: 78 DMIQSRPL--PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 195 HGLLDSSLFWLQQMEQDNVSGDLVLYSNL--------------------IELSRKL---- 230
L + + ++ + D V+++ L +E+ K
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 231 -----------GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR 279
G S A+ + R+ + P+ + Y ++NV K+ A LL++M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 280 DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
+ + D V YS ++ + A ++F+EM D+ T N +I + +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 340 EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
+G +L M K I PNVV+++ L+ + + EA L + M ++G+ N +TYN++I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+ + K E+A ++ M + G P+ +T++ +I+ + KA ++D LF+++ GV
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWV 515
+ V Y T++ + ++G + AK+L E+ RPD + + + L +E+A +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
F + + DI ++ +I+ K + ++F + G D+ ++++ +
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 576 LREFEKADALYSQIHDEGCVFPDEVHFQML-SLYGARKDFTMVESLFEKLDSN 627
KAD L+ ++ +EG PDE+ + +L + D T L E++ S+
Sbjct: 556 KDSLSKADILFRKMTEEGHA-PDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 151/336 (44%), Gaps = 5/336 (1%)
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
L ++M + P + ++ L + +++ L++ +M + T +IMI+ +
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ + + K+G EP+ V +NTLL EA+ L M + G + ++
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
T NT++N + + A LI M G QPN +TY ++++ K+G+ A L +K+
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRV 509
+++D V Y +I + G + +A L +E++ + D I T I A R
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
++ + R ++ F +I+ + + K ++ ++M + G P++ +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 570 LNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
++ F K E+A + + +GC PD + F +L
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCD-PDIMTFNIL 409
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 235/487 (48%), Gaps = 7/487 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V +YN+V+ V + + AH L M +G PD +YST++ + + G LD +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ M++ + + +Y ++I L ++ ++A F+ + I PD + Y ++I+ F K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
R A EM + PD ++Y+ +++ + VEA +F EM D T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
+I+ Y + +++ R+ M + G PNVV+Y TL+ + A L M K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G+Q N+ TYN+++N KS E+A L+ E + G+ + +TY+T++ + K+G++D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
A + +++ G+Q V + ++ + G++ ++LL+ + P T L +
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 506 A----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
++ AT +++ + G D + ++ + + + +F++M+ G+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV--HFQMLSLYGARKDFTMVES 619
+ ++++ F K ++F +A ++ Q+ EG E+ F G R D T+V+
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD-TIVDP 723
Query: 620 LFEKLDS 626
+ E +++
Sbjct: 724 IDEIIEN 730
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 210/464 (45%), Gaps = 40/464 (8%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y +S +V+ R + + L++ + K L P+ + Y ++ + R + A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL-KPNSYIYGSIIGLLCRICKLAEA 335
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
F EM ++G+ PD Y+TLI F K G + ++ + +M +++ D++ Y+ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
++GD +A +F + + PD + + +IN + KA ++A + M G P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+Y+TL+ D C G L + + L
Sbjct: 456 VVTYTTLI--------------------DGLCK------------EGDL---DSANELLH 480
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M K+G++PN+ +YN+++ +S EA+ L + G+ + VTY T+++ Y KS
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E +KA +++EM G+QP +T++ +++ + G L+ L + + G+ + +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 467 TMIVAY----ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+++ Y A K + PD E + +AR ++EA ++F++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
G +S + +I + + KK+ EVF++MR G D +
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 203/460 (44%), Gaps = 4/460 (0%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
+F E + G+ + +Y+ +I + G + + L ME + D++ YS ++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
+ G+ K + +K + P+ Y S+I + + EA EM G+ PDTV
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
Y+TL+ + A F EM+ D+ T +I + Q+ + E +LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
G+EP+ V++ L+ Y ++ +A + M + G NVVTY T+I+ K +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ A L+ EM G+QPN TY++I++ K+G ++ A L + ++G+ D V Y T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA----RRVEEATWVFRQAFAAGE 524
+ AY ++G + A+ +L E+ P VL +E+ + A G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADA 584
+ + F ++ Y +++ M G PD ++ K R ++A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 585 LYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
L+ ++ +G + ++ + RK F +F+++
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/539 (20%), Positives = 238/539 (44%), Gaps = 18/539 (3%)
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
DW ++ ++ VF +V +LR A +F++M GL + + +T K
Sbjct: 170 DWGSDPRVFD--VFFQVLVDFGLLRE-----ARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 195 HGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
+++ ++ + V ++ Y+ +I +LG +A + ++ PD+I
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
+Y++++N + + + L++ M+ G+ P++ Y +++ + + EA FSEM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
D +ID + + + + F+ M I P+V++Y ++ + +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA LF M KG++ + VT+ +IN Y K+ + A + M G PN +TY+T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK---- 489
I K G LD A L ++ G+Q + Y +++ ++G + A +L+ E +
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
D + T + ++ +++A + ++ G I F ++N + + + +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYG 609
+ M G P++ ++ + + A A+Y + G V PD ++ L + G
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENL-VKG 640
Query: 610 ARKDFTMVES--LFEKLDSNP-NINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
K M E+ LF+++ +++ +++ G +R L +A + ++M + +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL-EAREVFDQMRREGLA 698
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 132/282 (46%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
+A SP+V Y ++ + + A+ L EM + GL P+ +TY++++ K G ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
++ + + E ++ D V Y+ L++ K G+ KA I + + P ++ +N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
N F + + LL M G+ P+ ++++L+ Y A +++ +M
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D T ++ + + ++E LF M+ G +V +Y+ L++ + + + F EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
F M+++G+ + ++ + K + + I E+ N
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 235/487 (48%), Gaps = 7/487 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V +YN+V+ V + + AH L M +G PD +YST++ + + G LD +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ M++ + + +Y ++I L ++ ++A F+ + I PD + Y ++I+ F K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
R A EM + PD ++Y+ +++ + VEA +F EM D T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
+I+ Y + +++ R+ M + G PNVV+Y TL+ + A L M K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G+Q N+ TYN+++N KS E+A L+ E + G+ + +TY+T++ + K+G++D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
A + +++ G+Q V + ++ + G++ ++LL+ + P T L +
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 506 A----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
++ AT +++ + G D + ++ + + + +F++M+ G+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV--HFQMLSLYGARKDFTMVES 619
+ ++++ F K ++F +A ++ Q+ EG E+ F G R D T+V+
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD-TIVDP 723
Query: 620 LFEKLDS 626
+ E +++
Sbjct: 724 IDEIIEN 730
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 210/464 (45%), Gaps = 40/464 (8%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y +S +V+ R + + L++ + K L P+ + Y ++ + R + A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL-KPNSYIYGSIIGLLCRICKLAEA 335
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
F EM ++G+ PD Y+TLI F K G + ++ + +M +++ D++ Y+ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
++GD +A +F + + PD + + +IN + KA ++A + M G P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+Y+TL+ D C G L + + L
Sbjct: 456 VVTYTTLI--------------------DGLCK------------EGDL---DSANELLH 480
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M K+G++PN+ +YN+++ +S EA+ L + G+ + VTY T+++ Y KS
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E +KA +++EM G+QP +T++ +++ + G L+ L + + G+ + +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 467 TMIVAY----ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+++ Y A K + PD E + +AR ++EA ++F++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
G +S + +I + + KK+ EVF++MR G D +
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 203/460 (44%), Gaps = 4/460 (0%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
+F E + G+ + +Y+ +I + G + + L ME + D++ YS ++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
+ G+ K + +K + P+ Y S+I + + EA EM G+ PDTV
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
Y+TL+ + A F EM+ D+ T +I + Q+ + E +LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
G+EP+ V++ L+ Y ++ +A + M + G NVVTY T+I+ K +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ A L+ EM G+QPN TY++I++ K+G ++ A L + ++G+ D V Y T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA----RRVEEATWVFRQAFAAGE 524
+ AY ++G + A+ +L E+ P VL +E+ + A G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADA 584
+ + F ++ Y +++ M G PD ++ K R ++A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 585 LYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
L+ ++ +G + ++ + RK F +F+++
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/539 (20%), Positives = 238/539 (44%), Gaps = 18/539 (3%)
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
DW ++ ++ VF +V +LR A +F++M GL + + +T K
Sbjct: 170 DWGSDPRVFD--VFFQVLVDFGLLRE-----ARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 195 HGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
+++ ++ + V ++ Y+ +I +LG +A + ++ PD+I
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
+Y++++N + + + L++ M+ G+ P++ Y +++ + + EA FSEM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
D +ID + + + + F+ M I P+V++Y ++ + +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA LF M KG++ + VT+ +IN Y K+ + A + M G PN +TY+T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK---- 489
I K G LD A L ++ G+Q + Y +++ ++G + A +L+ E +
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
D + T + ++ +++A + ++ G I F ++N + + + +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYG 609
+ M G P++ ++ + + A A+Y + G V PD ++ L + G
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENL-VKG 640
Query: 610 ARKDFTMVES--LFEKLDSNP-NINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
K M E+ LF+++ +++ +++ G +R L +A + ++M + +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL-EAREVFDQMRREGLA 698
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 132/282 (46%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
+A SP+V Y ++ + + A+ L EM + GL P+ +TY++++ K G ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
++ + + E ++ D V Y+ L++ K G+ KA I + + P ++ +N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
N F + + LL M G+ P+ ++++L+ Y A +++ +M
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D T ++ + + ++E LF M+ G +V +Y+ L++ + + + F EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
F M+++G+ + ++ + K + + I E+ N
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 212/449 (47%), Gaps = 44/449 (9%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
F+V + +E+ WQRAL + +W+N + +SP+ +L G+ Q
Sbjct: 161 FVVKSVGQES-WQRALEVFEWLNLRHWHSPNARMVAAIL-------------GVLGRWNQ 206
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
LA + +T + + V + +Y+ ++ + + G +SK
Sbjct: 207 ESLAVEIFTRA-----------------------EPTVGDRVQVYNAMMGVYSRSGKFSK 243
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE--ARLLLQEMRDNGVCPDTVSYSTL 293
A + ++ PDLI++N++IN K+ A LL +R++G+ PD ++Y+TL
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
L+ + A+ VF +M +C DL T N MI VYG+ + E +RLF + G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
P+ V+YN+LL + + +++ MQK G ++ +TYNT+I++YGK + + A
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 414 LIQEMQN-NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L ++M+ +G P+AITY+ +I KA + AA L ++ G++ Y +I Y
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 473 ERAGLVAHAKR----LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+AG A+ +L +PDN+ + VL R +A ++R + G
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREV 557
+++ MI + + ++ + M E+
Sbjct: 544 TLYELMILGLMKENRSDDIQKTIRDMEEL 572
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 228/520 (43%), Gaps = 51/520 (9%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME 209
Y +L + + + A +F ++R G +++ + K G +++ + Q E
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 210 QDNVS-GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+Y+++IE K + KA S+ L+ S PDL +NS+++ + + +
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
AR + M +G P S + LL + R E V E+ D + ++ +M
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY---------------------------- 360
+D + + + E +++ SM+ G P + Y
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 361 -------NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
N++L++Y E + + + +++ +++ G++ + TYNT+I +Y + E+
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L+Q+M+N G+ P TY ++IS + K L++A LF++L S G+++D+ Y TM+
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 474 RAGLVAHAKRLLHELKRPDNIPRETAIMVL----ARARRVEEATWVFRQAFAAGEVNDIS 529
+G + A++LL +K P + +L + + +EA V EV +
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN-LKDTEVELTT 1102
Query: 530 V-FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ + +I+ Y R+K Y + +E +M++ G PD + + A +E + L
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKA 1162
Query: 589 IHDEGCVFPDEVHFQMLSLYGARKDF--TMVESLFEKLDS 626
+ D G P + L R + + V+ FEKL S
Sbjct: 1163 LEDIGFDLP-------IRLLAGRPELLVSEVDGWFEKLKS 1195
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 167/365 (45%), Gaps = 39/365 (10%)
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
S A+ IF R + + + + YN+M+ V+ ++ F +A+ L+ MR G PD +S++TL
Sbjct: 208 SLAVEIFTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ +A+ T N+ +++ L MV R G+
Sbjct: 267 I--------------------NARLKSGGLTPNLAVEL---LDMV----------RNSGL 293
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
P+ ++YNTLL A+ +F M+ Q ++ TYN MI++YG+ +A
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L E++ G P+A+TY++++ + + ++ ++Q+++ G D++ Y T+I Y
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 474 RAGLVAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ G + A +L ++K PD I I L +A R EA + + G +
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ +I Y++ K + F M G PD+ +++L+ + E KA LY
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRD 533
Query: 589 IHDEG 593
+ +G
Sbjct: 534 MISDG 538
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 235/554 (42%), Gaps = 79/554 (14%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQW--HLAHGLFDEMR 174
M+ + SR + +A L+D + ++ P + ++N ++ L++ +LA L D +R
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCV-PDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
GL PD TY+TL++ + LD ++ + ME DL Y+ +I + + G +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A +F L+ PD + YNS++ F + + + + + Q+M+ G D ++Y+T++
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 295 AIYVDNERFVEALSVFSEMN--DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+Y + AL ++ +M + P D T ++ID G+ + E L M +G
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNP-DAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I+P + +Y+ L+ Y ++ EA F M + G + + + Y+ M+++ + E KA
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 413 NLIQEMQNNGIQPNAITYSTII-------------------------------SIWEKAG 441
L ++M ++G P+ Y +I S+ K
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGE 588
Query: 442 KLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRE 497
D AA + ++G +++ +++ +Y +G + A LL LK + E
Sbjct: 589 CFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITE 648
Query: 498 TAIMVLARARRVEEA-----------TWVFRQ-----------------AFAAGEVNDIS 529
I++ + + A W F A A+ +D+
Sbjct: 649 ALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLR 708
Query: 530 VFGC---------MINLYSRNKKYTNVVEVFEKMREVGY-FPDSNVIALVLNAFGKLREF 579
+ GC M+ +Y + +V + G+ F S + ++ A+GK + +
Sbjct: 709 LSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLW 768
Query: 580 EKADALYSQIHDEG 593
+KA+++ + G
Sbjct: 769 QKAESVVGNLRQSG 782
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 35/308 (11%)
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
PN +L V G A+ +F + V V YN M+ +Y +S + KA L
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKL--DRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ M+ G P+ I+++T+I+ K+G L + A L +R+SG++ D + Y T++ A
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
R + A ++ +++ A R + W +
Sbjct: 308 SRDSNLDGAVKVFEDME----------------AHRCQPDLWTY---------------N 336
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
MI++Y R +F ++ G+FPD+ +L AF + R EK +Y Q+
Sbjct: 337 AMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 593 GCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKEL-HLVVSGIYERADRLND 651
G + + ++ +YG + + L++ + N + + V+ +A+R +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 652 ASRIMNRM 659
A+ +M+ M
Sbjct: 457 AAALMSEM 464
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 115 RFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMR 174
R M+ LL + + A ++ + E+A + + +N +L+ + + ++ ++
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ GL PD TY+TLI + + + +QQM + L Y +LI K
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A +F L + + D Y++M+ + + +A LLQ M++ G+ P + L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
Y + EA V S + D + L + +ID Y + G M+K G+E
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
P+ + +R S+ E + L + ++ G
Sbjct: 1135 PDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 31/302 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ + + D+++ + + I E L P YN ++ R ++ + L +MR
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGL-EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
GL P TY +LI+ FGK L+ + +++ + D Y ++++SR G SKA
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +K + I P L + ++ + + +EA +L ++D V T+ YS+++
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 297 YVDNERFVEALSVFSEMNDAKCPLD--LTTC----------------------NIMIDVY 332
Y+ ++ + + EM D + TC +I D+
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLP 1171
Query: 333 GQLH------MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
+L +V E D F ++ + + N LL + EL A +F+L K+
Sbjct: 1172 IRLLAGRPELLVSEVDGWFEKLKSIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKR 1231
Query: 387 GV 388
G+
Sbjct: 1232 GI 1233
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 184/353 (52%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
Y P + N +L + A L D+M + G PD T++TLI H ++
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+ +M Q DLV Y ++ K GD A+++ +++A+ I +++ Y+++I+
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K + +A L EM + GV P+ ++YS+L++ + R+ +A + S+M + K +L
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T + +ID + + + + ++L+ M K I+PN+ +Y++L+ + + GEA + L
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M +K NVVTYNT+IN + K+ +K L +EM G+ N +TY+T+I + +A
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
D A M+F+++ S GV + + Y ++ + G +A A + L+R P
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 183/347 (52%), Gaps = 1/347 (0%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+AL+D + E Y P + ++ + + A L D M QRG PD TY ++
Sbjct: 167 AVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
K G D +L L +ME + ++V+YS +I+ K A+++F ++ +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P++I Y+S+I+ + +A LL +M + + P+ V++S L+ +V + V+A +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+ EM ++ T + +I+ + L + E ++ M + PNVV+YNTL+ + +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
++ + + LFR M ++G+ N VTY T+I+ + ++ + + A + ++M + G+ PN +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
Y+ ++ K GKL +A ++F+ L+ S ++ D Y MI +AG
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 216/461 (46%), Gaps = 4/461 (0%)
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
+ +A + + Y VLR L + A GLF M Q P +S L++
Sbjct: 30 FSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIA 89
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
K D + + ++ME +S +L Y+ LI + S A+++ ++ PD++
Sbjct: 90 KMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
NS++N F +A L+ +M + G PDTV+++TL+ + + EA+++ M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
C DL T +++ + + L M IE NVV Y+T++ +
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
+A++LF M+ KGV+ NV+TY+++I+ A+ L+ +M I PN +T+S +
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
I + K GKL +A L++++ + + Y ++I + + AK++L + R D
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 494 IPR----ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
+P T I +A+RV++ +FR+ G V + + +I+ + + + N
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
VF++M VG P+ ++L+ K + KA ++ +
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 185/440 (42%), Gaps = 42/440 (9%)
Query: 198 LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
LD ++ M Q ++ +S L+ K+ + IS +++ I+ +L YN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
+IN F + A LL +M G PD V+ ++LL + R +A+++ +M
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM---- 174
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
VE MG +P+ V++ TL+ EA+
Sbjct: 175 --------------------VE-----------MGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
L M ++G Q ++VTY ++N K + + A NL+ +M+ I+ N + YST+I
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDN 493
K D A LF ++ + GV+ + + Y ++I G + A RLL ++ P+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ I + ++ +A ++ + +I + +IN + + ++ E
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKD 613
M P+ ++N F K + +K L+ ++ G V + ++ + +D
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 614 FTMVESLFEKLDS---NPNI 630
+ +F+++ S +PNI
Sbjct: 444 CDNAQMVFKQMVSVGVHPNI 463
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 248/534 (46%), Gaps = 10/534 (1%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
++ S+ A N ++ +++R LA G++ E+ + G+ + YT + ++ K G ++
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+L Q+++ V D+V Y+ LI G +A + + +P + YN++IN
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K + A+ + EM +G+ PD+ +Y +LL VE VFS+M DL
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+ M+ ++ + +++ F S+++ G+ P+ V Y L++ Y + A++L
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M ++G +VVTYNT+++ K +A L EM + P++ T + +I K G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
L A LFQK++ +++D V Y T++ + + G + AK + ++ + +P + +
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 503 LARA----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
L A + EA V+ + + + + MI Y R+ ++ EKM G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDE-GCVFPDEVHFQMLSLYGARKDFTMV 617
+ PD ++ F + KA L ++ +E G + PD + + L+G + M
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI-LHGFCRQNQMK 674
Query: 618 ES---LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIGNHD 668
E+ L + ++ N ++ +++G + D L +A RI + M + D
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQ-DNLTEAFRIHDEMLQRGFSPDD 727
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 183/383 (47%), Gaps = 8/383 (2%)
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+RKL + +A ++ R K +++ D A N++I + A + QE+ +GV +
Sbjct: 178 ARKLREAHEAFTLL-RSKGFTVSID--ACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+ + ++ + + + + S++ + D+ T N +I Y ++EE L
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
+M G P V +YNT++ + + A +F M + G+ + TY +++ K
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ + + +M++ + P+ + +S+++S++ ++G LD+A M F ++ +G+ D V+Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 467 TMIVAYERAGLVAHAKRLLHELKRP----DNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+I Y R G+++ A L +E+ + D + T + L + + + EA +F +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
D +I+ + + N +E+F+KM+E D +L+ FGK+ + + A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 583 DALYSQIHDEGCVFPDEVHFQML 605
+++ + + + P + + +L
Sbjct: 535 KEIWADMVSKE-ILPTPISYSIL 556
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 184/384 (47%), Gaps = 6/384 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P VFAYN ++ + + A + D MR + +PD TY+ +I G LD +L
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L Q+ DN ++ Y+ LIE + G +A+ + + + + PD+ YN++I K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ A +++ + G PD +SY+ LL ++ ++ E + ++M KC ++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+I+I + +EE L M++ G+ P+ SY+ L+ + AI M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS-IWEKAGKL 443
G ++V YNT++ K+ + ++A + ++ G PN+ +Y+T+ S +W K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETA 499
RA + ++ S+G+ D++ Y +MI R G+V A LL +++ P +
Sbjct: 456 -RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 500 IMVLARARRVEEATWVFRQAFAAG 523
++ +A R+E+A V G
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNG 538
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 166/350 (47%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V Y +++ + A L DEM RGL PD +TY+T+I K G++D +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++ +E D++ Y+ L+ G + + + ++ + P+++ Y+ +I +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA LL+ M++ G+ PD SY L+A + R A+ M C D+
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N ++ + ++ +F + ++G PN SYNT+ S A+H+ M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
G+ + +TYN+MI+ + ++A L+ +M++ P+ +TY+ ++ + KA +++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
A + + + +G + ++ Y +I AG A A L ++L R D I
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 6/305 (1%)
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
++E+L + M D+ C +I + L + + R+ + K G +P+V +YN
Sbjct: 105 YIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNA 163
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
L+ + + +A + M+ K + VTYN MI + + A ++ ++ ++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
QP ITY+ +I G +D A L ++ S G++ D Y T+I + G+V A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 483 RLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLY 538
++ L+ PD I + L + EE + + F+ ++ + +I
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
R+ K + + + M+E G PD+ ++ AF + + A + +GC+ PD
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL-PD 402
Query: 599 EVHFQ 603
V++
Sbjct: 403 IVNYN 407
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 38/258 (14%)
Query: 112 LSIRFMVSLLSRETDWQRALALL-DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
+S ++ L + W+ L+ +EK P+V Y++++ + R + A L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKL 230
M+++GL PD Y+Y LI F + G LD ++ +L+ M D D+V Y+ ++ K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 231 GDYSKAISIFARLK-----------------------------------ASSIAPDLIAY 255
G +A+ IF +L ++ I PD I Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
NSMI+ + + EA LL +MR P V+Y+ +L + R +A++V M
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 316 AKCPLDLTTCNIMIDVYG 333
C + TT ++I+ G
Sbjct: 537 NGCRPNETTYTVLIEGIG 554
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/563 (23%), Positives = 255/563 (45%), Gaps = 50/563 (8%)
Query: 109 QRQLSIRFMVSLLSRETDWQRALALLD-WINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
Q+ S+ +V L W+ +L+ W+ A + + V++R + R L
Sbjct: 73 QKDWSVSEVVDRLMALNRWEEVDGVLNSWVGRFARKN-----FPVLIRELSRRGCIELCV 127
Query: 168 GLFDEMR-QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
+F M+ Q+ Y+ +I +H +D + +M++ + D Y LI
Sbjct: 128 NVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA 187
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+ G + A+++ + ++IAP YN++IN G + +REA + ++M DNGV PD
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+++ +L+ Y ++ +ALS F M AK D TT NI+I +L + LF
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 347 SMRKM-------------------------------------GIEPNVVSYNTLLRVYGE 369
SMR+ G++PN+VSYN L+ Y
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ G A+ + +++ G+ +VV+Y ++N YG+S + KA + M+ +PN +T
Sbjct: 368 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 427
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+ +I + G L A +F+++ G++ + V T++ A R+ + +L +
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 490 -RPDNI---PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
R N+ +AI A +E+A +++ D F +I+ R KY
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QM 604
+ ++M ++ V + VL A+ K + +A+++++Q+ GC PD + + M
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE-PDVIAYTSM 606
Query: 605 LSLYGARKDFTMVESLFEKLDSN 627
L Y A + + LF ++++N
Sbjct: 607 LHAYNASEKWGKACELFLEMEAN 629
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 227/511 (44%), Gaps = 34/511 (6%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ +W+ AL + + + + P + +N+VL +Q+ A F+ M+
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS--GDLVLYSNLIELSRKLGDYS 234
+ PD T++ +I K G +L M + D+V +++++ L G+
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
++F + A + P++++YN+++ + + A +L +++ NG+ PD VSY+ LL
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
Y + + +A VF M + ++ T N +ID YG + E +F M + GI+
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
PNVVS TLL S+ + Q +G+ N YN+ I Y + E EKA L
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
Q M+ ++ +++T++ +IS + K A +++ + + + +Y +++ AY +
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
G +V EA +F Q AG D+ + M
Sbjct: 578 QG-------------------------------QVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC 594
++ Y+ ++K+ E+F +M G PDS + ++ AF K + L + ++
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 595 VFPDEVHFQMLSLYGARKDFTMVESLFEKLD 625
F V F++ S +++ L + +D
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 151/312 (48%), Gaps = 10/312 (3%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
AYN + + + A + A L+ MR++ + D T++ LI+ + ++ +L++M
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
E ++ +YS+++ K G ++A SIF ++K + PD+IAY SM++ + ++ +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+A L EM NG+ PD+++ S L+ + + + M + + P T +
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF---TGAVF 673
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY-----NTLLRVYGESELFGEAIHLFRLM 383
+++ + ++E R ++ M +P + S N +L ++G+S + LF +
Sbjct: 674 FEIFSACNTLQEWKRAIDLIQMM--DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKI 731
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
GV N+ TY ++ K +++ M GIQP+ Y IIS E++ +
Sbjct: 732 IASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI 791
Query: 444 DRAAMLFQKLRS 455
+ ++ QKL S
Sbjct: 792 EFEPLIRQKLES 803
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 167/417 (40%), Gaps = 71/417 (17%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL++L I + + P V +Y +L + R++Q A +F MR+ P+ TY+ LI
Sbjct: 374 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+G +G L ++ +QMEQD + ++V L+ + ++ + ++ I
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 492
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS-------------------- 289
+ AYNS I + A +A L Q MR V D+V+
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 552
Query: 290 ---------------YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
YS++L Y + EA S+F++M A C D+ M+ Y
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES------------------------ 370
+ LF M GIEP+ ++ + L+R + +
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAV 672
Query: 371 --ELFG---------EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
E+F AI L ++M ++ N M++++GKS + E L ++
Sbjct: 673 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 732
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+G+ N TY+ ++ G + + + + +G+Q +Y+ +I ER+
Sbjct: 733 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSA 789
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 186/384 (48%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
+S+ +V +E + AL + ++ + + P + +N ++ + +A A + D
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
M Q G PD YTY+++I+ K G + ++ L QM + S + V Y+ LI K
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+A + L + I PD+ +NS+I + R A L +EMR G PD +Y+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
L+ + EAL++ +M + C + T N +ID + + + E + +F M
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
G+ N V+YNTL+ +S +A L M +G + + TYN+++ + + + +KA
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
+++Q M +NG +P+ +TY T+IS KAG+++ A+ L + ++ G+ + Y +I
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 472 YERAGLVAHAKRLLHELKRPDNIP 495
R A L E+ + P
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAP 643
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 211/479 (44%), Gaps = 45/479 (9%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST----------------- 187
P V +NV+++ + RA Q A + ++M GL PD T++T
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 188 -----------------LITH-FGKHGLLDSSLFWLQQME-QDNVSGDLVLYSNLIELSR 228
+I H F K G ++ +L ++Q+M QD D ++ L+
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K G AI I + PD+ YNS+I+ K +EA +L +M P+TV
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+Y+TL++ + EA + + D+ T N +I LF M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
R G EP+ +YN L+ EA+++ + M+ G ++V+TYNT+I+ + K+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+A + EM+ +G+ N++TY+T+I K+ +++ AA L ++ G + D+ Y ++
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 469 IVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
+ + R G + A ++ + PD + T I L +A RVE A+ + R G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL-----NAFGKLRE 578
+ +I R +K T + +F +M E P V ++ N G +RE
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 217/503 (43%), Gaps = 6/503 (1%)
Query: 131 LALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLIT 190
L+++DW+ ++ P YN +L ++ L +M G+ PD T++ LI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 191 HFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAP 250
+ L ++ L+ M + D ++ +++ + GD A+ I ++ +
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRD-NGVCPDTVSYSTLLAIYVDNERFVEALSV 309
++ N +++ F K +A +QEM + +G PD +++TL+ A+ +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
M D+ T N +I +L V+E + M PN V+YNTL+ +
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
EA L R++ KG+ +V T+N++I + H A L +EM++ G +P+ T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+ +I GKLD A + +++ SG + Y T+I + +A A+ + E++
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 490 ----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
+++ T I L ++RRVE+A + Q G+ D + ++ + R
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC-VFPDEVHFQM 604
++ + M G PD +++ K E A L I +G + P + +
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 605 LSLYGARKDFTMVESLFEKLDSN 627
L+ RK + E L+ N
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQN 640
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 207/458 (45%), Gaps = 8/458 (1%)
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
++ N S + LY ++ + G + I +K+S + +I + + +L
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 269 REARLLLQEMRDN-GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
E ++ M D G+ PDT Y+ +L + VD ++M+ D++T N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+I + H + + M G+ P+ ++ T+++ Y E A+ + M + G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN-NGIQPNAITYSTIISIWEKAGKLDRA 446
+ V+ N +++ + K E A N IQEM N +G P+ T++T+++ KAG + A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMV 502
+ + G D Y ++I + G V A +L ++ P+ + T I
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
L + +VEEAT + R + G + D+ F +I + + +E+FE+MR G PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFE 622
+++++ + ++A + Q+ GC + ++ + E +F+
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 623 KLDSNP-NINKKELHLVVSGIYERADRLNDASRIMNRM 659
+++ + + N + ++ G+ ++ R+ DA+++M++M
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLC-KSRRVEDAAQLMDQM 531
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 218/461 (47%), Gaps = 5/461 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
++ YNV++ + + ++ A G+ ++ + L PD TY TL+ K + L +
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M S S+L+E RK G +A+++ R+ ++P+L YN++I+ K
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+ F EA LL M G+ P+ V+YS L+ ++ + ALS EM D L +
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N +I+ + + + + M +EP VV+Y +L+ Y +A+ L+ M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG+ ++ T+ T+++ ++ A L EM ++PN +TY+ +I + + G + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL-- 503
A +++ G+ D Y+ +I G + AK + L + + E L
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 504 --ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
R ++EEA V ++ G D+ +G +I+ ++K + ++M + G P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF 602
D + +++A K +F++A ++ + +EGCV P+EV +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-PNEVTY 720
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 242/566 (42%), Gaps = 85/566 (15%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
++ + ++ +V L + + AL L+ + + + SP++F YN ++ ++ + +++H A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV-SPNLFVYNALIDSLCKGRKFHEA 386
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
LFD M + GL P+ TYS LI F + G LD++L +L +M + + Y++LI
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K GD S A A + + P ++ Y S++ + +A L EM G+ P
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD--RL 344
+++TLL+ +A+ +F+EM + + T N+MI+ Y EEGD +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY-----CEEGDMSKA 561
Query: 345 FWSMRKM---GIEPNVVSYNTLL------------RVY------GESEL----------- 372
F +++M GI P+ SY L+ +V+ G EL
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 373 ------FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
EA+ + + M ++GV ++V Y +I+ K + + L++EM + G++P+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
+ Y+++I K G A ++ + + G ++V Y +I +AG V A+ L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 487 ELKRPDNIPRETA---------------------------------------IMVLARAR 507
+++ ++P + I R
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
R+EEA+ + + G D + MIN R +E++ M E G PD
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 568 LVLNAFGKLREFEKADALYSQIHDEG 593
+++ E KA L +++ +G
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 164/352 (46%), Gaps = 2/352 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ YNV++ A EM ++G+ PD Y+Y LI G + +
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ + + N + + Y+ L+ + G +A+S+ + + DL+ Y +I+ K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
K + LL+EM D G+ PD V Y++++ F EA ++ M + C + T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL-FGEAIHLFRLM 383
+I+ + V E + L M+ + PN V+Y L + + E+ +A+ L +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
K G+ N TYN +I + + E+A+ LI M +G+ P+ ITY+T+I+ + +
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
+A L+ + G++ D+V Y T+I AG + A L +E+ R IP
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/557 (21%), Positives = 236/557 (42%), Gaps = 45/557 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V + +L +++ + + LA LF++M G+ PD Y Y+ +I + L +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ ME ++V Y+ LI+ K +A+ I L + PD++ Y +++ K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ F ++ EM P + S+L+ + EAL++ + D +L
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +ID + E + LF M K+G+ PN V+Y+ L+ ++ A+ M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
G++ +V YN++IN + K + A + EM N ++P +TY++++ + GK++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-------------- 490
+A L+ ++ G+ + T++ RAGL+ A +L +E+
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 491 -------------------------PDNIPRETAIMVLARARRVEEATWVFRQAFAAG-- 523
PD I L + EA VF G
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNC 608
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
E+N+I G +++ + R K + V ++M + G D ++++ K ++ +
Sbjct: 609 ELNEICYTG-LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 584 ALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNI-NKKELHLVVSGI 642
L ++HD G D ++ M+ DF +++ + + + N+ V++G+
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 643 YERADRLNDASRIMNRM 659
+A +N+A + ++M
Sbjct: 728 C-KAGFVNEAEVLCSKM 743
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 12/293 (4%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW--LQ 206
Y +L R + A + EM QRG+ D Y LI KH D LF+ L+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK--DRKLFFGLLK 671
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+M + D V+Y+++I+ K GD+ +A I+ + P+ + Y ++IN KA
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIY----VDNERFVEALSVFSEMNDAKCPLDL 322
EA +L +M+ P+ V+Y L I VD ++ VE + + A +
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA----NT 787
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T N++I + + +EE L M G+ P+ ++Y T++ +AI L+
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
M +KG++ + V YNT+I+ + E KAT L EM G+ PN T T S
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 215/472 (45%), Gaps = 11/472 (2%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+P+V + ++ + + A LF M QRG+ PD YSTLI + K G+L
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
Q V D+V++S+ I++ K GD + A ++ R+ I+P+++ Y +I
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ EA + ++ G+ P V+YS+L+ + +++ +M P D+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+++D + ++ R M I NVV +N+L+ + F EA+ +FRLM
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 384 QKKGVQQNVVTYNTMINI------YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
G++ +V T+ T++ + + K ++ L MQ N I + + +I +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDN 493
K +++ A+ F L ++ D V Y TMI Y + A+R+ LK P+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ I VL + ++ A +F G + +GC+++ +S++ ++FE+
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
M+E G P +++++ K ++A ++ Q D + PD V + +L
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK-LLPDVVAYAIL 753
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 194/396 (48%), Gaps = 45/396 (11%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
SP+V Y ++++ + + + + A G++ ++ +RG+ P TYS+LI F K G L S
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ M + D+V+Y L++ K G A+ ++ SI +++ +NS+I+ +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE------ALSVFSEMNDAK 317
+ F EA + + M G+ PD +++T++ + + + F + L +F M K
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL------LRVYGESE 371
D+ CN++I + + H +E+ + F ++ + +EP++V+YNT+ LR E+E
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 372 ---------LFGE--------------------AIHLFRLMQKKGVQQNVVTYNTMINIY 402
FG AI +F +M +KG + N VTY +++ +
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
KS++ E + L +EMQ GI P+ ++YS II K G++D A +F + + + D
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNI 494
V Y +I Y + G + A L + R PD++
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 172/389 (44%), Gaps = 42/389 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ Y+ ++ + L+++M + G PD Y L+ K GL+ ++ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY--------- 255
+M ++ ++V++++LI+ +L + +A+ +F + I PD+ +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 256 --------------------------------NSMINVFGKAKLFREARLLLQEMRDNGV 283
N +I++ K +A + + +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Query: 284 CPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
PD V+Y+T++ Y R EA +F + + T I+I V + + ++ R
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
+F M + G +PN V+Y L+ + +S + LF MQ+KG+ ++V+Y+ +I+
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
K ++ATN+ + + + P+ + Y+ +I + K G+L AA+L++ + +GV+ D +
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPD 492
L Q + Y + +H+ PD
Sbjct: 784 L-QRALSEYNPPKWLMSKGVWVHDKPMPD 811
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/630 (23%), Positives = 263/630 (41%), Gaps = 121/630 (19%)
Query: 76 MFLDHSIDMDELLASISSTQN--EQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALAL 133
+ LDH + + +I+ N E + +Y + +I+ V L +D + L L
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK---AIQAAVKL----SDVGKGLEL 201
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
+ + +Y PSVF YNV++ + + K+ + A LFDEM R L P TY+TLI +
Sbjct: 202 FNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
K G+ K+ + R+KA I P LI
Sbjct: 261 KA-----------------------------------GNPEKSFKVRERMKADHIEPSLI 285
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
+N+++ KA + +A +L+EM+D G PD ++S L Y NE+ AL V+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 314 NDAKCPLDLTTCNIMIDVY---GQLHMVEE------------------------------ 340
D+ ++ TC+I+++ G++ EE
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 341 -GDRL-FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTM 398
G R+ +M K G++P+ ++YN L+R + E A M+ KGV +V TYN +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 399 INIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
I YG+ E +K ++++EM++NG PN ++Y T+I+ K KL A ++ + + GV
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 459 QIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQ 518
+Y +I G + K +E+A ++
Sbjct: 526 SPKVRIYNMLI-----DGCCSKGK--------------------------IEDAFRFSKE 554
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
G ++ + +I+ S K + ++ ++ G PD +++ +G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 579 FEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLV 638
++ ALY ++ G + P + +L ++ + E LF ++ P++ LV
Sbjct: 615 VQRCIALYEEMKRSG-IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDL------LV 667
Query: 639 VSGI---YERADRLNDASRIMNRMNHKAIG 665
+G+ Y + A + +M K+IG
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 174/374 (46%), Gaps = 31/374 (8%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+ + +++L + + + A + +GL P+ Y+T+I + + G L + +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ ME+ + D + Y+ LI +LG+ A ++K ++P + YN +I +G+
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
F + +L+EM DNG P+ VSY TL+ + +EA V +M D +
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N++ID +E+ R M K GIE N+V+YNTL+ + EA L + +
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA----- 440
KG++ +V TYN++I+ YG + ++ L +EM+ +GI+P TY +IS+ K
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 441 --------------------------GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
G +++A L +++ + +D+ Y ++I+ +
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 475 AGLVAHAKRLLHEL 488
G + + L+ E+
Sbjct: 713 VGKLCEVRSLIDEM 726
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 199/451 (44%), Gaps = 11/451 (2%)
Query: 141 ALYSPSV---FAYNVVLRNVL--RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
+L SPS+ F+Y +L +VL +K A LF +R G+ P + + L+ H K
Sbjct: 100 SLSSPSLKHDFSY--LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKT 157
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
++ + + + +Y I+ + KL D K + +F R+K I P + Y
Sbjct: 158 KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIY 217
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
N +I+ K K +A L EM + P ++Y+TL+ Y ++ V M
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
L T N ++ + MVE+ + + M+ +G P+ +++ L Y +E
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
A+ ++ GV+ N T + ++N K + EKA ++ G+ PN + Y+T+I
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
+ + G L A M + + G++ D + Y +I + G + +A++ ++++K P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 496 R-ET-AIMVLARARRVE--EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
ET I++ R+ E + + ++ G + ++ +G +IN + K V
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
M + G P + ++++ + E A
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 176/382 (46%), Gaps = 17/382 (4%)
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
+ ++K+ EA L +R+ G+ P + S + LL V ++F ++VF + ++
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES---- 173
Query: 321 DLTTCNIM----IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
D M I +L V +G LF M+ I P+V YN L+ + + +A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
LF M + + +++TYNT+I+ Y K+ EK+ + + M+ + I+P+ IT++T++
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
KAG ++ A + ++++ G D + + Y + A A ++E +
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS-SNEKAEAALGVYETAVDSGVKM 352
Query: 497 E---TAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+I++ L + ++E+A + + A G V + ++ MI+ Y R
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGAR 611
E M + G PD ++ F +L E E A+ +++ +G E + ++ YG +
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 612 KDFTMVESLFEKLDSN---PNI 630
+F + ++++ N PN+
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNV 494
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 153/351 (43%), Gaps = 38/351 (10%)
Query: 122 SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPD 181
R+ ++ + +L + + P+V +Y ++ + + + A + +M RG++P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 182 RYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
Y+ LI G ++ + + ++M + + +LV Y+ LI+ G S+A +
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV-------------C---- 284
+ + PD+ YNS+I+ +G A + L +EM+ +G+ C
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 285 --------------PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
PD + Y+ +L Y + +A ++ +M + LD TT N +I
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI- 707
Query: 331 VYGQLHMVE--EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
GQL + + E L M +EP +YN +++ + E + + A +R MQ+KG
Sbjct: 708 -LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
+V N +++ + ++A +I EM NG +T +S EK
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEM--NGRMLGDVTVDEDLSATEK 815
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 12/336 (3%)
Query: 337 MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYN 396
M+ E LF+++R GI P+ S LL +++ F I++F + + + + Y
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
I K + K L M+++ I P+ Y+ +I K +++ A LF ++ +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEA 512
+ + Y T+I Y +AG + ++ +K P I T + L +A VE+A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
V ++ G V D F + + YS N+K + V+E + G ++ +++LNA
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 573 FGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNIN 631
K + EKA+ + + +G V P+EV + M+ Y + D E ++
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ---G 419
Query: 632 KKELHLVVSGIYERADRLND---ASRIMNRMNHKAI 664
K HL + + R L + A + +N+M K +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ LS A LL I+ K L P VF YN ++ A L++EM++
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGL-KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 177 GLAPDRYTYSTLITHFGKHGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G+ P TY LI+ K G+ L LF ++ D L++Y+ ++ GD K
Sbjct: 629 GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPD-----LLVYNGVLHCYAVHGDMEK 683
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFR--EARLLLQEMRDNGVCPDTVSYSTL 293
A ++ ++ SI D YNS+I G+ K+ + E R L+ EM + P+ +Y+ +
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLI--LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
+ + + + ++ A + EM + LD+ N ++
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 212/455 (46%), Gaps = 5/455 (1%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P+ AY ++ + LF +M++ G P + ++TLI F K G +DS+L
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L +M+ ++ D+VLY+ I+ K+G A F ++A+ + PD + Y SMI V
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
KA EA + + + N P T +Y+T++ Y +F EA S+ +
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
N ++ ++ V+E ++F M+K PN+ +YN L+ + + A L
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
MQK G+ NV T N M++ KS + ++A + +EM P+ IT+ ++I K G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRET 498
+D A +++K+ S + + ++Y ++I + G K ++++ PD T
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ + +A E+ +F + A V D + +I+ + E+F M+E G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
D+ +V++ F K + KA L ++ +G
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 221/465 (47%), Gaps = 6/465 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PSV AYN +L + + + A +F+EM++ AP+ TY+ LI + G LD++
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
M++ + ++ + +++ K +A ++F + PD I + S+I+ GK
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+A + ++M D+ +++ Y++L+ + ++ R + ++ +M + C DL
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +D + E+G +F ++ P+ SY+ L+ ++ E LF M+
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
++G + YN +I+ + K + KA L++EM+ G +P +TY ++I K +LD
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAI 500
A MLF++ +S ++++ V+Y ++I + + G + A +L EL + P + +
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
L +A + EA F+ + +G +IN + +K+ +++M++ G
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
P + +++ K +A AL+ + G V PD + +
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAM 803
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 192/444 (43%), Gaps = 71/444 (15%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ +L R A L D + + L+ P+V N+++ + ++++ A +F+EM +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLF-PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 177 GLAPDRYTYSTLITHFGKHG-----------LLDSSL-------------FWLQQMEQD- 211
PD T+ +LI GK G +LDS F+ ++D
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 212 ----------NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPD---------- 251
N S DL L + ++ K G+ K ++F +KA PD
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 252 LI-------------------------AYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
LI AYN +I+ F K +A LL+EM+ G P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+Y +++ +R EA +F E + L++ + +ID +G++ ++E +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
+ + G+ PN+ ++N+LL ++E EA+ F+ M++ N VTY +IN K
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ KA QEMQ G++P+ I+Y+T+IS KAG + A LF + +++G D Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 467 TMIVAYERAGLVAHAKRLLHELKR 490
MI A L E +R
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRR 825
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 230/535 (42%), Gaps = 54/535 (10%)
Query: 141 ALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDS 200
A + PSV ++ ++A + + + MR+ P Y+TLI F D
Sbjct: 127 AGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 186
Query: 201 SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN 260
L QQM++ + L++ LI K G A+S+ +K+SS+ D++ YN I+
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
FGK A E+ NG+ PD V+Y++++ + R EA+ +F +
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL------- 299
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
E+ R+ P +YNT++ YG + F EA L
Sbjct: 300 ------------------EKNRRV----------PCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+ KG +V+ YN ++ K + ++A + +EM+ + PN TY+ +I + +A
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRA 390
Query: 441 GKLDRA---------AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 491
GKLD A A LF +R+ + +D++ + + A A + + +++ P
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL---DEA--CAMFEEMDYKVCTP 445
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
D I + I L + RV++A V+ + + + V+ +I + + + + +++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML--SLYG 609
+ M PD ++ ++ K E EK A++ +I V PD + +L L
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIK 564
Query: 610 ARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
A E + + ++ + ++V+ G + + ++N A +++ M K
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDG-FCKCGKVNKAYQLLEEMKTKGF 618
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 154/315 (48%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P +Y++++ +++A + + LF M+++G D Y+ +I F K G ++ +
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L++M+ +V Y ++I+ K+ +A +F K+ I +++ Y+S+I+ F
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
GK EA L+L+E+ G+ P+ ++++LL V E EAL F M + KC +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T I+I+ ++ + + M+K G++P+ +SY T++ ++ EA LF
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+ G + YN MI A +L +E + G+ + T ++ K
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDC 847
Query: 443 LDRAAMLFQKLRSSG 457
L++AA++ LR +G
Sbjct: 848 LEQAAIVGAVLRETG 862
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 226/478 (47%), Gaps = 7/478 (1%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y ++ +++ L E AL L+D + E + P + N ++ + + + A
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG-HKPDLITINTLVNGLCLSGKEAEA 212
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
L D+M + G P+ TY ++ K G ++ L++ME+ N+ D V YS +I+
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K G A ++F ++ I ++I YN +I F A + + LL++M + P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V++S L+ +V + EA + EM D T +ID + + + +++ +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M G +PN+ ++N L+ Y ++ + + LFR M +GV + VTYNT+I + +
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ A L QEM + + PN +TY ++ G+ ++A +F+K+ S +++D +Y
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 467 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+I A V A L L +P I L + + EA +FR+
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF--GKLRE 578
G D + +I + + T V++ E+++ G+ D++ I +V++ G+L++
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKK 630
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 222/481 (46%), Gaps = 5/481 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+ S +++ + LAL + K + + +++ ++++ R ++ LA ++ +
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGI-AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL 152
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G P+ T+STLI G + +L + +M + DL+ + L+ G ++A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + ++ P+ + Y ++NV K+ A LL++M + + D V YS ++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ A ++F+EM ++ T NI+I + ++G +L M K I PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+++ L+ + + EA L + M +G+ + +TY ++I+ + K +KA ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
M + G PN T++ +I+ + KA ++D LF+K+ GV D V Y T+I + G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 477 LVAHAKRLLHEL---KRPDNIPRETAIM-VLARARRVEEATWVFRQAFAAGEVNDISVFG 532
+ AK L E+ K P NI ++ L E+A +F + + DI ++
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
+I+ K + ++F + G P +++ K +A+ L+ ++ ++
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 593 G 593
G
Sbjct: 573 G 573
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 199/460 (43%), Gaps = 41/460 (8%)
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
D I+ + L P+V ++ + + + KQ+ L L +M +G+A + YT S +I F +
Sbjct: 78 DMIHSRPL--PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 195 HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIA 254
L + + ++ + + + +S LI G S+A+ + R+ PDLI
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
N+++N + EA LL+ +M + G P+ V+Y +L + + + A+ + +M
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+ LD +I+ID + K G N
Sbjct: 256 ERNIKLDAVKYSIIID----------------GLCKHGSLDN------------------ 281
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A +LF M+ KG+ N++TYN +I + + + L+++M I PN +T+S +I
Sbjct: 282 -AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+ K GKL A L +++ G+ D + Y ++I + + + A +++ +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 495 PRETAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P +L +A R+++ +FR+ G V D + +I + K E+
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
F++M P+ ++L+ E EKA ++ +I
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 169/384 (44%), Gaps = 39/384 (10%)
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P + +S L + +++ L++ +M +L T +IMI+ + + +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
+ K+G EPN ++++TL+ EA+ L M + G + +++T NT++N
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
S + +A LI +M G QPNA+TY ++++ K+G+ A L +K+ +++D V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAF 520
Y +I + G + +A L +E++ + I I A R ++ + R
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
++ F +I+ + + K E+ ++M G PD+ +++ F K +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 581 KADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVS 640
KA+ + + +GC +PNI + +++++
Sbjct: 386 KANQMVDLMVSKGC--------------------------------DPNI--RTFNILIN 411
Query: 641 GIYERADRLNDASRIMNRMNHKAI 664
G Y +A+R++D + +M+ + +
Sbjct: 412 G-YCKANRIDDGLELFRKMSLRGV 434
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 9/433 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P +N V+ + + + + A + + M RG APD TY L+ K G +D++
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS-SIAPDLIAYNSMINVFG 263
++ + ++V+++ LI G A ++ + + S I PD+ YNS+I +
Sbjct: 345 FYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K L A +L +MR+ G P+ SY+ L+ + + EA +V +EM+ +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
N +I + + H + E +F M + G +P+V ++N+L+ E + A+ L R M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+GV N VTYNT+IN + + E ++A L+ EM G + ITY+++I +AG++
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETA 499
D+A LF+K+ G + +I R+G+V A E+ PD + +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I L RA R+E+ +FR+ A G D F +++ + + + ++ E G+
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 560 FPDSNVIALVLNA 572
P+ +++L +
Sbjct: 701 VPNHRTWSILLQS 713
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 211/490 (43%), Gaps = 71/490 (14%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ +YNVVL ++ +A +F +M R + P +T+ ++ F +DS+L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L+ M + + V+Y LI K ++A+ + + PD +N +I K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSY-------------------------------STL 293
EA ++ M G PD ++Y +TL
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 294 LAIYVDNERFVEALSVFSEM------------------------------------NDAK 317
+ +V + R +A +V S+M +
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
C ++ + I++D + +L ++E + M G++PN V +N L+ + + EA+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+FR M +KG + +V T+N++I+ + E + A L+++M + G+ N +TY+T+I+ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDN 493
+ G++ A L ++ G +D++ Y ++I RAG V A+ L ++ R P N
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
I I L R+ VEEA ++ G DI F +IN R + + + +F K
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 554 MREVGYFPDS 563
++ G PD+
Sbjct: 660 LQAEGIPPDT 669
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 35/336 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V YN ++ + LA + +MR +G P+ Y+Y+ L+ F K G +D +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M D + + V ++ LI K +A+ IF + PD+ +NS+I+ +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ A LL++M GV +TV+Y+TL+ ++ EA + +EM PLD T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 325 -----------------------------------CNIMIDVYGQLHMVEEGDRLFWSMR 349
CNI+I+ + MVEE M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
G P++V++N+L+ + + + +FR +Q +G+ + VT+NT+++ K
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
A L+ E +G PN T+S ++ LDR
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 224/543 (41%), Gaps = 18/543 (3%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+ LL + ++ L W + Y S Y V++ + ++ L +M+
Sbjct: 81 LYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQD-NVSGDLVLYSNLIELSRKLGDYSK 235
G+ + +++ + K G + + +M + Y+ ++E+ +
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A ++F + + I P L + ++ F A LL++M +G P++V Y TL+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
R EAL + EM C D T N +I + + E ++ M G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ ++Y L+ + A LF + K +V +NT+I+ + + A ++
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 416 QEMQNN-GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+M + GI P+ TY+++I + K G + A + +R+ G + + Y ++ + +
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 475 AGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
G + A +L+E+ +P+ + I + R+ EA +FR+ G D+
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
F +I+ + + + + M G ++ ++NAF + E ++A L +++
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 591 DEGCVFPDEVHFQMLSLYGARK-DFTMVESLFEKL------DSNPNINKKELHLVVSGIY 643
+G DE+ + L R + SLFEK+ SN + N L SG+
Sbjct: 557 FQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 644 ERA 646
E A
Sbjct: 616 EEA 618
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 179/451 (39%), Gaps = 44/451 (9%)
Query: 189 ITHFGKHGLLDSSLFWLQQME-------QDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
IT F + LL+ L ME Q+ +Y LI G++ +
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PDTVSYSTLLAIYVDN 300
++K I + S++ + KA + L+ EMR+ C P SY+ +L I V
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
A +VF +M K P L T +++ + ++ ++ L M K G PN V Y
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
TL+ + EA+ L M G + T+N +I K +A ++ M
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL--------------------------- 453
G P+ ITY +++ K G++D A LF ++
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 454 -----RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL----A 504
S G+ D Y ++I Y + GLV A +LH+++ P + +L
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 505 RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
+ +++EA V + A G + F C+I+ + + + VE+F +M G PD
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 565 VIALVLNAFGKLREFEKADALYSQIHDEGCV 595
+++ ++ E + A L + EG V
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 229/493 (46%), Gaps = 6/493 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ + + RA L + ++ + P + AY+ ++ +A + H LF + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGI-EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ D +S+ I + K G L ++ ++M +S ++V Y+ LI+ + G +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
++ ++ + P ++ Y+S+I+ F K R L ++M G PD V Y L+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ A+ +M L++ N +ID + +L+ +E ++F M GI+P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V ++ T++RV EA+ LF M K G++ + + Y T+I+ + K ++ L
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
MQ N I + + +I + K +++ A+ F L ++ D V Y TMI Y
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 477 LVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
+ A+R+ LK P+ + I VL + ++ A +F G + +G
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
C+++ +S++ ++FE+M+E G P +++++ K ++A ++ Q D
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 593 GCVFPDEVHFQML 605
+ PD V + +L
Sbjct: 771 K-LLPDVVAYAIL 782
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/562 (22%), Positives = 265/562 (47%), Gaps = 28/562 (4%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
F++ L + + +AL + E+ + + + N VL+ L Q +A L +
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLD 279
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G AP+ T+ TLI F K G +D + + MEQ + DL+ YS LI+ K G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+F++ + D++ ++S I+V+ K+ A ++ + M G+ P+ V+Y+ L+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ R EA ++ ++ + T + +ID + + + G L+ M KMG P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+VV Y L+ + L A+ M + ++ NVV +N++I+ + + ++A +
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+ M GI+P+ T++T++ + G+L+ A LF ++ G++ D + Y T+I A+ +
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK- 578
Query: 476 GLVAHAKRL----LHELKRPDNIPRETAIM-----VLARARRVEEATWVFRQAFAAGEVN 526
H K L +L + + I + A+ +L + R+E+A+ F
Sbjct: 579 ----HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
DI + MI Y ++ +FE ++ + P++ + ++++ K + + A ++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 587 SQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDS---NPNINKKELHLVVSGI 642
S + ++G P+ V + ++ + D LFE++ +P+I +++ G+
Sbjct: 695 SIMAEKGSK-PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI--VSYSIIIDGL 751
Query: 643 YERADRLNDASRIMNRMNHKAI 664
+R R+++A+ I H+AI
Sbjct: 752 CKRG-RVDEATNIF----HQAI 768
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 184/389 (47%), Gaps = 39/389 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ Y+ ++ + L+++M + G PD Y L+ K GL+ ++ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+M ++ ++V++++LI+ +L + +A+ +F + I PD+ + +++ V
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L M G+ PD ++Y TL+ + + + L +F M K D+
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL------LRVYGESE------- 371
CN++I + + H +E+ + F ++ + +EP++V+YNT+ LR E+E
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 372 --LFGE--------------------AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
FG AI +F +M +KG + N VTY +++ + KS++ E
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+ L +EMQ GI P+ ++YS II K G++D A +F + + + D V Y +I
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 470 VAYERAGLVAHAKRLLHELKR----PDNI 494
Y + G + A L + R PD++
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 168/347 (48%), Gaps = 1/347 (0%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V +N ++ R ++ A +F M G+ PD T++T++ G L+ +LF
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M + + D + Y LI+ K + + +F ++ + I+ D+ N +I++ K
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+A + + + PD V+Y+T++ Y R EA +F + + T
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
I+I V + + ++ R+F M + G +PN V+Y L+ + +S + LF MQ+
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG+ ++V+Y+ +I+ K ++ATN+ + + + P+ + Y+ +I + K G+L
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD 492
AA+L++ + +GV+ D +L Q + Y + +H+ PD
Sbjct: 795 AALLYEHMLRNGVKPDDLL-QRALSEYNPPKWLMSKGVWVHDKPMPD 840
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 208/439 (47%), Gaps = 4/439 (0%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
+WQ+ +W+ K+L+ YNV ++++ +Q+ L + EM + G+ D TY
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
ST+IT + L + ++ W ++M + + D V YS ++++ K G + +S++ R A
Sbjct: 225 STIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVA 284
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
+ PD IA++ + +FG+A + R +LQEM+ V P+ V Y+TLL +
Sbjct: 285 TGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGL 344
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
A S+F+EM +A + T ++ +YG+ + +L+ M+ + + YNTLL
Sbjct: 345 ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN 404
Query: 366 VYGESELFGEAIHLFRLMQKKGVQ--QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
+ + L EA LF M K+ VQ + +Y M+NIYG + EKA L +EM G+
Sbjct: 405 MCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
Q N + + ++ KA ++D +F GV+ D L ++ A++
Sbjct: 464 QVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEK 523
Query: 484 LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF-GCMINLYSRNK 542
++ L+R + +++ E F+ A +V F C+I++ N
Sbjct: 524 VMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNN 583
Query: 543 KYTNVVEVFEKMREVGYFP 561
++ E+ G +P
Sbjct: 584 RHERAHELLYLGTLFGLYP 602
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 173/362 (47%), Gaps = 6/362 (1%)
Query: 230 LGDYSKAISIFARLKASSIAP-DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
L ++ K + F +K+ S+ P + I YN + + F+ + EM +GV D +
Sbjct: 163 LREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNI 222
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+YST++ + +A+ F M D T + ++DVY + VEE L+
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
G +P+ ++++ L +++GE+ + ++ + M+ V+ NVV YNT++ G++ +
Sbjct: 283 VATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKP 342
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A +L EM G+ PN T + ++ I+ KA A L++++++ +D +LY T+
Sbjct: 343 GLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTL 402
Query: 469 IVAYERAGLVAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
+ GL A+RL +++K RPDN + + + E+A +F + AG
Sbjct: 403 LNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
++ C++ + K+ +VV VF+ + G PD + +L+ E A+
Sbjct: 463 VQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAE 522
Query: 584 AL 585
+
Sbjct: 523 KV 524
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 136/292 (46%), Gaps = 35/292 (11%)
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
Q ++EE + M K G+E + ++Y+T++ L+ +AI F M K G+ + V
Sbjct: 201 QFQLIEE---MALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEV 257
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
TY+ ++++Y KS + E+ +L + G +P+AI +S + ++ +AG D + Q++
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEAT 513
+S V+ + V+Y T++ A RAG A+ L +E+ P E + L
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL---------- 367
Query: 514 WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
+ +Y + + + ++++E+M+ + D + +LN
Sbjct: 368 ---------------------VKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMC 406
Query: 574 GKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKL 624
+ E+A+ L++ + + PD + ML++YG+ LFE++
Sbjct: 407 ADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 1/378 (0%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
S+ +V L R + +++ L+ + K + P + YN ++ ++ + + G+
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGI-KPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M++ G+ ++ TY+ L+ K+G + + +M + + D+ +Y++LI + + G+
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+A +F L ++P Y ++I+ K A +L+ EM+ GV V ++T
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
L+ Y EA ++ M D+ TCN + + +L +E + + M + G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
++ + VSY L+ VY + EA LF M KGVQ N +TYN MI Y K + ++A
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L M+ NG+ P++ TY+++I A +D A LF ++ G+ + V Y MI
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 473 ERAGLVAHAKRLLHELKR 490
+AG A L E+KR
Sbjct: 585 SKAGKSDEAFGLYDEMKR 602
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 198/431 (45%), Gaps = 39/431 (9%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V++ +V+ + R + + L E +G+ P+ YTY+T+I + K L
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ M++D V + V Y+ L+ELS K G S A +F ++ I D+ Y S+I+ +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+ A LL E+ + G+ P + +Y L+ D C +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALI--------------------DGVCKV----- 377
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
G++ E L M+ G+ V +NTL+ Y + EA ++ +M++
Sbjct: 378 -------GEMGAAE---ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG Q +V T NT+ + + + +++A + M G++ + ++Y+ +I ++ K G ++
Sbjct: 428 KGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEE 487
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIM 501
A LF ++ S GVQ + + Y MI AY + G + A++L ++ PD+ + I
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
A V+EA +F + G + + MI+ S+ K ++++M+ GY
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 562 DSNVIALVLNA 572
D+ V ++ +
Sbjct: 608 DNKVYTALIGS 618
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 106 LYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHL 165
+YN+ ++ ++ L + A L D + E+ + S V Y ++ R
Sbjct: 291 VYNK--VTYTLLMELSVKNGKMSDAEKLFDEMRERGIES-DVHVYTSLISWNCRKGNMKR 347
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A LFDE+ ++GL+P YTY LI K G + ++ + +M+ V+ V+++ LI+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
+ G +A I+ ++ D+ N++ + F + K + EA+ L M + GV
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
TVSY+ L+ +Y EA +F EM+ + T N+MI Y + ++E +L
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
+M G++P+ +Y +L+ ++ EA+ LF M KG+ QN VTY MI+ K+
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
+ ++A L EM+ G + Y+ +I
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 180/404 (44%), Gaps = 8/404 (1%)
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
+F E + M G+ D S L R L +F M D+ + + +
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
I+++ + VE+ +L GI+P +YNT++ Y + F + ++M+K
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
GV N VTY ++ + K+ + A L EM+ GI+ + Y+++IS + G + RA
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNIPR---ETAIMV 502
+LF +L G+ Y +I + G + A+ L++E++ + NI + T I
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
R V+EA+ ++ G D+ + + ++R K+Y + +M E G
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFE 622
+ +++ + K E+A L+ ++ +G V P+ + + ++ +Y K + E+
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG-VQPNAITYNVM-IYAYCKQGKIKEARKL 526
Query: 623 KLDSNPNINKKELHLVVSGIYER--ADRLNDASRIMNRMNHKAI 664
+ + N + + S I+ AD +++A R+ + M K +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 223/478 (46%), Gaps = 7/478 (1%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y ++ +++ L E AL L+D + E + P++ N ++ + + A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG-HKPTLITLNALVNGLCLNGKVSDA 196
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
L D M + G P+ TY ++ K G ++ L++ME+ + D V YS +I+
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K G A ++F ++ D+I Y ++I F A + + LL++M + PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V++S L+ +V + EA + EM D T +ID + + + +++ + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M G PN+ ++N L+ Y ++ L + + LFR M +GV + VTYNT+I + +
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ E A L QEM + ++P+ ++Y ++ G+ ++A +F+K+ S +++D +Y
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 467 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+I A V A L L +PD I L + + EA +FR+
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF--GKLRE 578
G + + +I + T ++ E+++ G+ D++ + +V++ G+L++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 222/488 (45%), Gaps = 5/488 (1%)
Query: 110 RQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
R + + S+++R + L L + K + + +++ ++++ R ++ LA
Sbjct: 71 RLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
++ + G PD T+STLI G + +L + +M + L+ + L+
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
G S A+ + R+ + P+ + Y ++ V K+ A LL++M + + D V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
YS ++ + A ++F+EM D+ +I + ++G +L M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
K I P+VV+++ L+ + + EA L + M ++G+ + VTY ++I+ + K + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
KA +++ M + G PN T++ +I+ + KA +D LF+K+ GV D V Y T+I
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 470 VAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
+ G + AK L E+ RPD + + + L E+A +F + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
DI ++ +I+ K + ++F + G PD +++ K +AD L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 586 YSQIHDEG 593
+ ++ ++G
Sbjct: 550 FRKMEEDG 557
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 5/411 (1%)
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
D ++ Q+M + L+ +S L + + Y + + +++ IA +L + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
IN + + A + ++ G PDTV++STL+ R EAL + M +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
L T N +++ V + L M + G +PN V+Y +L+V +S A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L R M+++ ++ + V Y+ +I+ K + A NL EM+ G + + I Y+T+I +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNI 494
AG+ D A L + + + D V + +I + + G + A+ L E+ + PD +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
+ I + ++++A + + G +I F +IN Y + + +E+F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
G D+ ++ F +L + E A L+ ++ V PD V +++L
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKIL 463
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 221/435 (50%), Gaps = 12/435 (2%)
Query: 92 SSTQNEQELHAVMSLYNQRQLS--IRF--MVSLLSRETDWQRALALLDWINEKALYSPSV 147
SS E+E+ + R L + F ++S +++ ++ ++L + E +
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDL 104
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
++YN+V+ + R ++ +A + +M + G PD T S+LI F + + ++ + +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
ME+ D+V+Y+ +I+ S K+G + A+ +F R++ + D + YNS++ +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
+ +A L+++M + P+ ++++ ++ ++V +F EA+ ++ EM D+ T N
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+I+ V+E ++ M G P+VV+YNTL+ + +S+ E LFR M ++G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+ + +TYNT+I Y ++ + A + M + +PN TYS ++ ++++A
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKAL 401
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVL 503
+LF+ ++ S +++D Y +I + G V A L L +PD + T I
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 504 ARARRVEEATWVFRQ 518
R R+ +++ ++R+
Sbjct: 462 CRKRQWDKSDLLYRK 476
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 212/451 (47%), Gaps = 38/451 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ ++ VL + ++K + L LF M G+ D Y+Y+ +I + +L
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ +M + D+V S+LI + AI + ++++ PD++ YN++I+ K
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
L +A L M +GV D V+Y++L+A + R+ +A + +M
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM----------- 235
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+M D I PNV+++ ++ V+ + F EA+ L+ M
Sbjct: 236 --VMRD----------------------IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
++ V +V TYN++IN ++A ++ M G P+ +TY+T+I+ + K+ ++D
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV-- 502
LF+++ G+ D + Y T+I Y +AG A+ + + NI R +I++
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI-RTYSILLYG 390
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
L RVE+A +F + DI+ + +I+ + + ++F + G PD
Sbjct: 391 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+++ F + R+++K+D LY ++ ++G
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 207/425 (48%), Gaps = 44/425 (10%)
Query: 74 QQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQL--------SIRFMVSLLSRET 125
Q L +D ++L+ I+ ++N V+SL++ ++ S +++ L R +
Sbjct: 62 QSRPLPSIVDFSKVLSKIAKSKN---YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
+ AL+++ + K Y P V + ++ + + A L +M + G PD Y
Sbjct: 119 RFVIALSVVGKM-MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+T+I K GL++ ++ +ME+D V D V Y++L+ G +S A + +
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
I P++I + ++I+VF K F EA L +EM V PD +Y++L+ + R E
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
A + M C D+ T N +I+ + + V+EG +LF M + G+ + ++YNT+++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 366 VYGES-------ELFG-------------------------EAIHLFRLMQKKGVQQNVV 393
Y ++ E+F +A+ LF MQK ++ ++
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
TYN +I+ K E A +L + + G++P+ ++Y+T+IS + + + D++ +L++K+
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 454 RSSGV 458
+ G+
Sbjct: 478 QEDGL 482
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I +F ++ S P ++ ++ +++ K+K + L M G+ D SY+ ++
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
RFV ALSV +M D+ T + +I+ + Q + V + L M +MG P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV YNT++ + L +A+ LF M++ GV+ + VTYN+++ S A L++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+M I PN IT++ +I ++ K GK A L++++ V D Y ++I G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 477 LVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
V AK++L + PD + T I +++RV+E T +FR+ G V D +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 533 CMINLYSRNKKYTNVVEVFEKM 554
+I Y + + E+F +M
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM 375
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 10/299 (3%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+ L D + + + +V YN ++ + + +W A L +M R + P+ T++ +I
Sbjct: 193 AVELFDRMERDGVRADAV-TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
F K G ++ ++M + V D+ Y++LI G +A + +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD++ YN++IN F K+K E L +EM G+ DT++Y+T++ Y R A +
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHM---VEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
FS M+ ++ T +I++ YG L M VE+ LF +M+K IE ++ +YN ++
Sbjct: 372 FSRMDSRP---NIRTYSILL--YG-LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
+ +A LFR + KG++ +VV+Y TMI+ + + + +K+ L ++MQ +G+ P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 8/293 (2%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
LF M GI ++ SYN ++ F A+ + M K G + +VVT +++IN +
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
+ A +L+ +M+ G +P+ + Y+TII K G ++ A LF ++ GV+ D V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQA 519
Y +++ +G + A RL+ ++ D +P I V + + EA ++ +
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 520 FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREF 579
D+ + +IN + + ++ + M G PD ++N F K +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 580 EKADALYSQIHDEGCVFPDEVHFQMLSLY--GARKDFTMVESLFEKLDSNPNI 630
++ L+ ++ G V + ++ Y R D + +F ++DS PNI
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD--AAQEIFSRMDSRPNI 381
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 151/330 (45%), Gaps = 6/330 (1%)
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+EE LF M + P++V ++ +L +S+ + I LF M+ G+ ++ +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+IN + A +++ +M G +P+ +T S++I+ + + ++ A L K+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEAT 513
+ D V+Y T+I + GLV A L ++R D + + + L + R +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 514 WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
+ R V ++ F +I+++ + K++ ++++E+M PD ++N
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 574 GKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNINK 632
++A + + +GC+ PD V + +++ + K LF ++ +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 633 KELHLVVSGIYERADRLNDASRIMNRMNHK 662
+ + Y +A R + A I +RM+ +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 203/420 (48%), Gaps = 14/420 (3%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
++ +N+V+ Q LA + +M + G PDR T +L+ F + + ++ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+M + D+V Y+ +I+ K + A F ++ I P+++ Y +++N +
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
+ +A LL +M + P+ ++YS LL +V N + +EA +F EM D+ T +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
+I+ ++E +++F M G +VVSYNTL+ + +++ + + LFR M ++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G+ N VTYNT+I + ++ + +KA +M GI P+ TY+ ++ G+L++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMV 502
++F+ ++ + +D V Y T+I + G V A L L +PD + T +
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 503 LARARRVEEATWVFRQAFAAGEV-NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
L + E ++ + G + ND ++ I L + E+ +KM GY P
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA---------ELIKKMLSCGYAP 530
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 204/418 (48%), Gaps = 4/418 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ +N +L +++ K++ + L +M G+ D YT++ +I F + +L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + D V +L+ + S A+S+ ++ PD++AYN++I+ K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
K +A +E+ G+ P+ V+Y+ L+ ++ R+ +A + S+M K ++ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ ++D + + V E LF M +M I+P++V+Y++L+ + EA +F LM
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
KG +VV+YNT+IN + K+ E L +EM G+ N +TY+T+I + +AG +D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRETAI 500
+A F ++ G+ D Y ++ G + A + ++++ D + T I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ + +VEEA +F G DI + M++ V ++ KM++ G
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 188/384 (48%), Gaps = 36/384 (9%)
Query: 107 YNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLA 166
Y +++I +V+ R A++L+D + E Y P + AYN ++ ++ + K+ + A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
F E+ ++G+ P+ TY+ L+ +GL +SS
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALV-----NGLCNSS------------------------- 239
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+S A + + + I P++I Y+++++ F K EA+ L +EM + PD
Sbjct: 240 -----RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+YS+L+ ++R EA +F M C D+ + N +I+ + + VE+G +LF
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M + G+ N V+YNTL++ + ++ +A F M G+ ++ TYN ++ +
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E EKA + ++MQ + + +TY+T+I K GK++ A LF L G++ D V Y
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 467 TMIVAYERAGLVAHAKRLLHELKR 490
TM+ GL+ + L ++K+
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 166/364 (45%), Gaps = 14/364 (3%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
AI +F+ + S P ++ +N +++ K K + L ++M G+ D +++ ++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + ALS+ +M D T +++ + + + V + L M ++G +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++V+YN ++ +++ +A F+ +++KG++ NVVTY ++N S A L+
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+M I PN ITYS ++ + K GK+ A LF+++ + D V Y ++I
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI-----N 303
Query: 476 GLVAHAK---------RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
GL H + ++ + D + T I +A+RVE+ +FR+ G V+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+ + +I + + E F +M G PD ++L E EKA ++
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 587 SQIH 590
+
Sbjct: 424 EDMQ 427
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 11/311 (3%)
Query: 117 MVSLLSRETDWQRALALL-DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
+V+ L + W A LL D I +K +P+V Y+ +L ++ + A LF+EM +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
+ PD TYS+LI H +D + M D+V Y+ LI K
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+ +F + + + + YN++I F +A +A+ +M G+ PD +Y+ LL
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
DN +AL +F +M + LD+ T +I + VEE LF S+ G++P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++V+Y T++ L E L+ M+++G+ +N T + + + LI
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG--------DITLSAELI 520
Query: 416 QEMQNNGIQPN 426
++M + G P+
Sbjct: 521 KKMLSCGYAPS 531
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 143/345 (41%), Gaps = 39/345 (11%)
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P V ++ LL+ V +++ +S+ +M DL T NI+I+ + V +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
M K+G EP+ V+ +L+ + +A+ L M + G + ++V YN +I+ K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
+ A + +E++ GI+PN +TY+ +++ + + AA L + + + +
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 465 YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAF 520
Y ++ A+ + G V AK L E+ R PD + + I L R++EA +F
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
+ G C+ ++ S N ++N F K + E
Sbjct: 323 SKG---------CLADVVSYNT--------------------------LINGFCKAKRVE 347
Query: 581 KADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLD 625
L+ ++ G V + ++ + D + F ++D
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 228/505 (45%), Gaps = 74/505 (14%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
SP VFA NV++ + + + A L +R R ++ D TY+T+I+ +HGL D +
Sbjct: 126 SPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQ 182
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA------------------ISIFARLKA 245
+L +M + + D V Y+ LI+ K+G++ +A +S + L A
Sbjct: 183 FLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHA 242
Query: 246 ----------SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
S PD++ ++S+IN K E LLL+EM + V P+ V+Y+TL+
Sbjct: 243 IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ AL+++S+M P+DL +++D + + E ++ F + + P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
NVV+Y L+ ++ A + M +K V NVVTY++MIN Y K E+A +L+
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR--------------------- 454
++M++ + PN TY T+I KAGK + A L +++R
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRI 482
Query: 455 --------------SSGVQIDQVLYQTMIVAYERAG---LVAHAKRLLHELKRP-DNIPR 496
S GV +DQ+ Y ++I + + G + E P D +
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY 542
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
I + + +V A W ++ G DI+ F M+N + ++++++KM+
Sbjct: 543 NVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKS 601
Query: 557 VGYFP---DSNVIALVLNAFGKLRE 578
G P N++ +L GK+ E
Sbjct: 602 CGIKPSLMSCNIVVGMLCENGKMEE 626
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 216/461 (46%), Gaps = 16/461 (3%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL-DSSLFWLQQM 208
++ + R L ++ + A M G+ PD +++LI F +GL+ D +M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
VS D+ + LI K+G S AIS+ L+ I+ D + YN++I+ + L
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
EA L EM G+ PDTVSY+TL+ + FV A ++ E+++ L+L T I+
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTIL 233
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
+ Y LH +EE R M G +P+VV++++++ + E L R M++ V
Sbjct: 234 LSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
N VTY T+++ K+ + A L +M GI + + Y+ ++ KAG L A
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLA 504
F+ L + V Y ++ +AG ++ A+ ++ ++ IP + I
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 505 RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
+ +EEA + R+ V + +G +I+ + K +E+ ++MR +G ++
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 565 VIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
++ ++N ++ ++ L + +G D++++ L
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL-DQINYTSL 510
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 209/503 (41%), Gaps = 60/503 (11%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+ A++LL + ++ + P+ F Y V+ + +A + +A L EMR G+ + Y
Sbjct: 416 EEAVSLLRKMEDQNVV-PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
L+ H + G + ++ M V+ D + Y++LI++ K GD A++ ++
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 248 IAPDLIAYNSMIN---VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
+ D+++YN +I+ FGK A + MR+ G+ PD +++ ++
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVG----ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY---- 360
L ++ +M L +CNI++ + + +EE + M M I PN+ +Y
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 361 -------------------------------NTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
NTL+ + + +A + M+ +G
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
+ VT+N++++ Y KA + M GI PN TY+TII AG +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL----AR 505
+++S G++ D Y +I + G + + + E+ +P+ + VL A
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSR---------NKKYTNVVE----VFE 552
++ +A + ++ G + S + MI+ + NKK + E + E
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKE 890
Query: 553 KMREVGYFPDSNVIALVLNAFGK 575
+ E GY P + I + AF K
Sbjct: 891 MVEEKGYIPCNQTIYWISAAFSK 913
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 138/348 (39%), Gaps = 56/348 (16%)
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG-KSLEHEKATNLIQEM 418
++TL R+Y E A M GV + +N++I+ + L H++ + + +M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
G+ P+ + +I + K G+L A L LR+ + ID V Y T+I GL
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 479 AHAKRLLHELKR----PDNIPRETAI--------MVLARA-------------------- 506
A + L E+ + PD + T I V A+A
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 507 ---RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
+EEA +R +G D+ F +IN + K + +M E+ +P+
Sbjct: 238 YNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVH-------FQMLSLYGARKDFTM 616
++++ K + A ALYSQ+ G V+ F+ L A K F M
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 617 VESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ L+ N N +V G+ + D L+ A I+ +M K++
Sbjct: 355 L------LEDNQVPNVVTYTALVDGLCKAGD-LSSAEFIITQMLEKSV 395
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 211/457 (46%), Gaps = 10/457 (2%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDS-SL 202
SP+V + +++ + RAK A +F + + R P TY+++I + G +
Sbjct: 161 SPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+ + + + D + YS LI KLG AI +F +K + + P Y +++ ++
Sbjct: 219 VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLD 321
K +A L +EM+ G P +Y+ L+ R EA + +M D P D
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP-D 337
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL-FGEAIHLF 380
+ N ++++ G++ VEE +F M P VVSYNT+++ ES+ E F
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M+ V + TY+ +I+ Y K+ EKA L++EM G P Y ++I+ KA
Sbjct: 398 DKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 457
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 496
+ + A LF++L+ + + +Y MI + + G ++ A L +E+K PD
Sbjct: 458 KRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ + +A + EA + R+ G DI+ ++N ++R +E+FE ++
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
G PD +L F FE+A + ++ D+G
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 184/361 (50%), Gaps = 2/361 (0%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+ L D + + + P+ Y +L + + A LF+EM++ G +P YTY+ LI
Sbjct: 252 AIRLFDEMKDNCM-QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
GK G +D + + + M +D ++ D+V +NL+ + K+G + ++F+ +
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 250 PDLIAYNSMINVFGKAKL-FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
P +++YN++I ++K E +M+ + V P +YS L+ Y R +AL
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ EM++ P +I+ G+ E + LF +++ + Y +++ +G
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ EA+ LF M+ +G +V YN +++ K+ +A +L+++M+ NG + +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+++ I++ + + G RA +F+ ++ SG++ D V Y T++ + AG+ A R++ E+
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 489 K 489
K
Sbjct: 611 K 611
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 142/269 (52%), Gaps = 4/269 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAH--GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
+P+V +YN V++ + +K H++ FD+M+ ++P +TYS LI + K ++ +
Sbjct: 370 TPTVVSYNTVIKALFESKA-HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
L L++M++ Y +LI K Y A +F LK + Y MI
Sbjct: 429 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH 488
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
FGK EA L EM++ G PD +Y+ L++ V EA S+ +M + C D
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ + NI+++ + + + +F +++ GI+P+ V+YNTLL + + +F EA + R
Sbjct: 549 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
M+ KG + + +TY+++++ G +++HEK
Sbjct: 609 EMKDKGFEYDAITYSSILDAVG-NVDHEK 636
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 164/343 (47%), Gaps = 37/343 (10%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++AL L + + ++A SP+V+ Y +++ + +A + A+G + +M + GL PD +
Sbjct: 285 EKALDLFEEM-KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 188 LITHFGKHGLLD-------------------------SSLF-----------WLQQMEQD 211
L+ GK G ++ +LF W +M+ D
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 212 NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREA 271
+VS YS LI+ K KA+ + + P AY S+IN GKAK + A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 272 RLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDV 331
L +E+++N + Y+ ++ + + EA+ +F+EM + D+ N ++
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
+ M+ E + L M + G ++ S+N +L + + + AI +F ++ G++ +
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 392 VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
VTYNT++ + + E+A +++EM++ G + +AITYS+I+
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 160/349 (45%), Gaps = 6/349 (1%)
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
++ G+ MV + +F+ + +P +YN+++ + + + ++ M +G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 388 -VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
+ +TY+ +I+ Y K ++ A L EM++N +QP Y+T++ I+ K GK+++A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRETAIMV 502
LF++++ +G Y +I +AG V A K +L + PD + + +
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMIN-LYSRNKKYTNVVEVFEKMREVGYFP 561
L + RVEE T VF + + + +I L+ + V F+KM+ P
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLF 621
+++++ + K EKA L ++ ++G + +++ G K + LF
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 622 EKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIGNHDHA 670
++L N ++ V+ + + +L++A + N M ++ G +A
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++AL LL+ ++EK + P AY ++ + +AK++ A+ LF E+++ Y+
Sbjct: 426 EKALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
+I HFGK G L ++ +M+ D+ Y+ L+ K G ++A S+ +++ +
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
D+ ++N ++N F + + R A + + ++ +G+ PD V+Y+TLL + F EA
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
+ EM D D T + ++D G +
Sbjct: 605 RMMREMKDKGFEYDAITYSSILDAVGNV 632
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 172/358 (48%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
K + PS+ +L + ++ A L D M G P+ Y+T+I K+ L+
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
++L ME+ + D V Y+ LI G ++ A + + I P++I + ++I
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+ F K EAR L +EM V P+ +Y++L+ + + +A +F M C
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D+ T N +I + + VE+G +LF M G+ + +YNTL+ Y ++ A +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
F M GV ++VTYN +++ + + EKA +++++Q + + + ITY+ II +
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE 497
KL A LF+ L GV+ D + Y TMI R GL A +L +K +P E
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 201/425 (47%), Gaps = 4/425 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ + VL + + ++ + L+ +M G++ D Y+++ LI F + L +L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + +V +L+ + + +A+S+ + P+++ YN++IN K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ A + M G+ D V+Y+TL++ ++ R+ +A + +M K ++
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ID + + + E L+ M + + PNV +YN+L+ + G+A ++F LM
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
KG +VVTYNT+I + KS E L EM G+ +A TY+T+I + +AGKL+
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRETAI 500
A +F ++ GV D V Y ++ G + A ++ +L++ D I I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
L R +++EA +FR G D + MI+ R ++ +M+E G+
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 561 PDSNV 565
P +
Sbjct: 497 PSERI 501
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 172/339 (50%), Gaps = 1/339 (0%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
+Q A++L+D ++ + P+V YN V+ + + + + A +F M ++G+ D TY+
Sbjct: 165 FQEAVSLVDSMDGFG-FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
TLI+ G + L+ M + + +++ ++ LI+ K G+ +A +++ +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
S+ P++ YNS+IN F +A+ + M G PD V+Y+TL+ + ++R +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ +F EM D T N +I Y Q + ++F M G+ P++V+YN LL
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ +A+ + +QK + +++TYN +I ++ + ++A L + + G++P+
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
AI Y T+IS + G A L ++++ G + +Y
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 4/354 (1%)
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+ A S+F + S P ++ + ++ V K F L +M + G+ D S++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
L+ + R AL++ +M + T +++ + Q + +E L SM G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
PNVV YNT++ ++ A+ +F M+KKG++ + VTYNT+I+ S A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L+++M I PN I ++ +I + K G L A L++++ V + Y ++I +
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 473 ERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
G + AK + + PD + T I +++RVE+ +F + G V D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+ +I+ Y + K +VF +M + G PD ++L+ + EKA
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 3/294 (1%)
Query: 117 MVSLLSRETDWQRALALL-DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
++S LS W A LL D + K P+V + ++ ++ A L+ EM +
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKI--DPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
R + P+ +TY++LI F HG L + + M D+V Y+ LI K
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+ +F + + D YN++I+ + +A A+ + M D GV PD V+Y+ LL
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+N + +AL + ++ ++ +D+ T NI+I + ++E LF S+ + G++P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ ++Y T++ L EA L R M++ G + Y+ + + SL E
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 31/357 (8%)
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
F +A L EM + P V ++ +L + +F + ++ +M + DL + I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+I + + + L M K+G P++V+ +LL + + F EA+ L M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
NVV YNT+IN K+ + A + M+ GI+ +A+TY+T+IS +G+ AA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
L + + + + + + +I + + G + A+ L E+ R +P L
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL---- 295
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
+N + GC+ + KY +F+ M G FPD
Sbjct: 296 -----------------INGFCIHGCL-----GDAKY-----MFDLMVSKGCFPDVVTYN 328
Query: 568 LVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
++ F K + E L+ ++ +G V + ++ Y + + +F ++
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 194/405 (47%), Gaps = 6/405 (1%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
+L + D+ AL W+ + + Y ++ N+ RAKQ+ + L DEM + G
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
P+ TY+ LI +G+ L+ ++ QM++ D V Y LI++ K G A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ R++A ++PD Y+ +IN GKA A L EM D G P+ V+Y+ ++ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ AL ++ +M +A D T +I+++V G +EE + +F M++ P+
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y L+ ++G++ +A ++ M G++ NV T N++++ + + + +A L+Q M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 420 NNGIQPNAITYSTIISIWEKA-GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
G++P+ TY+ ++S KLD Q + S+G L + + +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLD-MGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 479 AHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQA 519
HA L + D + + + L ++ + EEA V+ A
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVA 740
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 31/266 (11%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
+W R+ G + + +Y T++ G ++ FG L M + G Q N VTYN +I+ YG
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
++ +A N+ +MQ G +P+ +TY T+I I KAG LD A ++Q++++ G+ D
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
Y +I +AG + A +L E+ V++ G
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEM--------------------VDQ-----------G 499
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
++ + M++L+++ + Y N ++++ M+ G+ PD ++V+ G E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 584 ALYSQIHDEGCVFPDEVHFQMLSLYG 609
A+++++ + + + V+ ++ L+G
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D T M+ G+ ++L M + G +PN V+YN L+ YG + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
MQ+ G + + VTY T+I+I+ K+ + A ++ Q MQ G+ P+ TYS II+ KA
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G L A LF ++ G + V Y M+ + +A +A +L +++ PD +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ VL +EEA VF + + D V+G +++L+ + + ++ M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKA 582
G P+ +L+ F ++ + +A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEA 628
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 194/405 (47%), Gaps = 6/405 (1%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
+L + D+ AL W+ + + Y ++ N+ RAKQ+ + L DEM + G
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
P+ TY+ LI +G+ L+ ++ QM++ D V Y LI++ K G A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ R++A ++PD Y+ +IN GKA A L EM D G P+ V+Y+ ++ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ AL ++ +M +A D T +I+++V G +EE + +F M++ P+
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y L+ ++G++ +A ++ M G++ NV T N++++ + + + +A L+Q M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 420 NNGIQPNAITYSTIISIWEKA-GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
G++P+ TY+ ++S KLD Q + S+G L + + +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLD-MGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 479 AHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQA 519
HA L + D + + + L ++ + EEA V+ A
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVA 740
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 31/266 (11%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
+W R+ G + + +Y T++ G ++ FG L M + G Q N VTYN +I+ YG
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
++ +A N+ +MQ G +P+ +TY T+I I KAG LD A ++Q++++ G+ D
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
Y +I +AG + A +L E+ V++ G
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEM--------------------VDQ-----------G 499
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
++ + M++L+++ + Y N ++++ M+ G+ PD ++V+ G E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 584 ALYSQIHDEGCVFPDEVHFQMLSLYG 609
A+++++ + + + V+ ++ L+G
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D T M+ G+ ++L M + G +PN V+YN L+ YG + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
MQ+ G + + VTY T+I+I+ K+ + A ++ Q MQ G+ P+ TYS II+ KA
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G L A LF ++ G + V Y M+ + +A +A +L +++ PD +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ VL +EEA VF + + D V+G +++L+ + + ++ M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKA 582
G P+ +L+ F ++ + +A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEA 628
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 194/405 (47%), Gaps = 6/405 (1%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
+L + D+ AL W+ + + Y ++ N+ RAKQ+ + L DEM + G
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
P+ TY+ LI +G+ L+ ++ QM++ D V Y LI++ K G A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ R++A ++PD Y+ +IN GKA A L EM D G P+ V+Y+ ++ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ AL ++ +M +A D T +I+++V G +EE + +F M++ P+
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y L+ ++G++ +A ++ M G++ NV T N++++ + + + +A L+Q M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 420 NNGIQPNAITYSTIISIWEKA-GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
G++P+ TY+ ++S KLD Q + S+G L + + +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLD-MGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 479 AHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQA 519
HA L + D + + + L ++ + EEA V+ A
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVA 740
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 31/266 (11%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
+W R+ G + + +Y T++ G ++ FG L M + G Q N VTYN +I+ YG
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
++ +A N+ +MQ G +P+ +TY T+I I KAG LD A ++Q++++ G+ D
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
Y +I +AG + A +L E+ V++ G
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEM--------------------VDQ-----------G 499
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
++ + M++L+++ + Y N ++++ M+ G+ PD ++V+ G E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 584 ALYSQIHDEGCVFPDEVHFQMLSLYG 609
A+++++ + + + V+ ++ L+G
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D T M+ G+ ++L M + G +PN V+YN L+ YG + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
MQ+ G + + VTY T+I+I+ K+ + A ++ Q MQ G+ P+ TYS II+ KA
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G L A LF ++ G + V Y M+ + +A +A +L +++ PD +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ VL +EEA VF + + D V+G +++L+ + + ++ M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKA 582
G P+ +L+ F ++ + +A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEA 628
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 2/389 (0%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
L ++ A + L + +K + P+V YN ++ R K LA +F EM ++GL
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGI-EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
P+ +TYS LI F K+ ++ + QM N + V+Y+ +I K+G SKA +
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 240 FARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
L K + +YNS+I+ F K A +EM +NG P+ V++++L+ +
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
+ R AL + EM + LDL +ID + + + ++ LF + ++G+ PNV
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
YN+L+ + AI L++ M G+ ++ TY TMI+ K A++L E+
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
+ GI P+ I + +++ K G+ +A+ + ++++ V + +LY T+I + R G +
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 479 AHAKRLLHELKRPDNIPRETAIMVLARAR 507
A RL E+ + +T +L R
Sbjct: 817 NEAFRLHDEMLEKGIVHDDTVFNLLVSGR 845
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 249/568 (43%), Gaps = 48/568 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSLF 203
P +++ ++ + +A L EMR + G+ + TY+++I F K G ++ ++
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVR 331
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ +M + ++ ++L+ K + KA+ +F R++ +APD + ++ M+ F
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC 391
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K +A M+ + P +V T++ + E AL +F++ ++
Sbjct: 392 KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFM 451
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
CN + ++ + V+ M + GIEPNVV YN ++ + + A +F M
Sbjct: 452 -CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+KG++ N TY+ +I+ + K+ + + A ++I +M + + N + Y+TII+ K G+
Sbjct: 511 LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 444 DRAAMLFQKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRET 498
+A + Q L + + Y ++I + + G A E+ K P+ + +
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I ++ R++ A + + + D+ +G +I+ + + +F ++ E+G
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG--C---------------------- 594
P+ +V +++ F L + + A LY ++ ++G C
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 595 ----------VFPDEV-HFQMLSLYGARKDFTMVESLFEKL---DSNPNINKKELHLVVS 640
+ PDE+ H +++ + F + E++ D PN+ L+ V
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNV---LLYSTVI 807
Query: 641 GIYERADRLNDASRIMNRMNHKAIGNHD 668
+ R LN+A R+ + M K I + D
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDD 835
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/518 (20%), Positives = 232/518 (44%), Gaps = 45/518 (8%)
Query: 98 QELHAVMSLYNQRQ--------LSIRFMVSLLSRETDWQRALALLDWINEKAL-YSPSVF 148
EL + L+N+ + + MV + + ++A+ ++ K++ +PS
Sbjct: 359 NELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF--YMRMKSVRIAPSSV 416
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
+ +++ L+A+ A +F++ + +A + + + F K G +D++ +L+ M
Sbjct: 417 LVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
EQ + ++V Y+N++ ++ + A SIF+ + + P+ Y+ +I+ F K K
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNI 327
+ A ++ +M + + V Y+T++ + +A + + + + + T+ N
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+ID + ++ + + M + G PNVV++ +L+ + +S A+ + M+
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
++ ++ Y +I+ + K + + A L E+ G+ PN Y+++IS + GK+D A
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
L++K+ + G+ D Y TMI + G + A L EL +P E MVL
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL---- 771
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
+N S+ ++ ++ E+M++ P+ + +
Sbjct: 772 ---------------------------VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 568 LVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
V+ + +A L+ ++ ++G V D V F +L
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV-FNLL 841
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 202/464 (43%), Gaps = 10/464 (2%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
A+N +L +R K+ A F M R + P + +++ + L+D + +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
V+GD V L+ S + +A+ IF R+ + PD + ++ + K
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 269 REARLLLQEMRDN-GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
A LL+EMR GV +Y++++ +V EA+ V EM P+ +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+++ Y + + + + LF M + G+ P+ V ++ ++ + ++ +AI + M+
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+ + V +TMI K+ E A + + + I + + I ++ K GK+D A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAAT 469
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVL 503
+ + G++ + V Y M++A+ R + A+ + E+ P+N I
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 504 ARARRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKM-REVGYFP 561
+ + + A V Q A+ E N++ ++ +IN + + + E+ + + +E Y
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEV-IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+++ F K+ + + A Y ++ + G P+ V F L
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-PNVVTFTSL 631
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/381 (18%), Positives = 167/381 (43%), Gaps = 14/381 (3%)
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+++ LL Y+ N+R A+ F M D K + N ++ + ++++E ++ M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
+G+ + V+ L+R EA+ +FR + +G + + + ++ + K+ +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 409 EKATNLIQEMQNN-GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
A +L++EM+ G+ + TY+++I + K G ++ A + ++ G+ + + +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 468 MIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
++ Y + + A L + ++ PD + + + +E+A + + +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE--VGYFPDSNVIALVLNAFGKLREFEK 581
+ MI + + +E+F E + + N I L+ GK+ +
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKV---DA 467
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGAR-KDFTMVESLF-EKLDSNPNINKKELHLVV 639
A + + +G + P+ V + + L R K+ + S+F E L+ N +++
Sbjct: 468 ATSFLKMMEQKG-IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 640 SGIYERADRLNDASRIMNRMN 660
G ++ D N A ++N+MN
Sbjct: 527 DGFFKNKDEQN-AWDVINQMN 546
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 213/423 (50%), Gaps = 9/423 (2%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
S ++ N+++ ++ Q +LA +M + G PD T+++LI F ++ ++
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ QM + + D+V+Y+ +I+ K G + A+S+F +++ I PD++ Y S++N
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ +R+A LL+ M + PD ++++ L+ +V +F++A +++EM ++
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T +I+ + V+E ++F+ M G P+VV+Y +L+ + + + +A+ +F M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+KG+ N +TY T+I +G+ + A + M + G+ PN TY+ ++ GK+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 444 DRAAMLF---QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPR 496
+A M+F QK GV + Y ++ G + A + ++++ + I
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMIN-LYSRNKKYTNVVEVFEKMR 555
I + +A +V+ A +F + G ++ + MI+ L+ K+ V +F KM+
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV-LFRKMK 522
Query: 556 EVG 558
E G
Sbjct: 523 EDG 525
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 187/383 (48%), Gaps = 7/383 (1%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P + + ++ + A + ++M + G+ PD Y+T+I K+G ++ +L
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
QME + D+V+Y++L+ G + A S+ + I PD+I +N++I+ F
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K F +A L EM + P+ +Y++L+ + EA +F M C D+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+I+ + + V++ ++F+ M + G+ N ++Y TL++ +G+ A +F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN---NGIQPNAITYSTIISIWEK 439
M +GV N+ TYN +++ + + +KA + ++MQ +G+ PN TY+ ++
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIP 495
GKL++A M+F+ +R + I + Y +I +AG V +A L L +P+ +
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 496 RETAIMVLARARRVEEATWVFRQ 518
T I L R EA +FR+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRK 520
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 39/369 (10%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+ A+++++ + E + P V Y ++ ++ + + A LFD+M G+ PD Y++
Sbjct: 159 EEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
L+ G + L+ M + + D++ ++ LI+ K G + A ++ + S
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
IAP++ Y S+IN F EAR + M G PD V+Y++L+ + ++ +A+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
+F EM+ + T +I +GQ+ +F M G+ PN+ +YN LL
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 368 GESELFGEAIHLFRLMQKK---GVQQNVVTYNTMIN--IYGKSLEH-------------- 408
+ +A+ +F MQK+ GV N+ TYN +++ Y LE
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 409 -------------------EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
+ A NL + + G++PN +TY+T+IS + G A +L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 450 FQKLRSSGV 458
F+K++ GV
Sbjct: 518 FRKMKEDGV 526
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 187/414 (45%), Gaps = 7/414 (1%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME 209
Y +LRN L + Q++ A LF M + P ++ L+ K D + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFR 269
VS DL + L+ + A S ++ PD++ + S+IN F
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
EA ++ +M + G+ PD V Y+T++ N ALS+F +M + D+ ++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ + D L M K I+P+V+++N L+ + + F +A L+ M + +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
N+ TY ++IN + ++A + M+ G P+ + Y+++I+ + K K+D A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL-HELKR--PDNIPRETAIM-VLAR 505
F ++ G+ + + Y T+I + + G A+ + H + R P NI ++ L
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 506 ARRVEEATWVF---RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+V++A +F ++ G +I + +++ N K + VFE MR+
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 162/314 (51%), Gaps = 12/314 (3%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+V+ L W+ A +LL + ++ + P V +N ++ ++ ++ A L++EM +
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKI-KPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSS--LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+AP+ +TY++LI F G +D + +F+L ME D+V Y++LI K
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYL--METKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
A+ IF + + + I Y ++I FG+ A+ + M GV P+ +Y+ LL
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 295 AIYVDNERFVEALSVFSEMN----DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
N + +AL +F +M D P ++ T N+++ +E+ +F MRK
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAP-NIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN-IYGKSLEHE 409
++ +++Y +++ ++ A++LF + KGV+ NVVTY TMI+ ++ + L+HE
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 410 KATNLIQEMQNNGI 423
A L ++M+ +G+
Sbjct: 514 -AHVLFRKMKEDGV 526
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 151/336 (44%), Gaps = 7/336 (2%)
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
+F EAL +F+ M +++ + +++V ++ + L ++ MG+ ++ + N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L+ + +S A M K G + ++VT+ ++IN + E+A +++ +M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
GI+P+ + Y+TII K G ++ A LF ++ + G++ D V+Y +++ +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 482 KRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
LL + +PD I I + + +A ++ + +I + +IN
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
+ ++F M G FPD ++N F K ++ + A ++ ++ +G
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 598 DEVHFQMLSLYGARKDFTMVESLFEKLDSN---PNI 630
+ ++ +G + + +F + S PNI
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 249/575 (43%), Gaps = 43/575 (7%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL + + K ++ PS N++L +++RA ++ FD + +G++PD Y ++T I
Sbjct: 210 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAI 267
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
F K G ++ ++ +ME+ V+ ++V ++ +I+ G Y +A ++ +
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P LI Y+ ++ +AK +A +L+EM G P+ + Y+ L+ +++ +A+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL------ 363
M L +T N +I Y + + +RL M +G N S+ ++
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 364 -------LRVYGESEL----------------------FGEAIHLFRLMQKKGVQQNVVT 394
LR GE L +A+ L+ KG + T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
N +++ ++ + ++A + +E+ G + ++Y+T+IS KLD A M ++
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVE 510
G++ D Y +I V A + + KR PD I +A R E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
E F + + + V+ +I Y R+ + + +E+ E M+ G P+S ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 571 NAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPN 629
+ E+A L+ ++ EG + P+ H+ ++ YG VE L ++ S
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 630 INKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
K + V+ G Y R + +ASR++N M K I
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 178/402 (44%), Gaps = 36/402 (8%)
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
+A+ + D + K L S + YN +++ + Q A L EM G ++ +++++
Sbjct: 383 KAIEIKDLMVSKGL-SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 189 ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF-------- 240
I H + DS+L ++ +M N+S L + LI K G +SKA+ ++
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 241 ---------------------------ARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
+ D ++YN++I+ K EA +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
L EM G+ PD +YS L+ + + EA+ + + D+ T ++MID
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ EEG F M ++PN V YN L+R Y S A+ L M+ KG+ N
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
TY ++I E+A L +EM+ G++PN Y+ +I + K G++ + L +++
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
S V +++ Y MI Y R G V A RLL+E++ +P
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ YN ++R R+ + +A L ++M+ +G++P+ TY++LI ++ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++M + + ++ Y+ LI+ KLG K + + + ++ P+ I Y MI + +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
EA LL EMR+ G+ PD+++Y + Y+ +EA E N A
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYA 814
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 249/575 (43%), Gaps = 43/575 (7%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL + + K ++ PS N++L +++RA ++ FD + +G++PD Y ++T I
Sbjct: 210 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAI 267
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
F K G ++ ++ +ME+ V+ ++V ++ +I+ G Y +A ++ +
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P LI Y+ ++ +AK +A +L+EM G P+ + Y+ L+ +++ +A+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL------ 363
M L +T N +I Y + + +RL M +G N S+ ++
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 364 -------LRVYGESEL----------------------FGEAIHLFRLMQKKGVQQNVVT 394
LR GE L +A+ L+ KG + T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
N +++ ++ + ++A + +E+ G + ++Y+T+IS KLD A M ++
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVE 510
G++ D Y +I V A + + KR PD I +A R E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
E F + + + V+ +I Y R+ + + +E+ E M+ G P+S ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 571 NAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPN 629
+ E+A L+ ++ EG + P+ H+ ++ YG VE L ++ S
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 630 INKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
K + V+ G Y R + +ASR++N M K I
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 178/402 (44%), Gaps = 36/402 (8%)
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
+A+ + D + K L S + YN +++ + Q A L EM G ++ +++++
Sbjct: 383 KAIEIKDLMVSKGL-SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 189 ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF-------- 240
I H + DS+L ++ +M N+S L + LI K G +SKA+ ++
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 241 ---------------------------ARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
+ D ++YN++I+ K EA +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
L EM G+ PD +YS L+ + + EA+ + + D+ T ++MID
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ EEG F M ++PN V YN L+R Y S A+ L M+ KG+ N
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
TY ++I E+A L +EM+ G++PN Y+ +I + K G++ + L +++
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
S V +++ Y MI Y R G V A RLL+E++ +P
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ YN ++R R+ + +A L ++M+ +G++P+ TY++LI ++ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++M + + ++ Y+ LI+ KLG K + + + ++ P+ I Y MI + +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
EA LL EMR+ G+ PD+++Y + Y+ +EA E N A
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYA 814
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 40/465 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+VF+YN ++ ++ + + AH ++ MR RG+ PD Y+++ + F K ++L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L M ++V Y ++ + ++ +F ++ AS ++ L +N ++ V K
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+E LL ++ GV P+ +Y+ F++ L E++ A
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNL----------FIQGLCQRGELDGAV------- 271
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
R+ + + G +P+V++YN L+ ++ F EA M
Sbjct: 272 ------------------RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+G++ + TYNT+I Y K + A ++ + NG P+ TY ++I G+ +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV-- 502
RA LF + G++ + +LY T+I G++ A +L +E+ IP +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 503 --LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
L + V +A + + + G DI F +I+ YS K N +E+ + M + G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
PD +LN K +FE Y + ++GC P+ F +L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA-PNLFTFNIL 537
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 207/464 (44%), Gaps = 11/464 (2%)
Query: 169 LFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV--LYSNLIE 225
+F+ MR+ G TY ++I G +G ++ L M ++NV ++ +Y ++
Sbjct: 26 MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYVGAMK 84
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
+ G +A+++F R+ P + +YN++++V + F +A + MRD G+ P
Sbjct: 85 NYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITP 144
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D S++ + + R AL + + M+ C +++ ++ + + + EG LF
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
M G+ + ++N LLRV + E L + K+GV N+ TYN I +
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
E + A ++ + G +P+ ITY+ +I K K A + K+ + G++ D Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 466 QTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFA 521
T+I Y + G+V A+R++ + PD + I L A +F +A
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
G ++ ++ +I S ++ +M E G P+ +++N K+
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLD 625
AD L + +G FPD F +L ++G M E+ E LD
Sbjct: 445 ADGLVKVMISKG-YFPDIFTFNIL-IHGYSTQLKM-ENALEILD 485
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 198/462 (42%), Gaps = 6/462 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ +L ++ D + LLD + ++ + P++F YN+ ++ + + + A + + ++
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G PD TY+ LI K+ + +L +M + + D Y+ LI K G A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I + PD Y S+I+ A L E G+ P+ + Y+TL+
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ +EA + +EM++ ++ T NI+++ ++ V + D L M G P+
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+ ++N L+ Y A+ + +M GV +V TYN+++N K+ + E +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
M G PN T++ ++ + KLD A L +++++ V D V + T+I + + G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 477 LVAHAKRLLHELKRPDNIPRETA-----IMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
+ A L +++ + T I V A +F++ D +
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
M++ + + + +M E G+ P + V+N
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 195/432 (45%), Gaps = 5/432 (1%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
+N +LR + + L D++ +RG+ P+ +TY+ I + G LD ++ + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ D++ Y+NLI K + +A ++ + PD YN++I + K +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+ A ++ + NG PD +Y +L+ AL++F+E ++ N +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
I M+ E +L M + G+ P V ++N L+ + +A L ++M KG
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
++ T+N +I+ Y L+ E A ++ M +NG+ P+ TY+++++ K K +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLA 504
++ + G + + ++ + R + A LL E+K PD + T I
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 505 RARRVEEATWVFRQAFAAGEV-NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
+ ++ A +FR+ A +V + + +I+ ++ T ++F++M + PD
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 564 NVIALVLNAFGK 575
L+++ F K
Sbjct: 638 YTYRLMVDGFCK 649
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 187/445 (42%), Gaps = 41/445 (9%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L + + A+ ++ + E+ P V YN ++ + + ++ A +M GL P
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
D YTY+TLI + K G++ + + + D Y +LI+ G+ ++A+++F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
I P++I YN++I + EA L EM + G+ P+ +++ L+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
+A + M D+ T NI+I Y +E + M G++P+V +Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
N+LL ++ F + + ++ M +KG N+ T+N ++ + + ++A L++EM+N
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 421 NGIQPNAITYST------------------------------------IISIWEKAGKLD 444
+ P+A+T+ T II + + +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA----I 500
A LFQ++ + D Y+ M+ + + G V + L E+ IP T I
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 501 MVLARARRVEEATWVFRQAFAAGEV 525
L RV EA + + G V
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 9/352 (2%)
Query: 102 AVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAK 161
AV + + Q + R ++ L E + RALAL + K + P+V YN +++ +
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQG 405
Query: 162 QWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYS 221
A L +EM ++GL P+ T++ L+ K G + + ++ M D+ ++
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 222 NLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN 281
LI A+ I + + + PD+ YNS++N K F + + M +
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 282 GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
G P+ +++ LL + EAL + EM + D T +ID + + ++
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 342 DRLFWSMRKM-GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN 400
LF M + + + +YN ++ + E A LF+ M + + + TY M++
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 401 IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS-------IWEKAGKLDR 445
+ K+ + EM NG P+ T +I+ ++E AG + R
Sbjct: 646 GFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 135/330 (40%), Gaps = 39/330 (11%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ LS + A L + ++EK L P V +N+++ + + A GL M +
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G PD +T++ LI + ++++L L M + V D+ Y++L+ K +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + + AP+L +N ++ + + EA LL+EM++ V PD V++ TL+
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 297 YVDN------------------------------ERFVEALSV------FSEMNDAKCPL 320
+ N F E L+V F EM D
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D T +M+D + + V G + M + G P++ + ++ + EA +
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
M +KG+ V NT+ ++ K + K
Sbjct: 696 HRMVQKGLVPEAV--NTICDVDKKEVAAPK 723
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 164/321 (51%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
+L + ++ AL W+ + + Y ++ N+ RAKQ+ + L DEM + G
Sbjct: 332 VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCK 391
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
P+ TY+ LI +G+ L ++ QM++ D V Y LI++ K G A+ +
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ R++ + ++PD Y+ +IN GKA A L EM G P+ V+++ ++A++
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ AL ++ +M +A D T +I+++V G +EE + +F M++ P+
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPV 571
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y L+ ++G++ +A ++ M + G++ NV T N++++ + + +A NL+Q M
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 420 NNGIQPNAITYSTIISIWEKA 440
G+ P+ TY+ ++S A
Sbjct: 632 ALGLHPSLQTYTLLLSCCTDA 652
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 228 RKLGDYSKAISIFARLK-ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+++ +Y+ A+ F LK D Y +M+ G+AK F E LL EM +G P+
Sbjct: 334 KQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPN 393
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
TV+Y+ L+ Y EA++VF++M +A C D T +ID++ + ++ ++
Sbjct: 394 TVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M++ G+ P+ +Y+ ++ G++ A LF M +G N+VT+N MI ++ K+
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR 513
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+E A L ++MQN G QP+ +TYS ++ + G L+ A +F +++ D+ +Y
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYG 573
Query: 467 TMIVAYERAGLVAHA----KRLLHELKRPDNIPRETAIM-VLARARRVEEATWVFRQAFA 521
++ + +AG V A + +L RP N+P +++ R R+ EA + + A
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRP-NVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 522 AG 523
G
Sbjct: 633 LG 634
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 145/296 (48%)
Query: 174 RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDY 233
RQ G D +TY+T++ + G+ L +M +D + V Y+ LI +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
+A+++F +++ + PD + Y ++I++ KA A + Q M++ G+ PDT +YS +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ A +F EM C +L T NIMI ++ + E +L+ M+ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+P+ V+Y+ ++ V G EA +F MQ+K + Y +++++GK+ +KA
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
Q M G++PN T ++++S + + ++ A L Q + + G+ Y ++
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D T M+ G+ E ++L M + G +PN V+YN L+ YG + EA+++F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
MQ+ G + + VTY T+I+I+ K+ + A ++ Q MQ G+ P+ TYS II+ KA
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G L A LF ++ G + V + MI + +A A +L +++ +PD +
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ VL +EEA VF + V D V+G +++L+ + + ++ M +
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKA 582
G P+ +L+ F ++ +A
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEA 623
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
+W R+ G + + +Y T++ G ++ FGE L M + G + N VTYN +I+ YG
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYG 405
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
++ ++A N+ +MQ G +P+ +TY T+I I KAG LD A ++Q+++ +G+ D
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465
Query: 464 LYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQA 519
Y +I +AG + A RL E+ P+ + I + A+AR E A ++R
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
Query: 520 FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREF 579
AG D + ++ + VF +M+ + PD V L+++ +GK
Sbjct: 526 QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV 585
Query: 580 EKADALYSQIHDEG 593
+KA Y + G
Sbjct: 586 DKAWQWYQAMLQAG 599
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRV 509
R G + D Y TM+ RA +LL E+ R P+ + I RA +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
+EA VF Q AG D + +I+++++ ++++++M+E G PD+ +++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 570 LNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNP 628
+N GK A L+ ++ +GC P+ V F M++L+ +++ L+ + +
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCT-PNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 629 NINKKELHLVVSGIYERADRLNDASRIMNRMNHK 662
K + +V + L +A + M K
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 238/521 (45%), Gaps = 42/521 (8%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L R + +A++LL + +L P VF+YN V+R K+ A L +EM+ G +
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
T+ LI F K G +D ++ +L++M+ + DLV+Y++LI G+ + ++F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
+ +P I YN++I F K +EA + + M + GV P+ +Y+ L+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMID-------VYGQLHMVE-------------- 339
+ EAL + + M + + T NI+I+ V + +VE
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 340 --------------EGDRLFWSMRKMG--IEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
E +L + M K +P+V+SYN L+ + +A+ ++ L+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+K + VT N ++N K+ + KA L +++ ++ I N+ TY+ +I + K G L
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+ A L K+R S +Q Y ++ + + G + A RL E++R +N P + ++
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 504 A----RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
+A ++ A + AG D+ + +IN + + + F+KM + G+
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV 600
PD+++ VL E +K L ++ D+ V E+
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 191/428 (44%), Gaps = 7/428 (1%)
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
F+ + +E D + V S L+E ++ A + A + A ++ +N ++
Sbjct: 94 FYRKMLETDTFI-NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGL 152
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ +A LL+EMR N + PD SY+T++ + + + +AL + +EM + C L
Sbjct: 153 CRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSL 212
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T I+ID + + ++E M+ MG+E ++V Y +L+R + + LF
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+ ++G +TYNT+I + K + ++A+ + + M G++PN TY+ +I GK
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRET 498
A L + + + V Y +I + GLVA A ++ +K RPDNI
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISV--FGCMINLYSRNKKYTNVVEVFEKMRE 556
+ L ++EA+ + D V + +I+ + + +++++ + E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM 616
D ++LN+ K + KA L+ QI D V + + M+ + +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 617 VESLFEKL 624
+ L K+
Sbjct: 513 AKGLLCKM 520
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 218/480 (45%), Gaps = 16/480 (3%)
Query: 153 VLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDN 212
+L ++ ++ A G+ M +RG A + Y ++ L+ ++ ++ L++M +++
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 213 VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREAR 272
+ D+ Y+ +I + + KA+ + +K S + L+ + +I+ F KA EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 273 LLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM---NDAKCPLDLTTCNIMI 329
L+EM+ G+ D V Y++L+ + D ++F E+ D+ C + T N +I
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLI 289
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ +L ++E +F M + G+ PNV +Y L+ EA+ L LM +K +
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA-M 448
N VTYN +IN K A +++ M+ +P+ ITY+ ++ G LD A+ +
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 449 LFQKLR-SSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRETAIMVL 503
L+ L+ SS D + Y +I + + A L+ +L D + +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
+A V +A +++Q + V + + MI+ + + + KMR P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARK--DFTMVESLF 621
+L++ K ++A L+ ++ + FPD V F ++ + G+ K D ESL
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIM-IDGSLKAGDIKSAESLL 587
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 166/416 (39%), Gaps = 73/416 (17%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
+ R AL D + E+ SP YN ++R + Q A +F+ M +RG+ P+ YTY
Sbjct: 262 ELDRGKALFDEVLERG-DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+ LI G +L L M + + + V Y+ +I K G + A+ I +K
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 246 SSIAPDLIAYNSMIN-VFGKAKLFREARLLLQEMRDNGVC-PDTVSYSTLLAIYVDNERF 303
PD I YN ++ + K L ++LL ++D+ PD +SY+ L+ R
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 304 VEALSVFS-----------------------------------EMNDAKCPLDLTTCNIM 328
+AL ++ +++D+K + T M
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK-- 386
ID + + M+ L MR ++P+V YN LL + +A LF MQ+
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 387 ---------------------------------GVQQNVVTYNTMINIYGKSLEHEKATN 413
G+ ++ TY+ +IN + K ++A +
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+M ++G +P+A +++ G+ D+ L +KL + +D+ L T++
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
A S + +M + ++ + + +++ Y Q+ + M K G NV ++N LL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 366 VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
+ G+A+ L R M++ + +V +YNT+I + + E EKA L EM+ +G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
+ +T+ +I + KAGK+D A ++++ G++ D V+Y ++I + G + K L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 486 HE-LKRPDN---IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRN 541
E L+R D+ I T I + +++EA+ +F G ++ + +I+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 542 KKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
K +++ M E P++ +++N K
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 185/360 (51%), Gaps = 2/360 (0%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W+ A+ + + + E+ Y P+V Y ++ + + KQ AH LF EM G + Y+
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
L++ + + G D++ L++M+ N D+ YS LI+ ++ + K + + ++
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PDTVSYSTLLAIYVDNERFV 304
I P+ I YN++I+ +GKAK+F E L +M C PD+ + ++ L + N +
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+ + + + ++ T NI++D YG+ ++ + M+K +V+YN ++
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
+G + + +LFRLMQ + + + VT +++ YG++ + +K +++ ++N+ I+
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
+ + ++ ++ + + K + + + G + D++ Y+TM+ AY +G+ H K L
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 169/348 (48%), Gaps = 7/348 (2%)
Query: 233 YSKAISIFARLKASS-IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+ AI +F L+ P++ Y +I + GK K +A L QEM + G + Y+
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 292 TLLAIYVDNERFVEALSVFSEMNDA-KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
L++ Y + RF A ++ M + C D+ T +I+I + Q+ ++ L MR+
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 351 MGIEPNVVSYNTLLRVYGESELFGE-AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
GI PN ++YNTL+ YG++++F E L +++ + + + T N+ + +G + + E
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
N ++ Q++GI+PN T++ ++ + K+G + + + + ++ V Y +I
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 470 VAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
A+ RAG + + L ++ P + + + RA + ++ V R +
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
D+ F C+++ Y R +K+ + V E M + G+ PD ++ A+
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 149/325 (45%), Gaps = 34/325 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+VS SR + A LL+ + P V Y++++++ L+ + L +MR++
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ P+ TY+TLI +GK + +ME S LI++ LG+
Sbjct: 251 GIRPNTITYNTLIDAYGKAKM-------FVEME-----------STLIQM---LGE---- 285
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
PD NS + FG ++ + +G+ P+ +++ LL
Sbjct: 286 ---------DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS 336
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
Y + + + +V M + T N++ID +G+ +++ + LF M+ I P+
Sbjct: 337 YGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V+ +L+R YG + + + R ++ ++ ++V +N +++ YG+ + + +++
Sbjct: 397 CVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLE 456
Query: 417 EMQNNGIQPNAITYSTIISIWEKAG 441
M+ G +P+ ITY T++ + +G
Sbjct: 457 LMEKKGFKPDKITYRTMVKAYRISG 481
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 7/258 (2%)
Query: 376 AIHLFRLMQKK-GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
AI +F L++++ + NV Y +I + GK + EKA L QEM N G N Y+ ++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 435 SIWEKAGKLDRAAMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR--- 490
S + ++G+ D A L ++++SS Q D Y +I ++ + + LL +++R
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 491 -PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN-DISVFGCMINLYSRNKKYTNVV 548
P+ I T I +A+ E Q + D + + N + +
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 549 EVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLY 608
+EK + G P+ ++L+++GK ++K A+ + + + ++ +
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 609 GARKDFTMVESLFEKLDS 626
G D +E LF + S
Sbjct: 373 GRAGDLKQMEYLFRLMQS 390
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 543 KYTNVVEVFEKMRE-VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVH 601
++ + ++VFE +RE + Y P+ + ++ GK ++ EKA L+ ++ +EGCV EV+
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 602 FQMLSLYGARKDFTMVESLFEKLDSNPN 629
++S Y F +L E++ S+ N
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHN 216
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 221/465 (47%), Gaps = 13/465 (2%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY 183
E + AL +L+ + + +P YN +L+ + + + L +M++ GL P+R
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY+ L+ + K G L + ++ M+Q NV DL Y+ LI G + + + +
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
K+ + PD++ YN++I+ + L EAR L+++M ++GV + V+++ L E+
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 304 VEALSVFSEMNDAK--CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
E+ D P D+ T + +I Y ++ + + M + GI+ N ++ N
Sbjct: 397 EAVTRKVKELVDMHGFSP-DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
T+L + EA +L K+G + VTY T+I + + + EKA + EM+
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
I P T++++I GK + A F +L SG+ D + ++I+ Y + G V A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 482 KRLLHE-LK---RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
+E +K +PDN + L + E+A F EV+ ++ + MI+
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISA 634
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPD----SNVIALVLNAFGKLRE 578
+ ++KK ++ +M E G PD ++ I+L++ GKL E
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED-GKLSE 678
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 210/453 (46%), Gaps = 9/453 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGL---LDSS 201
PS +++ L L + H+A +F +M + L P+ T +TL+ ++ + S+
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS-SIAPDLIAYNSMIN 260
M + VS ++ ++ L+ G A+ + R+ + + PD + YN+++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
K + + LL +M+ NG+ P+ V+Y+ L+ Y EA + M
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
DL T NI+I+ + EG L +M+ + ++P+VV+YNTL+ E L EA L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN-NGIQPNAITYSTIISIWEK 439
M+ GV+ N VT+N + K + E T ++E+ + +G P+ +TY T+I + K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIP 495
G L A + +++ G++++ + T++ A + + A LL+ + D +
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 496 RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
T IM R +VE+A ++ + +S F +I + K +E F+++
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
E G PD + ++ + K EKA Y++
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 213/458 (46%), Gaps = 11/458 (2%)
Query: 145 PSVFAYNVVLRNVLR---AKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
P++ N +L ++R + A +FD+M + G++ + T++ L+ + G L+ +
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 202 LFWLQQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN 260
L L++M + V+ D V Y+ +++ K G S + +K + + P+ + YN+++
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
+ K +EA +++ M+ V PD +Y+ L+ + E L + M K
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI--H 378
D+ T N +ID +L + E +L M G++ N V++N L+ + E EA+
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRK 402
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+ L+ G ++VTY+T+I Y K + A +++EM GI+ N IT +TI+
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR-- 496
K KLD A L G +D+V Y T+I+ + R V A + E+K+ P
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 497 --ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
+ I L + E A F + +G + D S F +I Y + + E + +
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
+ + PD+ ++LN K EKA ++ + +E
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 159/379 (41%), Gaps = 70/379 (18%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P + YN+++ + A L D M+ L PD TY+TLI + GL +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 205 LQQMEQDNV------------------------------------SGDLVLYSNLIELSR 228
++QME D V S D+V Y LI+
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K+GD S A+ + + I + I N++++ K + EA LL G D V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+Y TL+ + E+ +AL ++ EM K ++T N +I E F +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 349 RKMGIEPNVVSYNTLL-------RVYGESELFGEAI-HLFRL-----------MQKKGVQ 389
+ G+ P+ ++N+++ RV E + E+I H F+ + K+G+
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 390 Q---------------NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+ + VTYNTMI+ + K + ++A +L+ EM+ G++P+ TY++ I
Sbjct: 608 EKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 435 SIWEKAGKLDRAAMLFQKL 453
S+ + GKL L +K
Sbjct: 668 SLLMEDGKLSETDELLKKF 686
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 14/318 (4%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
D AL ++ + +K + ++ N +L + + ++ AH L + +RG D TY
Sbjct: 431 DLSGALEMMREMGQKGIKMNTI-TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
TLI F + ++ +L +M++ ++ + +++LI G A+ F L
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
S + PD +NS+I + K +A E + PD + + LL +
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
AL+ F+ + + + +D T N MI + + ++E L M + G+EP+ +YN+ +
Sbjct: 610 ALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 366 VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
+ E E L + K + +M + L+ E N +
Sbjct: 669 LLMEDGKLSETDELLKKFSGK--------FGSM----KRDLQVETEKNPATSESKEELNT 716
Query: 426 NAITYSTIISIWEKAGKL 443
AI YS +I G+L
Sbjct: 717 EAIAYSDVIDELCSRGRL 734
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 204/443 (46%), Gaps = 39/443 (8%)
Query: 98 QELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNV 157
+ V+S+YN +++ L +E D++ A L+ + EK + SP+V +Y+ ++ +
Sbjct: 240 ERFEPVVSVYNA-------LINGLCKEHDYKGAFELMREMVEKGI-SPNVISYSTLINVL 291
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITH-FGKHGLLDSSLFWLQQMEQDNVSGD 216
+ Q LA +M +RG P+ YT S+L+ F + D+ W Q + + +
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 217 LVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ 276
+V Y+ L++ G+ KA+S+F+ ++ +P++ Y S+IN F K A +
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
+M +G CP+ V Y+ ++ + +F EA S+ M+ C + T N I
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Query: 337 MVEEGDRLFWSMRKMG-IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
++ +++F M + PN+V+YN LL ++ EA L R + +GV+ + TY
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
NT+++ + A L+ +M +G P+ IT + II + K GK +RAA +
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD---- 587
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWV 515
LV+ +R RPD I I L R+ E+ +
Sbjct: 588 ---------------------LVSCGRRKW----RPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 516 FRQAFAAGEVNDISVFGCMINLY 538
+ +AG V I+ + +IN +
Sbjct: 623 LERMISAGIVPSIATWSVLINCF 645
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 216/463 (46%), Gaps = 16/463 (3%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+RA+ + I E PSV YN VL +L + + + ++ +M++ G P+ +TY+
Sbjct: 128 ERAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
L+ K+ +D + L +M D V Y+ +I ++G + R A
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAER 241
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
P + YN++IN K ++ A L++EM + G+ P+ +SYSTL+ + ++ + A
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL-FWS--MRKMGIEPNVVSYNTLL 364
S ++M C ++ T + ++ G D L W+ +R G++PNVV+YNTL+
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVK--GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
+ + +A+ +F M++ G N+ TY ++IN + K + A + +M +G
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
PN + Y+ ++ + K A L + + + I AG + A+++
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 485 LHELKR----PDNIPRETAIM-VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYS 539
++++ P NI ++ LA+A R+EEA + R+ F G S + +++
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 540 RNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+++ KM G PD + +++ A+ K + E+A
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 179/412 (43%), Gaps = 37/412 (8%)
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
T+ +I G +DS + LQQM+ L+ ++I + R++G +A+ +F R+
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
K P + YN +++ + ++ ++M+ +G P+ +Y+ LL N +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
A + EM++ C D + +I ++ +V+EG L EP V YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNAL 252
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
+ + + A L R M +KG+ NV++Y+T+IN+ S + E A + + +M G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 424 QPNAITYSTII-SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
PN T S+++ + + D + Q +R G+Q + V Y T++ G +H
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV-----QGFCSHGN 367
Query: 483 RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
+ +A VF G +I +G +IN +++
Sbjct: 368 --------------------------IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC 594
V ++ KM G P+ V ++ A + +F++A++L + E C
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 166/376 (44%), Gaps = 47/376 (12%)
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL-RVYGESELFGEAIHL-FRLMQK 385
+I VY Q+ + E +F+ +++ G +P+V YN +L + GE+ + + I++ +R M++
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRI--QMIYMVYRDMKR 174
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G + NV TYN ++ K+ + + A L+ EM N G P+A++Y+T+IS + G +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
L ++ V + L + ++ G + ++ + P+ I T I VL
Sbjct: 235 GRELAERFEPV-VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 506 ARRVEEA-------------------TWVFRQAFAAGEVND--------ISVFGCMINLY 538
+ ++E A + + + F G D I FG N+
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 539 SRNK------KYTNVVE---VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
+ N + N+V+ VF M E+G P+ ++N F K + A +++++
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 590 HDEGCVFPDEVHFQMLSLYGARKDFTMVESLFE---KLDSNPNINKKELHLVVSGIYERA 646
GC V+ M+ F ESL E K + P++ + + G+ + A
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV--PTFNAFIKGLCD-A 470
Query: 647 DRLNDASRIMNRMNHK 662
RL+ A ++ +M +
Sbjct: 471 GRLDWAEKVFRQMEQQ 486
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 134 LDW-------INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
LDW + ++ P++ YN +L + +A + A+GL E+ RG+ TY+
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
TL+ GL +L + +M D S D + + +I K G +A + +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 247 --SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
PD+I+Y ++I ++ + +LL+ M G+ P ++S L+ ++
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 182/383 (47%), Gaps = 39/383 (10%)
Query: 123 RETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDR 182
+E WQ AL + + + ++ Y P Y + + + KQ A LF+ M GL P
Sbjct: 120 KENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 179
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
Y++LI+ +GK LLD + L+ M+
Sbjct: 180 DVYTSLISVYGKSELLDKAFSTLEYMKS-------------------------------- 207
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
S PD+ + +I+ K F + ++ EM GV TV+Y+T++ Y
Sbjct: 208 --VSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 303 FVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
F E SV ++M D D+ T N +I YG + + + + + MG++P++ ++N
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L+ +G++ ++ + + M+K+ VTYN +I +GK+ EK ++ ++M+
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
G++PN+ITY ++++ + KAG + + + +++ +S V +D + +I AY +AG +A
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445
Query: 482 KRLLHELK----RPDNIPRETAI 500
K L +++ +PD I T I
Sbjct: 446 KELYIQMEERKCKPDKITFATMI 468
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 155/348 (44%), Gaps = 46/348 (13%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S+ + +A + L+++ + P VF + V++ + ++ L + EM
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS-- 234
G+ TY+T+I +GK G+ + L M +D GD + ++ L+ +G Y
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIED---GDSL--PDVCTLNSIIGSYGNG 299
Query: 235 ----KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
K S ++R + + PD+ +N +I FGKA ++++ ++ M TV+Y
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
NI+I+ +G+ +E+ D +F M+
Sbjct: 360 -----------------------------------NIVIETFGKAGRIEKMDDVFRKMKY 384
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G++PN ++Y +L+ Y ++ L + + R + V + +N +IN YG++ +
Sbjct: 385 QGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLAT 444
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
L +M+ +P+ IT++T+I + G D L +++ SS +
Sbjct: 445 MKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 148/350 (42%), Gaps = 44/350 (12%)
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK- 386
+ V G ++ LF M G++P + Y +L+ VYG+SEL +A M+
Sbjct: 150 LFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVS 209
Query: 387 -----------------------------------GVQQNVVTYNTMINIYGKSLEHEKA 411
GV + VTYNT+I+ YGK+ E+
Sbjct: 210 DCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEM 269
Query: 412 TNLIQEMQNNGIQ-PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
+++ +M +G P+ T ++II + + + + + + GVQ D + +I+
Sbjct: 270 ESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILIL 329
Query: 471 AYERAGLVAHAKRLLHELKRP----DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
++ +AG+ ++ +++ + I +A R+E+ VFR+ G
Sbjct: 330 SFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKP 389
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+ + ++N YS+ + V ++ D+ ++NA+G+ + LY
Sbjct: 390 NSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELY 449
Query: 587 SQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNPNINKKEL 635
Q+ + C PD++ F M+ Y A F V+ L +++ S+ +I KK L
Sbjct: 450 IQMEERKCK-PDKITFATMIKTYTAHGIFDAVQELEKQMISS-DIGKKRL 497
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 155/676 (22%), Positives = 275/676 (40%), Gaps = 111/676 (16%)
Query: 61 TTPSPYHRRTRTQQQMFL-------DHSIDMDELLASISSTQNEQELHAVMSLYNQRQLS 113
T PSP RR L S+ + L SI S N + ++ S+ + +S
Sbjct: 32 TVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSA--IS 89
Query: 114 IRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVL------------------- 154
+ SL S + D + AL WI++ Y SV++Y +L
Sbjct: 90 PSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLM 149
Query: 155 -----------------RNVLRAKQWHLAH-----------------GLFDEMRQ----- 175
R + + +++ L + GL DEM+Q
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 176 --RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDY 233
+ P+ YTY+ ++ + K G ++ + ++ ++ + + D Y++LI + D
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
A +F + + +AY +I+ A+ EA L +M+D+ P +Y+ L
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ +ER EAL++ EM + ++ T ++ID E+ L M + G+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
PNV++YN L+ Y + + +A+ + LM+ + + N TYN +I Y KS H KA
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMG 448
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
++ +M + P+ +TY+++I ++G D A L + G+ DQ Y +MI +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS-- 506
Query: 474 RAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGC 533
L +++RVEEA +F G ++ ++
Sbjct: 507 -----------------------------LCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 534 MINLYSRNKKYTNVVEVFEKMREVGYFPDS---NVIALVLNAFGKLREFEKADALYSQIH 590
+I+ Y + K + EKM P+S N + L A GKL+E + +I
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 591 DEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGI--YERADR 648
+ V D + L G DF S F+++ S+ K + H + I Y R R
Sbjct: 598 LQPTVSTDTILIHRLLKDG---DFDHAYSRFQQMLSSG--TKPDAHTYTTFIQTYCREGR 652
Query: 649 LNDASRIMNRMNHKAI 664
L DA +M +M +
Sbjct: 653 LLDAEDMMAKMRENGV 668
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 237/530 (44%), Gaps = 17/530 (3%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL L+ + E + P++ Y V++ ++ ++ A L +M ++GL P+ TY+ LI
Sbjct: 342 ALNLVKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ K G+++ ++ ++ ME +S + Y+ LI+ K + KA+ + ++ +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD++ YNS+I+ ++ F A LL M D G+ PD +Y++++ ++R EA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
F + ++ +ID Y + V+E + M PN +++N L+
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
EA L M K G+Q V T +I+ K + + A + Q+M ++G +P+A T
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+T I + + G+L A + K+R +GV D Y ++I Y G A +L ++
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
P + + L + + G ++ M+ ++ VVE
Sbjct: 700 DTGCEPSQHTFLSLIK------HLLEMKYGKQKGSEPELCAMSNMM-------EFDTVVE 746
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLY 608
+ EKM E P++ ++ ++ A+ ++ + + P E+ F +LS
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 609 GARKDFTMVESLFEKLDSNPNINKKE-LHLVVSGIYERADRLNDASRIMN 657
K + + + ++ + E +++ G+Y++ ++ S N
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/544 (21%), Positives = 225/544 (41%), Gaps = 62/544 (11%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L + +++A LL + EK L P+V YN ++ + A + + M R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLM-PNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
L+P+ TY+ LI + K + ++ L +M + V D+V Y++LI+ + G++ A
Sbjct: 423 KLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + + + PD Y SMI+ K+K EA L + GV P+ V Y+ L+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
Y + EA + +M C + T N +I ++E L M K+G++P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V + L+ + F A F+ M G + + TY T I Y + A +++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG------------------- 457
+M+ NG+ P+ TYS++I + G+ + A + +++R +G
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 458 -----------------VQIDQVL-----------------YQTMIVAYERAGLVAHAKR 483
++ D V+ Y+ +I+ G + A++
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 484 LLHELKRPDNI-PRETAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMI-NL 537
+ ++R + I P E L + ++ EA V G + + +I L
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
Y + +K VF+ + + GY+ D ++++ GK E L++ + GC F
Sbjct: 842 YKKGEKERGT-SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 598 DEVH 601
+ +
Sbjct: 901 SQTY 904
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 188/433 (43%), Gaps = 33/433 (7%)
Query: 74 QQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQR-----QLSIRFMVSLLSRETDWQ 128
++ L + + L+ + N + ++SL N R Q + M+ L + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
A L D + +K + +P+V Y ++ +A + AH + ++M + P+ T++ L
Sbjct: 515 EACDLFDSLEQKGV-NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 189 ITHFGKHGLLDSSLFWLQQME----QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
I G L + ++M Q VS D +L L+ K GD+ A S F ++
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQQML 629
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
+S PD Y + I + + +A ++ +MR+NGV PD +YS+L+ Y D +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 305 EALSVFSEMNDAKC-PLDLTTCNIMIDV----YGQLHMVE----------EGDRLFWSMR 349
A V M D C P T +++ + YG+ E E D + +
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 350 KM---GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK-KGVQQNVVTYNTMINIYGKS 405
KM + PN SY L+ E A +F MQ+ +G+ + + +N +++ K
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
+H +A ++ +M G P + +I K G+ +R +FQ L G D++ +
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 466 QTMIVAYERAGLV 478
+ +I + GLV
Sbjct: 870 KIIIDGVGKQGLV 882
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 27/313 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V +++ +L+ + A+ F +M G PD +TY+T I + + G L +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN---- 260
+ +M ++ VS DL YS+LI+ LG + A + R++ + P + S+I
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 261 -VFGKAK-------------LFREARLLLQEMRDNGVCPDTVSYSTLL--AIYVDNERFV 304
+GK K F LL++M ++ V P+ SY L+ V N R
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL- 363
E + + N+ P +L N ++ +L E ++ M +G P + S L
Sbjct: 780 EKVFDHMQRNEGISPSELVF-NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 364 --LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L GE E +F+ + + G ++ + + +I+ GK E L M+ N
Sbjct: 839 CGLYKKGEKE---RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 422 GIQPNAITYSTII 434
G + ++ TYS +I
Sbjct: 896 GCKFSSQTYSLLI 908
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 21/241 (8%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITH-----FGKHG-- 196
SP +F Y+ +++ Q + A + MR G P ++T+ +LI H +GK
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 197 -----------LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-K 244
D+ + L++M + +V+ + Y LI ++G+ A +F + +
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL-AIYVDNERF 303
I+P + +N++++ K K EA ++ +M G P S L+ +Y E+
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK- 847
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
SVF + D I+ID G+ +VE LF M K G + + +Y+ L
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 364 L 364
+
Sbjct: 908 I 908
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 8/366 (2%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ + R A+ L + + + L + +V YN +++ + + K A +F M +
Sbjct: 276 MIRTMGRIGKCDEAVGLFNEMITEGL-TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G P+ YTYS L+ G L ++ ++ G +YS L+ KLG S+A
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG---IYSYLVRTLSKLGHVSEA 391
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+F + + + + +Y SM+ A EA +L ++ + GV DT+ Y+T+ +
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
++ +F +M D+ T NI+I +G++ V+E +F + + +P+
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
++SYN+L+ G++ EA F+ MQ+KG+ +VVTY+T++ +GK+ E A +L +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM G QPN +TY+ ++ EK G+ A L+ K++ G+ D + Y + ER
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL----ERLQ 627
Query: 477 LVAHAK 482
V+H K
Sbjct: 628 SVSHGK 633
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 203/428 (47%), Gaps = 36/428 (8%)
Query: 123 RETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDR 182
R D+ +A + I + + +FAYN++L + + ++ A +F++M++R D
Sbjct: 215 RSRDYSKAFDVYCEI-RRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDE 270
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
YTY+ +I G+ G D ++ +M + ++ ++V Y+ L+++ K KAI +F+R
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 243 LKASSIAPDLIAYNSMINVF-GKAKLFR-------------------------------E 270
+ + P+ Y+ ++N+ + +L R E
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L +M V + SY ++L + +EA+ + S++++ D N +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
G+L + LF M+K G P++ +YN L+ +G EAI++F +++ +
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
++++YN++IN GK+ + ++A +EMQ G+ P+ +TYST++ + K +++ A LF
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVE 510
+++ G Q + V Y ++ E+ G A A L ++K+ P VL R + V
Sbjct: 571 EEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVS 630
Query: 511 EATWVFRQ 518
R+
Sbjct: 631 HGKSRIRR 638
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 209/455 (45%), Gaps = 14/455 (3%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
++ ++ D Q L L+ + K + F Y +L+ LR++ + A ++ E
Sbjct: 173 TVNILIGFFGNTEDLQMCLRLVKKWDLKM----NSFTYKCLLQAYLRSRDYSKAFDVYCE 228
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
+R+ G D + Y+ L+ K + + + M++ + D Y+ +I ++G
Sbjct: 229 IRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK 285
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+A+ +F + + +++ YN+++ V K K+ +A + M + G P+ +YS
Sbjct: 286 CDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
LL + V + V V + +K + + ++ +L V E RLF M
Sbjct: 346 LLNLLVAEGQLVRLDGV---VEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFP 402
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
++ SY ++L + EAI + + +KGV + + YNT+ + GK +
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+L ++M+ +G P+ TY+ +I+ + + G++D A +F++L S + D + Y ++I
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 473 ERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ G V A E++ PD + T + + RVE A +F + G +I
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
+ +++ +N + V+++ KM++ G PDS
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDS 617
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 195/466 (41%), Gaps = 50/466 (10%)
Query: 181 DRYTYSTLITHFGKHGL---LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
D + Y+ +I + L D L M + NV G++ + LI D +
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL 191
Query: 238 SIFAR--LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+ + LK +S Y ++ + +++ + +A + E+R G D +Y+ LL
Sbjct: 192 RLVKKWDLKMNSFT-----YKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD 246
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+E+ A VF +M C D T IMI G++ +E LF M G+
Sbjct: 247 ALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTL 303
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN--------------- 400
NVV YNTL++V + ++ +AI +F M + G + N TY+ ++N
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 401 ----------IYG------KSLEH-EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
IY L H +A L +M + ++ +Y +++ AGK
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETA 499
A + K+ GV D ++Y T+ A + ++H L ++K+ PD
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I R V+EA +F + + DI + +IN +N F++M+E G
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
PD + ++ FGK E A +L+ ++ +GC P+ V + +L
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ-PNIVTYNIL 588
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 28/435 (6%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V YN+++ + + + +A G DE ++GL P+ +Y+ LI + K D +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L QM + D+V Y LI G A+++ +L ++PD YN +++ K
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
F A+LL EM D + PD Y+TL+ ++ + F EA VFS + +D+
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N MI + + M++E M + + P+ +Y+T++ Y + + AI +FR M+
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII-SIWEKAGKL 443
K + NVVTY ++IN + + + A +EMQ + PN +TY+T+I S+ +++ L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
++A ++ + ++ ++V + ++ + + + ++L E PD + +
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVK----KTSGKVLAE---PDGSNHGQSSLFS 695
Query: 504 ARARRVEEATW-----VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
R++ W + A V+ + CM +KM + G
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ---------------DKMVKKG 740
Query: 559 YFPDSNVIALVLNAF 573
+ PD A +L+ F
Sbjct: 741 FSPDPVSFAAILHGF 755
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 216/510 (42%), Gaps = 44/510 (8%)
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
+A+ + D++ E P V A N +L ++++++ A ++DEM RG + D Y+ L
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL 211
Query: 189 ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI 248
+ G ++ ++ ++V Y+ +I KLGD A +F LK
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
P L + +MIN F K F + LL E+++ G+ ++++ N
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL---------RVSVWFLN-------- 314
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
NI+ Y + V+ + + W + +P+V +YN L+
Sbjct: 315 -----------------NIIDAKYRHGYKVDPAESIGWIIAN-DCKPDVATYNILINRLC 356
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ A+ KKG+ N ++Y +I Y KS E++ A+ L+ +M G +P+ +
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE- 487
TY +I +G +D A + KL GV D +Y ++ + G AK L E
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 488 LKR---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
L R PD T I R+ +EA VF + G D+ MI + R+
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGML 536
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-Q 603
+ +M E PD + +++ + K ++ A ++ + C P+ V +
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK-PNVVTYTS 595
Query: 604 MLSLYGARKDFTMVESLFEKL---DSNPNI 630
+++ + + DF M E F+++ D PN+
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 56/351 (15%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
SP YN+++ + + ++ A LF EM R + PD Y Y+TLI F +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS-------- 498
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
GD+ +A +F+ + D++ +N+MI F
Sbjct: 499 ---------------------------GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
++ + EA + M + + PD +YST++ YV + A+ +F M KC ++
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 324 TCNIMIDVY---GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR-VYGESELFGEAIHL 379
T +I+ + G M EE F M+ + PNVV+Y TL+R + ES +A++
Sbjct: 592 TYTSLINGFCCQGDFKMAEE---TFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 380 FRLMQKKGVQQNVVTYNTMINIY-----GKSLEHEKATN---------LIQEMQNNGIQP 425
+ LM N VT+N ++ + GK L +N M+++G
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+A Y++ + G + A M K+ G D V + ++ + G
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 174/385 (45%), Gaps = 10/385 (2%)
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
PD ++ ++LL++ V + R +A V+ EM D +D + I++ VE G +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
G PN+V YNT++ Y + A +F+ ++ KG + T+ TMIN + K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG-KLDRAAMLFQKLRSSGVQIDQV 463
+ + L+ E++ G++ + + II + G K+D A + + ++ + D
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVA 346
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQA 519
Y +I + G A L E + P+N+ I +++ + A+ + Q
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 520 FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREF 579
G DI +G +I+ + + V + K+ + G PD+ + ++++ K F
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 580 EKADALYSQIHDEGCVFPDE-VHFQMLSLYGARKDFTMVESLFE-KLDSNPNINKKELHL 637
A L+S++ D + PD V+ ++ + DF +F ++ ++ +
Sbjct: 467 LPAKLLFSEMLDRN-ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 638 VVSGIYERADRLNDASRIMNRMNHK 662
++ G + R+ L++A MNRMN +
Sbjct: 526 MIKG-FCRSGMLDEALACMNRMNEE 549
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 176/351 (50%), Gaps = 4/351 (1%)
Query: 119 SLLSRETDWQR---ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
SLL+ W R A+AL D I + P+V Y ++R + + + + A LF++M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G P+ TY+ L+T + G + + L+ M + + +++ ++ LI+ K+G +
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A ++ + S+ PD+ Y S+IN L EAR + M NG P+ V Y+TL+
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ ++R + + +F EM+ + T ++I Y + + +F M P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++ +YN LL + +A+ +F M+K+ + N+VTY +I K + E A +L
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ + G++PN ITY+T+IS + + G + A LF+K++ G ++ +Y+
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 196/425 (46%), Gaps = 4/425 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ + +L + + ++ + LF++M+ G+ P T + ++ + +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + DLV +++L+ AI++F ++ P+++ Y ++I K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ A L +M NG P+ V+Y+ L+ + R+ +A + +M + ++ T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ID + ++ + E L+ M +M + P+V +Y +L+ L EA +F LM+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+ G N V Y T+I+ + KS E + EM G+ N ITY+ +I + G+ D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD---NIPRETAIM 501
A +F ++ S D Y ++ G V A + +++ + NI T I+
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 502 V-LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+ + +VE+A +F F+ G ++ + MI+ + R +F+KM+E G+
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 561 PDSNV 565
P+ +V
Sbjct: 501 PNESV 505
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 192/438 (43%), Gaps = 12/438 (2%)
Query: 70 TRTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQL--------SIRFMVSLL 121
TR L ID LL+ I+ V+SL+ Q Q+ + ++ +
Sbjct: 72 TRMVHSRPLPSIIDFTRLLSVIAKMN---RYDVVISLFEQMQILGIPPLLCTCNIVMHCV 128
Query: 122 SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPD 181
+ RA L + K + P + + +L + A LFD++ G P+
Sbjct: 129 CLSSQPCRASCFLGKM-MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 182 RYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
TY+TLI K+ L+ ++ QM + ++V Y+ L+ ++G + A +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNE 301
+ I P++I + ++I+ F K EA+ L M V PD +Y +L+
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
EA +F M C + +I + + VE+G ++F+ M + G+ N ++Y
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L++ Y A +F M + ++ TYN +++ + + EKA + + M+
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
+ N +TY+ II K GK++ A LF L S G++ + + Y TMI + R GL+ A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 482 KRLLHELKRPDNIPRETA 499
L ++K +P E+
Sbjct: 488 DSLFKKMKEDGFLPNESV 505
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%), Gaps = 4/358 (1%)
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
++ A+ +F R+ S P +I + +++V K + L ++M+ G+ P + +
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + + A +M DL T +++ Y + +E+ LF + MG
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+PNVV+Y TL+R ++ A+ LF M G + NVVTYN ++ + A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L+++M I+PN IT++ +I + K GKL A L+ + V D Y ++I
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRE----TAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
GL+ A+++ + ++R P E T I +++RVE+ +F + G V +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+ +I Y + EVF +M PD ++L+ + EKA ++
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 133/314 (42%), Gaps = 12/314 (3%)
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
SY +LR + F +A+ LF M +++ + ++++ K ++ +L ++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
Q GI P T + ++ + + RA+ K+ G + D V + +++ Y +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 479 AHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
A L ++ +P+ + T I L + R + A +F Q G ++ + +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC 594
+ ++ + + M + P+ +++AF K+ + +A LY+ + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN-VMIQMS 288
Query: 595 VFPDEVHF----QMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLN 650
V+PD + L +YG + + L E+ PN + ++ + + ++ R+
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN---EVIYTTLIHGFCKSKRVE 345
Query: 651 DASRIMNRMNHKAI 664
D +I M+ K +
Sbjct: 346 DGMKIFYEMSQKGV 359
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 200/422 (47%), Gaps = 5/422 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ ++ +L + + ++ LF + G++ D Y+++TLI F + L +L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + +V + +L+ + + +A+S+ ++ P+++ YN++I+ +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A +L+ M+ G+ PD V+Y++L+ + + + + S+M D+ T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ +IDVYG+ + E + + M + + PN+V+YN+L+ L EA + ++
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
KG N VTYNT+IN Y K+ + ++ M +G+ + TY+T+ + +AGK
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN----IPRETAI 500
A + ++ S GV D + ++ G + A L +L++ I I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM-REVGY 559
L +A +VE+A ++F G D+ + M+ R + + E++ KM +E G
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Query: 560 FP 561
P
Sbjct: 497 MP 498
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 201/421 (47%), Gaps = 12/421 (2%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQL--------SIRFMVSLLSRETDWQRALAL 133
+D LL +I+ N+ E AV+SL+ ++ S ++ R AL+
Sbjct: 80 VDFSRLLIAIAKL-NKYE--AVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 134 LDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
L + K + PS+ + ++ +++ A L D++ G P+ Y+T+I
Sbjct: 137 LGKM-MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI 253
+ G ++++L L+ M++ + D+V Y++LI G + + I + + I+PD+I
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
++++I+V+GK EA+ EM V P+ V+Y++L+ + EA V + +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
+ T N +I+ Y + V++G ++ M + G++ + +YNTL + Y ++ F
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
A + M GV ++ T+N +++ + KA ++++Q + ITY+ I
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
I KA K++ A LF L GV D + Y TM++ R L A L ++++ D
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDG 495
Query: 494 I 494
+
Sbjct: 496 L 496
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 200/451 (44%), Gaps = 10/451 (2%)
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNV 213
LR+ L + +++ A LF +M + P +S L+ K ++ + + +E +
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
S DL ++ LI+ + S A+S ++ P ++ + S++N F F EA
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
L+ ++ G P+ V Y+T++ + + AL V M D+ T N +I
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
R+ M +MGI P+V++++ L+ VYG+ EA + M ++ V N+V
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 394 TYNTMIN---IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
TYN++IN I+G E +K N+ + + G PNA+TY+T+I+ + KA ++D +
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNV---LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARA 506
+ GV D Y T+ Y +AG + A+++L + PD + L
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
++ +A + V I + +I + K + +F + G PD
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 567 ALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
++ + R + +A LY ++ E + P
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 184/415 (44%), Gaps = 6/415 (1%)
Query: 193 GKHGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPD 251
G H + + +L M + + +V +S L+ KL Y IS+F L+ I+ D
Sbjct: 54 GLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD 113
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS 311
L ++ ++I+ F + A L +M G P V++ +L+ + RF EA+S+
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD 173
Query: 312 EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
++ ++ N +ID + V + M+KMGI P+VV+YN+L+ S
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 372 LFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYS 431
+G + + M + G+ +V+T++ +I++YGK + +A EM + PN +TY+
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR- 490
++I+ G LD A + L S G + V Y T+I Y +A V ++L + R
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 491 ---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
D T +A + A V + + G D+ F +++ + K
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 548 VEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF 602
+ E +++ +++ K + E A L+ + +G V PD + +
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG-VSPDVITY 467
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 188/381 (49%), Gaps = 4/381 (1%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
V+++ ++++ A + + L E+ + G +P+ Y+TLI K G ++ +
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+M + + + Y+ LI K G + ++ +++ + P+L YN ++N K
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
++A + EMR+ GV + V+Y+TL+ + EA V +M +L T N
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
+ID + + + + L ++ G+ P++V+YN L+ + A + + M+++
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G++ + VTY +I+ + +S EKA L M+ G+ P+ TYS +I + G+++ A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA----IMV 502
+ LF+ + + ++V+Y TMI+ Y + G A +LL E++ + P + I V
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 503 LARARRVEEATWVFRQAFAAG 523
L + R+ +EA + + +G
Sbjct: 523 LCKERKSKEAERLVEKMIDSG 543
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 218/479 (45%), Gaps = 38/479 (7%)
Query: 132 ALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP----------- 180
+LL ++ E Y V++ + ++++ +L+ F+EM G P
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF 138
Query: 181 -----------------------DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
D Y++ LI + G ++ S L ++ + S ++
Sbjct: 139 VVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV 198
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
V+Y+ LI+ K G+ KA +F + + + Y +IN K + ++ + ++
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
M+++GV P+ +Y+ ++ + R +A VF EM + ++ T N +I +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ E +++ M+ GI PN+++YNTL+ + G+A+ L R ++ +G+ ++VTYN
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+++ + + + A +++EM+ GI+P+ +TY+ +I + ++ +++A L + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE----TAIMVLARARRVEEAT 513
+ D Y +I + G + A RL + + P E T I+ + A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 514 WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
+ ++ +++ + MI + + +K + EKM + G P +++++L+ A
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 181/333 (54%), Gaps = 7/333 (2%)
Query: 108 NQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
N+R ++ +++ L + ++ + + + E ++ P+++ YN V+ + + + A
Sbjct: 232 NERTYTV--LINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDAF 288
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELS 227
+FDEMR+RG++ + TY+TLI + L+ + + QM+ D ++ +L+ Y+ LI+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
+G KA+S+ LK+ ++P L+ YN +++ F + A +++EM + G+ P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
V+Y+ L+ + ++ +A+ + M + D+ T +++I + + E RLF S
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
M + EPN V YNT++ Y + A+ L + M++K + NV +Y MI + K +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
++A L+++M ++GI P+ ++I+S+ +A
Sbjct: 529 SKEAERLVEKMIDSGIDPS----TSILSLISRA 557
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 196/412 (47%), Gaps = 6/412 (1%)
Query: 96 NEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLR 155
NE + V+ +Y S ++ + +++ LL + E +SP+V Y ++
Sbjct: 153 NENKSKVVLDVY-----SFGILIKGCCEAGEIEKSFDLLIELTEFG-FSPNVVIYTTLID 206
Query: 156 NVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG 215
+ + A LF EM + GL + TY+ LI K+G+ ++M++D V
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
+L Y+ ++ K G A +F ++ ++ +++ YN++I + EA ++
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
+M+ +G+ P+ ++Y+TL+ + + +ALS+ ++ L T NI++ + +
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
++ M + GI+P+ V+Y L+ + S+ +AI L M++ G+ +V TY
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
+ +I+ + + +A+ L + M +PN + Y+T+I + K G RA L +++
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
+ + Y+ MI + A+RL+ ++ P + + +++RA+
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAK 558
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 154/394 (39%), Gaps = 77/394 (19%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
Y +IN + +++ + EM DNG P + ++ LL V + F + S F+E N
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+K LD+ + I+I + +E+ L + + G PNV
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV----------------- 198
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI------------------- 415
V Y T+I+ K E EKA +L
Sbjct: 199 ------------------VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 416 ----------------QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
++MQ +G+ PN TY+ +++ K G+ A +F ++R GV
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWV 515
+ V Y T+I R + A +++ ++K P+ I T I ++ +A +
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
R + G + + +++ + R + ++ ++M E G P ++++ F +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 576 LREFEKADALYSQIHDEGCVFPDEVHFQMLSLYG 609
EKA L + + G V PD VH + ++G
Sbjct: 421 SDNMEKAIQLRLSMEELGLV-PD-VHTYSVLIHG 452
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
S+ F + L L + + + Y +IN Y +S + + EM +NG P +
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNC 131
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
++ +++ + ++ F + +S V +D + +I AG + + LL EL
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190
Query: 490 R----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
P+ + T I + +E+A +F + G V + + +IN +N
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
E++EKM+E G FP+ V+N K + A ++ ++ + G
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 130/635 (20%), Positives = 272/635 (42%), Gaps = 48/635 (7%)
Query: 58 WTRTTPSP---YHRRTRTQQQMFLDHSIDMDELLASISST-QNEQELHAVMSLYNQRQLS 113
W + TP Y R Q M+ H + + + +S Q ++ VMS + + LS
Sbjct: 97 WIKRTPEQMVQYLEDDRNGQ-MYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFVAK-LS 154
Query: 114 IRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM 173
R M +L + W++ W+ + Y PSV Y +VLR + + +A F EM
Sbjct: 155 FRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEM 214
Query: 174 RQRGLAPDRYTYSTLITHFGKHG-----------------LLDSSLF------------- 203
+ G PD T++ + + G LL +S++
Sbjct: 215 LEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFH 274
Query: 204 ------WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
WL+ +E+ V + Y+ ++ K G +A+ F +K+ P+ + Y+S
Sbjct: 275 GKVIDLWLEMVEE-GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSS 333
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
+I++ KA + +A L ++MR G+ P + +T+L++Y E + +ALS+F++M K
Sbjct: 334 VISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNK 393
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
P D ++I +YG+L + + +F ++ + + +Y + +V+ S +A+
Sbjct: 394 IPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKAL 453
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ +M+ + + + Y M+ Y K + A + + G+ P+A + + +++++
Sbjct: 454 DVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLY 512
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE 497
+ ++A +++ V D LY+T + Y + G+VA A+ L+ ++ R +
Sbjct: 513 TRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDN 572
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
+ LA + + ++ D+ G M+NL + + M +
Sbjct: 573 RFVQTLAESMHIVNKHDKHEAVLNVSQL-DVMALGLMLNLRLKEGNLNETKAILNLMFKT 631
Query: 558 GYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMV 617
S+ + V+++F + + KA+ + I G +E ++++YG +
Sbjct: 632 DL--GSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA 689
Query: 618 ESLFEKLDSNPNINKKELHLVVSGIYERADRLNDA 652
+ L+ + K + ++ Y R L DA
Sbjct: 690 KRLYLAAGESKTPGKSVIRSMIDA-YVRCGWLEDA 723
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 208/458 (45%), Gaps = 11/458 (2%)
Query: 96 NEQELH-AVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVL 154
N+ + H AV+++ +++ M++L +E + A+L+ + + L S +V N V+
Sbjct: 586 NKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV---NRVI 642
Query: 155 RNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK-HGLLDSSLFWLQQMEQDNV 213
+ +R A + D + + GL + T +TLI +G+ H L ++ +L E
Sbjct: 643 SSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGES-KT 701
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
G V+ S +I+ + G A +F P + + ++N REA
Sbjct: 702 PGKSVIRS-MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+ + + + DTV Y+TL+ ++ + A ++ M+ + P + T N MI VYG
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ +++ +F + R+ G+ + Y ++ YG+ EA+ LF MQKKG++
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
+YN M+ I S H + L+Q M+ NG + TY T+I ++ ++ + A +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRV 509
+ G+ + + +++ A +AG++ A+R ++ PD+ + T +
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDA 1000
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
E+ + + + +D V + +LY K +V
Sbjct: 1001 EKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQDV 1038
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 161/375 (42%), Gaps = 40/375 (10%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
A N +I+ F + +A ++ + G+ + + +TL+A+Y + EA ++
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA 696
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
++K P + MID Y + +E+ LF + G +P V+ + L+
Sbjct: 697 GESKTP-GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKH 755
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA H+ R +K ++ + V YNT+I ++ + + A+ + + M +G+ + TY+T+
Sbjct: 756 REAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTM 815
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR--- 490
IS++ + +LD+A +F R SG+ +D+ +Y MI+ Y + G ++ A L E+++
Sbjct: 816 ISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGI 875
Query: 491 -PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
P + + A +R E + + G D+S + +I +Y+ + ++ +
Sbjct: 876 KPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEK 935
Query: 550 V-----------------------------------FEKMREVGYFPDSNVIALVLNAFG 574
+ KM E G PDS +L +
Sbjct: 936 TITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Query: 575 KLREFEKADALYSQI 589
+ EK Y ++
Sbjct: 996 TCGDAEKGILFYEKM 1010
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/646 (17%), Positives = 239/646 (36%), Gaps = 132/646 (20%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++SL + DW++A+ L + + + + PS + +L + + + A LF +M +
Sbjct: 334 VISLSVKAGDWEKAIGLYEDMRSQGIV-PSNYTCATMLSLYYKTENYPKALSLFADMERN 392
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ D +I +GK GL + ++ E+ N+ D Y + ++ G+ KA
Sbjct: 393 KIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKA 452
Query: 237 ISIFARLKASSIA----------------------------------PDLIAYNSMINVF 262
+ + +K I PD + N M+N++
Sbjct: 453 LDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLY 512
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY---------------------VDNE 301
+ L +A+ ++++ + V D Y T + +Y V +
Sbjct: 513 TRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDN 572
Query: 302 RFVEALSVF----------------------------------SEMNDAKCPLDL----- 322
RFV+ L+ +N+ K L+L
Sbjct: 573 RFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTD 632
Query: 323 ---TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
+ N +I + + V + + + + ++G+ + TL+ VYG EA L
Sbjct: 633 LGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRL 692
Query: 380 FRLM-QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+ + K ++V+ +MI+ Y + E A L E G P A+T S +++
Sbjct: 693 YLAAGESKTPGKSVI--RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT 750
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRET 498
GK A + + +++D V Y T+I A AG
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG---------------------- 788
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+++ A+ ++ + +G I + MI++Y R + +E+F R G
Sbjct: 789 ---------KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSG 839
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVE 618
+ D + ++ +GK + +A +L+S++ +G + M+ + + V+
Sbjct: 840 LYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVD 899
Query: 619 SLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
L + ++ N +L + +Y + + +A + + + K I
Sbjct: 900 ELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 128/323 (39%), Gaps = 31/323 (9%)
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
D W ++ P+VV Y +LR+YG+ A F M + G + + V TM+
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCT 232
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
Y + H + +Q I + Y+ ++S +K + L+ ++ GV +
Sbjct: 233 YARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPN 292
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFA 521
+ Y ++ +Y + G A + E+K +P E
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV----------------------- 329
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
+ +I+L + + + ++E MR G P + A +L+ + K + K
Sbjct: 330 --------TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPK 381
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSG 641
A +L++ + + + ++ +YG F +S+FE+ + + ++ +L +S
Sbjct: 382 ALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQ 441
Query: 642 IYERADRLNDASRIMNRMNHKAI 664
++ + + A ++ M + I
Sbjct: 442 VHLNSGNVVKALDVIEMMKTRDI 464
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 182/355 (51%), Gaps = 5/355 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF---GKHGLLDSS 201
P+VF +NVV+ + + + + A + ++M+ G +P+ +Y+TLI + G +G + +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
L++M +++VS +L ++ LI+ K + ++ +F + + P++I+YNS+IN
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
EA + +M GV P+ ++Y+ L+ + N+ EAL +F +
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
N++ID Y +L +++G L M + GI P+V +YN L+ + A LF
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
+ KG+ ++VT++ ++ Y + E KA L++EM G++P +TY+ ++ + K G
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 442 KLDRAA-MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
L A M Q + ++++ Y ++ Y + G + A LL+E+ +P
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 16/378 (4%)
Query: 239 IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
++ + I P++ +N +IN K +AR ++++M+ G P+ VSY+TL+ Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 299 ---DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
N + +A +V EM + +LTT NI+ID + + + ++F M ++P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
NV+SYN+L+ EAI + M GVQ N++TYN +IN + K+ ++A ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++ G P Y+ +I + K GK+D L +++ G+ D Y +I R
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 476 GLVAHAKRLLHELKR---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
G + AK+L +L PD + + R +A + ++ G +
Sbjct: 450 GNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 533 CMINLYSRN---KKYTNVVEVFEKMREVGYFPDSNVIA--LVLNAFGKLREFEKADALYS 587
++ Y + K TN+ EK R + NV + ++L + + + E A+ L +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRL----RMNVASYNVLLQGYSQKGKLEDANMLLN 565
Query: 588 QIHDEGCVFPDEVHFQML 605
++ ++G V P+ + ++++
Sbjct: 566 EMLEKGLV-PNRITYEIV 582
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 181/390 (46%), Gaps = 17/390 (4%)
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+S L+ + R + V+ EM K ++ T N++I+ + + + +
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 347 SMRKMGIEPNVVSYNTLLRVY----GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
M+ G PNVVSYNTL+ Y G +++ +A + + M + V N+ T+N +I+ +
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
K + + +EM + ++PN I+Y+++I+ GK+ A + K+ S+GVQ +
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP--RETAIMVLARAR--RVEEATWVFRQ 518
+ Y +I + + ++ A + +K +P R +++ A + ++++ + +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
G V D+ + C+I RN ++F+++ G PD +++ + + E
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485
Query: 579 FEKADALYSQIHDEGCVFPDEVHFQML----SLYGARKDFTMVESLFEKLDSNPNINKKE 634
KA L ++ G + P + + ++ G K T + + EK + +N
Sbjct: 486 SRKAAMLLKEMSKMG-LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK-ERRLRMNVAS 543
Query: 635 LHLVVSGIYERADRLNDASRIMNRMNHKAI 664
++++ G Y + +L DA+ ++N M K +
Sbjct: 544 YNVLLQG-YSQKGKLEDANMLLNEMLEKGL 572
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V YN ++ + R A LFD++ +GL PD T+ L+ + + G +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFG 263
L++M + + + Y+ +++ K G+ A ++ ++ K + ++ +YN ++ +
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ +A +LL EM + G+ P+ ++Y + VD
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 211/452 (46%), Gaps = 7/452 (1%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
F YN + ++R ++ LA ++ +M+ G + +TYS I+ K D L
Sbjct: 45 FDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSD 104
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
ME D+ ++ ++L + A+ F + PD+++Y +IN +A
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS-VFSEMNDAKCPLDLTTCN 326
+A + M +GV PD + + L+ + A V E+ A+ L N
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
+I + + +E+ + L M K+G EP++V+YN LL Y ++ + A + M +
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATN-LIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G+Q + +YN ++ + + +K N +++EM+ G + ++YST+I + +A +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRK 343
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIM 501
A LF+++R G+ ++ V Y ++I A+ R G + AK+LL ++ PD I T +
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
L ++ V++A VF D + +I+ R+ + T +++FE M+ P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
D ++ + ++ A ++ Q+ D+G
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 187/392 (47%), Gaps = 17/392 (4%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P ++A+NV L + R + A F M QRG PD +Y+ LI + G + ++
Sbjct: 110 FIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAV 169
Query: 203 FWLQQMEQDNVSGDLVLYSNLIEL---SRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
M + VS D + L+ +RK+ + ++ +K++ + + YN++I
Sbjct: 170 EIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA--EEIKSARVKLSTVVYNALI 227
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+ F KA +A L M G PD V+Y+ LL Y DN A V +EM +
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP----NVVSYNTLLRVYGESELFGE 375
LD + N ++ + + V D+ + M K +EP +VVSY+TL+ + + +
Sbjct: 288 LDAYSYNQLLKRHCR---VSHPDKCYNFMVK-EMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
A LF M++KG+ NVVTY ++I + + A L+ +M G+ P+ I Y+TI+
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----P 491
K+G +D+A +F + + D + Y ++I R+G V A +L ++K P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
D + + I L R +++ A V+ Q G
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
V +Y+ ++ RA A+ LF+EMRQ+G+ + TY++LI F + G + L
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
QM + +S D + Y+ +++ K G+ KA +F + I PD I+YNS+I+ ++
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
EA L ++M+ CPD +++ ++ + ++ A V+ +M D LD +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 327 IMI 329
+I
Sbjct: 505 TLI 507
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 156/364 (42%), Gaps = 38/364 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V +Y +++ + RA + A +++ M + G++PD + L+ +D +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 205 L-QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ ++++ V V+Y+ LI K G KA ++ + + PDL+ YN ++N +
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 264 KAKLFREAR------------------------------------LLLQEMRDNGVCPDT 287
+ + A +++EM G C D
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DV 325
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
VSYSTL+ + +A +F EM +++ T +I + + +L
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
M ++G+ P+ + Y T+L +S +A +F M + + + ++YN++I+ +S
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
+A L ++M+ P+ +T+ II + KL A ++ ++ G +D+ + T
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 468 MIVA 471
+I A
Sbjct: 506 LIKA 509
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/480 (20%), Positives = 194/480 (40%), Gaps = 50/480 (10%)
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K G A+ +F ++ SS YN I V + F A + +M+ G
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+YS ++ ++F ++ S+M D+ N+ +D+ + + V + F+ M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN----------------- 391
+ G EP+VVSY L+ + +A+ ++ M + GV +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 392 -------------------VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
V YN +I+ + K+ EKA L M G +P+ +TY+
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP- 491
+++ + L RA + ++ SG+Q+D Y ++ +R V+H + + + +
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL---KRHCRVSHPDKCYNFMVKEM 317
Query: 492 ------DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
D + T I RA +A +F + G V ++ + +I + R +
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
++ ++M E+G PD +L+ K +KA +++ + + + PD + + L
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE-ITPDAISYNSL 436
Query: 606 SLYGARKDFTMVES--LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKA 663
+ G + + E+ LFE + + + G R +L+ A ++ ++M K
Sbjct: 437 -ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 232/551 (42%), Gaps = 59/551 (10%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKA 141
+ D LLA+ N Q+ H VM R M+ S A+ ++ + +
Sbjct: 132 VTADSLLAN----GNLQKAHEVM----------RCMLRNFSEIGRLNEAVGMVMDMQNQG 177
Query: 142 LYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
L +PS N VL + A +FDEM RG+ PD +Y ++ + G + +
Sbjct: 178 L-TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 202 LFWLQQMEQ-----DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYN 256
WL M Q DN + L+L + L E G ++AI F ++ P+LI +
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLIL-TALCE----NGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 257 SMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM--N 314
S+I+ K ++A +L+EM NG P+ +++ L+ +A +F ++ +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
D P ++ T MI Y + + + LF M++ G+ PNV +Y TL+ + ++ FG
Sbjct: 352 DTYKP-NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A L LM +G N+ TYN I+ K +A L+ + + G++ + +TY+ +I
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
K +++A F ++ +G + D L +I A+
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF---------------------- 508
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
R ++++E+ +F+ + G + + MI+ Y + ++ F M
Sbjct: 509 ---------CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDF 614
+ G PDS +++ K ++A LY + D G P+ + Y R D
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDS 619
Query: 615 TMVESLFEKLD 625
L E LD
Sbjct: 620 ANAMILLEPLD 630
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 3/419 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P++ + ++ + + A + +EM + G P+ YT++ LI K G + +
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 203 -FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
+L+ + D ++ Y+++I K ++A +F+R+K + P++ Y ++IN
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
KA F A L+ M D G P+ +Y+ + R EA + ++ D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
T I+I + + + + F M K G E ++ N L+ + + E+ LF+
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
L+ G+ TY +MI+ Y K + + A M+ +G P++ TY ++IS K
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Query: 442 KLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR-ETAI 500
+D A L++ + G+ +V T+ Y + A+A LL L + I T +
Sbjct: 583 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLV 642
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM-REVG 558
L ++V A F++ D S + K V ++ E++ R VG
Sbjct: 643 RKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISRGVG 701
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/554 (23%), Positives = 235/554 (42%), Gaps = 58/554 (10%)
Query: 66 YHRRTRTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRET 125
+H R + ++H + EL+ S +E +V+ Y + +
Sbjct: 47 HHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMP------------ 94
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
+AL + + E P++ +YN +L + AKQW LF G+AP+ TY
Sbjct: 95 --DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+ LI K + + +L M ++ D+ YS +I K G A+ +F +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREA-----RLL-------------------------- 274
+APD+ YN +I+ F K K + A RLL
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 275 -----LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
+ M+ N D +YS+L+ D +A SVF+E+++ K +D+ T N M+
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ + ++E L W + + N+VSYN L++ E+ EA ++RLM KG
Sbjct: 333 GGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
+ TY I+ + KA ++QE++++G + Y++II K +L+ A+ L
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLAR 505
+++ GV+++ + +I R + A L E+ RP + I L +
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD--- 562
A + EA+ ++ G D+ + ++ R++K +E++ + + G D
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 563 SNVIALVLNAFGKL 576
N++ L + GKL
Sbjct: 572 HNILIHGLCSVGKL 585
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 214/519 (41%), Gaps = 75/519 (14%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ + ++ ++++A LDW+ ++ + P VF+Y+ V+ ++ +A + A LFDEM +R
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 177 GLAPDRYTYSTLITHF------------------------------------GKHGLLDS 200
G+APD Y+ LI F K G +D
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 201 SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN 260
L ++M+Q+ DL YS+LI G+ KA S+F L + D++ YN+M+
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 261 VF---GKAK----LFR---------------------------EARLLLQEMRDNGVCPD 286
F GK K L+R EA ++ + M G D
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+Y + N +AL V E+ + LD+ +ID + +EE L
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M K G+E N N L+ GEA R M K G + VV+YN +I K+
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ +A+ ++EM NG +P+ TYS ++ + K+D A L+ + SG++ D +++
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 467 TMIVAYERAGLVAHAKRLL----HELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+I G + A ++ H + + T + + AT ++ +
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
G DI + ++ + + +E F+ R G FP
Sbjct: 634 GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 212/488 (43%), Gaps = 38/488 (7%)
Query: 110 RQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
+ LS + ++ LL E + + A AL D Y+ S Y+ +LR + + + +
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM-EQDNVSGDLVLYSNLIELSR 228
+ +R + D ++I +GK+ + D +L ++M E + Y+ L+
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
+ + K S+FA + + +AP+L YN +I + K K F +AR L M G PD
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
SYST++ + +AL +F EM++ D+T NI+ID + ++E D
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF-----LKEKD------ 234
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
+ T + ++ RL++ V NV T+N MI+ K
Sbjct: 235 -----------HKTAMELWD------------RLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ + + M+ N + + TYS++I AG +D+A +F +L ID V Y TM
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 469 IVAYERAGLVAHAKRL--LHELKRPDNI-PRETAIMVLARARRVEEATWVFRQAFAAGEV 525
+ + R G + + L + E K NI I L +++EAT ++R A G
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
D + +G I+ N + V +++ G D A +++ K + E+A L
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 586 YSQIHDEG 593
++ G
Sbjct: 452 VKEMSKHG 459
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 41/403 (10%)
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
EK LY+ Y+ ++ + A A +F+E+ +R + D TY+T++ F + G +
Sbjct: 287 EKDLYT-----YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
SL + ME N S ++V Y+ LI+ + G +A I+ + A A D Y
Sbjct: 342 KESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I+ +A ++QE+ +G D +Y++++ +R EA ++ EM+
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA-- 376
L+ CN +I + + E M K G P VVSYN L+ ++ FGEA
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 377 ---------------------------------IHLFRLMQKKGVQQNVVTYNTMINIYG 403
+ L+ + G++ +V+ +N +I+
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
+ + A ++ M++ N +TY+T++ + K G +RA +++ + G+Q D +
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
Y T++ V++A + + P +L RA
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
+S ++ L + + A A + + E + P + Y+++L + R ++ LA L+
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENG-WKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
+ Q GL D ++ LI G LD ++ + ME N + +LV Y+ L+E K+G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
D ++A I+ + + PD+I+YN+++ + A + R++G+ P +++
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 292 TLLAIYVD 299
L+ V+
Sbjct: 679 ILVRAVVN 686
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/554 (20%), Positives = 235/554 (42%), Gaps = 47/554 (8%)
Query: 96 NEQELHAVMSLYNQRQLSIR----FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYN 151
N AV+S + + R MV R D RA + + + + +P+ Y
Sbjct: 290 NGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGI-TPTSRIYT 348
Query: 152 VVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW------- 204
++ + A +M++ G+ TYS ++ F K G +++ +W
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 205 ----------------------------LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+++ME++ + + +Y +++ + D K
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F RLK P ++ Y +IN++ K +A + + M++ GV + +YS ++
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+V + + A +VF +M D+ N +I + + ++ + M+K+ P
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
++ ++ Y +S ++ +F +M++ G V T+N +IN + + EKA ++
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM G+ N TY+ I+ + G +A F +L++ G+ +D Y+ ++ A ++G
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 477 LVAHAKRLLHELKRPDNIPRET---AIMVLARARR--VEEATWVFRQAFAAGEVNDISVF 531
+ A + E+ NIPR + I++ ARR V EA + +Q G DI +
Sbjct: 709 RMQSALAVTKEMS-ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
I+ S+ + E+M +G P+ ++ + + EKA + Y ++
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Query: 592 EGCVFPDEVHFQML 605
G + PD+ + L
Sbjct: 828 MG-IKPDKAVYHCL 840
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 205/445 (46%), Gaps = 11/445 (2%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+RA AL+ + E+ + +P + Y+ ++ +F +++ G P TY
Sbjct: 431 ERAEALVREMEEEGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
LI + K G + +L + M+++ V +L YS +I KL D++ A ++F +
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
+ PD+I YN++I+ F A ++EM+ P T ++ ++ Y + +L
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
VF M C + T N +I+ + +E+ + M G+ N +Y +++ Y
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
G+A F +Q +G+ ++ TY ++ KS + A + +EM I N+
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
Y+ +I W + G + AA L Q+++ GV+ D Y + I A +AG + A + + E
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 488 LK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMI-NLYSRNK 542
++ +P+ T I ARA E+A + + A G D +V+ C++ +L SR
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Query: 543 -----KYTNVVEVFEKMREVGYFPD 562
Y+ V+ + ++M E G D
Sbjct: 850 IAEAYIYSGVMTICKEMVEAGLIVD 874
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 162/326 (49%), Gaps = 5/326 (1%)
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVF 310
++I YN + VF K+K ++ L EM + G+ PD +++T+++ N A+ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 311 SEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES 370
+M+ C D T MID YG+ V+ L+ R + V+++TL+R+YG S
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 371 ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
+ ++++ M+ GV+ N+V YN +I+ G++ +A + +++ NG PN TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+ ++ + +A D A ++++++ G+ + +LY T++ V A + ++K
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 491 -----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
PD+ + I V A + RV EA Q AG + V +I Y + K+
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLN 571
+VV F+++ E+G PD +LN
Sbjct: 474 DVVRTFDQVLELGITPDDRFCGCLLN 499
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 195/446 (43%), Gaps = 68/446 (15%)
Query: 96 NEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLR 155
NE ++ V++ + + +V+L + T+ + A +L+ + E S V YNV ++
Sbjct: 125 NEADVCDVITGFGGKLFEQDAVVTL-NNMTNPETAPLVLNNLLETMKPSREVILYNVTMK 183
Query: 156 NVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG 215
++K + LFDEM +RG+ PD T++T+
Sbjct: 184 VFRKSKDLEKSEKLFDEMLERGIKPDNATFTTI--------------------------- 216
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
I +R+ G +A+ F ++ + PD + +MI+ +G+A A L
Sbjct: 217 --------ISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLY 268
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
R D V++STL+ IY + + L+++ EM +L N +ID G+
Sbjct: 269 DRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
+ ++ + G PN +Y L+R YG + +A+ ++R M++KG+ V+ Y
Sbjct: 329 KRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILY 388
Query: 396 NTMINIYGKSLEHEKATNLIQEMQN-NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
NT++++ + ++A + Q+M+N P++ T+S++I+++ +G++ A ++R
Sbjct: 389 NTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATW 514
+G + + ++I Y +A++V++
Sbjct: 449 EAGFEPTLFVLTSVIQCY-------------------------------GKAKQVDDVVR 477
Query: 515 VFRQAFAAGEVNDISVFGCMINLYSR 540
F Q G D GC++N+ ++
Sbjct: 478 TFDQVLELGITPDDRFCGCLLNVMTQ 503
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L L++ + V+ YN + ++ KS + EK+ L EM GI+P+ T++TIIS
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNI 494
+ G RA F+K+ S G + D V MI AY RAG V A R E R D +
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
T I + + + ++ + A G ++ ++ +I+ R K+ +++ +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
G+ P+ + A ++ A+G+ R + A A+Y ++ ++G
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 175/373 (46%), Gaps = 17/373 (4%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P Y+ VL + A + LA LF+EM++ GL D YTY+ ++ F K GL++ +
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
W +M + + ++V Y+ LI K S A +F + + P+++ Y+++I+
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 263 GKAKLFREARLLLQEM----------------RDNGVCPDTVSYSTLLAIYVDNERFVEA 306
KA +A + + M DN P+ V+Y LL + + R EA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ M+ C + + +ID ++ ++E + M + G + +Y++L+
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
Y + + A + M + NVV Y MI+ K + ++A L+Q M+ G QPN
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
+TY+ +I + GK++ L +++ S GV + V Y+ +I + G + A LL
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 487 ELKRPDNIPRETA 499
E+K+ + P TA
Sbjct: 839 EMKQT-HWPTHTA 850
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/569 (20%), Positives = 234/569 (41%), Gaps = 68/569 (11%)
Query: 100 LHAVMSLYNQRQ--LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNV 157
+H MSL N R ++R L + W+ AL L++ N + P Y ++ +
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETEN----FVPDTVFYTKLISGL 312
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
A + A + MR P+ TYSTL+ L L M +
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN----------------- 260
++++L+ GD+S A + ++ P + YN +I
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 261 ------------------------VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
A + +A +++EM G PDT +YS +L
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ + A +F EM D+ T IM+D + + ++E+ + F MR++G PN
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
VV+Y L+ Y +++ A LF M +G N+VTY+ +I+ + K+ + EKA + +
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 417 EM----------------QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
M +N +PN +TY ++ + K+ +++ A L + G +
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 461 DQVLYQTMIVAYERAGLVAHAKRLLHELKR---PDNIPRETAIM-VLARARRVEEATWVF 516
+Q++Y +I + G + A+ + E+ P + ++++ + +R + A+ V
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
+ ++ ++ MI+ + K ++ + M E G P+ +++ FG +
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQML 605
+ E L ++ +G V P+ V +++L
Sbjct: 793 GKIETCLELLERMGSKG-VAPNYVTYRVL 820
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 224/517 (43%), Gaps = 35/517 (6%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFA--YNVVLRNVLRAKQWHLAHGLFDEMR 174
+V L+ R+ D + L I + VF NV++R R + +A ++
Sbjct: 171 LVDLIVRDDDEKVPEEFLQQIRDD---DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
P R TY+ LI F K LDS+ ++M N+ D K+G +
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A+++ ++ + PD + Y +I+ +A LF EA L MR P+ V+YSTLL
Sbjct: 288 EALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
++ ++ V + M C N ++ Y +L M K G
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 355 PNVVSYNTLL-RVYGE-----SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
P V YN L+ + G+ +L A + M GV N + ++ + ++
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
EKA ++I+EM G P+ TYS +++ A K++ A +LF++++ G+ D Y M
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 469 IVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
+ ++ +AGL+ A++ +E++ P+ + I +A++V A +F + G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD--------------SNVI--AL 568
+ +I + +I+ + + + ++FE+M PD NV+
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+L+ F K E+A L + EGC P+++ + L
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCE-PNQIVYDAL 680
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 207/501 (41%), Gaps = 65/501 (12%)
Query: 204 WLQQMEQDN--VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
+LQQ+ D+ V G+ + + L+ + G +S A+ RLK P YN +I
Sbjct: 187 FLQQIRDDDKEVFGEFL--NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 244
Query: 262 FGKAKLFREARLLLQEM-----RDNGVCPDTVSYSTLLA-------IYVDNERFVEALSV 309
F KA A L+ +EM R +G +YS V+ E FV
Sbjct: 245 FLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVF 304
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
++++ C + + EE MR PNVV+Y+TLL
Sbjct: 305 YTKLISGLC---------------EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ G + +M +G + +N++++ Y S +H A L+++M G P +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 430 YSTII-SIWEKAGK-----LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
Y+ +I SI LD A + ++ ++GV ++++ + AG A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 484 LLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYS 539
++ E+ PD + L A ++E A +F + G V D+ + M++ +
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 540 RNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE 599
+ + F +MREVG P+ +++A+ K ++ A+ L+ + EGC+ P+
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNI 588
Query: 600 VHF-----------------QMLSLYGARKDFTMVESLFEKLDSN---PNINKKELHLVV 639
V + Q+ KD V+ F++ D N PN+ ++
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV--VTYGALL 646
Query: 640 SGIYERADRLNDASRIMNRMN 660
G + ++ R+ +A ++++ M+
Sbjct: 647 DG-FCKSHRVEEARKLLDAMS 666
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ +++ Y+ ++ + K+ LA + +M + AP+ Y+ +I K G D +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+Q ME+ ++V Y+ +I+ +G + + R+ + +AP+ + Y +I+
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K A LL+EM+ T Y ++ + N+ F+E+L + E+ L
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 882
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMG--IEPNVVSYNTLLRVYGESELFGEAIHLF 380
+ ++ID + +E RL + + +YN+L+ + A LF
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 381 RLMQKKGVQQNVVTYNTMI 399
M KKGV + ++ ++I
Sbjct: 943 SEMTKKGVIPEMQSFCSLI 961
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 4/248 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+P+V Y ++ + + + A+ L M ++G P+ TY+ +I FG G +++ L
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
L++M V+ + V Y LI+ K G A ++ +K + Y +I F
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL-DL 322
K F E+ LL E+ + P Y L+ + +R AL + E+ L D
Sbjct: 861 KE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 323 T-TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ T N +I+ + VE +LF M K G+ P + S+ +L++ + EA+ L
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 382 LMQKKGVQ 389
+ +Q
Sbjct: 979 FISHMEIQ 986
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 17/378 (4%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+R L++L K +P+V +Y ++ + R + + A +F M+ G P TY
Sbjct: 159 ERVLSVLS----KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 214
Query: 188 LITHF---GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
++ F K + L ++ + D +Y +I + +K G+Y KA +F+ +
Sbjct: 215 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 274
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
+ + YNS+++ ++E + +M+ + + PD VSY+ L+ Y R
Sbjct: 275 GKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
EALSVF EM DA NI++D + MVE+ +F SMR+ I P++ SY T+L
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y + A F+ ++ G + N+VTY T+I Y K+ + EK + ++M+ +GI+
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
N +TI+ + A ++++ S GV DQ ++ +A +
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS-------LASTQDE 504
Query: 485 LHELKRPDNIPRETAIMV 502
L E K I ETA ++
Sbjct: 505 LEEAKELTGIRNETATII 522
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 194/410 (47%), Gaps = 42/410 (10%)
Query: 194 KHGLLDSSLFWLQQMEQDNVSG-DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
K L+ L WL+ N S D ++ LI KLG+++ A + + L P++
Sbjct: 118 KWNLVSEILEWLRYQNWWNFSEIDFLM---LITAYGKLGNFNGAERVLSVLSKMGSTPNV 174
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
I+Y +++ +G+ A + + M+ +G P ++Y +L +V+ ++F EA VF
Sbjct: 175 ISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFET 234
Query: 313 -MNDAKCPL--DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+++ K PL D ++MI +Y + E+ ++F SM G+ + V+YN+L+
Sbjct: 235 LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--- 291
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ E ++ MQ+ +Q +VV+Y +I YG++ E+A ++ +EM + G++P
Sbjct: 292 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Y+ ++ + +G +++A +F+ +R + D Y TM+ AY A + A++ +K
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
P +I +G +I Y++ ++E
Sbjct: 412 VDGFEP-------------------------------NIVTYGTLIKGYAKANDVEKMME 440
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE 599
V+EKMR G + ++ +++A G+ + F A Y ++ G V PD+
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG-VPPDQ 489
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 210/479 (43%), Gaps = 51/479 (10%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAY----------NVVLRNVLRAKQ---WHLAHGLF 170
ETD +R L+ I P + Y ++VL ++R KQ W+L +
Sbjct: 67 ETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEIL 126
Query: 171 DEMR-QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
+ +R Q + LIT +GK G + + L + + + +++ Y+ L+E +
Sbjct: 127 EWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 186
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD---NGVCPD 286
G + A +IF R+++S P I Y ++ F + F+EA + + + D + + PD
Sbjct: 187 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
Y ++ +Y + +A VFS M P T N ++ V +++
Sbjct: 247 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYD 303
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M++ I+P+VVSY L++ YG + EA+ +F M GV+ YN +++ + S
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E+A + + M+ + I P+ +Y+T++S + A ++ A F++++ G + + V Y
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
T+I Y A+A VE+ V+ + +G
Sbjct: 424 TLIKGY-------------------------------AKANDVEKMMEVYEKMRLSGIKA 452
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
+ ++ +++ R K + + + +++M G PD ++L+ E E+A L
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 12/306 (3%)
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++I YG+L +R+ + KMG PNV+SY L+ YG A +FR MQ
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 387 GVQQNVVTYNTMINIY---GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
G + + +TY ++ + K E E+ + + + + ++P+ Y +I +++KAG
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETA 499
++A +F + GV V Y +++ ++E + ++ +++R PD +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I RARR EEA VF + AG + +++ ++ + VF+ MR
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVE 618
FPD +L+A+ + E A+ + +I +G P+ V + ++ Y D +
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE-PNIVTYGTLIKGYAKANDVEKMM 439
Query: 619 SLFEKL 624
++EK+
Sbjct: 440 EVYEKM 445
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 11/282 (3%)
Query: 358 VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQE 417
+ + L+ YG+ F A + ++ K G NV++Y ++ YG+ + A + +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 418 MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL---RSSGVQIDQVLYQTMIVAYER 474
MQ++G +P+AITY I+ + + K A +F+ L + S ++ DQ +Y MI Y++
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIM--VLARARRVEEATWVFRQAFAAGEVNDISVFG 532
AG A+++ + +P+ T +++ +E + ++ Q + D+ +
Sbjct: 260 AGNYEKARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
+I Y R ++ + VFE+M + G P ++L+AF E+A ++ + +
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 593 GCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSN---PNI 630
+FPD + MLS Y D E F+++ + PNI
Sbjct: 379 -RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 17/378 (4%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+R L++L K +P+V +Y ++ + R + + A +F M+ G P TY
Sbjct: 166 ERVLSVLS----KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 221
Query: 188 LITHF---GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
++ F K + L ++ + D +Y +I + +K G+Y KA +F+ +
Sbjct: 222 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
+ + YNS+++ ++E + +M+ + + PD VSY+ L+ Y R
Sbjct: 282 GKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
EALSVF EM DA NI++D + MVE+ +F SMR+ I P++ SY T+L
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y + A F+ ++ G + N+VTY T+I Y K+ + EK + ++M+ +GI+
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
N +TI+ + A ++++ S GV DQ ++ +A +
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS-------LASTQDE 511
Query: 485 LHELKRPDNIPRETAIMV 502
L E K I ETA ++
Sbjct: 512 LEEAKELTGIRNETATII 529
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 198/426 (46%), Gaps = 44/426 (10%)
Query: 180 PDRYTYSTLI--THFGKHGLLDSSLFWLQQMEQDNVSG-DLVLYSNLIELSRKLGDYSKA 236
P TL+ K L+ L WL+ N S D ++ LI KLG+++ A
Sbjct: 109 PRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLM---LITAYGKLGNFNGA 165
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + L P++I+Y +++ +G+ A + + M+ +G P ++Y +L
Sbjct: 166 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 225
Query: 297 YVDNERFVEALSVFSE-MNDAKCPL--DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+V+ ++F EA VF +++ K PL D ++MI +Y + E+ ++F SM G+
Sbjct: 226 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+ V+YN+L+ + E ++ MQ+ +Q +VV+Y +I YG++ E+A +
Sbjct: 286 PQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
+ +EM + G++P Y+ ++ + +G +++A +F+ +R + D Y TM+ AY
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYV 402
Query: 474 RAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGC 533
A + A++ +K P +I +G
Sbjct: 403 NASDMEGAEKFFKRIKVDGFEP-------------------------------NIVTYGT 431
Query: 534 MINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+I Y++ ++EV+EKMR G + ++ +++A G+ + F A Y ++ G
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 594 CVFPDE 599
V PD+
Sbjct: 492 -VPPDQ 496
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 210/479 (43%), Gaps = 51/479 (10%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAY----------NVVLRNVLRAKQ---WHLAHGLF 170
ETD +R L+ I P + Y ++VL ++R KQ W+L +
Sbjct: 74 ETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEIL 133
Query: 171 DEMR-QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
+ +R Q + LIT +GK G + + L + + + +++ Y+ L+E +
Sbjct: 134 EWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 193
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD---NGVCPD 286
G + A +IF R+++S P I Y ++ F + F+EA + + + D + + PD
Sbjct: 194 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 253
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
Y ++ +Y + +A VFS M P T N ++ V +++
Sbjct: 254 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYD 310
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M++ I+P+VVSY L++ YG + EA+ +F M GV+ YN +++ + S
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E+A + + M+ + I P+ +Y+T++S + A ++ A F++++ G + + V Y
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
T+I Y A+A VE+ V+ + +G
Sbjct: 431 TLIKGY-------------------------------AKANDVEKMMEVYEKMRLSGIKA 459
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
+ ++ +++ R K + + + +++M G PD ++L+ E E+A L
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 12/306 (3%)
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++I YG+L +R+ + KMG PNV+SY L+ YG A +FR MQ
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 387 GVQQNVVTYNTMINIY---GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
G + + +TY ++ + K E E+ + + + + ++P+ Y +I +++KAG
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETA 499
++A +F + GV V Y +++ ++E + ++ +++R PD +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I RARR EEA VF + AG + +++ ++ + VF+ MR
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVE 618
FPD +L+A+ + E A+ + +I +G P+ V + ++ Y D +
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG-FEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 619 SLFEKL 624
++EK+
Sbjct: 447 EVYEKM 452
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 11/282 (3%)
Query: 358 VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQE 417
+ + L+ YG+ F A + ++ K G NV++Y ++ YG+ + A + +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 418 MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL---RSSGVQIDQVLYQTMIVAYER 474
MQ++G +P+AITY I+ + + K A +F+ L + S ++ DQ +Y MI Y++
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIM--VLARARRVEEATWVFRQAFAAGEVNDISVFG 532
AG A+++ + +P+ T +++ +E + ++ Q + D+ +
Sbjct: 267 AGNYEKARKVFSSMV-GKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
+I Y R ++ + VFE+M + G P ++L+AF E+A ++ + +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 593 GCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSN---PNI 630
+FPD + MLS Y D E F+++ + PNI
Sbjct: 386 R-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 199/435 (45%), Gaps = 8/435 (1%)
Query: 136 WINEKALYS----PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITH 191
W++ + + S P V Y V+ + + + L DEM G+ P+ Y Y+ I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 192 FGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPD 251
+ ++ + + M++ V +L YS +I+ K G+ +A ++ + + + P+
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS 311
++ + ++++ F KA+ AR L M GV P+ Y+ L+ + + +EA+ + S
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 312 EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
EM D+ T I+I+ V E +RLF M+ I P+ +YN+L+ Y +
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 372 LFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYS 431
+A+ L M GV+ N++T++T+I+ Y + + A L EM GI P+ +TY+
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 491
+I K + A L+ + +G+ + + ++ + + G ++ A E +
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 492 ----DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
+++ I L + + A+ F + G DI + M+ + + K+ T+
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 548 VEVFEKMREVGYFPD 562
+ + M + G P+
Sbjct: 604 MMLQCDMIKTGILPN 618
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 198/458 (43%), Gaps = 8/458 (1%)
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
W++ + SP A +L ++R +++ + M RGL PD + Y L K
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYS-NLIELSRKLGDYSKAISIFARLKASSIAPDLIA 254
GL L +M + ++ +Y+ +++L R +A +F +K + P+L
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD-NKMEEAEKMFELMKKHGVLPNLYT 271
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
Y++MI+ + K R+A L +E+ + P+ V + TL+ + V A S+F M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+L N +I + + + E L M + + P+V +Y L+ +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
EA LF+ M+ + + + TYN++I+ Y K E+A +L EM +G++PN IT+ST+I
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+ + A L+ ++ G+ D V Y +I A+ + + A RL ++
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 495 PRETAIMVLA----RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P + L + R+ A +++ + F C+I +N
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
F MR G PD + + V G L+E D + Q
Sbjct: 572 FSDMRSCGITPD--ICSYVSMLKGHLQEKRITDTMMLQ 607
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 179/385 (46%), Gaps = 1/385 (0%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L R+ + A + + + + + P+++ Y+ ++ + A+GL+ E+ L P
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVL-PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
+ + TL+ F K L ++ M + V +L +Y+ LI K G+ +A+ +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
+ +++ +++PD+ Y +IN EA L Q+M++ + P + +Y++L+ Y
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
+AL + SEM + ++ T + +ID Y + ++ L++ M GI P+VV+Y
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
L+ + + EA+ L+ M + G+ N T+ +++ + K A + QE
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAH 480
N + ++ +I + G + RA+ F +RS G+ D Y +M+ + + +
Sbjct: 543 QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITD 602
Query: 481 AKRLLHELKRPDNIPRETAIMVLAR 505
L ++ + +P +LAR
Sbjct: 603 TMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 180/417 (43%), Gaps = 39/417 (9%)
Query: 165 LAHGLFDEM----RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLY 220
L GLF+E R+ +PD +++ + DS Q M + D+ +Y
Sbjct: 143 LEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD 280
L + K G YSK + + + I P++ Y I + EA + + M+
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262
Query: 281 NGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEE 340
+GV P+ +YS ++ Y +A ++ E+ A+ ++ ++D + + +
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 341 GDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN 400
LF M K G++PN+ YN L+ + +S EA+ L M+ + +V TY +IN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 401 IYGKSLEHE--KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
G +E + +A L Q+M+N I P++ TY+++I + K +++A L ++ +SGV
Sbjct: 383 --GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 459 QIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQ 518
+ + + + T+I Y R ++ A ++ +
Sbjct: 441 EPNIITFSTLIDGY-------------------------------CNVRDIKAAMGLYFE 469
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
G V D+ + +I+ + + + ++ M E G P+ + A +++ F K
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 120/259 (46%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
SP VF Y +++ + Q A+ LF +M+ + P TY++LI + K ++ +L
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+M V +++ +S LI+ + D A+ ++ + I PD++ Y ++I+
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K +EA L +M + G+ P+ +++ L+ + R A+ + E N + +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+I+ Q + R F MR GI P++ SY ++L+ + + + + + L M
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Query: 384 QKKGVQQNVVTYNTMINIY 402
K G+ N++ + Y
Sbjct: 611 IKTGILPNLLVNQLLARFY 629
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%), Gaps = 8/391 (2%)
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
++S LI ++G + +A+ + +K S PD A S++N + + F + Q M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
G+ PD Y L + + + EM ++ I I + + +
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTM 398
EE +++F M+K G+ PN+ +Y+ ++ Y ++ +A L++ + + NVV + T+
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 399 INIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
++ + K+ E A +L M G+ PN Y+ +I K+G + A L ++ S +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 459 QIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATW 514
D Y +I VA A RL ++K P + + I + +E+A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 515 VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFG 574
+ + A+G +I F +I+ Y + + ++ +M G PD +++A
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 575 KLREFEKADALYSQIHDEGCVFPDEVHFQML 605
K ++A LYS + + G + P++ F L
Sbjct: 491 KEANMKEALRLYSDMLEAG-IHPNDHTFACL 520
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 139/317 (43%), Gaps = 10/317 (3%)
Query: 309 VFSEMNDAKCP-LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
+F+ + D + P + +++I + ++ + EE W R+M P+ + ++L
Sbjct: 118 LFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGL 174
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
F ++LM +G+ +V Y + K + K L+ EM + GI+PN
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNV 234
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
Y+ I + K++ A +F+ ++ GV + Y MI Y + G V A L E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 488 LKRPDNIPRETAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + +P L +AR + A +F G ++ V+ C+I+ + ++
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ 603
V + +M + PD +++N + +A+ L+ ++ +E +FP +
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER-IFPSSATYN 413
Query: 604 MLSLYGARKDFTMVESL 620
L ++G K++ M ++L
Sbjct: 414 SL-IHGYCKEYNMEQAL 429
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V Y ++ + A L+ +M + G+ P+ +T++ L+ F K G L ++ +
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
Q+ Q + V ++ LIE + G +A F+ +++ I PD+ +Y SM+ +
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
K + +L +M G+ P+ + L Y N
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQAN 632
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 216/466 (46%), Gaps = 10/466 (2%)
Query: 142 LYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
L + S +++++R + + A F M+++G P T + ++T + ++++
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
+ M + + ++ ++ +I + K G KA ++ I P ++ YN+++
Sbjct: 210 WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
F ARL++ EM+ G PD +Y+ +L+ + R A V EM + D
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPD 326
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR-VYGESELFGEAIHLF 380
+ NI+I +E M K G+ P +YNTL+ ++ E+++ I L
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI-LI 385
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
R +++KG+ + VTYN +IN Y + + +KA L EM +GIQP TY+++I + +
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
K A LF+K+ G++ D V+ T++ + G + A LL E+ PD++
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ L + EEA + + G D + +I+ YS+ + V ++M
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF 602
+G+ P +L K +E E A+ L ++ EG V P++ F
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV-PNDSSF 610
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 198/433 (45%), Gaps = 20/433 (4%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALY----SPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
+++LLSR + A W+ +Y +V+ +N+++ + + + A G
Sbjct: 196 ILTLLSRLNRIENA-----WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGI 250
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M G+ P TY+TL+ F G ++ + + +M+ D+ Y+ ++ + +
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW---MCN 307
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+A + +K + PD ++YN +I A EM G+ P +Y+T
Sbjct: 308 EGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 293 LL-AIYVDNERFVEALSVF-SEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
L+ ++++N+ +EA + E+ + LD T NI+I+ Y Q ++ L M
Sbjct: 368 LIHGLFMENK--IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
GI+P +Y +L+ V EA LF + KG++ ++V NT+++ + ++
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A +L++EM I P+ +TY+ ++ GK + A L +++ G++ D + Y T+I
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 471 AYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
Y + G HA + E+ P + + L++ + E A + R+ + G V
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 527 DISVFGCMINLYS 539
+ S F +I S
Sbjct: 606 NDSSFCSVIEAMS 618
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 33/353 (9%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
++++ QL MV+E F+ M++ G P + N +L + A + M +
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
++ NV T+N MIN+ K + +KA + M+ GI+P +TY+T++ + G+++
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
A ++ +++S G Q D Y ++ G A +L E+K +P + +L R
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIR 335
Query: 506 ARRVE---EATWVFR-QAFAAGEVNDISVFGCMIN-LYSRNKKYTNVVEVFEKMREVGYF 560
E + +R + G V + +I+ L+ NK + + E +RE G
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE-IREKGIV 394
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM-VES 619
DS +++N + + + +KA AL+ ++ +G + P + + L RK+ T +
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDG-IQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 620 LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRM--NHKAIGNHDHA 670
LFEK V G + D + +MN + H AIGN D A
Sbjct: 454 LFEK---------------VVGKGMKPDLV-----MMNTLMDGHCAIGNMDRA 486
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 8/305 (2%)
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
EA+ F M + TCN ++ + +L+ +E + M +M I+ NV ++N ++
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
V + +A +M+ G++ +VTYNT++ + E A +I EM++ G Q
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P+ TY+ I+S G RA+ + ++++ G+ D V Y +I G + A
Sbjct: 293 PDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 485 LHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSR 540
E+ + +P T I L ++E A + R+ G V D + +IN Y +
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 541 NKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV 600
+ + ++M G P ++ + + +AD L+ ++ +G + PD V
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG-MKPDLV 468
Query: 601 HFQML 605
L
Sbjct: 469 MMNTL 473
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 182/387 (47%), Gaps = 1/387 (0%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
S ++ R + AL++L + K Y PS+ + +L + A L
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M + G P+ Y+TLI K+G L+ +L L +ME+ + D+V Y+ L+ G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+S A + + SI PD++ + ++I+VF K EA+ L +EM + V P+ V+Y++
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + R +A F M C ++ T N +I + + MV+EG +LF M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
++ +YNTL+ Y + A+ +F M + V +++T+ +++ + E E A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+M+ + + Y+ +I KA K+++A LF +L GV+ D Y MI+
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRETA 499
+ G A L+ +K I + A
Sbjct: 467 CKNGPRREADELIRRMKEEGIICQMNA 493
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 196/445 (44%), Gaps = 10/445 (2%)
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
L + ++ A LF EM P ++ L+T ++ +++ Q+ME +S DL
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL 106
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
++ LI + S A+S+ ++ P ++ + S+++ F +A L+
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
M +G P+ V Y+TL+ N AL + +EM D+ T N ++
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ R+ M K I P+VV++ L+ V+ + EA L++ M + V N VTYN+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 398 MIN---IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
+IN ++G+ + +K +L M + G PN +TY+T+IS + K +D LFQ++
Sbjct: 287 IINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVE 510
G D Y T+I Y + G + A + + PD I + L +E
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
A F + + I + MI+ + K E+F ++ G PD+ +++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 571 NAFGKLREFEKADALYSQIHDEGCV 595
K +AD L ++ +EG +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 190/427 (44%), Gaps = 10/427 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ + +L +++ +M G++ D Y+++ LI F + L +L
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 205 LQQMEQDNVSGDLVLYSNLIE---LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
L +M + +V + +L+ L ++GD A S+ + S P+++ YN++I+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
K A LL EM G+ D V+Y+TLL + R+ +A + +M D
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ T +IDV+ + ++E L+ M + ++PN V+YN+++ +A F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
LM KG NVVTYNT+I+ + K ++ L Q M G + TY+T+I + + G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 442 KLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN----IPRE 497
KL A +F + S V D + + ++ G + A +++ + +
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
I L +A +VE+A +F + G D + MI +N E+ +M+E
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 558 GYFPDSN 564
G N
Sbjct: 486 GIICQMN 492
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 3/379 (0%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWI---NEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
S +++++ E + R L D++ N SP+ ++N+V++ + + + A +
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
F M +R PD YTY TL+ K +D ++ L +M+ + S V+Y+ LI+ K
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
GD ++ + + P+ + YN++I+ +A LL+ M + P+ V+
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y TL+ V R +A+ + S M + L+ +++I + EE L+ M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ G +PN+V Y+ L+ EA + M G N TY++++ + K+ E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+A + +EM G N YS +I G++ A M++ K+ + G++ D V Y ++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 470 VAYERAGLVAHAKRLLHEL 488
G + A +L HE+
Sbjct: 510 KGLCGIGSMDAALKLYHEM 528
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 240/531 (45%), Gaps = 21/531 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P F N + ++ + L+ + RG P R +++++++ K G + +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS---IAPDLIAYNSMINV 261
+ M + D++ Y++LI+ + GD A + L+AS PD++++NS+ N
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN-DAKCPL 320
F K K+ E + + M P+ V+YST + + + AL F M DA P
Sbjct: 139 FSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP- 196
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
++ T +ID Y + +E L+ MR++ + NVV+Y L+ + + A ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M + V+ N + Y T+I+ + + + + A + +M N G++ + Y IIS
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
GKL A + + + S + D V++ TM+ AY ++G + A + H+L PD +
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
T I +A+ ++ EA F + ND+ ++ +I+ + + V +F K+ E
Sbjct: 377 STMIDGIAKNGQLHEAIVY----FCIEKANDV-MYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM 616
G PD + + K A L +++ EG + D + + L +YG M
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG-LLLDLLAYTTL-IYGLASKGLM 489
Query: 617 VES---LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
VE+ E L+S + + L++ YE+ + AS ++ M + +
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRA-YEKEGNMAAASDLLLDMQRRGL 539
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/524 (19%), Positives = 229/524 (43%), Gaps = 62/524 (11%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
LS++F+ L+SR Y+P ++N V+ V + Q A +
Sbjct: 39 LSLKFLAYLVSRG------------------YTPHRSSFNSVVSFVCKLGQVKFAEDIVH 80
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
M + G PD +Y++LI ++G + S+ L+ + S + +++ +
Sbjct: 81 SMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR---ASHGFICKPDIVSFNSLFN 137
Query: 232 DYSK-----AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+SK + ++ + +P+++ Y++ I+ F K+ + A M+ + + P+
Sbjct: 138 GFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPN 197
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+++ L+ Y A+S++ EM + L++ T +ID + + ++ + ++
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M + +EPN + Y T++ + + A+ M +G++ ++ Y +I+ +
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ ++AT ++++M+ + + P+ + ++T+++ + K+G++ A ++ KL G + D V
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
TMI + G + H + +++ +++ I L + E +F + AG V
Sbjct: 378 TMIDGIAKNGQL-HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 527 DISVF----------GCMINLYSRNKK------------YTNVV-------------EVF 551
D ++ G +++ + + YT ++ +VF
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCV 595
++M G PDS V L++ A+ K A L + G V
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 228/540 (42%), Gaps = 67/540 (12%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
+ ++ L + A L D + EK P+ F + +++R +A L +
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGC-KPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M G+ P++ Y+T+++ F + G D S +++M ++ + D+V +++ I K G
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 233 YSKAISIFARLKASSIA----PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
A IF+ ++ P+ I YN M+ F K L +A+ L + +R+N
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
SY+ L V + +F+EA +V +M D + + NI++D +L M+ + + M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 349 RKMGIEPNVVSYNTLLRVY---GESEL--------------------------------F 373
++ G+ P+ V+Y LL Y G+ +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ-------------- 419
EA L R M +KG + VT N +++ S E +KA +++ M+
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 420 ---------NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
N P+ ITYST+++ KAG+ A LF ++ +Q D V Y I
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 471 AYERAGLVAHAKRLLHEL-KRPDNIPRET---AIMVLARARRVEEATWVFRQAFAAGEVN 526
+ + G ++ A R+L ++ K+ + ET I+ L ++ E + + G
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+I + I +K + + ++M + P+ ++ AF K+ +F+ A ++
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/561 (19%), Positives = 254/561 (45%), Gaps = 29/561 (5%)
Query: 57 VWTRTTPSPYHRRTRTQQQMFLDHSIDMDELLASISSTQNEQELHAVM---SLYNQRQLS 113
++ R SP + + LD + + +L + QELH ++ S+ + S
Sbjct: 22 IFKRIFSSP----SEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSS 77
Query: 114 IRFMVSLLSRETDWQRALALLDWINEK-ALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
+ +VS+ ++ +A + + PSV+ YN++L + ++ ++ L+ +
Sbjct: 78 LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M G+AP YT++ LI +D++ +M + + + L+ K G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
K + + +++ + P+ + YN++++ F + ++ ++++MR+ G+ PD V++++
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 293 LLAIYVDNERFVEALSVFSEMN-DAKCPL---DLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
++ + ++A +FS+M D L + T N+M+ + ++ ++E+ LF S+
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
R+ ++ SYN L+ F EA + + M KG+ ++ +YN +++ K
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A ++ M+ NG+ P+A+TY ++ + GK+D A L Q++ + + +
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 469 IVAYERAGLVAHAKRLLHELKRP----DNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
+ + + G ++ A+ LL ++ D + + L + +++A + + G
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADA 584
+ G + N Y + V + + E PD + +LN K F +A
Sbjct: 498 ----AALGNLGNSY--------IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 585 LYSQIHDEGCVFPDEVHFQML 605
L++++ E + PD V + +
Sbjct: 546 LFAEMMGEK-LQPDSVAYNIF 565
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 25/389 (6%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L R + A +L + +K + PS+++YN+++ + + A + M++ G+ P
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGI-GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
D TY L+ + G +D++ LQ+M ++N + + L+ K+G S+A +
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR--------------------- 279
++ D + N +++ + +A +++ MR
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 280 --DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
+N PD ++YSTLL RF EA ++F+EM K D NI I + +
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ R+ M K G ++ +YN+L+ G E L M++KG+ N+ TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
I + + E ATNL+ EM I PN ++ +I + K D A +F+ S
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
Q + LY M AG + A LL
Sbjct: 695 GQ-KEGLYSLMFNELLAAGQLLKATELLE 722
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 151/332 (45%), Gaps = 12/332 (3%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
L+ M GI P ++N L+R +S A LF M +KG + N T+ ++ Y
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
K+ +K L+ M++ G+ PN + Y+TI+S + + G+ D + + +K+R G+ D V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 464 LYQTMIVAYERAGLVAHAKRLLHE--------LKRPDNIPRETAIMVLARARRVEEATWV 515
+ + I A + G V A R+ + L RP++I + + +E+A +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
F ++ + + + R+ K+ V ++M + G P ++++ K
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 576 LREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNI-NKK 633
L A + + G V PD V + +L Y + +SL +++ N + N
Sbjct: 374 LGMLSDAKTIVGLMKRNG-VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 634 ELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
++++ ++ + R+++A ++ +MN K G
Sbjct: 433 TCNILLHSLW-KMGRISEAEELLRKMNEKGYG 463
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
EK S+ YN ++ + Q HGL DEM+++G++P+ TY+T I + + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIA-YNS 257
+ + L +M Q N++ ++ + LIE K+ D+ A +F A SI Y+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE--TAVSICGQKEGLYSL 703
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
M N A +A LL+ + D G T Y L+ + A + +M D
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
D +ID G++ +E + M +M
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINE--KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMR 174
MV +LS+ + L++ + + L P +F V++R A A + DEM
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEMP 194
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ GL PD Y + L+ K+G + + + M ++ +L +++L+ + G
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLM 253
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A + ++K + + PD++ + ++++ + A +A L+ +MR G P+ Y+ L+
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 295 -AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
A+ +R EA+ VF EM C D+ T +I + + M+++G + MRK G+
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
P+ V+Y ++ + + E F E + L M+++G +++ YN +I + K E ++A
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
L EM+ NG+ P T+ +I+ + G L A F+++ S G+
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 10/372 (2%)
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
R+ G I + I P+L ++ F A + ++A +L EM G+ PD
Sbjct: 145 RQFGAVWGLIEEMRKTNPELIEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDE 202
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
+ LL N EA VF +M + K P +L ++ + + + E +
Sbjct: 203 YVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
M++ G+EP++V + LL Y + +A L M+K+G + NV Y +I ++ +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 408 H-EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
++A + EM+ G + + +TY+ +IS + K G +D+ + +R GV QV Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 467 TMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
++VA+E+ L+ ++KR PD + I + + V+EA ++ + A
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF--PDSNVIALVLNAFGKLREFE 580
G + F MIN ++ F++M G F P + +LN + + E
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 581 KADALYSQIHDE 592
A ++S I ++
Sbjct: 502 MAKDVWSCISNK 513
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 147/342 (42%), Gaps = 38/342 (11%)
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS---YSTLLAIYVDNERFVEALSVFSE 312
SM+ + K + F L++EMR P+ + + L+ + +A+ V E
Sbjct: 135 KSMVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
M D ++D + V+E ++F MR+ PN+ + +LL +
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGK 251
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
EA + M++ G++ ++V + +++ Y + + A +L+ +M+ G +PN Y+
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 433 II-SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 491
+I ++ ++D A +F ++ G + D V Y +I + + G++ +L ++++
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+P + M + A + + +++ +E+
Sbjct: 372 GVMPSQVTYMQIMVA-------------------------------HEKKEQFEECLELI 400
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
EKM+ G PD + +V+ KL E ++A L++++ G
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 131/283 (46%), Gaps = 12/283 (4%)
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMG---IEPNVVSYNTLLRVYGESELFGEAIHLF 380
C M+ + ++ L MRK IEP + + L+R + + + +A+ +
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVL 190
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M K G++ + + +++ K+ ++A+ + ++M+ PN +++++ W +
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCRE 249
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
GKL A + +++ +G++ D V++ ++ Y AG +A A L++++++ P
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 501 MVLARA-----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
VL +A +R++EA VF + G DI + +I+ + + V + MR
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
+ G P ++ A K +FE+ L ++ GC PD
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC-HPD 411
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 201/460 (43%), Gaps = 9/460 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS YN V+ ++++ LA+ F +MR G PDR+TY+ LI K G++D ++
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI-NVFG 263
++QMEQ+ ++ Y+ LI+ G +A+ ++ + P+ + + +F
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 264 KAKLFREARLLLQEM-RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ +L+ M +D+ + V Y +L +N E ++ + D
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNL--QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+T N + + H + E R+F G++P Y L++ ++ F E +
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M G+ +V +YN +I+ K+ E A + EMQ+ GI PN +T++T +S + G
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRET 498
+ + + +KL G + D + + +I RA + A K +L P+ I
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I + + +F + G D+ + I + + +K E+ + M +G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
PD+ + ++ A + +A ++S I GCV PD
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV-PD 634
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 16/243 (6%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ L + + A L + ++ + SP++ +N L HG+ +++
Sbjct: 431 VIDCLCKARRIENAAMFLTEMQDRGI-SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G PD T+S +I + + + ++M + + + + Y+ LI GD ++
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +FA++K + ++PDL AYN+ I F K + ++A LL+ M G+ PD +YSTL+
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
++ R EA +FS + C + D Y + +VEE D +RK G+
Sbjct: 610 LSESGRESEAREMFSSIERHGC---------VPDSYTK-RLVEELD-----LRKSGLSRE 654
Query: 357 VVS 359
VS
Sbjct: 655 TVS 657
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/575 (20%), Positives = 211/575 (36%), Gaps = 123/575 (21%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVL-----RAKQWHLA 166
L+ RF++S+L + + +L W++ + P V+A + L++VL R L+
Sbjct: 74 LNTRFVISVLQNQDNPLHSLRFYLWVSN---FDP-VYAKDQSLKSVLGNALFRKGPLLLS 129
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
L E+R G LI +G+ GL Y N
Sbjct: 130 MELLKEIRDSGYRISDELMCVLIGSWGRLGLAK--------------------YCN---- 165
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+FA++ + P YN++I+ K+ A L Q+MR +G PD
Sbjct: 166 -----------DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPD 214
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+Y+ L+ EA+ + +M ++ T I+ID + V+E +
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 347 SMRKMGIEPNV-----------------------------------VSYNTLLRVYGESE 371
MR + PN V Y+ +L +
Sbjct: 275 MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNS 334
Query: 372 LFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP------ 425
+ E R + ++G + T+N ++ K + + + + G++P
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394
Query: 426 -----------------------------NAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
+ +Y+ +I KA +++ AAM +++
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHA-----KRLLHELKRPDNIPRETAIMVLARARRVEE 511
G+ + V + T + Y G V K L+H K PD I I L RA+ +++
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK-PDVITFSLIINCLCRAKEIKD 513
Query: 512 ATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
A F++ G E N+I+ + +I V++F KM+E G PD +
Sbjct: 514 AFDCFKEMLEWGIEPNEIT-YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 571 NAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+F K+R+ +KA+ L + G + PD + L
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIG-LKPDNFTYSTL 606
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M + G PD T++TL+ G + +L + +M ++ Y +I K+GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
A+++ ++++ + I ++ YN++I+ K A+ L EM D G+ PD ++YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + + R+ +A + +M + + D+ T + +I+ + V E + ++ M + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I P ++YN+++ + + + +A + M K +VVT++T+IN Y K+ +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ EM GI N +TY+T+I + + G LD A L + SSGV + + +Q+M+ +
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 473 ERAGLVAHAKRLLHELKRPDN 493
+ A +L +L++ +
Sbjct: 297 CSKKELRKAFAILEDLQKSEG 317
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 132/305 (43%), Gaps = 36/305 (11%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ L + D + AL LL + E + + V YN ++ + + A LF EM +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKA-HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ PD TYS +I F + G + L+ M + ++ D+V +S LI K G S+A
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I+ + I P I YNSMI+ F K +A+ +L M PD V++STL+
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
Y +R V+ G +F M + GI N
Sbjct: 226 YCKAKR-----------------------------------VDNGMEIFCEMHRRGIVAN 250
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V+Y TL+ + + A L +M GV N +T+ +M+ E KA +++
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Query: 417 EMQNN 421
++Q +
Sbjct: 311 DLQKS 315
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 45/352 (12%)
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
M + G PD V+++TL+ R ++AL++ M
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM------------------------ 36
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
VEEG + + ++ N L ++ G++E A++L M++ ++ +VV YN
Sbjct: 37 VEEGHQPYGTI-----------INGLCKM-GDTE---SALNLLSKMEETHIKAHVVIYNA 81
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+I+ K H A NL EM + GI P+ ITYS +I + ++G+ A L + +
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEAT 513
+ D V + +I A + G V+ A+ + ++ R P I + I + R+ +A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 514 WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
+ + D+ F +IN Y + K+ N +E+F +M G ++ +++ F
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 574 GKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKL 624
++ + + A L + + G V P+ + FQ ML+ ++K+ ++ E L
Sbjct: 262 CQVGDLDAAQDLLNVMISSG-VAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ R W A LL + E+ + +P V ++ ++ +++ + A ++ +M +R
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQI-NPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ P TY+++I F K L+ + L M + S D+V +S LI K
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ IF + I + + Y ++I+ F + A+ LL M +GV P+ +++ ++LA
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 297 YVDNERFVEALSVFSEMNDAK 317
+ +A ++ ++ ++
Sbjct: 296 LCSKKELRKAFAILEDLQKSE 316
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 34/363 (9%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHL------AHGLFDEMRQRGLAPDRY 183
AL L +N+ + P YN++ AK +HL A + +M +GL+PD
Sbjct: 276 ALELASDMNKHGV-EPDSVTYNIL------AKGFHLLGMISGAWEVIRDMLDKGLSPDVI 328
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQM-----EQDNVSGDLVLYSNLIELSRKLGDYSKAIS 238
TY+ L+ + G +D L L+ M E +++ V+ S L K G +A+S
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC----KTGRIDEALS 384
Query: 239 IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
+F ++KA ++PDL+AY+ +I+ K F A L EM D + P++ ++ LL
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
+EA S+ + + LD+ NI+ID Y + +EE LF + + GI P+V
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
++N+L+ Y +++ EA + +++ G+ +VV+Y T+++ Y + L +EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 419 QNNGIQPNAITYSTIISIWEKAGK------------LDRAAMLFQKLRSSGVQIDQVLYQ 466
+ GI P +TYS I + K ++ + + S G+ DQ+ Y
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 467 TMI 469
T+I
Sbjct: 625 TII 627
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 207/481 (43%), Gaps = 27/481 (5%)
Query: 149 AYNVVLRNVLRA-KQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
+YN VL + K W + + E++ + + +TYST++ + L+ ++ +L+
Sbjct: 161 SYNSVLYHFRETDKMWDV----YKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRT 212
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
E ++ +V +++++ KLG A S F + + P + ++N +IN
Sbjct: 213 SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS 272
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
EA L +M +GV PD+V+Y+ L + A V +M D D+ T I
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPN-VVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++ QL ++ G L M G E N ++ + +L ++ EA+ LF M+
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G+ ++V Y+ +I+ K + + A L EM + I PN+ T+ ++ + G L A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMV 502
L L SSG +D VLY +I Y ++G + A L + P + I
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
+ + + EA + G + + +++ Y+ ++ E+ +M+ G P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 563 SNVIALVLNAFGK----------LRE--FEKADALYSQIHDEGCVFPDEVHFQMLSLYGA 610
+ +++ + LRE FEK + EG + PD++ + + Y
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEG-IPPDQITYNTIIQYLC 631
Query: 611 R 611
R
Sbjct: 632 R 632
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/411 (18%), Positives = 170/411 (41%), Gaps = 73/411 (17%)
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
F + +++ + D++ + S + ++ ++ +L++M+D + T SY+++L + +
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE 171
Query: 300 NERF------------------VEALSVFSEMNDAKCPL----------DLTTCNIMIDV 331
++ V+ L ++ DA L + + N ++
Sbjct: 172 TDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG 231
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
Y +L V+ F ++ K G+ P+V S+N L+ EA+ L M K GV+ +
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 392 VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ 451
VTYN + + A +I++M + G+ P+ ITY+ ++ + G +D +L +
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Query: 452 KLRSSGVQIDQVL-YQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARA 506
+ S G +++ ++ M+ + G + A L +++K PD + I L +
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 507 RRVEEATWVFRQA-----------------------------------FAAGEVNDISVF 531
+ + A W++ + ++GE DI ++
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+I+ Y+++ +E+F+ + E G P ++ + K + +A
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 34/363 (9%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHL------AHGLFDEMRQRGLAPDRY 183
AL L +N+ + P YN++ AK +HL A + +M +GL+PD
Sbjct: 276 ALELASDMNKHGV-EPDSVTYNIL------AKGFHLLGMISGAWEVIRDMLDKGLSPDVI 328
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQM-----EQDNVSGDLVLYSNLIELSRKLGDYSKAIS 238
TY+ L+ + G +D L L+ M E +++ V+ S L K G +A+S
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC----KTGRIDEALS 384
Query: 239 IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
+F ++KA ++PDL+AY+ +I+ K F A L EM D + P++ ++ LL
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
+EA S+ + + LD+ NI+ID Y + +EE LF + + GI P+V
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
++N+L+ Y +++ EA + +++ G+ +VV+Y T+++ Y + L +EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 419 QNNGIQPNAITYSTIISIWEKAGK------------LDRAAMLFQKLRSSGVQIDQVLYQ 466
+ GI P +TYS I + K ++ + + S G+ DQ+ Y
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 467 TMI 469
T+I
Sbjct: 625 TII 627
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 208/484 (42%), Gaps = 27/484 (5%)
Query: 146 SVFAYNVVLRNVLRA-KQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
S +YN VL + K W + + E++ + + +TYST++ + L+ ++ +
Sbjct: 158 STQSYNSVLYHFRETDKMWDV----YKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLF 209
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L+ E ++ +V +++++ KLG A S F + + P + ++N +IN
Sbjct: 210 LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCL 269
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
EA L +M +GV PD+V+Y+ L + A V +M D D+ T
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN-VVSYNTLLRVYGESELFGEAIHLFRLM 383
I++ QL ++ G L M G E N ++ + +L ++ EA+ LF M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ G+ ++V Y+ +I+ K + + A L EM + I PN+ T+ ++ + G L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETA 499
A L L SSG +D VLY +I Y ++G + A L + P +
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I + + + EA + G + + +++ Y+ ++ E+ +M+ G
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 560 FPDSNVIALVLNAFGK----------LRE--FEKADALYSQIHDEGCVFPDEVHFQMLSL 607
P + +++ + LRE FEK + EG + PD++ + +
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEG-IPPDQITYNTIIQ 628
Query: 608 YGAR 611
Y R
Sbjct: 629 YLCR 632
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/411 (18%), Positives = 170/411 (41%), Gaps = 73/411 (17%)
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
F + +++ + D++ + S + ++ ++ +L++M+D + T SY+++L + +
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE 171
Query: 300 NERF------------------VEALSVFSEMNDAKCPL----------DLTTCNIMIDV 331
++ V+ L ++ DA L + + N ++
Sbjct: 172 TDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG 231
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
Y +L V+ F ++ K G+ P+V S+N L+ EA+ L M K GV+ +
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 392 VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ 451
VTYN + + A +I++M + G+ P+ ITY+ ++ + G +D +L +
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Query: 452 KLRSSGVQIDQVL-YQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARA 506
+ S G +++ ++ M+ + G + A L +++K PD + I L +
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 507 RRVEEATWVFRQA-----------------------------------FAAGEVNDISVF 531
+ + A W++ + ++GE DI ++
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+I+ Y+++ +E+F+ + E G P ++ + K + +A
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 222/501 (44%), Gaps = 18/501 (3%)
Query: 133 LLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF 192
LLD + + P + ++R RA+ + D + + G+ P +++++
Sbjct: 98 LLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL 157
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE---LSRKLGDYSKAISIFARLKASSIA 249
K + + F+ ++M + GD+ Y L++ L+ ++GD K + I +K S +A
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQI---MKTSGVA 214
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+ + YN++++ K AR L+ EM++ P+ V+++ L++ Y + ++ ++++ +
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVL 270
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+ D+ T +++V V E + + G + +VV+ NTL++ Y
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
A F M++KG NV TYN +I Y + A + +M+ + I+ N T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSS----GVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
++T+I G+ D + + ++ S G +ID Y +I + + A L
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWEDALEFL 448
Query: 486 HELKR--PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
++++ P + R ++ L +++ + Q G V I V C+I+ YS++ K
Sbjct: 449 LKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 508
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ 603
+E+ M GY P S+ V+ F K + + + GCV E +
Sbjct: 509 IEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNP 568
Query: 604 MLSLYGARKDFTMVESLFEKL 624
+L + D LF ++
Sbjct: 569 LLEELCVKGDIQKAWLLFSRM 589
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 302 RFVEALSVFSEMNDA-KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
RF + EM D+ P D +I +G+ +++ + + K GI+P++ +
Sbjct: 91 RFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVF 150
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE--KATNLIQEM 418
N++L V + ++ R M G+ +V TY ++ G SL + L+Q M
Sbjct: 151 NSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK--GLSLTNRIGDGFKLLQIM 208
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
+ +G+ PNA+ Y+T++ K GK+ RA L +++ + + V + +I AY +
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKL 264
Query: 479 AHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
+ LL + PD + + VL RV EA V + + G D+ +
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
+ Y K F +M GY P+ L++ + + + A
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 189/423 (44%), Gaps = 34/423 (8%)
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI-SIFARL 243
Y+ I+ D + + M++ NV D V + LI RK G +K + IF ++
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
+ + ++ F L EA ++ EM G+ +T+ Y+TL+ Y +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
E +F+EM D T NI++D Y + + + L M +G+EPNV SY L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 364 LRVYGESELFGE-AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
+ YG ++ + A F M+K G++ + +Y +I+ Y S HEKA +EM G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
I+P+ TY++++ + ++G + +++ + ++ ++ Y T++ + + GL A+
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 483 RLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
++ E + G + + ++N Y+R
Sbjct: 576 DVVSEFSK-------------------------------MGLQPSVMTYNMLMNAYARGG 604
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF 602
+ + ++ ++M + PDS + ++ AF ++R+F++A + + G V PD +
Sbjct: 605 QDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQV-PDPRSY 663
Query: 603 QML 605
+ L
Sbjct: 664 EKL 666
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 197/430 (45%), Gaps = 11/430 (2%)
Query: 105 SLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWH 164
SL + R S+ F +LL RE L LL + +K + V YN + + ++++
Sbjct: 234 SLASPRACSVLF--TLLGRERMADYILLLLSNLPDKEEFR-DVRLYNAAISGLSASQRYD 290
Query: 165 LAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW--LQQMEQDNVSGDLVLYSN 222
A +++ M + + PD T + LIT K G + W ++M + V ++
Sbjct: 291 DAWEVYEAMDKINVYPDNVTCAILITTLRKAGR-SAKEVWEIFEKMSEKGVKWSQDVFGG 349
Query: 223 LIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
L++ G +A+ I ++ I + I YN++++ + K+ E L EMRD G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 283 VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH-MVEEG 341
+ P +Y+ L+ Y + ++ EM D ++ + +I YG+ M +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA 469
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
F M+K+G++P+ SY L+ Y S +A F M K+G++ +V TY ++++
Sbjct: 470 ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+ +S + K + + M I+ ITY+T++ + K G A + + G+Q
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFR 517
+ Y ++ AY R G A +LL E+ +PD+I T I R R + A + +
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 518 QAFAAGEVND 527
+G+V D
Sbjct: 650 MMVKSGQVPD 659
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 152/329 (46%), Gaps = 10/329 (3%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+ AL + + +K + S ++ YN ++ ++ GLF EMR +GL P TY+
Sbjct: 361 EEALVIQTEMEKKGIRSNTI-VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL---SRKLGDYSKAISIFARLK 244
L+ + + D L++ME + ++ Y+ LI ++K+ D A F R+K
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM--AADAFLRMK 477
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
+ P +Y ++I+ + + +A +EM G+ P +Y+++L + +
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+ + ++ M K T N ++D + + + E + KMG++P+V++YN L+
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y + L + M ++ + +TY+TMI + + + ++A + M +G
Sbjct: 598 NAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQV 657
Query: 425 PNAITYSTIISIWEKAGKL----DRAAML 449
P+ +Y + +I E K D+ A+L
Sbjct: 658 PDPRSYEKLRAILEDKAKTKNRKDKTAIL 686
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 141/341 (41%), Gaps = 66/341 (19%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
A + + + G+ ++ LLL + D D Y+ ++ ++R+ +A V+ M
Sbjct: 240 ACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM 299
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
+ D TC I+I T LR G S
Sbjct: 300 DKINVYPDNVTCAILI--------------------------------TTLRKAGRSA-- 325
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
E +F M +KGV+ + + ++ + E+A + EM+ GI+ N I Y+T+
Sbjct: 326 KEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
+ + K+ ++ LF ++R G++ Y ++ AY A+R+ +PD
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY--------ARRM-----QPDI 432
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV-EVFE 552
+ ET + R+ G ++ + C+I+ Y R KK +++ + F
Sbjct: 433 V--ET----------------LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFL 474
Query: 553 KMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+M++VG P S+ +++A+ EKA A + ++ EG
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 181/412 (43%), Gaps = 73/412 (17%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
AH +F+ + + G P TY+TL+T + S L + ++E++ + D +L++ +I
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK-AKLFREARLLLQEMRDN--- 281
S + G+ +A+ IF ++K S P +N++I +GK KL +RLL +RD
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 282 --------------------------------GVCPDTVSYSTLLAIYVDNERFVEALS- 308
GV PD V+++TL Y A
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN------------ 356
+ M K ++ TC +++ Y + +EE R F+ M+++G+ PN
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 357 -----------------------VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
VV+++TL+ + ++ M + G+ ++
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
++ + Y ++ E EKA ++ +M+ G++PN + Y+ IIS W AG++ +A +++K+
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Query: 454 RS-SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLA 504
G+ + Y+T+I + A A+ LL +++ + +P + ++A
Sbjct: 698 CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 197/431 (45%), Gaps = 12/431 (2%)
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
L + LIE R +A SIF L P LI Y +++ + K F L+ ++
Sbjct: 325 LMNGLIERGRP----QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
NG+ PDT+ ++ ++ ++ +A+ +F +M ++ C +T N +I YG++ +
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 339 EEGDRLFWSM-RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
EE RL M R ++PN + N L++ + EA ++ MQ GV+ +VVT+NT
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 398 MINIYGKSLEHEKATNL-IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
+ Y + A ++ I M +N ++PN T TI++ + + GK++ A F +++
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 457 GVQIDQVLYQTMIVAY---ERAGLVAHAKRLLHELK-RPDNIPRETAIMVLARARRVEEA 512
GV + ++ ++I + V L+ E +PD + T + + ++
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
++ G DI F + Y+R + ++ +MR+ G P+ + +++
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 573 FGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSL-YGARKDFTMVESLFEKLDS-NPNI 630
+ E +KA +Y ++ + P+ ++ L +G K E L + ++ N
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Query: 631 NKKELHLVVSG 641
+K + L+ G
Sbjct: 741 TRKTMQLIADG 751
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 133 LLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF 192
LLD + + P+ N++++ ++ A + +M+ G+ PD T++TL +
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 193 GKHG-LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPD 251
+ G + + +M + V ++ ++ + G +A+ F R+K + P+
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS 311
L +NS+I F ++ M + GV PD V++STL+ + +++
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 312 EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
+M + D+ +I+ Y + E+ +++ MRK G+ PNVV Y ++ + +
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 372 LFGEAIHLFRLMQK-KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
+A+ +++ M G+ N+ TY T+I +G++ + KA L+++M+ + P T
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745
Query: 431 STIISIWEKAG 441
I W+ G
Sbjct: 746 QLIADGWKSIG 756
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 199/427 (46%), Gaps = 11/427 (2%)
Query: 64 SPYHRRTRTQQQMFLDHSIDMDELLASIS-STQNEQELHAVMSLYNQRQLSIRFMVSLLS 122
SP R ++ + H I + + LA + +T + H YN+ M+ L
Sbjct: 110 SPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNE-------MIDLSG 162
Query: 123 RETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDR 182
+ + A L+D + + + S+ + +++R +RA A F+ M G PD+
Sbjct: 163 KVRQFDLAWHLIDLMKSRNV-EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDK 221
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
+S +I++ + + + + +D D+++Y+NL+ + G+ S+A +F
Sbjct: 222 IAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
+K + I P++ Y+ +I+ + A + +M D+G P+ ++++ L+ ++V R
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
+ L V+++M C D T N +I+ + + +E ++ +M K E N ++NT
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
+ R + A ++ M + + N VTYN ++ ++ S + + +EM +
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV-LYQTMIVAYERAGLVAHA 481
++PN TY +++++ G + A LF+++ + LY+ ++ RAG +
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKH 520
Query: 482 KRLLHEL 488
+ L+ ++
Sbjct: 521 EELVEKM 527
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 168/381 (44%), Gaps = 6/381 (1%)
Query: 220 YSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR 279
Y+ +I+LS K+ + A + +K+ ++ + + +I + +A L EA M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 280 DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
D G PD +++S +++ R EA S F + D P D+ ++ + + +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEIS 272
Query: 340 EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
E +++F M+ GIEPNV +Y+ ++ A +F M G N +T+N ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
++ K+ EK + +M+ G +P+ ITY+ +I + L+ A + + +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR---ARRVEEATWVF 516
++ + T+ E+ V A R+ ++ P +L R + +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 517 RQAFAAGEVN-DISVFGCMINLYSRNKKYTNVVEVFEKM-REVGYFPDSNVIALVLNAFG 574
++ EV +++ + ++ ++ + N ++F++M E P ++ +VL
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 575 KLREFEKADALYSQIHDEGCV 595
+ + +K + L ++ +G V
Sbjct: 513 RAGQLKKHEELVEKMIQKGLV 533
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 35/374 (9%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GLAPDRYTY 185
+Q ++ L + + + SPSV +N +L +L+ + +AH LFDEMR+ G+ PD YT+
Sbjct: 154 FQESVKLFQTMKQMGI-SPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTF 212
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-- 243
+TLI F K+ ++D + + ME + + D+V Y+ +I+ + G A ++ + +
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
KA+ + P++++Y +++ + + EA L+ +M G+ P+ V+Y+TL+ + R+
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 304 VEALSVFSEMNDAKCPL--DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
E + NDA D T NI+I + ++ ++F M M + P+ SY+
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L+R F A LF + +K V + GK +
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEV------------LLGK----------------D 424
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
+P A Y+ + GK +A +F++L GVQ D Y+T+I + R G A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPA 483
Query: 482 KRLLHELKRPDNIP 495
LL + R + +P
Sbjct: 484 YELLVLMLRREFVP 497
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 196/434 (45%), Gaps = 22/434 (5%)
Query: 166 AHGL--FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS---LFWLQQMEQDNVSGDLVLY 220
A GL FD + +G + ++ ++ G+ L+ + LF +++ V +
Sbjct: 82 ADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 141
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD 280
++LI G + +++ +F +K I+P ++ +NS++++ K A L EMR
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 281 N-GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
GV PD+ +++TL+ + N EA +F +M C D+ T N +ID + V+
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 340 EGDRLFWSMRKMG--IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ M K + PNVVSY TL+R Y + EA+ +F M +G++ N VTYNT
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 398 MINIYGKSLEHEKATNLIQEMQN--NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
+I ++ +++ +++ + P+A T++ +I AG LD A +FQ++ +
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA--------- 506
+ D Y +I A+ L +EL + + + LA A
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLC 441
Query: 507 --RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
+ ++A VFRQ G V D + +I + R K+ E+ M + PD
Sbjct: 442 ANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLE 500
Query: 565 VIALVLNAFGKLRE 578
L+++ K+ E
Sbjct: 501 TYELLIDGLLKIGE 514
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 24/294 (8%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ---------RGLAPDRYTYSTLITHFGKH 195
P+ YN +++ + A ++ DE++ APD T++ LI
Sbjct: 314 PNAVTYNTLIKGLSEAHRY-------DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI------- 248
G LD+++ Q+M + D YS LI ++ +A ++F L +
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
P AYN M ++A + +++ GV D SY TL+ + +F A
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYE 485
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ M + DL T ++ID ++ M + P +++++L
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
+ + E+ L LM +K ++QN+ ++ + S + EKA +++ + +NG
Sbjct: 546 KRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG 599
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P + A V+L ++++ + +F +M + G+ + + Y+ L+ K G + +
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +ME+ V D+ Y+ LI + K + +A+S+ R++ S +AP+++ YNS I+ F +
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
REA L +E++D+ V + V+Y+TL+ Y EAL + M + T
Sbjct: 286 EGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N ++ + + E +RL M IEP+ ++ NTL+ Y + E A+ + + M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+ G++ ++ +Y +I+ + K LE E A + M G P TYS ++ + K D
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRETAI 500
L ++ G+ D LY+ +I + V +AK L +++ D++ T
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 501 MVLARARRVEEATWVF 516
R +V EA+ +F
Sbjct: 525 YAYWRTGKVTEASALF 540
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 180/357 (50%), Gaps = 4/357 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHL-AHGLFDEMRQ 175
+V S+ D ++A LL + EK ++ P +F YN ++ +V K H A + D M +
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVF-PDIFTYNTLI-SVYCKKSMHFEALSVQDRMER 266
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G+AP+ TY++ I F + G + + +++ +D+V+ + V Y+ LI+ ++ D +
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+ + +++ +P ++ YNS++ + REA LL EM + PD ++ +TL+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y E V A+ V +M ++ LD+ + +I + ++ +E +SM + G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+Y+ L+ + E L +K+G+ +V Y +I K + + A L
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ M+ G+ +++ ++T+ + + GK+ A+ LF + + + ++ LY+++ +Y
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 245/540 (45%), Gaps = 50/540 (9%)
Query: 78 LDHSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWI 137
L H +D LL S +TQ EL ++ S Y LS F + W +L
Sbjct: 30 LKHKVD-SGLLKSAITTQVISEL-SLFSGYGGPSLSWSFFI--------WTDSLP----S 75
Query: 138 NEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR--------------GLAPD-- 181
++ +L S ++ ++L + + K + AH L D++ QR G++ D
Sbjct: 76 SKHSLQS----SWKMILI-LTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPE 130
Query: 182 --RYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL----VLYSNLIELSRKLGDYSK 235
+ +S L+ ++ K G+++ S+ +Q+ + L VL ++L++ ++L D
Sbjct: 131 DVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK--QRLTD--T 186
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
IF ++ + ++ YN +++ K+ +A LL EM + GV PD +Y+TL++
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+Y EALSV M + ++ T N I + + + E RLF ++ +
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTA 305
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N V+Y TL+ Y EA+ L +M+ +G VVTYN+++ + +A L+
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
EM I+P+ IT +T+I+ + K + A + +K+ SG+++D Y+ +I + +
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 476 GLVAHAKRLLHELKRPDNIPRETAIMVLARA----RRVEEATWVFRQAFAAGEVNDISVF 531
+ +AK L + P L + +E T + + G D++++
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
+I + ++ +FE M + G DS + + A+ + + +A AL+ +++
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYN 545
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 184/429 (42%), Gaps = 10/429 (2%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
N +L N+ + A L + M + P + S L+ + LD ++ L+ M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV---FGKAKL 267
D + Y+ +I K G A+ + + S PD+I YN++I +G A+
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE- 226
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
+A ++ NG P ++Y+ L+ + A+ V +M C D+ T N
Sbjct: 227 --QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+++ + +EE + + G+E N V+YNTLL E + E + +M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
V+TYN +IN K+ +A + +M P+ +TY+T++ K G +D A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVL 503
L L+++ + Y ++I + GL+ A L H++ PD+I R + I
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
RA VEEA V ++ G S + +I + K+ +EV E M G PD
Sbjct: 465 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 524
Query: 564 NVIALVLNA 572
+ ++
Sbjct: 525 TIYTAIVKG 533
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 199/428 (46%), Gaps = 9/428 (2%)
Query: 88 LASISSTQNEQELHAVMSLYNQRQ--LSIRFMVSLLSRETDWQRALALLDWINEKALYSP 145
L S + +L VM+ +NQ S +V L+R +A+ +L + P
Sbjct: 114 LCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG-GVP 172
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL-FW 204
YN+++ N+ + A L ++M G PD TY+T+I +G + ++ FW
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW 232
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
Q+ Q+ ++ Y+ L+EL + ++AI + + PD++ YNS++N +
Sbjct: 233 KDQL-QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLT 323
E ++Q + +G+ +TV+Y+TLL +E + E + + M + CP +T
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
NI+I+ + ++ F+ M + P++V+YNT+L + + +AI L L+
Sbjct: 352 Y-NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ ++TYN++I+ K +KA L +M + GI P+ IT ++I + +A +
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+ A + ++ + G I Y+ +I + + A ++ + P ET +
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 504 ARARRVEE 511
+ VEE
Sbjct: 531 VKG--VEE 536
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 228/485 (47%), Gaps = 8/485 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY-TYSTL 188
A+ DW+ + AY+++LR + R ++W A L E+ Y ++T+
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 189 ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI 248
I K G + + W M + V ++ L+ L +K + +A F+ ++ I
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
+ AY+SMI ++ + +L+ +A ++ M+ + V ++ +L Y + A S
Sbjct: 277 VCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ M A ++ N +I YG++ +E LF + +G+EP+ SY +++ +G
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
++ + EA H ++ +++ G + N T+IN+ K + + A I++M G Q ++I
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI 455
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
I+ +EK GK+D + + + ++++Q + ++++AY + G+V LL E
Sbjct: 456 L-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREK 514
Query: 489 KRPDNIPRE----TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
K D+ I + ++ +A ++ + E ++ + MI++Y+ ++
Sbjct: 515 KWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEF 574
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ- 603
+ +++ ++ G D ++V+ + K E+A ++ + ++ + PD F+
Sbjct: 575 SEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRD 634
Query: 604 MLSLY 608
ML +Y
Sbjct: 635 MLRIY 639
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 191/397 (48%), Gaps = 8/397 (2%)
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHG-LLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
GL E + R A + + Y LI + G L D+ + +ME D +L + S +I++
Sbjct: 509 GLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDE-EINLHITSTMIDI 567
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD-NGVCP 285
+G++S+A ++ LK+S + D I ++ ++ ++ KA EA +L+ M + + P
Sbjct: 568 YTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVP 627
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D + +L IY + + ++ + + + N +I+ + ++E F
Sbjct: 628 DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTF 687
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
M + G PN V++N LL VYG+++LF + LF L ++ GV +V++YNT+I YGK+
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKN 746
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
++ ++ I+ MQ +G + Y+T++ + K ++++ + ++++ S D Y
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 466 QTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFA 521
MI Y G + +L ELK PD T I VEEA + ++
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ D + ++ RN ++ ++ M+++G
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 168/344 (48%), Gaps = 37/344 (10%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM-EQDNVSGDLVLYSNLI 224
A L+ ++ G+ DR +S ++ + K G L+ + L+ M EQ ++ D+ L+ +++
Sbjct: 577 AEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDML 636
Query: 225 ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
+ +K K ++ R++ S I + YN +IN +A E +EM G
Sbjct: 637 RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P+TV++ N+++DVYG+ + ++ + L
Sbjct: 697 PNTVTF-----------------------------------NVLLDVYGKAKLFKKVNEL 721
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
F ++ G+ +V+SYNT++ YG+++ + + MQ G ++ YNT+++ YGK
Sbjct: 722 FLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
+ EK ++++ M+ + P+ TY+ +I+I+ + G +D A + ++L+ SG+ D
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 465 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR 508
Y T+I AY G+V A L+ E++ + IP + L A R
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALR 884
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 188/424 (44%), Gaps = 36/424 (8%)
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
++S+L+ + KHG++D L L++ + + + + LY LI ++ G + A+ I+
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
S +L ++MI+++ F EA L ++ +GV D + +S ++ +YV
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 304 VEALSVFSEMNDAK--CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
EA SV M++ K P D+ M+ +Y + + ++ L++ +RK GI N YN
Sbjct: 610 EEACSVLEIMDEQKDIVP-DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYN 668
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
++ + E F M + G N VT+N ++++YGK+ +K L + +
Sbjct: 669 CVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRH 728
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
G+ + I+Y+TII+ + K + + ++ G + Y T++ AY + +
Sbjct: 729 GV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKF 787
Query: 482 KRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRN 541
+ +L +K+ + P D + MIN+Y
Sbjct: 788 RSILKRMKKSTSGP-------------------------------DHYTYNIMINIYGEQ 816
Query: 542 KKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVH 601
V +V ++++E G PD ++ A+G E+A L ++ + PD+V
Sbjct: 817 GWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN-IIPDKVT 875
Query: 602 FQML 605
+ L
Sbjct: 876 YTNL 879
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 230/530 (43%), Gaps = 16/530 (3%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
AY+ ++ R + + A + D M+Q + + ++ + + G ++ + L M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
E S +++ Y+ LI K+ A +F RL + PD +Y SMI +G+A +
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLL---AIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
EA+ QE++ G P++ + TL+ A Y D + A+ +M C +
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRD---GAIKTIEDMTGIGCQYS-SIL 456
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
I++ Y ++ ++ + I N S+++L+ Y + + + + L R +
Sbjct: 457 GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKW 516
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
+ Y+ +I +S + A + + + N ST+I I+ G+
Sbjct: 517 RDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSE 576
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-----PDNIPRETAI 500
A L+ L+SSGV +D++ + ++ Y +AG + A +L + PD +
Sbjct: 577 AEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDML 636
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+ + ++ ++ + +G + ++ C+IN +R + FE+M G+
Sbjct: 637 RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVES 619
P++ ++L+ +GK + F+K + L+ G V D + + +++ YG KD+T + S
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV--DVISYNTIIAAYGKNKDYTNMSS 754
Query: 620 LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIGNHDH 669
+ + + E + + Y + ++ I+ RM K+ DH
Sbjct: 755 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK-KSTSGPDH 803
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 111 QLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
++ +V + + + A ++L+ ++E+ P V+ + +LR + L+
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLY 652
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKL 230
+R+ G+ ++ Y+ +I + LD ++M + + + V ++ L+++ K
Sbjct: 653 YRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA 712
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
+ K +F K + D+I+YN++I +GK K + ++ M+ +G +Y
Sbjct: 713 KLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAY 771
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+TLL Y +++ + S+ M + D T NIMI++YG+ ++E + +++
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE 831
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G+ P++ SYNTL++ YG + EA+ L + M+ + + + VTY ++ ++ E +
Sbjct: 832 SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLE 891
Query: 411 ATNLIQEMQNNGI 423
A M+ GI
Sbjct: 892 AIKWSLWMKQMGI 904
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 13/383 (3%)
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
+ E P + YN +++ +A Q A +M RG D+ TY T+I
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYN 256
S + Q+M++ + +S +I K G ++ ++F + P++ Y
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 257 SMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
+I+ + K+ +A LL M D G PD V+YS ++ N R EAL F
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH----- 421
Query: 317 KCPLDLTTCNIM-----IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
C D N M ID G+ V+E +RLF M + G + YN L+ + +
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 372 LFGEAIHLFRLM-QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
EAI LF+ M +++G Q V TY +++ K +E+A L M + GI P A +
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL-K 489
+ + +GK+ RA + +L GV +D + MI +AG + A +L + +
Sbjct: 542 RALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITE 600
Query: 490 RPDNIPRETAIMVLARARRVEEA 512
R +P +++ R+V +A
Sbjct: 601 RGREVPGRIRTVMINALRKVGKA 623
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 189/416 (45%), Gaps = 20/416 (4%)
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
F+ +Q + +L Y +L+++ D + + + +K + A N++I F
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSF 197
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLL-----AIYVDNERFVEALSVFSEMNDAK 317
GK + E + ++M++NG+ P +Y+ L+ A++VD+ A VF M +
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS-----AERVFEVMESGR 252
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR-VYGESELFGEA 376
D+ T N MI Y + ++ M G E + ++Y T+++ Y +S+ FG
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD-FGSC 311
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
+ L++ M +KG+Q ++ +I K + + + + M G +PN Y+ +I
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP- 495
+ K+G ++ A L ++ G + D V Y ++ + G V A H R D +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAI 430
Query: 496 ----RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+ I L +A RV+EA +F + G D + +I+ +++++K + +F
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 552 EKM-REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLS 606
++M E G ++L+ K E+A L+ + D+G + P F+ LS
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG-ITPTAACFRALS 545
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 159/372 (42%), Gaps = 42/372 (11%)
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM-- 351
LA VD RFV SE+ + P+ ++ N +I +G+L MVEE L W RKM
Sbjct: 164 LAKDVDRIRFVS-----SEIKKFEFPMTVSAANALIKSFGKLGMVEE---LLWVWRKMKE 215
Query: 352 -GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
GIEP + +YN L+ + A +F +M+ ++ ++VTYNTMI Y K+ + +K
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A +++M+ G + + ITY T+I L+Q++ G+Q+
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP--------- 326
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
HA L+ I L + ++ E VF G ++++
Sbjct: 327 --------PHAFSLV--------------IGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
+ +I+ Y+++ + + + +M + G+ PD ++V+N K E+A +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 591 DEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLN 650
+G + ++ G E LFE++ + + + + +++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 651 DASRIMNRMNHK 662
+A + RM +
Sbjct: 485 EAIALFKRMEEE 496
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
+M++ G+ P YTY+ L+ +DS+ + ME + D+V Y+ +I+ K G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
KA+ ++ D I Y +MI F L QEM + G+ ++S
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
++ + E +VF M ++ ++ID Y + VE+ RL M
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
G +P+VV+Y+ ++ ++ EA+ F + G+ N + Y+++I+ GK+ ++A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
L +EM G ++ Y+ +I + K K+D A LF+++ DQ +Y I+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYTYTIL 509
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 9/242 (3%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P V Y+VV+ + + + A F R GLA + YS+LI GK G +D +
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
++M + + D Y+ LI+ K +AI++F R++ D Y I +
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLS 511
Query: 263 GKAKLFR--EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
G K R EA L M D G+ P + L + + A + E+ L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE-PN---VVSYNTLLRVYGESELFGEA 376
D C MI+ + ++E +L + + G E P V N L +V G+++L +
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV-GKADLAMKL 629
Query: 377 IH 378
+H
Sbjct: 630 MH 631
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 176/389 (45%), Gaps = 37/389 (9%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L ++ A LL + + + P+V +YN V+ R K LA +F + ++
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGI-GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
GL P+ YTYS LI ++ ++L + M N+ + V+Y +I K+G SKA
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 237 ISIFARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
+ A + + + ++YNS+I+ F K A +EM NG+ P+ ++Y++L+
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
N R +AL + EM + LD+ +ID + + +E LF + + G+ P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN--------------- 400
+ YN+L+ + A+ L++ M K G++ ++ TY T+I+
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 401 -------------IY-------GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
IY K + K + +EM+ N + PN + Y+ +I+ +
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
G LD A L ++ G+ D + ++
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 249/566 (43%), Gaps = 83/566 (14%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRG 177
V + D A +LL + EK L PS Y V+ ++ A L DEM G
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
++ + ++LIT K+ L S+L +ME++ S + V +S LIE RK G+ KA+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKA-------KLF---------------------- 268
+ +++ + P + +++I + K KLF
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 269 -----REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
EA LL +M G+ P+ VSY+ ++ + + A VFS + + +
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF-RL 382
T +I+ID + H + + M IE N V Y T++ + +A L +
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+++K + + ++YN++I+ + K E + A +EM NGI PN ITY+++++ K +
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 443 LDRAAMLFQKLRSSGVQID-----------------------------------QVLYQT 467
+D+A + ++++ GV++D Q +Y +
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 468 MIVAYERAGLVAHA----KRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
+I + G + A K++L + R D T I L + + A+ ++ + A G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF--GKLRE--F 579
V D ++ ++N S+ ++ VV++FE+M++ P+ L+ NA G RE
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN----VLIYNAVIAGHYREGNL 810
Query: 580 EKADALYSQIHDEGCVFPDEVHFQML 605
++A L+ ++ D+G + PD F +L
Sbjct: 811 DEAFRLHDEMLDKG-ILPDGATFDIL 835
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 8/317 (2%)
Query: 123 RETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM-RQRGLAPD 181
R D Q AL +++ + + V Y ++ + + Q A L M ++ L
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGV-VYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 182 RYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
+Y+++I F K G +DS++ ++M + +S +++ Y++L+ K +A+ +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNE 301
+K + D+ AY ++I+ F K A L E+ + G+ P Y++L++ + +
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVY---GQLHMVEEGDRLFWSMRKMGIEPNVV 358
V AL ++ +M DL T +ID G L + E L+ M+ +G+ P+ +
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE---LYTEMQAVGLVPDEI 760
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
Y ++ + F + + +F M+K V NV+ YN +I + + ++A L EM
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 419 QNNGIQPNAITYSTIIS 435
+ GI P+ T+ ++S
Sbjct: 821 LDKGILPDGATFDILVS 837
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 1/282 (0%)
Query: 133 LLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF 192
L + I EK L S +YN ++ + + A ++EM G++P+ TY++L+
Sbjct: 571 LANMIEEKRL-CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
K+ +D +L +M+ V D+ Y LI+ K + A ++F+ L + P
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
YNS+I+ F A L ++M +G+ D +Y+TL+ + + + A +++E
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
M D ++++ + + ++F M+K + PNV+ YN ++ +
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
EA L M KG+ + T++ +++ +L+ +A +L
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 211/480 (43%), Gaps = 13/480 (2%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPD-RYTYSTLITHFGKHGLLDSSLFWLQQ 207
A+N +L + +Q A + ++M + + P Y TL ++ L ++ + +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY-SR 223
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
M V GD V L+ S + ++A+ + +R PD + Y+ + K
Sbjct: 224 MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLD 283
Query: 268 FREARLLLQEMRDNGVC-PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
A LL+EM++ +C P +Y++++ V +A+ + EM +++
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
+I + + + + LF M K G PN V+++ L+ + ++ +A+ ++ M+
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G+ +V +T+I + K +HE+A L E G+ N +TI+S K GK D A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEA 462
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK----RLLHELKRPDNIPRETAIMV 502
L K+ S G+ + V Y +++ + R + A+ +L + +P+N I
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 503 LARARRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
R + A V ++ EVN + V+ +IN + + + E+ M E
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGV-VYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 562 DSNV-IALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESL 620
S + +++ F K E + A A Y ++ G + P+ + + L + G K+ M ++L
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG-ISPNVITYTSL-MNGLCKNNRMDQAL 639
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 88 LASISSTQNEQELHAVMSLYNQRQLSIRFM-----VSLLSRETDWQRALALLDWINEKAL 142
L + T +EL A M +++L + M + +E + A+A + + +
Sbjct: 558 LCKVGQTSKARELLANM--IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
SP+V Y ++ + + + A + DEM+ +G+ D Y LI F K ++S+
Sbjct: 616 -SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
++ ++ ++ +Y++LI R LG+ A+ ++ ++ + DL Y ++I+
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K A L EM+ G+ PD + Y+ ++ +FV+ + +F EM ++
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
N +I + + ++E RL M GI P+ +++ L+
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ + ++ + A AL + E+ L +PS YN ++ A L+ +M +
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGL-NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 177 GLAPDRYTYSTLITHFGKHG--LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
GL D TY+TLI K G +L S L+ +M+ + D ++Y+ ++ K G +
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELY--TEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
K + +F +K +++ P+++ YN++I + EA L EM D G+ PD ++ L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 295 AIYVDNERFVEALSV 309
+ V N + V A S+
Sbjct: 837 SGQVGNLQPVRAASL 851
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 150/338 (44%), Gaps = 10/338 (2%)
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
Q + + E L+ M +G++ + V+ L+R E EA+ + ++G + + +
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQ-PNAITYSTIISIWEKAGKLDRAAMLFQK 452
Y+ + K+L+ A +L++EM+ + P+ TY+++I K G +D A L +
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR---- 508
+ S G+ ++ V ++I + + + A L ++++ P VL R
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
+E+A +++ G + +I + + +K+ +++F++ E G + V
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNT 448
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGAR-KDFTMVESLFEK-LDS 626
+L+ K + ++A L S++ G + P+ V + + L R K+ + +F L+
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRG-IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 627 NPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
N +++ G + D N A ++N M I
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQN-ALEVVNHMTSSNI 544
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 153/323 (47%), Gaps = 4/323 (1%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
++S+ F K FR A +M+D G P S + ++ + R AL + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
K + T N+++ Y + +++G L M ++G VSYNTL+ + E L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A+ L +M K G+Q NVVT+NT+I+ + ++++ ++A+ + EM+ + PN +TY+T+I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+ + + G + A ++ + +G+Q D + Y +I + A + + EL + + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 495 PRETA----IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P + IM + + +++ +G + F +++ + RN+ + +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 551 FEKMREVGYFPDSNVIALVLNAF 573
+M DS + V N
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGL 493
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 123/255 (48%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+ + ++ I+P+ N +++ + ++ + LLQ+M G VSY+TL+A
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + AL + + M + ++ T N +I + + ++E ++F M+ + + P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N V+YNTL+ Y + A + M G+Q++++TYN +I K + KA +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+E+ + PN+ T+S +I DR L++ + SG ++ + ++ A+ R
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 476 GLVAHAKRLLHELKR 490
A ++L E+ R
Sbjct: 462 EDFDGASQVLREMVR 476
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 147/311 (47%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P+V + N + ++L + +A + EMR+ ++P+ YT + +++ + + G LD +
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
LQ ME+ V Y+ LI + G S A+ + + S + P+++ +N++I+ F
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+A +EA + EM+ V P+TV+Y+TL+ Y A + +M D+
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T N +I + + + + K + PN +++ L+ + L++
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M + G N T+N +++ + ++ + + A+ +++EM I ++ T + + + GK
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Query: 443 LDRAAMLFQKL 453
L Q++
Sbjct: 499 DQLVKKLLQEM 509
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 36/356 (10%)
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI-MIDVYGQLHMVEEGDRLFWSM 348
+ +L + ++F A F +M D + +CN M + GQ V+ R + M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYREM 229
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
R+ I PN + N ++ Y S + I L + M++ G + V+YNT+I + +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A L M +G+QPN +T++T+I + +A KL A+ +F ++++ V + V Y T+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
I Y + G HE+ A + G DI
Sbjct: 350 INGYSQQGD--------HEM-----------------------AFRFYEDMVCNGIQRDI 378
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ +I + K + +++ + P+S+ + ++ + ++ LY
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 589 IHDEGCVFPDEVHFQML-SLYGARKDFTMV-ESLFEKLDSNPNINKKELHLVVSGI 642
+ GC P+E F ML S + +DF + L E + + ++ + +H V +G+
Sbjct: 439 MIRSGC-HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL L + + + L P+V +N ++ RA + A +F EM+ +AP+ TY+TLI
Sbjct: 292 ALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ + G + + + + M + + D++ Y+ LI K KA L ++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+ ++++I K L + M +G P+ +++ L++ + NE F A V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 310 FSEMNDAKCPLDLTT----CN 326
EM PLD T CN
Sbjct: 471 LREMVRRSIPLDSRTVHQVCN 491
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 153/323 (47%), Gaps = 4/323 (1%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
++S+ F K FR A +M+D G P S + ++ + R AL + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
K + T N+++ Y + +++G L M ++G VSYNTL+ + E L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A+ L +M K G+Q NVVT+NT+I+ + ++++ ++A+ + EM+ + PN +TY+T+I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+ + + G + A ++ + +G+Q D + Y +I + A + + EL + + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 495 PRETA----IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P + IM + + +++ +G + F +++ + RN+ + +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 551 FEKMREVGYFPDSNVIALVLNAF 573
+M DS + V N
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGL 493
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 123/255 (48%)
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+ + ++ I+P+ N +++ + ++ + LLQ+M G VSY+TL+A
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + AL + + M + ++ T N +I + + ++E ++F M+ + + P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N V+YNTL+ Y + A + M G+Q++++TYN +I K + KA +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+E+ + PN+ T+S +I DR L++ + SG ++ + ++ A+ R
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 476 GLVAHAKRLLHELKR 490
A ++L E+ R
Sbjct: 462 EDFDGASQVLREMVR 476
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 147/311 (47%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P+V + N + ++L + +A + EMR+ ++P+ YT + +++ + + G LD +
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
LQ ME+ V Y+ LI + G S A+ + + S + P+++ +N++I+ F
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+A +EA + EM+ V P+TV+Y+TL+ Y A + +M D+
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T N +I + + + + K + PN +++ L+ + L++
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M + G N T+N +++ + ++ + + A+ +++EM I ++ T + + + GK
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Query: 443 LDRAAMLFQKL 453
L Q++
Sbjct: 499 DQLVKKLLQEM 509
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 151/356 (42%), Gaps = 36/356 (10%)
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI-MIDVYGQLHMVEEGDRLFWSM 348
+ +L + ++F A F +M D + +CN M + GQ V+ R + M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYREM 229
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
R+ I PN + N ++ Y S + I L + M++ G + V+YNT+I + +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A L M +G+QPN +T++T+I + +A KL A+ +F ++++ V + V Y T+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
I Y + G HE+ A + G DI
Sbjct: 350 INGYSQQGD--------HEM-----------------------AFRFYEDMVCNGIQRDI 378
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ +I + K + +++ + P+S+ + ++ + ++ LY
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 589 IHDEGCVFPDEVHFQML-SLYGARKDFTMV-ESLFEKLDSNPNINKKELHLVVSGI 642
+ GC P+E F ML S + +DF + L E + + ++ + +H V +G+
Sbjct: 439 MIRSGC-HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL L + + + L P+V +N ++ RA + A +F EM+ +AP+ TY+TLI
Sbjct: 292 ALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ + G + + + + M + + D++ Y+ LI K KA L ++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P+ ++++I K L + M +G P+ +++ L++ + NE F A V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 310 FSEMNDAKCPLDLTT----CN 326
EM PLD T CN
Sbjct: 471 LREMVRRSIPLDSRTVHQVCN 491
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/556 (21%), Positives = 240/556 (43%), Gaps = 46/556 (8%)
Query: 94 TQNEQELHAVMS--LYNQRQLSIRFMVSLLSR-ETDWQRALALLDWINEKALYSPSVFAY 150
TQ Q L ++S LY I ++ SR E + + + D + E + + Y
Sbjct: 104 TQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCY 163
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS-LFWLQQME 209
+ +L ++ + LA+ + M G Y T++ K+G +++ +F + ++
Sbjct: 164 SSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK 223
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKLF 268
V + S L+ R L + A+ +F + K + AP+ ++Y+ +I+ +
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGL-NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
EA L +M + G P T +Y+ L+ D +A ++F EM C ++ T ++
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
ID + +EE + + M K I P+V++YN L+ Y + A L +M+K+
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG-------------------------- 422
+ NV T+N ++ + + KA +L++ M +NG
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 423 ---------IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
I+P+ +T++ II+ + K GK D A+ + G+ +D+V T+I
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 474 RAGLVAHAKRLLHEL--KRPDNIPRETAIMV--LARARRVEEATWVFRQAFAAGEVNDIS 529
+ G A +L L R P +++ L++ +V+E + + G V +
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
+ +++ R+ T + E M+ G P+ +++N + E+A+ L S +
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 590 HDEGCVFPDEVHFQML 605
D G V P+ V + ++
Sbjct: 643 QDSG-VSPNHVTYTVM 657
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 204/471 (43%), Gaps = 31/471 (6%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PSV YN ++ + + A L M +R P+ T++ L+ + G ++
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L++M + +S D+V Y+ LI+ + G + A + + + I PD + + ++IN F K
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A L M G+ D V+ +TL+ + +AL + + + +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N+++D+ + V+E + + K+G+ P+VV+Y TL+ S + + LM+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
G NV Y +IN + E+A L+ MQ++G+ PN +TY+ ++ + GKLD
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAY--ERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
RA + + G +++ +Y +++ + + G+ + + ++ + P ++
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELI 728
Query: 503 --------------------LARARRVEEATWVFRQAFAAG----EVNDISVFGCMINLY 538
L + R +E+ + + G + DI ++ Y
Sbjct: 729 SVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDI-----IMESY 783
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
KK+T +E+ + + G+ P LV+ K + E+A L ++
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 153/333 (45%), Gaps = 7/333 (2%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L R +A+ LL + + L SP + +YNV++ + R + A+ L M + P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGL-SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
D T++ +I F K G D + +L M + +S D V + LI+ K+G A+ I
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
L I + N ++++ K +E +L ++ G+ P V+Y+TL+ + +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
+ + M + C ++ I+I+ Q VEE ++L +M+ G+ PN V+Y
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY---GKSLEHEKATNLIQE 417
+++ Y + A+ R M ++G + N Y++++ + K +++ + + + +
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST-VSD 713
Query: 418 MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
+ P I + +IS+ E+ G +F
Sbjct: 714 IALRETDPECI--NELISVVEQLGGCISGLCIF 744
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 159/343 (46%), Gaps = 5/343 (1%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L + W + L + W+ ++ Y P Y+ ++ + + Q +A LF EM+ G P
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 181 DRYTYSTLIT-HF---GKHGLLDSSLFWLQQMEQ-DNVSGDLVLYSNLIELSRKLGDYSK 235
D Y+ LIT H K L+ +L +M+ + ++V Y+ L+ + G +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
++F L S ++PD+ +N +++ +GK + +E +L MR N PD ++++ L+
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + F + F + +K L T N MI YG+ M+++ + +F M M P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ ++Y ++ +YG A +F + + T N M+ +Y ++ + +A L
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
+ P+A TY + + KA ++ +L +K+ G+
Sbjct: 407 HNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 36/367 (9%)
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD Y+ +I+V GK R A L EM+++G PD Y+ L+ ++ +AL
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 310 FSEMNDA-----KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
D +C ++ T NI++ + Q V++ + LF + + P+V ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
YG++ + E + M+ + +++T+N +I+ YGK E EK + + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P T++++I + KA +D+A +F+K+ + Y+ MI+ Y G V+ A+ +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 485 LHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
E+ D RV +A S M+ +Y RN Y
Sbjct: 371 FEEVGESD---------------RVLKA----------------STLNAMLEVYCRNGLY 399
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQM 604
++F PD++ + A+ K E+ L ++ +G V +
Sbjct: 400 IEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEA 459
Query: 605 LSLYGAR 611
L ++G+R
Sbjct: 460 LEVFGSR 466
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 134/269 (49%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V YN++LR ++ + + LF ++ ++PD YT++ ++ +GK+G++
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + D++ ++ LI+ K ++ K F L S P L +NSMI +GK
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A++ +A + ++M D P ++Y ++ +Y A +F E+ ++ L +T
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAST 385
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N M++VY + + E D+LF + + P+ +Y L + Y ++++ + L + M+
Sbjct: 386 LNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKME 445
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATN 413
K G+ N + + ++G L + N
Sbjct: 446 KDGIVPNKRFFLEALEVFGSRLPGSGSEN 474
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 178/383 (46%), Gaps = 10/383 (2%)
Query: 119 SLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM-RQRG 177
SL+SR +D + + LD K + F ++ + ++ +W +F M +QR
Sbjct: 73 SLMSRISDREPLVKTLDKY-VKVVRCDHCF---LLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
PD YS LI+ GK G +++ +M+ D +Y+ LI D +KA+
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 238 ----SIFARLKA-SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
++K P+++ YN ++ F ++ + L +++ + V PD +++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ Y N E +V + M +C D+ T N++ID YG+ E+ ++ F S+ +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+P + ++N+++ YG++ + +A +F+ M + +TY MI +YG +A
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ +E+ + A T + ++ ++ + G A LF + V D Y+ + AY
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 473 ERAGLVAHAKRLLHELKRPDNIP 495
+A + + L+ ++++ +P
Sbjct: 429 TKADMKEQVQILMKKMEKDGIVP 451
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 9/328 (2%)
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY--- 402
W ++ P+ Y+ L+ V G+ A+ LF M+ G + + YN +I +
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 403 -GKSLEHEKATNLIQEMQN-NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
K+ EK + +M+ QPN +TY+ ++ + ++GK+D+ LF+ L S V
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 461 DQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVF 516
D + ++ AY + G++ + +L ++ +PD I I + + E+ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
+ + E + F MI Y + + VF+KM ++ Y P ++ +G
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELH 636
+A ++ ++ + V ML +Y + + LF + +
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 637 LVVSGIYERADRLNDASRIMNRMNHKAI 664
+ Y +AD +M +M I
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGI 449
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 159/343 (46%), Gaps = 5/343 (1%)
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
L + W + L + W+ ++ Y P Y+ ++ + + Q +A LF EM+ G P
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 181 DRYTYSTLIT-HF---GKHGLLDSSLFWLQQMEQ-DNVSGDLVLYSNLIELSRKLGDYSK 235
D Y+ LIT H K L+ +L +M+ + ++V Y+ L+ + G +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
++F L S ++PD+ +N +++ +GK + +E +L MR N PD ++++ L+
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + F + F + +K L T N MI YG+ M+++ + +F M M P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ ++Y ++ +YG A +F + + T N M+ +Y ++ + +A L
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
+ P+A TY + + KA ++ +L +K+ G+
Sbjct: 407 HNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 36/367 (9%)
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD Y+ +I+V GK R A L EM+++G PD Y+ L+ ++ +AL
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 310 FSEMNDA-----KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
D +C ++ T NI++ + Q V++ + LF + + P+V ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
YG++ + E + M+ + +++T+N +I+ YGK E EK + + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P T++++I + KA +D+A +F+K+ + Y+ MI+ Y G V+ A+ +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 485 LHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
E+ D RV +A S M+ +Y RN Y
Sbjct: 371 FEEVGESD---------------RVLKA----------------STLNAMLEVYCRNGLY 399
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQM 604
++F PD++ + A+ K E+ L ++ +G V +
Sbjct: 400 IEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEA 459
Query: 605 LSLYGAR 611
L ++G+R
Sbjct: 460 LEVFGSR 466
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 134/269 (49%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V YN++LR ++ + + LF ++ ++PD YT++ ++ +GK+G++
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M + D++ ++ LI+ K ++ K F L S P L +NSMI +GK
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A++ +A + ++M D P ++Y ++ +Y A +F E+ ++ L +T
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAST 385
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N M++VY + + E D+LF + + P+ +Y L + Y ++++ + L + M+
Sbjct: 386 LNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKME 445
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATN 413
K G+ N + + ++G L + N
Sbjct: 446 KDGIVPNKRFFLEALEVFGSRLPGSGSEN 474
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 178/383 (46%), Gaps = 10/383 (2%)
Query: 119 SLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM-RQRG 177
SL+SR +D + + LD K + F ++ + ++ +W +F M +QR
Sbjct: 73 SLMSRISDREPLVKTLDKY-VKVVRCDHCF---LLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
PD YS LI+ GK G +++ +M+ D +Y+ LI D +KA+
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 238 ----SIFARLKA-SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
++K P+++ YN ++ F ++ + L +++ + V PD +++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ Y N E +V + M +C D+ T N++ID YG+ E+ ++ F S+ +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+P + ++N+++ YG++ + +A +F+ M + +TY MI +YG +A
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ +E+ + A T + ++ ++ + G A LF + V D Y+ + AY
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 473 ERAGLVAHAKRLLHELKRPDNIP 495
+A + + L+ ++++ +P
Sbjct: 429 TKADMKEQVQILMKKMEKDGIVP 451
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 121/285 (42%), Gaps = 9/285 (3%)
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY--- 402
W ++ P+ Y+ L+ V G+ A+ LF M+ G + + YN +I +
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 403 -GKSLEHEKATNLIQEMQN-NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
K+ EK + +M+ QPN +TY+ ++ + ++GK+D+ LF+ L S V
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 461 DQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVF 516
D + ++ AY + G++ + +L ++ +PD I I + + E+ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
+ + E + F MI Y + + VF+KM ++ Y P ++ +G
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLF 621
+A ++ ++ + V ML +Y + + LF
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 194/428 (45%), Gaps = 41/428 (9%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ PS+ +Y +L + KQ+ + E+ Q G D ++ +I F + G ++ ++
Sbjct: 76 HRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAV 135
Query: 203 FWLQQMEQDNVSGDLVLYSNLIE---LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
L +M++ ++ Y+ LI+ ++ K S+ + + + P++ +N ++
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE---MNDA 316
+ K K EA ++++M + GV PDTV+Y+T+ YV V A S E M +
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
P + TC I++ Y + V +G R M++M +E N+V +N+L+ + E
Sbjct: 256 AKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP----------- 425
+ LM++ V+ +V+TY+T++N + + EKA + +EM G++P
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374
Query: 426 -----------------------NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
N + ++T+IS W G +D A +F K+ GV +
Sbjct: 375 YVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
++T++ Y A+ +L ++ P + ++LA A RV T +A A
Sbjct: 435 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINA 494
Query: 523 GEVNDISV 530
+ DI +
Sbjct: 495 LKCKDIEI 502
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 177/421 (42%), Gaps = 78/421 (18%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAY----------------------------------- 255
G +A ++F L + P LI+Y
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL---AIYVDNERFVEALSVFSE 312
N++IN F ++ +A L +M++ G+ P T +Y+TL+ I ER E L + E
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY----- 367
+ ++ T N+++ + + VEE + M + G+ P+ V+YNT+ Y
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 368 ---GESELFG-----------------------------EAIHLFRLMQKKGVQQNVVTY 395
ESE+ + + R M++ V+ N+V +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
N++IN + + ++ + ++ M+ ++ + ITYST+++ W AG +++AA +F+++
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 358
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL---KRPDNIPRETAIMVLARARRVEEA 512
+GV+ D Y + Y RA A+ LL L RP+ + T I +++A
Sbjct: 359 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDA 418
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
VF + G +I F ++ Y K+ EV + MR G P+++ L+ A
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Query: 573 F 573
+
Sbjct: 479 W 479
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 186/415 (44%), Gaps = 53/415 (12%)
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
++NV + EA+ + + + + G P +SY+TLLA +++ S+ SE+ +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
LD N +I+ + + +E+ + M+++G+ P +YNTL++ YG + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 378 HLFRLMQKKG---VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
L LM ++G V N+ T+N ++ + K + E+A ++++M+ G++P+ +TY+TI
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 435 SIWEKAGKLDRAA-------MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
+ + + G+ RA ++ +K + +G V + Y R G V R +
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIV-----VGGYCREGRVRDGLRFVRR 285
Query: 488 LKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
+K RVE ++ VF +IN + +
Sbjct: 286 MKE----------------MRVEA---------------NLVVFNSLINGFVEVMDRDGI 314
Query: 548 VEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSL 607
EV M+E D + V+NA+ EKA ++ ++ G V PD + +L+
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG-VKPDAHAYSILAK 373
Query: 608 -YGARKDFTMVESLFEKL--DSNPNINKKELHLVVSGIYERADRLNDASRIMNRM 659
Y K+ E L E L +S PN+ V+SG ++DA R+ N+M
Sbjct: 374 GYVRAKEPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGS-MDDAMRVFNKM 425
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 9/395 (2%)
Query: 108 NQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
N R L F+VS + + A ALL E N +L +++ + A
Sbjct: 137 NNRLLG--FLVSSFAEKGKLHFATALLLQSFE---VEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELS 227
LFDE + D T++ LI G + +L L M D+V Y+ LI+
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 228 RKLGDYSKAISIFARLKASSI-APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K + +KA +F +K+ S+ +PD++ Y SMI+ + KA REA LL +M G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+++ L+ Y + A + +M C D+ T +ID Y ++ V +G RL+
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M G+ PN +Y+ L+ +A L + K + YN +I+ + K+
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ +A +++EM+ +P+ IT++ +I G++ A +F K+ + G D++
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 467 TMIVAYERAGLVA---HAKRLLHELKRPDNIPRET 498
+++ +AG+ H ++ + + + +P ET
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 175/388 (45%), Gaps = 9/388 (2%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD-SSLFW 204
S + YN++ R++ +A LA +F+ M+ G++P+ L++ F + G L ++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
LQ E V G ++ ++L+ KL A+ +F D +N +I
Sbjct: 162 LQSFE---VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK-CPLDLT 323
+A LL M G PD V+Y+TL+ + + +A +F ++ C D+
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T MI Y + + E L M ++GI P V++N L+ Y ++ A + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
G +VVT+ ++I+ Y + + + L +EM G+ PNA TYS +I+ +L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETA 499
+A L +L S + +Y +I + +AG V A ++ E++ +PD I
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVND 527
I+ R+ EA +F + A G D
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 137/312 (43%), Gaps = 3/312 (0%)
Query: 88 LASISSTQNEQELHAVMSLYNQRQLSIRF--MVSLLSRETDWQRALALLDWINEKALYSP 145
L + + EL VMS + + + ++ + + +A + + ++ SP
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
V Y ++ +A + A L D+M + G+ P T++ L+ + K G + ++
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M D+V +++LI+ ++G S+ ++ + A + P+ Y+ +IN
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+AR LL ++ + P Y+ ++ + + EA + EM KC D T
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
I+I + + E +F M +G P+ ++ ++LL ++ + EA HL ++ +
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI-AR 514
Query: 386 KGVQQNVVTYNT 397
KG NVV T
Sbjct: 515 KGQSNNVVPLET 526
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 43/355 (12%)
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
F+R K + I YN + KA L A + + M+ +GV P+ + LL V
Sbjct: 92 FSRFKLN-IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN----NRLLGFLV- 145
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
S F+E G+LH ++ +E +
Sbjct: 146 --------SSFAEK-------------------GKLHFATA-----LLLQSFEVEGCCMV 173
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
N+LL + + +A+ LF + + T+N +I + EKA L+ M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV-QIDQVLYQTMIVAYERAGLV 478
G +P+ +TY+T+I + K+ +L++A+ +F+ ++S V D V Y +MI Y +AG +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 479 AHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
A LL ++ R P N+ + A+A + A + + + G D+ F +
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
I+ Y R + + ++E+M G FP++ ++++NA KA L Q+
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 9/395 (2%)
Query: 108 NQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
N R L F+VS + + A ALL E N +L +++ + A
Sbjct: 137 NNRLLG--FLVSSFAEKGKLHFATALLLQSFE---VEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 168 GLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELS 227
LFDE + D T++ LI G + +L L M D+V Y+ LI+
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 228 RKLGDYSKAISIFARLKASSI-APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
K + +KA +F +K+ S+ +PD++ Y SMI+ + KA REA LL +M G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
V+++ L+ Y + A + +M C D+ T +ID Y ++ V +G RL+
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
M G+ PN +Y+ L+ +A L + K + YN +I+ + K+
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ +A +++EM+ +P+ IT++ +I G++ A +F K+ + G D++
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 467 TMIVAYERAGLVA---HAKRLLHELKRPDNIPRET 498
+++ +AG+ H ++ + + + +P ET
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 175/388 (45%), Gaps = 9/388 (2%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD-SSLFW 204
S + YN++ R++ +A LA +F+ M+ G++P+ L++ F + G L ++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
LQ E V G ++ ++L+ KL A+ +F D +N +I
Sbjct: 162 LQSFE---VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK-CPLDLT 323
+A LL M G PD V+Y+TL+ + + +A +F ++ C D+
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T MI Y + + E L M ++GI P V++N L+ Y ++ A + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
G +VVT+ ++I+ Y + + + L +EM G+ PNA TYS +I+ +L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETA 499
+A L +L S + +Y +I + +AG V A ++ E++ +PD I
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVND 527
I+ R+ EA +F + A G D
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 137/312 (43%), Gaps = 3/312 (0%)
Query: 88 LASISSTQNEQELHAVMSLYNQRQLSIRF--MVSLLSRETDWQRALALLDWINEKALYSP 145
L + + EL VMS + + + ++ + + +A + + ++ SP
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
V Y ++ +A + A L D+M + G+ P T++ L+ + K G + ++
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M D+V +++LI+ ++G S+ ++ + A + P+ Y+ +IN
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+AR LL ++ + P Y+ ++ + + EA + EM KC D T
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
I+I + + E +F M +G P+ ++ ++LL ++ + EA HL ++ +
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI-AR 514
Query: 386 KGVQQNVVTYNT 397
KG NVV T
Sbjct: 515 KGQSNNVVPLET 526
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 43/355 (12%)
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
F+R K + I YN + KA L A + + M+ +GV P+ + LL V
Sbjct: 92 FSRFKLN-IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN----NRLLGFLV- 145
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
S F+E G+LH ++ +E +
Sbjct: 146 --------SSFAEK-------------------GKLHFATA-----LLLQSFEVEGCCMV 173
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
N+LL + + +A+ LF + + T+N +I + EKA L+ M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV-QIDQVLYQTMIVAYERAGLV 478
G +P+ +TY+T+I + K+ +L++A+ +F+ ++S V D V Y +MI Y +AG +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 479 AHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
A LL ++ R P N+ + A+A + A + + + G D+ F +
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
I+ Y R + + ++E+M G FP++ ++++NA KA L Q+
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 176/379 (46%), Gaps = 16/379 (4%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ L T W + +LD A + +V+ +N+++ + A +FDE+ +R
Sbjct: 215 MMKLNPTGTIWGFYMEILD-----AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
L P +++TLI + K G LD QME+ D+ YS LI K A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 237 ISIFARLKASSIAPDLIAYNSMINVF---GKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
+F + + P+ + + ++I+ G+ L +E+ Q+M G+ PD V Y+TL
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES---YQKMLSKGLQPDIVLYNTL 386
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ + N V A ++ M D T +ID + + VE + M + GI
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
E + V ++ L+ + +A R M + G++ + VTY M++ + K + +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L++EMQ++G P+ +TY+ +++ K G++ A ML + + GV D + Y T++ +
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHH 566
Query: 474 RAGLVAHAKRLLHELKRPD 492
R HA +++P+
Sbjct: 567 R-----HANSSKRYIQKPE 580
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 3/304 (0%)
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
EK+ P VF Y+ ++ + + + AHGLFDEM +RGL P+ ++TLI ++G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 199 DSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
D Q+M + D+VLY+ L+ K GD A +I + + PD I Y ++
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I+ F + A + +EM NG+ D V +S L+ R ++A EM A
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
D T +M+D + + + G +L M+ G P+VV+YN LL + A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L M GV + +TYNT++ + + H ++ + GI + +Y +I++ +
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHHR---HANSSKRYIQKPEIGIVADLASYKSIVNELD 598
Query: 439 KAGK 442
+A K
Sbjct: 599 RASK 602
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 167/349 (47%), Gaps = 10/349 (2%)
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD 280
NL++ KL + + + ++ +N ++N F K +A+ + E+
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 281 NGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEE 340
+ P VS++TL+ Y E + +M ++ D+ T + +I+ + + ++
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 341 GDRLFWSMRKMGIEPNVVSYNTLLRVY---GESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
LF M K G+ PN V + TL+ + GE +L E+ ++ M KG+Q ++V YNT
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES---YQKMLSKGLQPDIVLYNT 385
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
++N + K+ + A N++ M G++P+ ITY+T+I + + G ++ A + +++ +G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEAT 513
+++D+V + ++ + G V A+R L E+ R PD++ + + +
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 514 WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
+ ++ + G V + + ++N + + N + + M +G PD
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 167/359 (46%), Gaps = 4/359 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+++ +E + A + D I +++L P+V ++N ++ + L +M +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSL-QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
PD +TYS LI K +D + +M + + + V+++ LI + G+
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ ++ + + PD++ YN+++N F K AR ++ M G+ PD ++Y+TL+
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ AL + EM+ LD + ++ + V + +R M + GI+P+
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V+Y ++ + + L + MQ G +VVTYN ++N K + + A L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
M N G+ P+ ITY+T++ E + ++ + + G+ D Y++++ +RA
Sbjct: 545 AMLNIGVVPDDITYNTLL---EGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRA 600
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 5/300 (1%)
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+ E+ DA PL++ NI+++ + + + + ++F + K ++P VVS+NTL+ Y +
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
E L M+K + +V TY+ +IN K + + A L EM G+ PN +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL- 488
++T+I + G++D +QK+ S G+Q D VLY T++ + + G + A+ ++ +
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 489 ---KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
RPD I T I R VE A + ++ G D F ++ + +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+ +M G PD ++++AF K + + L ++ +G V P V + +L
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVL 526
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 141/332 (42%), Gaps = 9/332 (2%)
Query: 344 LFWSMRKMGIEPNV-VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
+F S+ +M + P + L+ Y + +AI FRL +K + +++
Sbjct: 156 VFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRM 215
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
K E+ + G N ++ +++ + K G + A +F ++ +Q
Sbjct: 216 MKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTV 275
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQ 518
V + T+I Y + G + RL H+++ RPD I L + +++ A +F +
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
G + + +F +I+ +SRN + + E ++KM G PD + ++N F K +
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 579 FEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNP-NINKKELH 636
A + + G + PD++ + ++ + D + +++D N +++
Sbjct: 396 LVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS 454
Query: 637 LVVSGIYERADRLNDASRIMNRMNHKAIGNHD 668
+V G+ + R+ DA R + M I D
Sbjct: 455 ALVCGMCKEG-RVIDAERALREMLRAGIKPDD 485
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 200/475 (42%), Gaps = 46/475 (9%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ PSV N+VL+ + ++ + A +++ M + G+ P T++T+ LDS
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM---------LDSCF 249
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
K GD + I+ +K +I + YN +IN F
Sbjct: 250 --------------------------KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGF 283
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K EAR +MR +G S++ L+ Y F +A V EM +A
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+T NI I +++ L SM P+VVSYNTL+ Y + F EA LF
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
++ + ++VTYNT+I+ +S E A L +EM I P+ ITY+T++ + K G
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL-----KRPDNIPRE 497
L A ++ ++ G++ D Y T V R G A RL E+ PD
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
I L + + +A R+ F G V D + +I Y N ++ ++++M
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 558 GYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARK 612
+P +++ K E+A +++ G V P+ + L LYG K
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG-VRPNVMTHNAL-LYGMCK 632
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 197/456 (43%), Gaps = 15/456 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V +N +L + +A ++ EM++R + TY+ LI F K+G ++ + +
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
M + + ++ LIE K G + A + + + I P YN I
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+AR LL M PD VSY+TL+ Y+ +FVEA +F ++ + T
Sbjct: 356 FGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +ID + +E RL M I P+V++Y TL++ + ++ A ++ M
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAITYSTIISIWEKAGKL 443
+KG++ + Y T + + +KA L +EM + P+ Y+ I K G L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+A +K+ G+ D V Y T+I Y G A+ L E+ R P VL
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 504 ----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFE---KMRE 556
A+A R+E+A + G ++ + LY K N+ E + KM E
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL--LYGMCKA-GNIDEAYRYLCKMEE 648
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
G P+ ++++ ++E+ LY ++ D+
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 175/362 (48%), Gaps = 22/362 (6%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
++ + +++N ++ + + A G+ DEM G+ P TY+ I G +D +
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L M + D+V Y+ L+ K+G + +A +F L+A I P ++ YN++I+
Sbjct: 364 ELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD- 321
++ A+ L +EM + PD ++Y+TL+ +V N A V+ EM D
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 322 --LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE----PNVVSYNTLLRVYGESEL--F 373
TT + G+L + + D+ F +M P++ YN +R+ G ++
Sbjct: 480 YAYTTRAV-----GELRL-GDSDKAFRLHEEMVATDHHAPDLTIYN--VRIDGLCKVGNL 531
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
+AI R + + G+ + VTY T+I Y ++ + + A NL EM + P+ ITY +
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
I KAG+L++A +++ GV+ + + + ++ +AG + A R L +++ +
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE-EG 650
Query: 494 IP 495
IP
Sbjct: 651 IP 652
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 143/296 (48%), Gaps = 1/296 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS+ YN ++ + + A L +EM + + PD TY+TL+ F K+G L +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI-APDLIAYNSMINVFG 263
+M + + D Y+ +LGD KA + + A+ APDL YN I+
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K +A +++ G+ PD V+Y+T++ Y++N +F A +++ EM + +
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T ++I + + +E+ + M+K G+ PNV+++N LL ++ EA M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
+++G+ N +Y +I+ + E+ L +EM + I+P+ T+ + EK
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 14/357 (3%)
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
V+ K + + L ++M G P + + +L + D+ +A +V+ M +
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
+ T N M+D + +E D+++ M++ IE + V+YN L+ + ++ EA
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M++ G ++N +I Y K + A + EM N GI P TY+ I
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G++D A ++L SS D V Y T++ Y + G A L +L+ P +
Sbjct: 357 GRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
T I L + +E A + + D+ + ++ + +N + EV+++M
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKD 613
G PD A A G+LR + A ++H+E + + H L++Y R D
Sbjct: 473 KGIKPDG--YAYTTRAVGELRLGDSDKAF--RLHEE--MVATDHHAPDLTIYNVRID 523
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
++ A L D + K LY PSV Y V++ +A + A EM++RG+ P+ T++
Sbjct: 566 FKMARNLYDEMLRKRLY-PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
L+ K G +D + +L +ME++ + + Y+ LI + + + + ++ +
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLL 274
I PD + ++ K RE L
Sbjct: 685 EIEPDGYTHRALFKHLEKDHESREVEFL 712
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 152/322 (47%), Gaps = 5/322 (1%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
A ++ R L W L H MR + P T++ + + G D ++
Sbjct: 96 LAIDIAARLHLHPTVWSLIH----RMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 151
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
M + DL ++ ++++ K KA +F L+ + D + YN ++N + K
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
+A +L+EM + G+ P+ +Y+T+L + + A F EM C +D+ T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
++ +G ++ +F M + G+ P+V +YN +++V + + A+ +F M ++G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+ NV TYN +I + E + L+Q M+N G +PN TY+ +I + + ++++A
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 448 MLFQKLRSSGVQIDQVLYQTMI 469
LF+K+ S + Y +I
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILI 412
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 5/295 (1%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
G KA+ +F + DL ++N++++V K+K +A L + +R DTV+Y
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTY 198
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+ +L + +R +AL V EM + +LTT N M+ + + + F M+K
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
E +VV+Y T++ +G + A ++F M ++GV +V TYN MI + K E
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A + +EM G +PN TY+ +I AG+ R L Q++ + G + + Y MI
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA----RRVEEATWVFRQAFA 521
Y V A L ++ D +P +L +R E+ QAFA
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFA 433
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 156/332 (46%), Gaps = 10/332 (3%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D ++ ++ ID+ +LH+ L MR + I P+ ++ + Y + +A+ LF
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
M + G Q++ ++NT++++ KS EKA L + ++ + +TY+ I++ W
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN----IPR 496
+ +A + +++ G+ + Y TM+ + RAG + HA E+K+ D +
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
T + A ++ A VF + G + ++ + MI + + N V +FE+M
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM 616
GY P+ +++ EF + + L ++ +EGC + + M+ Y +
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 617 VESLFEKLDSN---PNINKKELHLVVSGIYER 645
LFEK+ S PN++ ++++SG++ R
Sbjct: 389 ALGLFEKMGSGDCLPNLDT--YNILISGMFVR 418
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 3/292 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
SP FA +V A + A LF M + G D +++T++ K ++ + +
Sbjct: 125 SPKTFA--IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA-Y 181
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
L + + S D V Y+ ++ + KA+ + + I P+L YN+M+ F
Sbjct: 182 ELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+A R A EM+ D V+Y+T++ + A +VF EM +
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T N MI V + VE +F M + G EPNV +YN L+R + F L + M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
+ +G + N TYN MI Y + E EKA L ++M + PN TY+ +IS
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
+ +S YNV+L K+ A + EM +RG+ P+ TY+T++ F + G +
Sbjct: 188 RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIR 247
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
+ + +M++ + D+V Y+ ++ G+ +A ++F + + P + YN+MI
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
V K A ++ +EM G P+ +Y+ L+ F + M + C
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+ T N+MI Y + VE+ LF M PN+ +YN L+
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 191/417 (45%), Gaps = 10/417 (2%)
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVF 310
D + Y SM+ V K KL + +R +L M+ G+ ++S ++ Y + +AL V
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 311 SEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES 370
+ M A +L CN IDV+ + + +E+ R M+ +GI PNVV+YN ++R Y +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 371 ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAIT 429
EAI L M KG + V+Y T++ K + +L+++M + +G+ P+ +T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL- 488
Y+T+I + K D A + + G +ID++ Y ++ A + G ++ AK L++E+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 489 ----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
PD + + R V++A + + G + + ++N R K
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQM 604
E+ E + P+S +++++ + + +A + ++ +G FP V +
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG-FFPGPVEINL 564
Query: 605 LSLYGARKDFTMVESLF--EKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRM 659
L R T F E L+ IN V+ G + D L+ A +++ M
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN-DELDAALSVLDDM 620
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/559 (20%), Positives = 237/559 (42%), Gaps = 72/559 (12%)
Query: 110 RQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
R L + ++L + D + AL W + + Y Y +L + + K + +
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRV 229
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
M++RG+ +S ++ + + G L +L L M++ V +L++ + I++ +
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
KA+ R++ I P+++ YN MI + EA LL++M G PD VS
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y T++ +R VE + +M +
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKM----------------------------------AK 375
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ G+ P+ V+YNTL+ + + + EA+ + Q+KG + + + Y+ +++ K
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 410 KATNLIQEMQNNG-IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+A +LI EM + G P+ +TY+ +++ + + G++D+A L Q + + G + + V Y +
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ R G A+ +++ EE W N I
Sbjct: 496 LNGMCRTGKSLEAREMMN---------------------MSEEHWW---------SPNSI 525
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ + +++ R K + +V +M G+FP I L+L + + +A +
Sbjct: 526 T-YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 589 IHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYE---R 645
++GC + V+F + ++G ++ + ++ LD INK + + + +
Sbjct: 585 CLNKGCAI-NVVNFTTV-IHGFCQNDEL-DAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 646 ADRLNDASRIMNRMNHKAI 664
R+ +A+ +M +M HK I
Sbjct: 642 KGRIAEATELMKKMLHKGI 660
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 4/332 (1%)
Query: 111 QLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
+L +V L +E A L++ + K P V Y V+ R + A L
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKL 230
M G P+ +Y+ L+ + G + + E+ S + + YS ++ R+
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
G S+A + + P + N ++ + EAR ++E + G + V++
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+T++ + N+ ALSV +M D+ T ++D G+ + E L M
Sbjct: 598 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 657
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT-YNTMINIYGKSLEHE 409
GI+P V+Y T++ Y + G+ L +++K +Q T YN +I + E
Sbjct: 658 KGIDPTPVTYRTVIHRYCQ---MGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLE 714
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
+A L+ ++ + +A T ++ + K G
Sbjct: 715 EADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 216/476 (45%), Gaps = 62/476 (13%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ PS+ +Y +L + KQ+ + E+ Q G D ++ +I F + G ++ ++
Sbjct: 76 HRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAV 135
Query: 203 FWLQQMEQDNVSGDLVLYSNLIE---LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
L +M++ ++ Y+ LI+ ++ K S+ + + + P++ +N ++
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE---MNDA 316
+ K K EA ++++M + GV PDTV+Y+T+ YV V A S E M +
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
P + TC I++ Y + V +G R M++M +E N+V +N+L+ + E
Sbjct: 256 AKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE------- 307
Query: 377 IHLFRLMQKKGVQQNVVT-----YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYS 431
+M + G+ + +T +N + + G + L++E ++ + ITYS
Sbjct: 308 -----VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECN---VKADVITYS 359
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 491
T+++ W AG +++AA +F+++ +GV+ D Y + Y RA A+ LL L
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL--- 416
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+V +R ++ +F +I+ + N + + VF
Sbjct: 417 ---------IVESRP--------------------NVVIFTTVISGWCSNGSMDDAMRVF 447
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC-VFPDEVHFQMLS 606
KM + G P+ ++ + ++++ KA+ + + GC V P+ F +L+
Sbjct: 448 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR--GCGVKPENSTFLLLA 501
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 191/425 (44%), Gaps = 48/425 (11%)
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
++NV + EA+ + + + + G P +SY+TLLA +++ S+ SE+ +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
LD N +I+ + + +E+ + M+++G+ P +YNTL++ YG + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 378 HLFRLMQKKG---VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
L LM ++G V N+ T+N ++ + K + E+A ++++M+ G++P+ +TY+TI
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 435 SIWEKAGKLDRAA-------MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
+ + + G+ RA ++ +K + +G V + Y R G V R +
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIV-----VGGYCREGRVRDGLRFVRR 285
Query: 488 LKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA-GEVND---ISVFGCMINLYSRNKK 543
+K RVE VF EV D I + L S N++
Sbjct: 286 MKE----------------MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEE 329
Query: 544 YTNV------VEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
V V+V M+E D + V+NA+ EKA ++ ++ G V P
Sbjct: 330 VELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG-VKP 388
Query: 598 DEVHFQMLSL-YGARKDFTMVESLFEKL--DSNPNINKKELHLVVSGIYERADRLNDASR 654
D + +L+ Y K+ E L E L +S PN+ V+SG ++DA R
Sbjct: 389 DAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVI--FTTVISGWCSNGS-MDDAMR 445
Query: 655 IMNRM 659
+ N+M
Sbjct: 446 VFNKM 450
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 185/388 (47%), Gaps = 13/388 (3%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L R D R L+ ++E + P V +++ + ++++ A +F++MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
Query: 177 G------LAPDRYTYSTLITHFGKHGLLDSSLFWLQQME-QDNVSGDLVLYSNLIELSRK 229
+ D ++TLI K G L + L +M+ ++ + + V Y+ LI+ +
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCR 418
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
G A + +R+K I P+++ N+++ + A + +M GV + V+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y TL+ +A+ + +M +A C D +I Q+ + R+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ G ++++YN L+ ++ + + + M+K+G + + +TYNT+I+ +GK + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR-SSGVQIDQVLYQTM 468
++++M+ +G+ P TY +I + G+LD A LF+ + S V + V+Y +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 469 IVAYERAGLVAHAKRLLHELK----RPD 492
I A+ + G A L E+K RP+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPN 686
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 159/332 (47%), Gaps = 4/332 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+P+ YN ++ RA + A + M++ + P+ T +T++ +H L+ ++
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ ME++ V G++V Y LI + + KA+ + ++ + +PD Y ++I+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ + +A +++++++ G D ++Y+ L+ ++ D + + ++M D
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI 582
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T N +I +G+ E +R+ MR+ G++P V +Y ++ Y EA+ LF+ M
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 384 Q-KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
V N V YN +IN + K +A +L +EM+ ++PN TY+ + + +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ L ++ + +Q+ TM + ER
Sbjct: 703 GETLLKLMDEMVEQSCEPNQI---TMEILMER 731
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 202/480 (42%), Gaps = 62/480 (12%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQD-------NVSGDLVLYS 221
L++ +++ + + LI FG+ G+++ S+ ++++ + NV D++L +
Sbjct: 139 LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRN 198
Query: 222 NLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL--LLQEMR 279
L++ + K+ D K S P+ I + +++ K +L E ++ L+
Sbjct: 199 GLVDDAFKVLDEMLQ-------KESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFS 251
Query: 280 DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
+GV P++V + ++ N R A + S++ K PL+ N ++ G+ +
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 340 EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ--------- 390
+ L M ++ I P+VV+ L+ +S EA+ +F M+ K
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 391 ---------------------------------NVVTYNTMINIYGKSLEHEKATNLIQE 417
N VTYN +I+ Y ++ + E A ++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 418 MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGL 477
M+ + I+PN +T +TI+ + L+ A + F + GV+ + V Y T+I A
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 478 VAHA----KRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGC 533
V A +++L PD I L + RR +A V + G D+ +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 534 MINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+I L+ V E+ M + G PDS +++ FGK ++FE + + Q+ ++G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 184/410 (44%), Gaps = 25/410 (6%)
Query: 97 EQELHAVMSLYNQRQLS------IRFMVSLLSRETDWQRALALLDWI-----NEKALYSP 145
E+++ A++S ++ +S RF+ SL RA A D + N+ L +P
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKN----ARANAAWDILSDLMKNKTPLEAP 295
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+N +L + R + L +M + + PD T LI K +D +L
Sbjct: 296 ---PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 206 QQM------EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS-IAPDLIAYNSM 258
++M + + + D + ++ LI+ K+G +A + R+K AP+ + YN +
Sbjct: 353 EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCL 412
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I+ + +A A+ ++ M+++ + P+ V+ +T++ + A+ F +M
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
++ T +I + VE+ + M + G P+ Y L+ + +AI
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+ +++ G +++ YN +I ++ EK ++ +M+ G +P++ITY+T+IS +
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
K + + +++R G+ Y +I AY G + A +L ++
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 7/262 (2%)
Query: 156 NVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG 215
NV +A W +++M + G +PD Y LI+ + ++ ++++++ S
Sbjct: 491 NVEKAMYW------YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
DL+ Y+ LI L + K + ++ PD I YN++I+ FGK K F ++
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN-DAKCPLDLTTCNIMIDVYGQ 334
++MR++G+ P +Y ++ Y EAL +F +M +K + NI+I+ + +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
L + L M+ + PNV +YN L + E + L M ++ + N +T
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 395 YNTMINIYGKSLEHEKATNLIQ 416
++ S E K +Q
Sbjct: 725 MEILMERLSGSDELVKLRKFMQ 746
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+S + AYN+++ + + +M + G PD TY+TLI+ FGKH +S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA-SSIAPDLIAYNSMINV 261
++QM +D + + Y +I+ +G+ +A+ +F + S + P+ + YN +IN
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
F K F +A L +EM+ V P+ +Y+ L + + L + EM + C +
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 322 LTTCNIMID 330
T I+++
Sbjct: 722 QITMEILME 730
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/447 (19%), Positives = 182/447 (40%), Gaps = 60/447 (13%)
Query: 225 ELSRKLGDYSKAISIFARLKASSIA----------------------PD----------- 251
+++R+LG YS AIS F L A S + PD
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 252 ---------LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
++A N +I FG+ + ++ L+ + + N ++ + ++ + + N
Sbjct: 143 AKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGL 200
Query: 303 FVEALSVFSEM--NDAKCPLDLTTCNIMI-DVY-GQLHMVEEGDRLFWSMRKMGIEPNVV 358
+A V EM ++ P + T +I++ +V+ G+L E+ L G+ PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
+ ++ A + + K +N +++ G++++ + +L+ +M
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG------VQIDQVLYQTMIVAY 472
I+P+ +T +I+ K+ ++D A +F+K+R ++ D + + T+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 473 ERAGLVAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
+ G + A+ LL +K P+ + I RA ++E A V + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
+ ++ R+ V F M + G + +++A + EKA Y
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 588 QIHDEGCVFPDEVHFQMLS-LYGARKD 613
++ + GC ++++ ++S L R+D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRD 527
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 236/495 (47%), Gaps = 34/495 (6%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDS-----SLF 203
A+N ++ ++ + A LF +MR++G+ P R T ST ++ G ++ ++
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ ME DN+ G ++L+ K+G A +F R+ D++ +N +I+ +
Sbjct: 301 IVNGMELDNILG-----TSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYV 351
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ L +A + Q MR + D V+ +TL++ E V D+
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+ ++D+Y + + + ++F S +E +++ +NTLL Y ES L GEA+ LF M
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
Q +GV NV+T+N +I ++ + ++A ++ +MQ++GI PN I+++T+++ + G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVA--HAKRLLH-----ELKRPDNIPR 496
+ A + +K++ SG++ + ++ VA +A H R +H L+ +
Sbjct: 528 EEAILFLRKMQESGLRPNAF---SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 497 ETAIM-VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
ET+++ + A+ + +A VF +++ + MI+ Y+ + ++ +
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKL----YSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDF 614
VG PD+ I VL+A + +A +++ I + + P H+ M+ L + +
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 615 TMVESLFEKLDSNPN 629
L E++ P+
Sbjct: 701 EKALRLIEEMPFKPD 715
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 146/343 (42%), Gaps = 18/343 (5%)
Query: 179 APDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAIS 238
+P +Y ++ K+G + +L + +M+ N+ +Y +++ D S
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 239 IFARLKASSIAPDLIAYNSMINV-----FGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
I AR+ + D A N I + K A +L ++R V S++ +
Sbjct: 92 IHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNV----FSWAAI 144
Query: 294 LAIYVDNERFVEALSVFSEMNDAKC-PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+ + AL F EM + + P + N+ G L G + + K G
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV-CKACGALKWSRFGRGVHGYVVKSG 203
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
+E V ++L +YG+ + +A +F + + N V +N ++ Y ++ ++E+A
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAI 259
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L +M+ G++P +T ST +S G ++ +G+++D +L +++ Y
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWV 515
+ GL+ +A+ + + D + I + VE+A ++
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 178/382 (46%), Gaps = 7/382 (1%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
DW+ AL +L W + S AY++ + + +AK+W + MR L T
Sbjct: 100 DWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTV 158
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+ ++ F G + ++ ++ + + + + L++ K +A + +LK
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK- 217
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
S I P+ +N I+ + KA EA +QEM+ +G P +SY+T++ Y F++
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 306 ALSVFSEMN-DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+ SEM + P +T IM + Q EE R+ M++ G +P+ + YN L+
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF-EEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 365 RVYGESELFGEAIHLFRL-MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ-NNG 422
+ EA +FR+ M + GV N TYN+MI +Y E +KA L++EM+ +N
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 423 IQPNAITYSTII-SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
P+ TY ++ S +++ ++ +L + + + +D+ Y +I RA + A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 482 KRLLHELKRPDNIPRETAIMVL 503
L E+ D PR ++L
Sbjct: 457 YCLFEEMISQDITPRHRTCLLL 478
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 168/383 (43%), Gaps = 45/383 (11%)
Query: 181 DRYTYSTLITHF--GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE--LSRKLGDYSKA 236
D Y+ S I + G+ G DS +++ D + + L L+ L R D+ A
Sbjct: 45 DEYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSA 104
Query: 237 ISIFA---RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR-DNGVCPDTVSYST 292
+ I K + D AY+ +++ GKAK + + ++ MR D V +TV+
Sbjct: 105 LGILKWAESCKGHKHSSD--AYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--K 160
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + + EA+ +F + + + + N+++D + VE+ R+ K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSH 219
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I PN ++N + + ++ EA+ + M+ G + V++Y T+I Y + E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
++ EM+ NG PN+ITY+TI+S + + A + +++ SG + D + Y +I
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI--- 336
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN-DISVF 531
LARA R+EEA VFR V+ + S +
Sbjct: 337 ----------------------------HTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 532 GCMINLYSRNKKYTNVVEVFEKM 554
MI +Y + + +E+ ++M
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEM 391
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK---AGK 442
KG + + Y+ ++I GK+ + ++ ++ M+ + + +T +T+ I + AG+
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL----VTLNTVAKIMRRFAGAGE 170
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR---PDNIPRETA 499
+ A +F +L G++ + ++ + V A+ +L +LK P+
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIF 230
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I +A RVEEA W ++ G + + +I Y + ++ V E+ +M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
P+S ++++ +EFE+A + +++ GC PD + + L
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK-PDSLFYNCL 335
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 178/382 (46%), Gaps = 7/382 (1%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
DW+ AL +L W + S AY++ + + +AK+W + MR L T
Sbjct: 100 DWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTV 158
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+ ++ F G + ++ ++ + + + + L++ K +A + +LK
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK- 217
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
S I P+ +N I+ + KA EA +QEM+ +G P +SY+T++ Y F++
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 306 ALSVFSEMN-DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+ SEM + P +T IM + Q EE R+ M++ G +P+ + YN L+
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF-EEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 365 RVYGESELFGEAIHLFRL-MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ-NNG 422
+ EA +FR+ M + GV N TYN+MI +Y E +KA L++EM+ +N
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 423 IQPNAITYSTII-SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
P+ TY ++ S +++ ++ +L + + + +D+ Y +I RA + A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 482 KRLLHELKRPDNIPRETAIMVL 503
L E+ D PR ++L
Sbjct: 457 YCLFEEMISQDITPRHRTCLLL 478
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 168/383 (43%), Gaps = 45/383 (11%)
Query: 181 DRYTYSTLITHF--GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE--LSRKLGDYSKA 236
D Y+ S I + G+ G DS +++ D + + L L+ L R D+ A
Sbjct: 45 DEYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSA 104
Query: 237 ISIFA---RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR-DNGVCPDTVSYST 292
+ I K + D AY+ +++ GKAK + + ++ MR D V +TV+
Sbjct: 105 LGILKWAESCKGHKHSSD--AYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--K 160
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + + EA+ +F + + + + N+++D + VE+ R+ K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSH 219
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I PN ++N + + ++ EA+ + M+ G + V++Y T+I Y + E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
++ EM+ NG PN+ITY+TI+S + + A + +++ SG + D + Y +I
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI--- 336
Query: 473 ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN-DISVF 531
LARA R+EEA VFR V+ + S +
Sbjct: 337 ----------------------------HTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 532 GCMINLYSRNKKYTNVVEVFEKM 554
MI +Y + + +E+ ++M
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEM 391
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK---AGK 442
KG + + Y+ ++I GK+ + ++ ++ M+ + + +T +T+ I + AG+
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL----VTLNTVAKIMRRFAGAGE 170
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR---PDNIPRETA 499
+ A +F +L G++ + ++ + V A+ +L +LK P+
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIF 230
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
I +A RVEEA W ++ G + + +I Y + ++ V E+ +M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
P+S ++++ +EFE+A + +++ GC PD + + L
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK-PDSLFYNCL 335
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 184/388 (47%), Gaps = 13/388 (3%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L R D R L+ ++E + P V +++ + ++++ A +F++MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEALEVFEQMRGK 358
Query: 177 G------LAPDRYTYSTLITHFGKHGLLDSSLFWLQQME-QDNVSGDLVLYSNLIELSRK 229
+ D ++TLI K G L + L +M+ ++ + V Y+ LI+ +
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
G A + +R+K I P+++ N+++ + A + +M GV + V+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y TL+ +A+ + +M +A C D +I Q+ + R+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ G ++++YN L+ ++ + + + M+K+G + + +TYNT+I+ +GK + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR-SSGVQIDQVLYQTM 468
++++M+ +G+ P TY +I + G+LD A LF+ + S V + V+Y +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 469 IVAYERAGLVAHAKRLLHELK----RPD 492
I A+ + G A L E+K RP+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPN 686
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ YN ++ RA + A + M++ + P+ T +T++ +H L+ ++ +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
ME++ V G++V Y LI + + KA+ + ++ + +PD Y ++I+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ +A +++++++ G D ++Y+ L+ ++ D + + ++M D T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +I +G+ E +R+ MR+ G++P V +Y ++ Y EA+ LF+ M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 385 -KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
V N V YN +IN + K +A +L +EM+ ++PN TY+ +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 194/461 (42%), Gaps = 62/461 (13%)
Query: 188 LITHFGKHGLLDSSLFWLQQMEQD-------NVSGDLVLYSNLIELSRKLGDYSKAISIF 240
LI FG+ G+++ S+ ++++ + NV D++L + L++ + K+ D
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ---- 213
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARL--LLQEMRDNGVCPDTVSYSTLLAIYV 298
K S P+ I + +++ K +L E ++ L+ +GV P++V + ++
Sbjct: 214 ---KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLC 270
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
N R A + S++ K PL+ N ++ G+ + + L M ++ I P+VV
Sbjct: 271 KNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ---------------------------- 390
+ L+ +S EA+ +F M+ K
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 391 --------------NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
N VTYN +I+ Y ++ + E A ++ M+ + I+PN +T +TI+
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPD 492
+ L+ A + F + GV+ + V Y T+I A V A +++L PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 493 NIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFE 552
I L + RR +A V + G D+ + +I L+ V E+
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 553 KMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
M + G PDS +++ FGK ++FE + + Q+ ++G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+V N ++ + R ++A F +M + G+ + TY TLI ++ +++W
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++M + S D +Y LI ++ AI + +LK + DL+AYN +I +F
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ +L +M G PD+++Y+TL++ + ++ F + +M + +TT
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMG----IEPNVVSYNTLLRVYGESELFGEAIHLF 380
+ID Y + ++E +LF + MG + PN V YN L+ + + FG+A+ L
Sbjct: 619 YGAVIDAYCSVGELDEALKLF---KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
M+ K V+ NV TYN + + + E L+ EM
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 182/408 (44%), Gaps = 21/408 (5%)
Query: 97 EQELHAVMSLYNQRQLS------IRFMVSLLSR---ETDWQRALALLDWINEKALYSPSV 147
E+++ A++S ++ +S RF+ SL T W L+ N+ L +P
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK--NKTPLEAP-- 295
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
+N +L + R + L +M + + PD T LI K +D +L +Q
Sbjct: 296 -PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 208 M------EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS-IAPDLIAYNSMIN 260
M + + + D + ++ LI+ K+G +A + R+K P+ + YN +I+
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
+ +A A+ ++ M+++ + P+ V+ +T++ + A+ F +M
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
++ T +I + VE+ + M + G P+ Y L+ + +AI +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+++ G +++ YN +I ++ EK ++ +M+ G +P++ITY+T+IS + K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+ + +++R G+ Y +I AY G + A +L ++
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/447 (18%), Positives = 180/447 (40%), Gaps = 60/447 (13%)
Query: 225 ELSRKLGDYSKAISIFARLKASSIA----------------------PD----------- 251
+++R+LG YS AIS F L A S + PD
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 252 ---------LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
++A +I FG+ + ++ L+ + + N ++ + ++ + + N
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGL 200
Query: 303 FVEALSVFSEM--NDAKCPLDLTTCNIMI-DVYGQLHMVEEG-DRLFWSMRKMGIEPNVV 358
+A V EM ++ P + T +I++ +V+ + + EE L G+ PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
+ ++ A + + K +N +++ G++++ + +L+ +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG------VQIDQVLYQTMIVAY 472
I+P+ +T +I+ K+ ++D A +F+++R ++ D + + T+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 473 ERAGLVAHAKRLLHELKR-----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
+ G + A+ LL +K P+ + I RA ++E A V + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
+ ++ R+ V F M + G + +++A + EKA Y
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 588 QIHDEGCVFPDEVHFQMLS-LYGARKD 613
++ + GC ++++ ++S L R+D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRD 527
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 184/388 (47%), Gaps = 13/388 (3%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L R D R L+ ++E + P V +++ + ++++ A +F++MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEALEVFEQMRGK 358
Query: 177 G------LAPDRYTYSTLITHFGKHGLLDSSLFWLQQME-QDNVSGDLVLYSNLIELSRK 229
+ D ++TLI K G L + L +M+ ++ + V Y+ LI+ +
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
G A + +R+K I P+++ N+++ + A + +M GV + V+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y TL+ +A+ + +M +A C D +I Q+ + R+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ G ++++YN L+ ++ + + + M+K+G + + +TYNT+I+ +GK + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR-SSGVQIDQVLYQTM 468
++++M+ +G+ P TY +I + G+LD A LF+ + S V + V+Y +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 469 IVAYERAGLVAHAKRLLHELK----RPD 492
I A+ + G A L E+K RP+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPN 686
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 158/331 (47%), Gaps = 4/331 (1%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ YN ++ RA + A + M++ + P+ T +T++ +H L+ ++ +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
ME++ V G++V Y LI + + KA+ + ++ + +PD Y ++I+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ +A +++++++ G D ++Y+ L+ ++ D + + ++M D T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +I +G+ E +R+ MR+ G++P V +Y ++ Y EA+ LF+ M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 385 -KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
V N V YN +IN + K +A +L +EM+ ++PN TY+ + + +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ L ++ + +Q+ TM + ER
Sbjct: 704 ETLLKLMDEMVEQSCEPNQI---TMEILMER 731
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 194/461 (42%), Gaps = 62/461 (13%)
Query: 188 LITHFGKHGLLDSSLFWLQQMEQD-------NVSGDLVLYSNLIELSRKLGDYSKAISIF 240
LI FG+ G+++ S+ ++++ + NV D++L + L++ + K+ D
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ---- 213
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARL--LLQEMRDNGVCPDTVSYSTLLAIYV 298
K S P+ I + +++ K +L E ++ L+ +GV P++V + ++
Sbjct: 214 ---KESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLC 270
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
N R A + S++ K PL+ N ++ G+ + + L M ++ I P+VV
Sbjct: 271 KNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ---------------------------- 390
+ L+ +S EA+ +F M+ K
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 391 --------------NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
N VTYN +I+ Y ++ + E A ++ M+ + I+PN +T +TI+
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPD 492
+ L+ A + F + GV+ + V Y T+I A V A +++L PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 493 NIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFE 552
I L + RR +A V + G D+ + +I L+ V E+
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 553 KMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
M + G PDS +++ FGK ++FE + + Q+ ++G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 182/408 (44%), Gaps = 21/408 (5%)
Query: 97 EQELHAVMSLYNQRQLS------IRFMVSLLSR---ETDWQRALALLDWINEKALYSPSV 147
E+++ A++S ++ +S RF+ SL T W L+ N+ L +P
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK--NKTPLEAP-- 295
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
+N +L + R + L +M + + PD T LI K +D +L +Q
Sbjct: 296 -PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 208 M------EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS-IAPDLIAYNSMIN 260
M + + + D + ++ LI+ K+G +A + R+K P+ + YN +I+
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
+ +A A+ ++ M+++ + P+ V+ +T++ + A+ F +M
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
++ T +I + VE+ + M + G P+ Y L+ + +AI +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+++ G +++ YN +I ++ EK ++ +M+ G +P++ITY+T+IS + K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+ + +++R G+ Y +I AY G + A +L ++
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 7/262 (2%)
Query: 156 NVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG 215
NV +A W +++M + G +PD Y LI+ + ++ ++++++ S
Sbjct: 491 NVEKAMYW------YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
DL+ Y+ LI L + K + ++ PD I YN++I+ FGK K F ++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN-DAKCPLDLTTCNIMIDVYGQ 334
++MR++G+ P +Y ++ Y EAL +F +M +K + NI+I+ + +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
L + L M+ + PNV +YN L + E + L M ++ + N +T
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 395 YNTMINIYGKSLEHEKATNLIQ 416
++ S E K +Q
Sbjct: 725 MEILMERLSGSDELVKLRKFMQ 746
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+S + AYN+++ + + +M + G PD TY+TLI+ FGKH +S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA-SSIAPDLIAYNSMINV 261
++QM +D + + Y +I+ +G+ +A+ +F + S + P+ + YN +IN
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
F K F +A L +EM+ V P+ +Y+ L + + L + EM + C +
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 322 LTTCNIMID 330
T I+++
Sbjct: 722 QITMEILME 730
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/447 (18%), Positives = 180/447 (40%), Gaps = 60/447 (13%)
Query: 225 ELSRKLGDYSKAISIFARLKASSIA----------------------PD----------- 251
+++R+LG YS AIS F L A S + PD
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 252 ---------LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
++A +I FG+ + ++ L+ + + N ++ + ++ + + N
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGL 200
Query: 303 FVEALSVFSEM--NDAKCPLDLTTCNIMI-DVYGQLHMVEEG-DRLFWSMRKMGIEPNVV 358
+A V EM ++ P + T +I++ +V+ + + EE L G+ PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
+ ++ A + + K +N +++ G++++ + +L+ +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG------VQIDQVLYQTMIVAY 472
I+P+ +T +I+ K+ ++D A +F+++R ++ D + + T+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 473 ERAGLVAHAKRLLHELKR-----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
+ G + A+ LL +K P+ + I RA ++E A V + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
+ ++ R+ V F M + G + +++A + EKA Y
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 588 QIHDEGCVFPDEVHFQMLS-LYGARKD 613
++ + GC ++++ ++S L R+D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRD 527
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
+M + G+ PD T S+L+ F + +++ QME+ + D+V+ + LI+ K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
A+ + R+K I+P+++ Y+S+I K+ +A L EM + P+ +++S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
L+ Y + + SV+ M ++ T + +I + V+E ++ M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
G PNVV+Y+TL + +S + I L M ++GV N V+ NT+I Y ++ + + A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
+ M +NG+ PN +Y+ +++ G++++A F+ ++ + +D + Y MI
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 472 YERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFR 517
+A +V A L ++LK PD I L RA EA + R
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 42/315 (13%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL +L + ++ + SP+V Y+ ++ + ++ + A EM + + P+ T+S LI
Sbjct: 67 ALEVLKRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ K G L SK S++ + SI
Sbjct: 126 DAYAKRGKL-----------------------------------SKVDSVYKMMIQMSID 150
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
P++ Y+S+I EA +L M G P+ V+YSTL + + R + + +
Sbjct: 151 PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKL 210
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR---V 366
+M + +CN +I Y Q ++ +F M G+ PN+ SYN +L
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
GE E +A+ F MQK +++TY MI+ K+ ++A +L +++ ++P+
Sbjct: 271 NGEVE---KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Query: 427 AITYSTIISIWEKAG 441
Y+ +I+ +AG
Sbjct: 328 FKAYTIMIAELNRAG 342
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 122 SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPD 181
R D +R L +D K + +P+V ++ ++ + + ++ M Q + P+
Sbjct: 97 GRLADAERRLHEMD---SKKI-NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 152
Query: 182 RYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
+TYS+LI H +D ++ L M + ++V YS L K I +
Sbjct: 153 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 212
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNE 301
+ +A + ++ N++I + +A A + M NG+ P+ SY+ +LA N
Sbjct: 213 DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG 272
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
+ALS F M + LD+ T IMI + MV+E LF+ ++ +EP+ +Y
Sbjct: 273 EVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYT 332
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
++ + + EA L R QK V+QN
Sbjct: 333 IMIAELNRAGMRTEADALNRFYQKH-VRQN 361
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 183/395 (46%), Gaps = 12/395 (3%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS--GDLVLYSNLIEL 226
L D +R G P T+ +LI F + G +D+++ L+ M NV+ D + S +I
Sbjct: 121 LRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 227 SRKLGDYSKAISIF-ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
K+G A+ F + + + + P+L+ Y ++++ + E R L++ + D G
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D V YS + Y V+AL EM + D+ + +I+ID + VEE L
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
M K G+EPN+++Y ++R + EA LF + G++ + Y T+I+ +
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
+A +++ +M+ GIQP+ +TY+T+I+ AG++ A + S GV D + Y
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITY 415
Query: 466 QTMIVAY---ERAGLVAHAKRLLHELKRP-DNIPRETAIMVLARARRVEEATWVFRQAFA 521
T++ +Y + V +R E K P D + + EA ++R
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
D + + MI Y + + +E+F ++R+
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 144/296 (48%), Gaps = 7/296 (2%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
V +Y++++ + + A GL +M + G+ P+ TY+ +I K G L+ +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
++ + D LY LI+ + G+ ++A S+ ++ I P ++ YN++IN A
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
EA + GV D ++YSTLL Y+ + L + +AK P+DL CN
Sbjct: 397 RVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
I++ + + E D L+ +M +M + P+ +Y T+++ Y ++ EA+ +F ++K
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII-SIWEKAG 441
V V YN +I+ K + AT ++ E+ G+ + T T++ SI G
Sbjct: 512 SVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 157/361 (43%), Gaps = 6/361 (1%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+ AL + + + P++ Y ++ + + + L + G D YS
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
I + K G L +L ++M + ++ D+V YS LI+ K G+ +A+ + ++
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
+ P+LI Y ++I K EA +L + G+ D Y TL+ A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
S+ +M + T N +I+ V E D + G+ +V++Y+TLL Y
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY 422
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
+ + + + R + + ++V N ++ + + +A L + M + P+
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
TY+T+I + K G+++ A +F +LR S V V Y +I A + G++ A +L E
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIE 541
Query: 488 L 488
L
Sbjct: 542 L 542
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 170/410 (41%), Gaps = 76/410 (18%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
N++L+ L + A L+ M + L PD TY+T+I + K G ++ +L ++ +
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN---------- 260
+VS V Y+ +I+ K G A + L + D+ ++++
Sbjct: 511 SSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 261 ----VFGKAKL--------FREARLLLQE-------------MRDNGVCPDTVSY-STLL 294
V+G +L +A LLL + MR G+ TV++ ST+L
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTIL 626
Query: 295 AIYVDNER------------------------------------FVEALSVFSEMNDAKC 318
VDN R V+AL++ S
Sbjct: 627 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
L+ T N +I+ Q + E RLF S+ +G+ P+ V+Y L+ + LF +A
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L M KG+ N++ YN++++ Y K + E A ++ + P+A T S++I +
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
K G ++ A +F + + + D + +I + G + A+ LL E+
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 161/364 (44%), Gaps = 8/364 (2%)
Query: 202 LFW--LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
L+W L++++ VS D + LI K+G KA+ F R+K PD+ YN ++
Sbjct: 110 LYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL 169
Query: 260 NVFGKAKLF-REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
V + ++F A + EM P+ ++ L+ R +A +F +M
Sbjct: 170 RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGI 229
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
+ T I+I Q ++ +LF+ M+ G P+ V++N LL + + EA
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFE 289
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L RL +K G + Y+++I+ ++ + +A L M I+P+ I Y+ +I
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNI 494
KAGK++ A L + S G+ D Y +I A GL+ + L E+ PD
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
I + R V EA +F + +G ++ F +I+ ++ + + KM
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 555 REVG 558
EVG
Sbjct: 470 -EVG 472
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 49/387 (12%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS-- 201
SP+++ + +++ + + + A +FD+M RG++P+R TY+ LI+ + G D +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 202 LFW---------------------------------LQQMEQDNVSGDLVLYSNLIELSR 228
LF+ L+ E+D L YS+LI+
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
+ Y++A ++A + +I PD+I Y +I KA +A LL M G+ PDT
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
Y+ ++ E S+ EM++ + D T I+I + +V E + +F +
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEI 434
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV---------TYNTMI 399
K G P+V ++N L+ +S EA L M+ G ++ +++TM+
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV-GRPASLFLRLSHSGNRSFDTMV 493
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+S KA + + G P+ ++Y+ +I+ + +AG +D A L L+ G+
Sbjct: 494 ----ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLH 486
D V Y T+I R G A +L +
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLFY 576
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 44/416 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWH-LAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
P VF YNV+LR ++R + + LA +++EM + +P+ YT+ L+ K G +
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
M +S + V Y+ LI + G A +F ++ S PD +A+N++++ F
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K EA LL+ +G YS+L+ R+ +A +++ M D+
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
I+I + +E+ +L SM GI P+ YN +++ L E L M
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ + T+ +I ++ +A + E++ +G P+ T++ +I K+G+L
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 444 DRAAMLFQKLR---------------------------------------SSGVQIDQVL 464
A +L K+ +G D V
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVF 516
Y +I + RAG + A +LL+ L+ PD++ T I L R R EEA +F
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 33/288 (11%)
Query: 312 EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
E+ +D ++I Y ++ M E+ F M++ P+V +YN +LRV E
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 372 LFGE-AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
+F A ++ M K N+ T+ +++ K A + +M GI PN +TY
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+ +IS + G D A LF ++++SG D V + ++ + + G + A LL ++
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
G V + + +I+ R ++YT E+
Sbjct: 297 D-------------------------------GFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
+ M + PD + +++ K + E A L S + +G + PD
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG-ISPD 372
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 140/329 (42%), Gaps = 13/329 (3%)
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
L+E++ GV D+ + L++ Y +A+ F M + C D+ T N+++ V
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV--- 171
Query: 335 LHMVEE-----GDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
M EE ++ M K PN+ ++ L+ + +A +F M +G+
Sbjct: 172 -MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
N VTY +I+ + + A L EMQ +G P+++ ++ ++ + K G++ A L
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL----LHELKRPDNIPRETAIMVLAR 505
+ G + Y ++I RA A L L + +PD I I L++
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
A ++E+A + + G D + +I + +M E FPD+
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 566 IALVLNAFGKLREFEKADALYSQIHDEGC 594
+++ + + +A+ ++++I GC
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGC 439
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 10/321 (3%)
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
+ EK P++ A+N +L + ++K A +F+ MR R PD TYS L+ +GK
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYN 256
L + ++M D+V YS ++++ K G +A+ I + S P Y+
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 257 SMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
+++ +G EA EM +G+ D +++L+ + R V EM
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEG--DRLFWSMRKM--GIEPNVVSYNTLLRVYGESEL 372
+ +CNI++ H++E G D F RKM EP+ +Y +++++ E +
Sbjct: 372 GVTPNSKSCNIILR-----HLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKE 426
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
A +++ M+KKGV ++ T++ +IN + +KA L++EM GI+P+ +T+
Sbjct: 427 METADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGR 486
Query: 433 IISIWEKAGKLDRAAMLFQKL 453
+ + K + D L +K+
Sbjct: 487 LRQLLIKEEREDVLKFLNEKM 507
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 164/326 (50%), Gaps = 3/326 (0%)
Query: 133 LLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF 192
W ++ Y SV AY++++ + + +Q+ L L + MR++ + + T+ ++ +
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKY 178
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
+ +D +++ ME+ ++ +LV ++ L+ K + KA +F ++ PD
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDS 237
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
Y+ ++ +GK +AR + +EM D G PD V+YS ++ I R EAL +
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 297
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
M+ + C ++++ YG + +EE F M + G++ +V +N+L+ + ++
Sbjct: 298 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
+ + M+ KGV N + N ++ + E ++A ++ ++M +P+A TY+
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTM 416
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGV 458
+I ++ + +++ A +++ +R GV
Sbjct: 417 VIKMFCEKKEMETADKVWKYMRKKGV 442
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 168/356 (47%), Gaps = 8/356 (2%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
AY+ MI K + ++ L+ MR + + ++ ++ Y ++ EA+ F+ M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
P +L N ++ + V + +F +MR P+ +Y+ LL +G+
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNL 253
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
+A +FR M G ++VTY+ M++I K+ ++A +++ M + +P YS +
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
+ + +L+ A F ++ SG++ D ++ ++I A+ +A + + R+L E+K
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 494 IPRETAIMVLAR--ARRVE--EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
P + ++ R R E EA VFR+ E D + +I ++ K+ +
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADTYTMVIKMFCEKKEMETADK 432
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
V++ MR+ G FP + ++++N + R +KA L ++ + G + P V F L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG-IRPSGVTFGRL 487
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 141/304 (46%), Gaps = 4/304 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L + + ++A + + N + ++P Y+++L + A +F EM
Sbjct: 209 LLSALCKSKNVRKAQEVFE--NMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G PD TYS ++ K G +D +L ++ M+ +YS L+ +A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ F ++ S + D+ +NS+I F KA + +L+EM+ GV P++ S + +L
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
++ EA VF +M C D T ++I ++ + +E D+++ MRK G+ P+
Sbjct: 387 LIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+ +++ L+ E +A L M + G++ + VT+ + + K E E +
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE-EREDVLKFLN 504
Query: 417 EMQN 420
E N
Sbjct: 505 EKMN 508
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 173/383 (45%), Gaps = 7/383 (1%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP--DRYT 184
W +A W N + Y S YN ++ + + + + L L +EM + + T
Sbjct: 146 WNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT 205
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
S ++ K G + ++ +ME+ V D + ++L++ K A +F +L
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL 265
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
+I PD +N +I+ F KA+ F +AR ++ M+ PD V+Y++ + Y F
Sbjct: 266 -FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 304 VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
+ EM + C ++ T I++ G+ V E ++ M++ G P+ Y++L
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN--- 420
+ + ++ F +A +F M +GV+++V+ YNTMI+ E A L++ M++
Sbjct: 385 IHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEG 444
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAH 480
PN TY+ ++ + K+ +L + + V ID Y +I +G V
Sbjct: 445 ESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEE 504
Query: 481 AKRLLHELKRPDNIPRETAIMVL 503
A E R +PR++ +L
Sbjct: 505 ACLFFEEAVRKGMVPRDSTCKML 527
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE---KAGKLDRAAMLF 450
TYN M+++ GK + L+ EM N + +T T+ + K+GK ++A F
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNE-ESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 451 QKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRL---LHELKRPDNIPRETAIMVLARA 506
++ +S GV+ D + +++ A + + HA + L + +PD I +A
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKA 286
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
R+ ++A + D+ + + Y + + V E+ E+MRE G P+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 567 ALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDS 626
+V+++ GK ++ +A +Y ++ ++GCV + + ++ + F +FE + +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM-T 405
Query: 627 NPNINKKEL---HLVVSGIYERADRLNDASRIMNRM 659
N + + L ++ + ++ D + A R++ RM
Sbjct: 406 NQGVRRDVLVYNTMISAALHHSRDEM--ALRLLKRM 439
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 211/454 (46%), Gaps = 26/454 (5%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRG 177
VSL+ RE D Q L + + +++ ++ + Y+V+L N++R K++ + +M+
Sbjct: 60 VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119
Query: 178 LAPDRYTYSTLITHFGKHGLLDS--SLFWLQQ--------MEQDNVSGDLVLYSNLIELS 227
+ L+ HF + L D +F L Q + + +L++ S + LS
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PD 286
RKL Y+K + P+ +N ++ K A L+++EM+ +G+ P+
Sbjct: 180 RKLLLYAK--------HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN 231
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEM--NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
+++YSTL+ + R EA+ +F +M + P D T N+MI+ + + VE ++
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP-DPVTFNVMINGFCRAGEVERAKKI 290
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
M+K G PNV +Y+ L+ + + EA F ++K G++ + V Y T++N + +
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
+ E ++A L+ EM+ + + + +TY+ I+ G+ + A + + S GV +++
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 465 YQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAF 520
Y+ ++ A G + A + L + P + ++ L + E V
Sbjct: 411 YRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFL 470
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
G + +G ++ + +K +V E+ + +
Sbjct: 471 RIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 152/339 (44%), Gaps = 10/339 (2%)
Query: 106 LYNQRQLSIRFMVSLL-------SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVL 158
L+ + + RF SL SR + + + + I A PS+ A + L ++
Sbjct: 112 LHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 159 RAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVS-GD 216
+ + +L+ L + GL P+ ++ L+ H K+G ++ + +++M++ +S +
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN 231
Query: 217 LVLYSNLIELSRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
+ YS L++ +A+ +F + I+PD + +N MIN F +A A+ +L
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
M+ NG P+ +YS L+ + + EA F E+ LD +++ + +
Sbjct: 292 DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
+E +L M+ + ++YN +LR EA+ + +GV N +Y
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
++N + E EKA + M GI P+ T++ ++
Sbjct: 412 RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/535 (20%), Positives = 238/535 (44%), Gaps = 56/535 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+ SRE W+ L + + + P F + +L+ + + +
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIKL 210
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G++ ++++ + K G LD + + ++M + D++ +++++ + G + +A
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEA 266
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + ++ I+P L+ +N +I + + A L+Q+M G+ D +++ +++
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Query: 297 YVDNERFVEALSVFSEMNDA--------------KCPL---------------------D 321
+ N +AL +F +M A C D
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ N ++D+Y + +E+ ++F S++ +V ++N+++ Y ++ G+A LF
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG-IQPNAITYSTIISIWEKA 440
MQ ++ N++T+NTMI+ Y K+ + +A +L Q M+ +G +Q N T++ II+ + +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
GK D A LF+K++ S + V +++ A L A R +H N+ A+
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANL-LGAKMVREIHGCVLRRNLDAIHAV 561
Query: 501 M-----VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
A++ +E + R F E DI + +I Y + Y + +F +M+
Sbjct: 562 KNALTDTYAKSGDIEYS----RTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYG 609
G P+ ++ ++ A G + ++ ++ I ++ + P H M+ LYG
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 193/418 (46%), Gaps = 23/418 (5%)
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+ +++++ K +AR + MR+ + ++S ++ Y R+ E +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKL 168
Query: 310 FS-EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
F M D P D I+ VE G + + K+G+ + N++L VY
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGC-ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ A FR M+ +++V+ +N+++ Y ++ +HE+A L++EM+ GI P +
Sbjct: 228 KCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
T++ +I + + GK D A L QK+ + G+ D + MI G+ A + ++
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 489 KRPDNIPRETAIMVLARA----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
+P IM A + + + + V A G ++D+ V ++++YS+ K
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ- 603
+ +VF+ ++ + +++I + + KA L++++ D + P+ + +
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMIT----GYCQAGYCGKAYELFTRMQDAN-LRPNIITWNT 458
Query: 604 MLSLYGARKDFTMVESLFEKLDSNPNI--NKKELHLVVSGIYERADRLNDASRIMNRM 659
M+S Y D LF++++ + + N +L+++G Y + + ++A + +M
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG-YIQNGKKDEALELFRKM 515
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P VF +L + A +FD MR+R L +T+S +I + +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKL 168
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ M +D V D L+ +++ GD I + + ++ L NS++ V+ K
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A + MR+ D ++++++L Y N + EA+ + EM L T
Sbjct: 229 CGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
NI+I Y QL + L M GI +V ++ ++ + + +A+ +FR M
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN----NGIQPNAITYSTIISIWEKA 440
GV N VT + ++ + K N E+ + G + + ++++ ++ K
Sbjct: 345 LAGVVPNAVTIMSAVS----ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
GKL+ A +F +++ D + +MI Y +AG A L ++ RP+ I
Sbjct: 401 GKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVN-DISVFGCMINLYSRNKKYTNVVEVFEKMR 555
T I + EA +F++ G+V + + + +I Y +N K +E+F KM+
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP---DEVH 601
+ P+S I +L A L + +IH GCV D +H
Sbjct: 517 FSRFMPNSVTILSLLPACANLL----GAKMVREIH--GCVLRRNLDAIH 559
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 177/434 (40%), Gaps = 84/434 (19%)
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
EK SP + +N+++ + + A L +M G+ D +T++ +I+ +G+
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 199 DSSLFWLQQM-----------------------------EQDNVS------GDLVLYSNL 223
+L ++M E +++ D+++ ++L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 224 IELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV 283
+++ K G A +F +K D+ +NSMI + +A +A L M+D +
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 284 CPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
P+ ++++T+++ Y+ N EA+ +F M D K + T N++I Y Q +E
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGE-------SELFG-------EAIH---------- 378
LF M+ PN V+ +LL E+ G +AIH
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 379 -----------LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
+F M+ K +++T+N++I Y + A L +M+ GI PN
Sbjct: 570 AKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 428 ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY-QTMIVAYERAGLVAHAKRLLH 486
T S+II G +D +F + + I + + M+ Y RA + A + +
Sbjct: 626 GTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Query: 487 ELKRPDNIPRETAI 500
E+ NI ET I
Sbjct: 686 EM----NIQSETPI 695
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 233/516 (45%), Gaps = 40/516 (7%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
NV+LR+ + +W LF+ M+Q G TYS+ I G + +L Q +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKN-VSKALEIYQSIPD 159
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK-LFR 269
++ ++ + ++++ K G I +F ++K + PD++ YN+++ K K +
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP 219
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
+A L+ E+ NG+ D+V Y T+LAI N R EA + +M ++ + ++
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ Y ++ D L M+ +G+ PN V TLL+VY + LF + L ++ G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
+N + Y +++ K+ + E+A ++ +M+ G++ + S +IS ++ + A L
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRV 509
+ ++ + D V+ TM+ AY RAG + R++ +++
Sbjct: 400 SRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM---------------------KKM 438
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
+E QA + D + F +I + + K + + M G+ + + + +
Sbjct: 439 DE------QAVSP----DYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSL 488
Query: 570 LNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLY---GARKDFTMVESLFEKLDS 626
+ GK+R +A ++Y+ + E+H ++L + KD +V K+ S
Sbjct: 489 IYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAKMIS 548
Query: 627 NPNINKKELHLVVSGIYERADRLNDASRIMNRMNHK 662
P + K ++SG + +ND ++++ HK
Sbjct: 549 QPTLKKFGRAFMISG---NINLVNDVLKVLHGSGHK 581
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 188/403 (46%), Gaps = 23/403 (5%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK-HGLLDSSLFW 204
+V+ N +L +++ + LFD+M++ GL PD TY+TL+ K ++
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIEL 224
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ ++ + + D V+Y ++ + G +A + ++K +P++ Y+S++N +
Sbjct: 225 IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSW 284
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+++A L+ EM+ G+ P+ V +TLL +Y+ F + + SE+ A +
Sbjct: 285 KGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+++D + +EE +F M+ G+ + + + ++ S+ F EA L R +
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+ ++V NTM+ Y ++ E E ++++M + P+ T+ +I + K
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHL 464
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIV----------AYERAGLVAHAKR---------LL 485
A + S G ++++ L ++I A+ ++ ++KR +L
Sbjct: 465 LAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKIL 524
Query: 486 HELKRPDNIPRETAIMVLARARRVEEATW-VFRQAFA-AGEVN 526
H L + N+ ++ I+V A+ + + T F +AF +G +N
Sbjct: 525 HILIQ-GNLLKDAYIVVKDNAKMISQPTLKKFGRAFMISGNIN 566
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
V+ S++++ V N +LR +G S + + I LF MQ+ G + +V TY++
Sbjct: 79 VQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSS 137
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
I G KA + Q + + + N ++I+S K GKLD LF +++ G
Sbjct: 138 CIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDG 196
Query: 458 VQIDQVLYQTMIV-------AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVE 510
++ D V Y T++ Y +A + L H + D++ T + + A R E
Sbjct: 197 LKPDVVTYNTLLAGCIKVKNGYPKA--IELIGELPHNGIQMDSVMYGTVLAICASNGRSE 254
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
EA +Q G +I + ++N YS Y E+ +M+ +G P+ ++ +L
Sbjct: 255 EAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
Query: 571 NAFGKLREFEKADALYSQIHDEG 593
+ K F+++ L S++ G
Sbjct: 315 KVYIKGGLFDRSRELLSELESAG 337
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 11/334 (3%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+SP+++ Y+ +L + + A L EM+ GL P++ +TL+ + K GL D S
Sbjct: 268 HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L ++E + + + Y L++ K G +A SIF +K + D A + MI+
Sbjct: 328 ELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISAL 387
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
++K F+EA+ L ++ D V +T+L Y + + +M++ D
Sbjct: 388 CRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447
Query: 323 TTCNIMIDVY--GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
T +I+I + +LH++ L + +E + S +L+ G+ EA ++
Sbjct: 448 NTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCS--SLIYHLGKIRAQAEAFSVY 505
Query: 381 RLMQ--KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+++ K+ + + + I I G L + A ++++ QP + I
Sbjct: 506 NMLRYSKRTICKELHEKILHILIQGNLL--KDAYIVVKDNAKMISQPTLKKFGRAFMI-- 561
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+G ++ + + L SG +IDQV ++ I Y
Sbjct: 562 -SGNINLVNDVLKVLHGSGHKIDQVQFEIAISRY 594
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 174/396 (43%), Gaps = 56/396 (14%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
Q A L + + + P+ +N+V+ ++ A + A ++ + + D ++
Sbjct: 483 QEAFETLKMMENRGV-KPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----AS 537
Query: 188 LITHFGKHGLLDS------------------SLFWLQQMEQDNVSG--DLV--------- 218
++ F G LD +LF E+D +S DL+
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 219 ----LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
+Y LI ++ + KA F L I PDL Y MIN + + ++A L
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYAL 657
Query: 275 LQEMRDNGVCPDTVSYSTLL--AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVY 332
++M+ V PD V+YS LL +D +R +EA V D+ IMI+ Y
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIP---------DVVYYTIMINRY 708
Query: 333 GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNV 392
L+ +++ LF M++ I P+VV+Y LL+ E +L R M+ V+ +V
Sbjct: 709 CHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER-------NLSREMKAFDVKPDV 761
Query: 393 VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
Y +I+ K + +A + +M +G+ P+A Y+ +I+ K G L A M+F +
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+ SGV+ D V Y +I R G V A +L+ E+
Sbjct: 822 MIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 211/505 (41%), Gaps = 45/505 (8%)
Query: 153 VLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDN 212
+L+ + + A+ LF E R+ ++ DR Y+ GK G ++ ++ ++M
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 213 VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREAR 272
++ D++ Y+ LI G S A + + + PD++ YN + L +EA
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 273 LLLQEMRDNGVCPDTVSYSTLLAIYVDN------ERFVEALSVFSEMNDAK--------- 317
L+ M + GV P V+++ ++ +D E F E+L S NDA
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAG 546
Query: 318 C-------------PLDLTT-CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL 363
C PL + + + + + + L M K+G+EP Y L
Sbjct: 547 CLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGI 423
+ + +A F ++ K + ++ TY MIN Y + E ++A L ++M+ +
Sbjct: 607 IGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV 666
Query: 424 QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKR 483
+P+ +TYS +++ +LD + +++ + V D V Y MI Y +
Sbjct: 667 KPDVVTYSVLLN---SDPELD----MKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 484 LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
L ++KR + +P VL + + + R+ A D+ + +I+ +
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLS---REMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ 603
+F++M E G PD+ ++ K+ ++A ++ ++ + G V PD V +
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG-VKPDVVPYT 835
Query: 604 MLSLYGARKDFT-----MVESLFEK 623
L R F +V+ + EK
Sbjct: 836 ALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 131/575 (22%), Positives = 238/575 (41%), Gaps = 60/575 (10%)
Query: 84 MDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINE---- 139
+D L + +E +VM L + +V L+ T +A A LD +E
Sbjct: 109 LDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDI 168
Query: 140 --KALYS----PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFG 193
+A YS P + A N ++ ++ + + + G F E+ + GL D +TY ++
Sbjct: 169 FFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALW 228
Query: 194 KHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE--LSRKLGDYSKAISIFARLKASSIAPD 251
++ + L ++ V Y N IE ++ D A + L+ ++I D
Sbjct: 229 RNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI--AYFLLQPLRDANILVD 286
Query: 252 L----IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
IAY ++ +A ++ +M +G+ PD YS ++ + N +A+
Sbjct: 287 KSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAV 346
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
VF++M + ++ + ++ Y Q+ E LF R+ I + V YN
Sbjct: 347 DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 368 GESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN---IYGKS------------------- 405
G+ EAI LFR M KG+ +V+ Y T+I + GK
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 406 -----LEHEKATN-LIQE-------MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
L ATN L QE M+N G++P +T++ +I AG+LD+A ++
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHA-KRLLH-ELKRPDNIPRETAIMVLARARRVE 510
L + D +M+ + AG + HA +R + E P ++ + A +
Sbjct: 527 LEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
+A + + + G + S++G +I + R E FE + PD +++
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 571 NAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
N + +L E ++A AL+ + V PD V + +L
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRD-VKPDVVTYSVL 676
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 182/443 (41%), Gaps = 32/443 (7%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
AY V+R + + A + +M + G+ PD Y YS +I K+ + ++ +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ + V+ S++++ ++G++S+A +F + ++I+ D + YN + GK
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
EA L +EM G+ PD ++Y+TL+ + +A + EM+ D+ N++
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY---GE---SELFGEAI----- 377
+ +E M G++P V++N ++ GE +E F E++
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 378 -----------------HLF-RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
H F R ++ + V + ++ + KA +L+ M
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVA 479
G++P Y +I W + + +A F+ L + + D Y MI Y R
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 480 HAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYS 539
A L ++KR D P VL + + + R+ A + D+ + MIN Y
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNS---DPELDMKREMEAFDVIPDVVYYTIMINRYC 709
Query: 540 RNKKYTNVVEVFEKMREVGYFPD 562
V +F+ M+ PD
Sbjct: 710 HLNDLKKVYALFKDMKRREIVPD 732
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 49/289 (16%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P +F Y +++ R + A+ LF++M++R + PD TYS L+ D L
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDM 685
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
++ME +V D+V Y+ +I L D K ++F +K I PD++ Y ++
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--- 742
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ R L +EM+ V PD Y+ L+ D +C +
Sbjct: 743 ----KPERNLSREMKAFDVKPDVFYYTVLI--------------------DWQCKI---- 774
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
G L E R+F M + G++P+ Y L+ + EA +F M
Sbjct: 775 --------GDLG---EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
+ GV+ +VV Y +I ++ KA L++EM GI+P + S +
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 14/190 (7%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRY 183
E D +R + D I P V Y +++ + LF +M++R + PD
Sbjct: 682 ELDMKREMEAFDVI-------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVV 734
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY+ L+ + + L ++M+ +V D+ Y+ LI+ K+GD +A IF ++
Sbjct: 735 TYTVLLKNKPERNLS-------REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM 787
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF 303
S + PD Y ++I K +EA+++ M ++GV PD V Y+ L+A N
Sbjct: 788 IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFV 847
Query: 304 VEALSVFSEM 313
++A+ + EM
Sbjct: 848 LKAVKLVKEM 857
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M++ D ++ AL + + + P V Y V+L+N L EM+
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIV-PDVVTYTVLLKN-------KPERNLSREMKAF 755
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD + Y+ LI K G L + QM + V D Y+ LI K+G +A
Sbjct: 756 DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
IF R+ S + PD++ Y ++I + +A L++EM + G+ P S S +
Sbjct: 816 KMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 119 SLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLR--------------NVLRAKQWH 164
SL S D Q AL+ DWI+ + +V +Y ++ +L K +
Sbjct: 32 SLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCN 91
Query: 165 -LAHGLF-----DEMRQRGLAPDRY-----TYSTLITHFGKHGLLDSSLFWLQQMEQDNV 213
+ LF MR+ +Y Y+ L++ + GL++ +M +D V
Sbjct: 92 SVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLV 151
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
S D+ ++ L+ KLG +A L + PD Y S I + K A
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+ +EM NG + VSY+ L+ + ++ EALS+ +M D C ++ T ++ID
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
E LF M + GI+P+ Y L++ + + EA L M + G+ NV+
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
TYN +I + K H KA L+ +M + P+ ITY+T+I+ +G LD A L +
Sbjct: 332 TYNALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Query: 454 RSSGVQIDQ 462
SG+ +Q
Sbjct: 391 EESGLVPNQ 399
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 147/304 (48%), Gaps = 3/304 (0%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
D+ R + D K +P YN +L ++ R L+ EM + ++PD YT+
Sbjct: 101 DFCRTMRKGDSFEIKYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTF 158
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+TL+ + K G + + ++ + Q D Y++ I + + A +F +
Sbjct: 159 NTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ 218
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
+ + ++Y +I +AK EA LL +M+D+ CP+ +Y+ L+ + + E
Sbjct: 219 NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
A+++F +M+++ D ++I + ++E L M + G+ PNV++YN L++
Sbjct: 279 AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 366 VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
+ + + +A+ L M ++ + +++TYNT+I S + A L+ M+ +G+ P
Sbjct: 339 GFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Query: 426 NAIT 429
N T
Sbjct: 398 NQRT 401
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
YN++++ + L E + L EM ++ V PD +++TL+ Y VEA + +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
A C D T I + + V+ ++F M + G N VSY L+ E++
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA+ L M+ NV TY +I+ S + +A NL ++M +GI+P+ Y+ +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
I + LD A+ L + + +G+ + + Y +I + + V A LL ++ +
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNL 360
Query: 494 IP 495
+P
Sbjct: 361 VP 362
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 5/241 (2%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N ++ + +VEE RL+ M + + P++ ++NTL+ Y + EA + +
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G + TY + I + + E + A + +EM NG N ++Y+ +I +A K+D
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIM 501
A L K++ + Y +I A +G + A L ++ +PD+ I
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
++EA+ + G + ++ + +I + + K + + KM E P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVP 362
Query: 562 D 562
D
Sbjct: 363 D 363
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
YN LL L E L+ M + V ++ T+NT++N Y K +A + +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
G P+ TY++ I+ + ++D A +F+++ +G ++V Y +I A +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 479 AHAKRLLHELKRPDNIP--RETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
A LL ++K + P R +++ L + + EA +F+Q +G D ++ +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGC 594
I + + E M E G P+ ++ F K + KA L S++ ++
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNL 360
Query: 595 VFPDEVHFQML 605
V PD + + L
Sbjct: 361 V-PDLITYNTL 370
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 209/463 (45%), Gaps = 13/463 (2%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSL 202
SP VF ++V+ R+ A E GL + TY++LI + G ++
Sbjct: 222 SPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 281
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L+ M + VS ++V Y++LI+ K G +A +F LK + D Y +++ +
Sbjct: 282 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ R+A + M + GV +T ++L+ Y + + VEA +FS MND D
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T N ++D Y + V+E +L M + + P V++YN LL+ Y F + + L+++
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M K+GV + ++ +T++ K + +A L + + G+ + IT + +IS K K
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ET 498
++ A + + + YQ + Y + G + A + ++R P T
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMI----NLYSRNKKYTNVVEVFEKM 554
I + R + + + + A G ++ +G +I N+ +K Y E+ EK
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK- 640
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
G + N+ + + N+ +L + ++A L +I D + P
Sbjct: 641 ---GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLP 680
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 155/329 (47%), Gaps = 1/329 (0%)
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQD-NVSGD 216
+R + +A ++D+M ++PD +T S ++ + + G +D ++ + ++ E + +
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 217 LVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ 276
+V Y++LI +GD + + ++ +++ Y S+I + K L EA + +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
+++ + D Y L+ Y + +A+ V M + + T CN +I+ Y +
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 337 MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYN 396
+ E +++F M ++P+ +YNTL+ Y + EA+ L M +K V V+TYN
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
++ Y + +L + M G+ + I+ ST++ K G + A L++ + +
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
G+ D + MI + V AK +L
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 205/472 (43%), Gaps = 27/472 (5%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
N ++ ++ Q A +F M L PD +TY+TL+ + + G +D +L QM Q
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
V ++ Y+ L++ ++G + +S++ + + D I+ ++++ K F E
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A L + + G+ DT++ + +++ E+ EA + +N +C + T +
Sbjct: 490 AMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSH 549
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
Y ++ ++E + M + GI P + YNTL+ + + L ++ +G+
Sbjct: 550 GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
V TY +I + +KA EM GI N S I + + K+D A +L
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 451 QKLRSSGVQIDQVL--YQTMIVAYERAGLVAHAKRLLHE---------LKRPDNIPRETA 499
QK+ V D +L YQ++ E + + + E L P+NI A
Sbjct: 670 QKI----VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVA 725
Query: 500 IMVLARARRVEEATWVFRQAFAAGE-VND-----ISVFGCMINLYSRNKKYTNVVEVFEK 553
I L +A ++E+A +F ++ + D I + GC I NK +T + ++
Sbjct: 726 IAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIA-GDINKAFT----LRDE 780
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
M G P+ ++ KL ++A L ++ +G + P+ + + L
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG-ITPNAITYNTL 831
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 182/456 (39%), Gaps = 86/456 (18%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL L D + +K + P+V YN++L+ R +H L+ M +RG+ D + STL+
Sbjct: 420 ALKLCDQMCQKEVV-PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 190 THFGKHGLLDSSL-FW---------------------LQQMEQDNVSGDLV--------- 218
K G + ++ W L +ME+ N + +++
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 219 ----LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLL 274
Y L K+G+ +A ++ ++ I P + YN++I+ K + + L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
+ E+R G+ P +Y L+ + + +A + EM + L++ C+ + + +
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 335 LHMVEEGDRLFW--------------------------------------SMRKMGIEPN 356
L ++E L S K + PN
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 357 VVSYNTLLRVYGESELFGEAIHLFR-LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ YN + ++ +A LF L+ + TY +I+ + + KA L
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
EM GI PN +TY+ +I K G +DRA L KL G+ + + Y T+I ++
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Query: 476 GLVAHAKRLLHEL----------KRPD-NIPRETAI 500
G VA A RL ++ K+ D +IP+E +
Sbjct: 839 GNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVL 874
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 172/409 (42%), Gaps = 62/409 (15%)
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM------------------RDNGVCP 285
K PD AY M+++ +A+ +++ + L E+ ++ P
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSP 155
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPL------------------------ 320
+ +L +Y + AL VF M N + P
Sbjct: 156 TV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 321 ----------DLTTCNIMIDVYGQLHMVEEGDRLFW--SMRKMGIEPNVVSYNTLLRVYG 368
D+ TC+I+++ Y + V++ +F + +G+E NVV+YN+L+ Y
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ RLM ++GV +NVVTY ++I Y K E+A ++ + ++ + +
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
Y ++ + + G++ A + + GV+ + + ++I Y ++G + A+++ +
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 489 K----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
+PD+ T + RA V+EA + Q V + + ++ YSR +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 545 TNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+V+ +++ M + G D + +L A KL +F +A L+ + G
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 25/312 (8%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
+ + A A+ +++ K ++ P++ YN ++ + + + L E+R RGL P TY
Sbjct: 556 NLKEAFAVKEYMERKGIF-PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
LIT + G++D + +M + ++ ++ + S + +L +A + ++
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI-- 672
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLL-------LQEMRDNG-----VCPDTVSYSTL 293
+ ++ ++ + K F EA + E +N + P+ + Y+
Sbjct: 673 -------VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVA 725
Query: 294 LAIYVDNERFVEALSVFSEM--NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
+A + +A +FS++ +D P D T I+I + + L M
Sbjct: 726 IAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
GI PN+V+YN L++ + A L + +KG+ N +TYNT+I+ KS +A
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Query: 412 TNLIQEMQNNGI 423
L ++M G+
Sbjct: 845 MRLKEKMIEKGL 856
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 207/494 (41%), Gaps = 46/494 (9%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
A N ++ + + + LF +++Q GL + YTY+ ++ + G L+ + L +
Sbjct: 183 ACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL--I 240
Query: 209 EQDNVSG----------------DLVLYSNLIELSRKLGDYSKAI--------------- 237
E ++V G + L LI+ GD +A+
Sbjct: 241 ENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 238 ---SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
S+ ++ D+ A ++I+ + K EA L +M G+ + V S +L
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
Y + +EAL F E D LD N+ D +L VEE L M+ GI
Sbjct: 361 QCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIV 420
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P+V++Y TL+ Y +A+ L M G+ +++TYN +++ ++ E+ +
Sbjct: 421 PDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEI 480
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ M+ G +PNA+T S II A K+ A F L + + + Y
Sbjct: 481 YERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK----ASFVKGYCE 536
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIMV---LARARRVEEATWVFRQAFAAGEVNDISVF 531
AGL A + L+ P + + I + L +E+A V ++ A S+
Sbjct: 537 AGLSKKAYKAFVRLEYP--LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMC 594
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
G MI + + +F+ M E G PD ++++ + +L E +KA++L+ +
Sbjct: 595 GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQ 654
Query: 592 EGCVFPDEVHFQML 605
G + PD V + +L
Sbjct: 655 RG-IKPDVVTYTVL 667
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 218/514 (42%), Gaps = 53/514 (10%)
Query: 99 ELHAVMSLYNQRQLSIRFMVSLLSRETDWQRALAL-LDWINEKALYSPSVFA-YNVVLRN 156
E A++ + N+ + ++ L + ++A+AL L+ I+ K L + A +V+R
Sbjct: 233 EEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRG 292
Query: 157 VLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGD 216
+ A + EM + G D Y +I + K+ L +L +L +M + +
Sbjct: 293 FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
Query: 217 LVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ 276
V+ S +++ K+ +A+ F + +I D + YN + K EA LLQ
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
EM+D G+ PD ++Y+TL+ Y + V+AL + EM DL T N+++ +
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 337 MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNV---- 392
EE ++ M+ G +PN V+ + ++ + EA F +++K +
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVK 532
Query: 393 -----------------VTYNTMINIYGK-----SLEH--EKATNLIQEMQNNGIQPNAI 428
+ Y ++Y K +E EKA +++++M ++P
Sbjct: 533 GYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+I + K + A +LF + G+ D Y MI Y R + A+ L ++
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 489 K----RPDNIPRETAIMVLARARRVE----------------EATWVFRQAFAAGEVNDI 528
K +PD + T ++L R +++ +A+ V R+ AAG D+
Sbjct: 653 KQRGIKPDVV---TYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDV 709
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
+ +I+ + E+F++M + G PD
Sbjct: 710 VCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 2/323 (0%)
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
W E+ + +V +Y+++++ ++ L DEM Q G T++ LI G+
Sbjct: 138 WSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEA 197
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
GL ++ + + N Y+ ++ + Y ++ ++ +PD++ Y
Sbjct: 198 GLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTY 257
Query: 256 NSMI-NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
N ++ + K+ R RL EM +G PD+ +Y+ LL I + + AL+ + M
Sbjct: 258 NILLWTNYRLGKMDRFDRLF-DEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMK 316
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+ + +ID + +E M K G P+VV Y ++ Y S
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+A +FR M KG NV TYN+MI + E +A L++EM++ G PN + YST++
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 435 SIWEKAGKLDRAAMLFQKLRSSG 457
S KAGKL A + +++ G
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 149/325 (45%), Gaps = 4/325 (1%)
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
F+L EQ+ + Y L+++ + G+Y + + +N +I
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
G+A L ++A + + + P SY+ +L + +++ V+ +M + D+
Sbjct: 195 GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T NI++ +L ++ DRLF M + G P+ +YN LL + G+ A+
Sbjct: 255 LTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH 314
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M++ G+ +V+ Y T+I+ ++ E + EM G +P+ + Y+ +I+ + +G+
Sbjct: 315 MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRET 498
LD+A +F+++ G + Y +MI AG A LL E++ P+ + T
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 499 AIMVLARARRVEEATWVFRQAFAAG 523
+ L +A ++ EA V R+ G
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKG 459
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 7/300 (2%)
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
SY L+ I+ + + + EM P T N++I G+ + ++ F
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
+ P SYN +L + + +++ M + G +V+TYN ++ + +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
++ L EM +G P++ TY+ ++ I K K A ++ G+ + Y T+
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 469 IVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
I RAG + K L E+ RPD + I + +++A +FR+ G+
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV---LNAFGKLREFEK 581
+ ++ + MI ++ + ++M G P+ V + + L GKL E K
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 190/433 (43%), Gaps = 54/433 (12%)
Query: 118 VSLLSRETDWQRALALL-DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
V+ L + + +RA LL D I L P V YN +++ R A+ + MR+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVL--PDVITYNTLIKGYTRFIGIDEAYAVTRRMREA 77
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK- 235
G+ PD TY++LI+ K+ +L+ L +M +S D+ Y+ L+ KLG + +
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 236 -----------------------------------AISIFARLKASSIAPDLIAYNSMIN 260
AI +F LK S + P+L+ YN +IN
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILIN 196
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
K++ +++E++ +G P+ V+Y+T+L +Y +R + L +F +M
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP-NVVSYNTLLRVYGESELFGEAIHL 379
D ++ + EE + + G ++VSYNTLL +Y + L
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 380 FRLMQKKGVQQNVVTY----NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
++ KG++ + T+ N ++NI G + EK I EM G+QP+ +T + +I
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNGLLNI-GNTGGAEKHLACIGEM---GMQPSVVTCNCLID 372
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG-LVAHAKRLLHELKRPDNI 494
KAG +DRA LF + D+ Y +++ + G LV +K LL + I
Sbjct: 373 GLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
Query: 495 PRETAIMVLARAR 507
P VL+ R
Sbjct: 429 PSSARRAVLSGIR 441
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 185/407 (45%), Gaps = 44/407 (10%)
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNV 213
RN+ RA+ L D +R G+ PD TY+TLI + + +D + ++M + +
Sbjct: 26 FRNLERAETL-----LIDGIRL-GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREA-R 272
D+ Y++LI + K ++ + +F + S ++PD+ +YN++++ + K EA +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 273 LLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVY 332
+L +++ G+ P +Y+ LL + A+ +F + P +L T NI+I+
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYNILINGL 198
Query: 333 GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV---- 388
+ V D + ++K G PN V+Y T+L++Y +++ + + LF M+K+G
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 389 --------------------------------QQNVVTYNTMINIYGKSLEHEKATNLIQ 416
Q++V+YNT++N+Y K + +L++
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
E++ G++P+ T++ I++ G A + G+Q V +I +AG
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 477 LVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
V A RL ++ D + + L + R+ A+ + + G
Sbjct: 379 HVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 152/305 (49%), Gaps = 5/305 (1%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
NI ++ + +E + L ++G+ P+V++YNTL++ Y EA + R M++
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G++ +V TYN++I+ K+L + L EM ++G+ P+ +Y+T++S + K G+
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 446 A-AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK---RPDNIPRETAIM 501
A +L + + +G+ Y ++ A ++G +A L LK +P+ + I
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILIN 196
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
L ++RRV W+ R+ +G + + M+ +Y + K+ +++F KM++ GY
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESL 620
D V++A K E+A ++ G D V + +L+LY + V+ L
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 621 FEKLD 625
E+++
Sbjct: 317 LEEIE 321
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 21/343 (6%)
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
+K I+ L+ N +N K + A LL + GV PD ++Y+TL+ Y R
Sbjct: 6 MKFPGISTKLL--NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT---R 60
Query: 303 FV---EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
F+ EA +V M +A D+TT N +I + M+ +LF M G+ P++ S
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWS 120
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQK----KGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
YNTL+ Y + GEA F+++ + G+ + TYN +++ KS + A L
Sbjct: 121 YNTLMSCYFKLGRHGEA---FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF 177
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
+ +++ ++P +TY+ +I+ K+ ++ + ++L+ SG + V Y TM+ Y +
Sbjct: 178 KHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKT 236
Query: 476 GLVAHAKRLLHELKRP----DNIPRETAIMVLARARRVEEATWVFRQAFAAG-EVNDISV 530
+ +L ++K+ D + L + R EEA + +G DI
Sbjct: 237 KRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVS 296
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
+ ++NLY ++ V ++ E++ G PD +++N
Sbjct: 297 YNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 164/347 (47%), Gaps = 4/347 (1%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+P++F N++++ + + A+ + DE+ GL P+ TY+T++ + G ++S+
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
L++M D Y+ L++ KLG +S+A ++ ++ + I P+ + Y MI
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K K EAR + EM + PD+ ++ ++ + EA ++ +M C D
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+ +I + V E +LF K I P++++YNTL+ E EA L+ M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
++ + N TYN +I K+ ++ +++EM G PN T+ + +K GK
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMI--VAYERAGLVAHAKRLLHEL 488
+ A + +G ++D+ ++ + A E V K LLHE+
Sbjct: 487 EDAMKIVSMAVMNG-KVDKESWELFLKKFAGELDKGVLPLKELLHEI 532
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 149/361 (41%), Gaps = 4/361 (1%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN-GVCPDTVS 289
G Y ++ IF R+ + + + N+++NV + + F + + +++ G+ P+ +
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
+ L+ A V E+ +L T ++ Y +E R+ M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
G P+ +Y L+ Y + F EA + M+K ++ N VTY MI K +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+A N+ EM P++ +I + K+D A L++K+ + D L T+I
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 470 VAYERAGLVAHAKRLLHELKR---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
+ G V A++L E ++ P + T I + + EA ++ +
Sbjct: 374 HWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+ + +I S+N V V E+M E+G FP+ ++ KL + E A +
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 587 S 587
S
Sbjct: 494 S 494
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 160/386 (41%), Gaps = 41/386 (10%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSLFW 204
SV + N +L +++ +++ L H +F ++ G+ P+ +T + L+ K ++S+
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L ++ + +LV Y+ ++ GD A + + PD Y +++ + K
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
F EA ++ +M N + P+ V+Y ++ ++ EA ++F EM + D +
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
C +ID + H V+E A L+R M
Sbjct: 334 CCKVIDALCEDHKVDE-----------------------------------ACGLWRKML 358
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
K + +T+I+ K +A L E + I P+ +TY+T+I+ + G+L
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELT 417
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV-- 502
A L+ + + + Y +I + G V R+L E+ P +T ++
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 503 --LARARRVEEATWVFRQAFAAGEVN 526
L + + E+A + A G+V+
Sbjct: 478 EGLQKLGKEEDAMKIVSMAVMNGKVD 503
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 183/417 (43%), Gaps = 13/417 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL-F 203
P +F N ++ ++ +F +M ++G+ + +TY +I + K G +D +L
Sbjct: 307 PCIF--NTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
++ +++S ++ Y+NLI K G KA+ + R+ + I PD I Y ++ +
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K + A ++LQ + DNG + L I V E + ++ + N A L +
Sbjct: 425 KCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR-KDANLAAVGLAVV 483
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T + Q + + R+ M +G P SYN++++ + + + L ++
Sbjct: 484 TTALC----SQRNYIAALSRI-EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNII 538
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
Q+ +V TY ++N K + + A +I M+ G++P YS+II K G++
Sbjct: 539 QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETA 499
A F K+ SG+Q D++ Y MI Y R G + A L+ E+ RP +
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVL 658
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
I + +E+ + G ++ ++ +I + + + +F M E
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 7/293 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P AY +++ R + A+ L +E+ + L P +TY+ LI+ F K G+++ +
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L +M +D +S ++VLY+ LI K GD+ + ++F + + I D IAY ++++ +
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE---ALSVFSEMNDAKCPLD 321
A ++ R ++ E + + L++I + A+ V ++ + P +
Sbjct: 735 AMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP-N 793
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
L N +I Y ++E SM+K GI PN+V+Y L++ + E+ AI LF
Sbjct: 794 LYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF- 852
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+ + + V Y+T++ A L+ EMQ +GI PN +Y ++
Sbjct: 853 --EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 173/403 (42%), Gaps = 21/403 (5%)
Query: 131 LALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLIT 190
LA L I ++ + P V Y +V+ + + A + D M + GL P YS++I
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 191 HFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAP 250
GK G + + +M + + D + Y +I + G +A + + + P
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVF 310
Y +I+ F K + + L +M ++G+ P+ V Y+ L+ ++ F + ++F
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF 710
Query: 311 SEMNDAKCPLD-LTTCNIMIDVYGQLH-------MVEEGDRLFWSMRKMGIEPNVVSYNT 362
M + D + ++ ++ + +VE G R + +P +VS +
Sbjct: 711 GLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ-RLIRTKP-LVSIPS 768
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
L YG E I KK + N+ +NT+I Y + ++A N ++ MQ G
Sbjct: 769 SLGNYGSKSFAMEVIGKV----KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
I PN +TY+ ++ +AG ++ A LF+ + + DQV+Y T++ A
Sbjct: 825 IVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDAL 881
Query: 483 RLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFA 521
L+ E+++ P+ E + L +R EA V + A
Sbjct: 882 ALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAA 924
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 179/457 (39%), Gaps = 62/457 (13%)
Query: 187 TLITHFGKHGLLDSSLFWLQQM-----------------EQDNVSGDLVLYSNLIELSRK 229
+LI G+ GLLDS+ ++++ + + D Y LI +
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTE 107
Query: 230 LGDYSKAISIF-ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
+G A + + R+ + I PD +SM+ K + F EAR L + +G P
Sbjct: 108 MGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRN 167
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN-IMIDVYGQLHMVEEGDRL--F 345
S S ++ + +RF+EA F ++ + L L C + + G H+ E L
Sbjct: 168 SSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTL 227
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
M +M + N+ Y +L + + EA LF M+ G + V Y ++ Y K
Sbjct: 228 CGMTRMPLPVNL--YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKD 285
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
A L M + + ++T+I + K G LD+ ++F ++ GVQ + Y
Sbjct: 286 NNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTY 345
Query: 466 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
MI +Y + G V +A RL ++I R
Sbjct: 346 HIMIGSYCKEGNVDYALRLFVNNTGSEDISR----------------------------- 376
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
++ + +I + + V++ +M + G PD ++L K E + A +
Sbjct: 377 -NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVI 435
Query: 586 YSQIHDEGC-----VFPD--EVHFQMLSLYG--ARKD 613
I D GC V D + ++ SL G ARKD
Sbjct: 436 LQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKD 472
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 193/500 (38%), Gaps = 41/500 (8%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A AL D + Y V Y +++ + +A L+ M +R D ++TLI
Sbjct: 256 AEALFDHMEVDGYYVDKVM-YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS-SI 248
F K G+LD QM + V ++ Y +I K G+ A+ +F S I
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDI 374
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
+ ++ Y ++I F K +A LL M DNG+ PD ++Y LL + A+
Sbjct: 375 SRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMV 434
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ + D C ++ +ID G + + E L + + V +
Sbjct: 435 ILQSILDNGCGINPP----VIDDLGNIEVKVES--LLGEIARKDANLAAVGLAVVTTALC 488
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ A+ M G +YN++I + E +L+ +Q P+
Sbjct: 489 SQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVD 548
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
TY +I + E K DR A +I A E GL
Sbjct: 549 TY--LIVVNELCKKNDRDAAF-----------------AIIDAMEELGL----------- 578
Query: 489 KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV 548
RP + I L + RV EA F + +G D + MIN Y+RN +
Sbjct: 579 -RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 549 EVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLY 608
E+ E++ + P S ++++ F K+ EK ++ ++G + P+ V + L +
Sbjct: 638 ELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG-LSPNVVLYTALIGH 696
Query: 609 GARK-DFTMVESLFEKLDSN 627
+K DF +LF + N
Sbjct: 697 FLKKGDFKFSFTLFGLMGEN 716
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 130/321 (40%), Gaps = 42/321 (13%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
K PS F Y V++ ++ D+M + GL+P+ Y+ LI HF K G
Sbjct: 645 KHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIE-----LSRK------------------------- 229
S M ++++ D + Y L+ ++RK
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Query: 230 -----LGDY---SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN 281
LG+Y S A+ + ++K SI P+L +N++I + A EA L+ M+
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKE 823
Query: 282 GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
G+ P+ V+Y+ L+ +++ A+ +F N C D + ++ +
Sbjct: 824 GIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
L M+K GI PN SY LL+ S L EA+ + + M + + + +I I
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYI 940
Query: 402 YGKSLEHEKATNLIQEMQNNG 422
+ + +A L M +G
Sbjct: 941 LCEEKKLREARALFAIMVQSG 961
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 35/286 (12%)
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
M Q ++ D+V+ + +++ K G++ A ++F + I P+++ YN MI+ F +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
+ +A LL+ M + + PD V++S L+ +V + EA ++ EM
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-------------- 106
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
L WS I P ++YN+++ + + + +A + M KG
Sbjct: 107 ----------------LRWS-----IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+VVT++T+IN Y K+ + + EM GI N +TY+T+I + + G LD A
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
L ++ S GV D + + M+ + A +L +L++ ++
Sbjct: 206 DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSED 251
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A LF EM ++G+ P+ TY+ +I F G + L+ M + ++ D+V +S LI
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
K S+A I+ + SI P I YNSMI+ F K +A+ +L M G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D V++STL+ Y +R + +F EM+ + T +I + Q+ ++ L
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
M G+ P+ ++++ +L + +A + +QK
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%)
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M Q + D + ++ K G ++ +M + + +++ Y+ +I+ G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+S A + + I PD++ ++++IN F K + EA + +EM + P T++Y++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
++ + +R +A + M C D+ T + +I+ Y + V+ G +F M + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I N V+Y TL+ + + A L M GV + +T++ M+ E KA
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 413 NLIQEMQNN 421
+++++Q +
Sbjct: 241 AILEDLQKS 249
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 6/247 (2%)
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M + ++ +VV +++ K H A NL EM GI PN +TY+ +I + +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRET 498
A L + + + D V + +I A+ + V+ A+ + E+ R P I +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I + RV++A + + G D+ F +IN Y + K+ N +E+F +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMV 617
++ +++ F ++ + + A L +++ G V PD + F ML+ ++K+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG-VAPDYITFHCMLAGLCSKKELRKA 239
Query: 618 ESLFEKL 624
++ E L
Sbjct: 240 FAILEDL 246
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
L+ M+ W A LL + EK + +P + ++ ++ ++ ++ A ++
Sbjct: 46 LTYNCMIDSFCHSGRWSDADQLLRHMIEKQI-NPDIVTFSALINAFVKERKVSEAEEIYK 104
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
EM + + P TY+++I F K +D + L M S D+V +S LI K
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+ IF + I + + Y ++I+ F + A+ LL EM GV PD +++
Sbjct: 165 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAK 317
+LA + +A ++ ++ ++
Sbjct: 225 CMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+V L ++ + A L ++EK ++ P+V YN ++ + + +W A L M ++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIF-PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
+ PD T+S LI F K + + ++M + ++ + Y+++I+ K A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + + +PD++ ++++IN + KAK + EM G+ +TV+Y+TL+
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
+ A + +EM D T + M+
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 250/541 (46%), Gaps = 60/541 (11%)
Query: 83 DMDELLASISSTQNEQELHAVMSLYNQ--RQLSIRF--MVSLLSRETDWQRALALLDWIN 138
D+ E +ISS + + ++ + R S+ + M+S R +++ A L D +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL 198
E+ L S +NV+++ +R + A LF+ M +R D +++T+++ + ++G +
Sbjct: 123 ERDLVS-----WNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCV 173
Query: 199 DSSLFWLQQM-EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
D + +M E+++VS + +L S ++ S+ +A +F + + L+++N
Sbjct: 174 DDARSVFDRMPEKNDVSWNALL-SAYVQNSK----MEEACMLFKSRENWA----LVSWNC 224
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
++ F K K EAR M D VS++T++ Y + + EA +F E
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDE----- 275
Query: 318 CPL-DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
P+ D+ T M+ Y Q MVEE LF M E N VS+N +L Y + E A
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMA 331
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
LF +M + NV T+NTMI Y + + +A NL +M + + ++++ +I+
Sbjct: 332 KELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAG 383
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM------IVAYERAGLVAHAKRLLHELKR 490
+ ++G A LF ++ G ++++ + + +VA E G H RL+
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE-LGKQLHG-RLVKGGYE 441
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
+++ + +EEA +F++ AG+ DI + MI YSR+ +
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEM--AGK--DIVSWNTMIAGYSRHGFGEVALRF 497
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKA-DALYSQIHDEGCVFPDEVHFQ-MLSLY 608
FE M+ G PD + VL+A +K Y+ D G V P+ H+ M+ L
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG-VMPNSQHYACMVDLL 556
Query: 609 G 609
G
Sbjct: 557 G 557
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ---------MEQDNVSGDLVLYSNLIE 225
Q P R T+ L++H + DSS+ + + +E D V+ D+ + S L E
Sbjct: 115 QPNFRPGRSTFLILLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRS-LCE 171
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN-GVC 284
R +A + L PD YN ++ K K + EMRD+ V
Sbjct: 172 TGR----VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
PD VS++ L+ +++ EA+ + S++ +A D N ++ + L E +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
+ M++ G+EP+ ++YNTL+ ++ EA + M G + + TY +++N +
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
E A +L++EM+ G PN TY+T++ KA +D+ L++ ++SSGV+++
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 465 YQTMIVAYERAGLVAHA 481
Y T++ + ++G VA A
Sbjct: 408 YATLVRSLVKSGKVAEA 424
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 15/322 (4%)
Query: 65 PYHRRTRTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSL-----YNQRQLSIRFMVS 119
P R R+ + L H+ A SS N +H V++L Q++ V
Sbjct: 116 PNFRPGRSTFLILLSHACR-----APDSSISN---VHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GL 178
L A L+ + EK P + YN +L+++ + K H+ + DEMR +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKH-SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 179 APDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAIS 238
PD +++ LI + L +++ + ++ D LY+ +++ L S+A+
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 239 IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
++ ++K + PD I YN++I KA EAR+ L+ M D G PDT +Y++L+
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
+ ALS+ EM C + T N ++ + ++++G L+ M+ G++
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Query: 359 SYNTLLRVYGESELFGEAIHLF 380
Y TL+R +S EA +F
Sbjct: 407 GYATLVRSLVKSGKVAEAYEVF 428
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 17/308 (5%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P ++ +R++ + A L E+ ++ PD YTY+ L+ H K L +
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 205 LQQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ +M D +V DLV ++ LI+ + +A+ + ++L + PD YN+++ F
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
EA + ++M++ GV PD ++Y+TL+ R EA M DA D
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 324 TCNIMI-------DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
T ++ + G L ++EE M G PN +YNTLL ++ L +
Sbjct: 337 TYTSLMNGMCRKGESLGALSLLEE-------MEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
+ L+ +M+ GV+ Y T++ KS + +A + ++ +A YST+ +
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETT 449
Query: 437 --WEKAGK 442
W K K
Sbjct: 450 LKWLKKAK 457
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 176/392 (44%), Gaps = 12/392 (3%)
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAP-DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDN 212
LRN ++ A LF+ + P D +++++ +G +++ ++ Q + +
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 213 VSGDLVLYSNLIELSRKLGDYSKAISIFAR----LKASSIAPDLIAYNSMINVFGKAKLF 268
+ + LI LS +IS R + + + PD + + + +
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNI 327
EA+ L++E+ + PDT +Y+ LL + EM +D DL + I
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+ID + E L + G +P+ YNT+++ + EA+ +++ M+++G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
V+ + +TYNT+I K+ E+A ++ M + G +P+ TY+++++ + G+ A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE-----TAIMV 502
L +++ + G + Y T++ +A L+ L+E+ + + E T +
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME-LYEMMKSSGVKLESNGYATLVRS 414
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
L ++ +V EA VF A + ++D S + +
Sbjct: 415 LVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
+S ++ + + + A+ L+ + A + P F YN +++ + A G++
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGN-AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
+M++ G+ PD+ TY+TLI K G ++ + +L+ M D Y++L+ + G
Sbjct: 290 KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
+ A+S+ ++A AP+ YN++++ KA+L + L + M+ +GV ++ Y+
Sbjct: 350 ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYA 409
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAK 317
TL+ V + + EA VF D+K
Sbjct: 410 TLVRSLVKSGKVAEAYEVFDYAVDSK 435
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
R+ M G+EP+ V+ + +R E+ EA L + + +K + TYN ++
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 403 GKSLEHEKATNLIQEMQNN-GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
K + + EM+++ ++P+ ++++ +I + L A L KL ++G + D
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 462 QVLYQTMIVAY----ERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFR 517
LY T++ + + + V K++ E PD I T I L++A RVEEA +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLR 577
AG D + + ++N R + + + E+M G P+ +L+ K R
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 578 EFEKADALYSQIHDEG 593
+K LY + G
Sbjct: 385 LMDKGMELYEMMKSSG 400
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 163/344 (47%), Gaps = 5/344 (1%)
Query: 117 MVSLLSRETDWQRALALLDWINEK--ALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMR 174
MV +LS+ + L++ + ++ L P +F V+++ A A + DEM
Sbjct: 153 MVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVLDEMP 210
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ G PD Y + L+ KHG + + + M +L +++L+ ++G
Sbjct: 211 KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSLLYGWCRVGKMM 269
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+A + ++ + PD++ Y ++++ + A +A LL++MR G P+ Y+ L+
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+R EA+ VF EM +C D+ T ++ + + +++ + M K G+
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P+ ++Y ++ + + E F E + L M++ ++ YN +I + K E ++A L
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
EM+ NG+ P T+ +I+ G L A+ F+++ + G+
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 189/463 (40%), Gaps = 74/463 (15%)
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRG---LAPDRYTYSTLITHF 192
W ++ Y S+ Y +++ + + +Q+ GL +EMR+ + P+ + L+ F
Sbjct: 136 WAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRF 193
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
++ ++ L +M + D ++ L++ K G A +F ++ +L
Sbjct: 194 ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNL 252
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
+ S++ + + EA+ +L +M + G PD V Y+ LL+ Y + +
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK---------- 302
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
M D Y L MR+ G EPN Y L++ + +
Sbjct: 303 ---------------MADAYDLLR----------DMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
EA+ +F M++ + +VVTY +++ + K + +K ++ +M G+ P+ +TY
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD 492
I+ EK + L +K+R D +Y +I + G V A RL +E++
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 493 NIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFE 552
P +++ +N ++ GC++ + F+
Sbjct: 458 LSPGVDTFVIM---------------------INGLASQGCLL----------EASDHFK 486
Query: 553 KMREVGYFPDS--NVIALVLNAFGKLREFEKADALYSQIHDEG 593
+M G F S + L+LN K ++ E A ++S I +G
Sbjct: 487 EMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 163/356 (45%), Gaps = 8/356 (2%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS 186
W +AL + D + E+ Y P Y +L + ++ Q + A LFDEM + GL P Y+
Sbjct: 104 WLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYT 163
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQ-DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
L+ + + L+D + L +M+ D+ YS L++ + S++ +
Sbjct: 164 ALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PDTVSYSTLLAIYVDNERFV 304
I P+ + N +++ +G+ F + +L +M + C PD + + +L+++ + +
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
S + + + + T NI+I YG+ M ++ + MRK+ +YN ++
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNII 343
Query: 365 RVYGESELFGEAIHL---FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
+ + G+A ++ F M+ +G++ + T+ +IN Y + K + +Q
Sbjct: 344 EAFAD---VGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKF 400
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGL 477
I N Y+ +IS KA L ++ +++ D ++ M+ AYE+ G+
Sbjct: 401 EIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGM 456
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 126/303 (41%), Gaps = 34/303 (11%)
Query: 294 LAIYVDNERFVEALSVFSEMNDAKC--PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
L+ + +++++AL VF + + P + T +++ + G+ +LF M +
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLV-LLGKSGQPNRAQKLFDEMLEE 153
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK-KGVQQNVVTYNTMINIYGKSLEHEK 410
G+EP V Y LL Y S L +A + M+ Q +V TY+T++ + + +
Sbjct: 154 GLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDL 213
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
+L +EM I PN +T + ++S + + G+ D Q+++VL
Sbjct: 214 VDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFD--------------QMEKVL------ 253
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV 530
+ L+ +PD + V +++ + + G +
Sbjct: 254 ----------SDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRT 303
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIH 590
F +I Y + + Y + V E MR++ + ++ ++ AF + + + + + Q+
Sbjct: 304 FNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMR 363
Query: 591 DEG 593
EG
Sbjct: 364 SEG 366
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 117/301 (38%), Gaps = 37/301 (12%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A ++LD + P VF Y+ +L+ + A Q+ L L+ EM +R + P+ T + ++
Sbjct: 178 AFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL 237
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLI-ELSRKLGDYSKAISIFARLKASSI 248
+ +G+ G D L M V N+I + +G S + + + I
Sbjct: 238 SGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 249 APDLIAYNSMINVFGKAKLF-----------------------------------REARL 273
P+ +N +I +GK +++ + L
Sbjct: 298 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+MR G+ DT ++ L+ Y + F + +S + P + N +I
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 417
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ + E +R++ M++ + ++ ++ Y E E + I+ ++K + + V
Sbjct: 418 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY-EKEGMNDKIYYLEQERQKLMDRTVA 476
Query: 394 T 394
T
Sbjct: 477 T 477
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 196/457 (42%), Gaps = 13/457 (2%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P+V +L ++ +A + A + + M G+ PD Y+ L+ K G + ++
Sbjct: 102 HKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+++ME + V Y+ L+ LG ++++ RL +AP+ Y+ ++
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K + EA LL E+ G P+ VSY+ LL + R +A+++F E+ ++
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL---LRVYGESELFGEAIHL 379
+ NI++ EE + L M P+VV+YN L L +G +E +A+ +
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE---QALQV 338
Query: 380 FRLMQKKGVQQNV--VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ M K Q V +YN +I K + + + EM +PN TY+ I S+
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE 497
E K+ A + Q L + Y+++I + R G A +LL+E+ R P
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVND-----ISVFGCMINLYSRNKKYTNVVEVFE 552
L R +E + + E ++ + F MI + ++ +EVFE
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 518
Query: 553 KMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
M E P+ A+++ E E A + ++
Sbjct: 519 MMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
S+ G +PNV LL ++ +AI + LM G+ + Y ++N K
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG 155
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
A L+++M+++G N +TY+ ++ G L+++ ++L G+ + Y
Sbjct: 156 NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYS 215
Query: 467 TMI-VAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFA 521
++ AY+ G A +LL E+ P+ + + + R ++A +FR+ A
Sbjct: 216 FLLEAAYKERG-TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 522 AG 523
G
Sbjct: 275 KG 276
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 44/375 (11%)
Query: 161 KQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLY 220
K W L G M+ G+ PD ++ I K G L + L +++ +S D V
Sbjct: 289 KGWELLMG----MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI-NVFGKAKLFREARLLLQEMR 279
S++I+ K+G +AI + + + P++ Y+S + N+ + R A + QE+
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLR-ASTIFQEIF 400
Query: 280 DNGVCPDTVSYSTLLAIYVDNER-----------------------------------FV 304
+ G+ PD V Y+T++ Y + R
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+A SVF M LD+ T N ++ YG+ H + + L MR GI P+V +YN L+
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
EA + + ++G + + + +I + K + ++A L M + ++
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P+ +T S ++ + KA ++++A +LF KL +G++ D VLY T+I Y G + A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 485 LHELKRPDNIPRETA 499
+ + + +P E+
Sbjct: 641 IGLMVQRGMLPNEST 655
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 217/540 (40%), Gaps = 87/540 (16%)
Query: 84 MDELLASISSTQNEQ-ELHAVMSLYNQRQLSIRFMVSLLS-------RETDWQRALALLD 135
+D LL + E+ L VM + ++ R + ++ S RE AL L
Sbjct: 166 VDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTY 225
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
+++ ++ PS +L+ +LR LA + M RG + S I +
Sbjct: 226 KVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSD 284
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
G D L M+ + D+V ++ I+ K G +A S+ +LK I+ D ++
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
+S+I+ F K EA L+ R + P+ YS+ L+ + A ++F E+ +
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY-------- 367
+G+ P+ V Y T++ Y
Sbjct: 402 -----------------------------------LGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 368 ------------------------GESELFG---EAIHLFRLMQKKGVQQNVVTYNTMIN 400
G FG +A +FR M+ +G++ +VVTYN +++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 401 IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
YGK+ + K LI EM++ GI P+ TY+ +I G +D A + +L G
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 461 DQVLYQTMIVAYERAGLVAHAKRL---LHELK-RPDNIPRETAIMVLARARRVEEATWVF 516
+ + +I + + G A L + +L+ +PD + + +A+R+E+A +F
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP-DSNVIALVLNAFGK 575
+ AG D+ ++ +I+ Y E+ M + G P +S ALVL GK
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGK 666
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P++F Y+ L N+ A +F E+ + GL PD Y+T+I + G D + +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ + L + LI + G S A S+F +K + D++ YN++++ +GK
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAI-----YVD--NE---------------- 301
+ L+ EMR G+ PD +Y+ L+ Y+D NE
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 302 ------------RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
F EA ++ M D + D+ TC+ ++ Y + +E+ LF +
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI-NIYGKSLEH 408
G++P+VV YNTL+ Y +A L LM ++G+ N T++ ++ + GK +
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Query: 409 EK--ATNLIQEM 418
+ A+ L++E+
Sbjct: 671 SETHASMLLEEI 682
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 147/316 (46%), Gaps = 7/316 (2%)
Query: 178 LAPDRYTYSTLITHFGKHG--LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
L P+ + YS+ +++ G L S++F Q++ + + D V Y+ +I+ LG K
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIF--QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A F L S P L +I + +A + + M+ G+ D V+Y+ L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + + + EM A D+ T NI+I ++E + + + + G P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ +++ ++ + + F EA L+ M ++ +VVT + +++ Y K+ EKA L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++ + G++P+ + Y+T+I + G +++A L + G+ ++ + +++ E
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGK 666
Query: 476 GLV---AHAKRLLHEL 488
V HA LL E+
Sbjct: 667 RFVNSETHASMLLEEI 682
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 138/300 (46%), Gaps = 9/300 (3%)
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
L+ ++ I Y ++G L M+ GI P++V++ + ++ EA +
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
++ G+ Q+ V+ +++I+ + K + E+A LI + ++PN YS+ +S
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICS 385
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA 499
G + RA+ +FQ++ G+ D V Y TMI Y G A + L + N P T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 500 IMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
+L +R + +A VFR G D+ + +++ Y + + V E+ ++MR
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDF 614
G PD +++++ ++A+ + S++ G V P + F ++ + R DF
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDF 564
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 44/375 (11%)
Query: 161 KQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLY 220
K W L G M+ G+ PD ++ I K G L + L +++ +S D V
Sbjct: 289 KGWELLMG----MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI-NVFGKAKLFREARLLLQEMR 279
S++I+ K+G +AI + + + P++ Y+S + N+ + R A + QE+
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLR-ASTIFQEIF 400
Query: 280 DNGVCPDTVSYSTLLAIYVDNER-----------------------------------FV 304
+ G+ PD V Y+T++ Y + R
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+A SVF M LD+ T N ++ YG+ H + + L MR GI P+V +YN L+
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
EA + + ++G + + + +I + K + ++A L M + ++
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P+ +T S ++ + KA ++++A +LF KL +G++ D VLY T+I Y G + A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 485 LHELKRPDNIPRETA 499
+ + + +P E+
Sbjct: 641 IGLMVQRGMLPNEST 655
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 217/540 (40%), Gaps = 87/540 (16%)
Query: 84 MDELLASISSTQNEQ-ELHAVMSLYNQRQLSIRFMVSLLS-------RETDWQRALALLD 135
+D LL + E+ L VM + ++ R + ++ S RE AL L
Sbjct: 166 VDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTY 225
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
+++ ++ PS +L+ +LR LA + M RG + S I +
Sbjct: 226 KVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSD 284
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
G D L M+ + D+V ++ I+ K G +A S+ +LK I+ D ++
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
+S+I+ F K EA L+ R + P+ YS+ L+ + A ++F E+ +
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY-------- 367
+G+ P+ V Y T++ Y
Sbjct: 402 -----------------------------------LGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 368 ------------------------GESELFG---EAIHLFRLMQKKGVQQNVVTYNTMIN 400
G FG +A +FR M+ +G++ +VVTYN +++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 401 IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
YGK+ + K LI EM++ GI P+ TY+ +I G +D A + +L G
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 461 DQVLYQTMIVAYERAGLVAHAKRL---LHELK-RPDNIPRETAIMVLARARRVEEATWVF 516
+ + +I + + G A L + +L+ +PD + + +A+R+E+A +F
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP-DSNVIALVLNAFGK 575
+ AG D+ ++ +I+ Y E+ M + G P +S ALVL GK
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGK 666
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P++F Y+ L N+ A +F E+ + GL PD Y+T+I + G D + +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ + L + LI + G S A S+F +K + D++ YN++++ +GK
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAI-----YVD--NE---------------- 301
+ L+ EMR G+ PD +Y+ L+ Y+D NE
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 302 ------------RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
F EA ++ M D + D+ TC+ ++ Y + +E+ LF +
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI-NIYGKSLEH 408
G++P+VV YNTL+ Y +A L LM ++G+ N T++ ++ + GK +
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Query: 409 EK--ATNLIQEM 418
+ A+ L++E+
Sbjct: 671 SETHASMLLEEI 682
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 147/316 (46%), Gaps = 7/316 (2%)
Query: 178 LAPDRYTYSTLITHFGKHG--LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
L P+ + YS+ +++ G L S++F Q++ + + D V Y+ +I+ LG K
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIF--QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A F L S P L +I + +A + + M+ G+ D V+Y+ L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
Y + + + EM A D+ T NI+I ++E + + + + G P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+ +++ ++ + + F EA L+ M ++ +VVT + +++ Y K+ EKA L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++ + G++P+ + Y+T+I + G +++A L + G+ ++ + +++ E
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGK 666
Query: 476 GLV---AHAKRLLHEL 488
V HA LL E+
Sbjct: 667 RFVNSETHASMLLEEI 682
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 138/300 (46%), Gaps = 9/300 (3%)
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
L+ ++ I Y ++G L M+ GI P++V++ + ++ EA +
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
++ G+ Q+ V+ +++I+ + K + E+A LI + ++PN YS+ +S
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICS 385
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA 499
G + RA+ +FQ++ G+ D V Y TMI Y G A + L + N P T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 500 IMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
+L +R + +A VFR G D+ + +++ Y + + V E+ ++MR
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDF 614
G PD +++++ ++A+ + S++ G V P + F ++ + R DF
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDF 564
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 217/461 (47%), Gaps = 52/461 (11%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS--L 202
P F+YN++L +R + A FD M + D +++T+IT + + G ++ + L
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKAREL 177
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAP--DLIAYNSMIN 260
F+ ME++ VS + ++ S IE GD KA F +AP ++A+ +MI
Sbjct: 178 FY-SMMEKNEVSWNAMI-SGYIE----CGDLEKASHFF------KVAPVRGVVAWTAMIT 225
Query: 261 VFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPL 320
+ KAK A + ++M N + V+++ +++ YV+N R + L +F M +
Sbjct: 226 GYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
+ + + + +L ++ G ++ + K + +V + +L+ +Y + G+A LF
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+M+KK +VV +N MI+ Y + +KA L +EM +N I+P+ IT+ ++ A
Sbjct: 343 EVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 441 GKLDRAAMLFQKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRET 498
G ++ F+ + R V+ Y M+ RAG + A +L+ + RP T
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 499 AIMVLARARRVEEATWVFRQAF------AAGEVNDISVFGCMINLYSRNKKYTNVVEVFE 552
+ + VE A + + AAG V + N+Y+ ++ +V V +
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ-------LANIYASKNRWEDVARVRK 511
Query: 553 KMREVGYFPDSNVIALVLNAF----GKLREFEKADALYSQI 589
+M+E SNV+ + ++ K+ F +D ++ ++
Sbjct: 512 RMKE------SNVVKVPGYSWIEIRNKVHHFRSSDRIHPEL 546
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 192/465 (41%), Gaps = 62/465 (13%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSM-INVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
GD A+ +F ++A + I +NS+ I + EA L E+ + PDT S
Sbjct: 75 GDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFS 126
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPL-DLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
Y+ +L+ YV N F +A S F M P D + N MI Y + +E+ LF+SM
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRM-----PFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV-------------------- 388
+E N VS+N ++ Y E +A H F++ +GV
Sbjct: 182 ----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAE 237
Query: 389 --------QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+N+VT+N MI+ Y ++ E L + M GI+PN+ S+ + +
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
L + Q + S + D ++I Y + G + A +L +K+ D + I
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV-VEVFEKM-REVG 558
A+ ++A +FR+ D F ++ L + N+ + FE M R+
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL-LACNHAGLVNIGMAYFESMVRDYK 416
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML-SLYGA---RKDF 614
P + +++ G+ + E+A L + P H + +L GA K+
Sbjct: 417 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSM-------PFRPHAAVFGTLLGACRVHKNV 469
Query: 615 TMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRM 659
+ E EKL N ++ ++ IY +R D +R+ RM
Sbjct: 470 ELAEFAAEKL-LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 153/358 (42%), Gaps = 42/358 (11%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH-GLLDSSLF 203
PS AY VL ++ Q +LA + MR+ GL P + + LI ++ G +D+ L
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+M + D Y LI + G +A +F + AP ++ Y S+IN
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+K EA L+EM+ G+ P+ +YS+L+ + R ++A+ +F EM
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF-EM---------- 287
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
M G PN+V+Y TL+ + + EA+ L M
Sbjct: 288 ------------------------MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK---- 439
+G++ + Y +I+ + + +A N + EM GI PN +T++ + +
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 440 --AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
A RA L+ +RS G+ ++ ++++ + G A +L+ E+ IP
Sbjct: 384 LCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 9/299 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGL--FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
P+V + NV+++ + R + GL F EM +RG PD YTY TLI+ + G +D +
Sbjct: 154 PTVASLNVLIKALCR-NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+M + + + +V Y++LI + +A+ +K+ I P++ Y+S+++
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K +A L + M G P+ V+Y+TL+ ++ EA+ + MN D
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE------SELFGEA 376
+I + + E M GI PN +++N ++ E + A
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRA 392
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
L+ M+ +G+ V T +++ K E +KA L+ E+ +G P+ T+ +I
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 30/373 (8%)
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+ +M+D P +Y T+LAI V+ + A + M + P + + N++I
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 334 QLH-MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNV 392
+ V+ G ++F M K G +P+ +Y TL+ EA LF M +K V
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 393 VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
VTY ++IN S ++A ++EM++ GI+PN TYS+++ K G+ +A LF+
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARR 508
+ + G + + V Y T+I + + A LL + +PD I +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 509 VEEATWVFRQAFAAG------------EVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
EA + G + ++ V G N SR ++ MR
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR------AFTLYLSMRS 401
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM 616
G + + ++ K EF+KA L +I +GC+ P + +++ L G D T+
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI-PSKGTWKL--LIGHTLDKTI 458
Query: 617 V----ESLFEKLD 625
V ++L LD
Sbjct: 459 VGEASDTLLRDLD 471
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 161/355 (45%), Gaps = 9/355 (2%)
Query: 117 MVSLLSRETDWQRALALLDWINEKA----LYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
++ L+ E D ++++A+ D + ++ S F Y +VLR ++ A ++ A L
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGY-MVLR-LVSANKFKAAEDLIVR 76
Query: 173 MRQRGLAPDRYTYSTLITHFGK-HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
M+ ++ +G+ H DS L +M+ + Y ++ + +
Sbjct: 77 MKIENCVVSEDILLSICRGYGRVHRPFDS-LRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL-LLQEMRDNGVCPDTVSY 290
+ A + ++ + P + + N +I + +A L + EM G PD+ +Y
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
TL++ R EA +F+EM + C + T +I+ V+E R M+
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
GIEPNV +Y++L+ + +A+ LF +M +G + N+VTY T+I K + ++
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
A L+ M G++P+A Y +IS + K AA ++ G+ +++ +
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 19/314 (6%)
Query: 281 NGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDV---YGQLHM 337
NG D S+ ++ V +F A + M C + + +I++ + YG++H
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENC---VVSEDILLSICRGYGRVHR 101
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ R+F M+ +P+ +Y T+L + E A ++ M++ G+ V + N
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 398 MINIYGKSLEHEKAT-----NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
+I K+L T + EM G P++ TY T+IS + G++D A LF +
Sbjct: 162 LI----KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARR 508
+ V Y ++I + V A R L E+K P+ + + L + R
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
+A +F A G ++ + +I + +K VE+ ++M G PD+ +
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 569 VLNAFGKLREFEKA 582
V++ F + +F +A
Sbjct: 338 VISGFCAISKFREA 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 31/303 (10%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S L R A L + EK +P+V Y ++ + +K A +EM+ +
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDC-APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ P+ +TYS+L+ K G ++ + M ++V Y+ LI K +A
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ + R+ + PD Y +I+ F FREA L EM G+ P+ ++++ + +
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN--IHV 374
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
NE V L A P T L+ SMR GI
Sbjct: 375 KTSNE-VVRGLC-------ANYPSRAFT-------------------LYLSMRSRGISVE 407
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN-IYGKSLEHEKATNLI 415
V + +L++ + F +A+ L + G + T+ +I K++ E + L+
Sbjct: 408 VETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLL 467
Query: 416 QEM 418
+++
Sbjct: 468 RDL 470
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 198/427 (46%), Gaps = 8/427 (1%)
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM-EQDN 212
LR + R + A LFD MR GL P+ + ++ ++ ++G + + + M +++N
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 213 VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS---IAPDLIAYNSMINVFGKAKLFR 269
V+G YS +++ ++ A+ +F L+ D++ YN+ I++ G+
Sbjct: 174 VTGHT--YSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVY 231
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMI 329
E + + M+ +G ++YS L++I+V R AL V+ EM + K L MI
Sbjct: 232 ETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 330 DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ 389
+ + ++F SM K G++PN+V+ NTL+ G++ G ++ +++ G +
Sbjct: 292 SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP-NAITYSTIISIWEKAGKLDRAAM 448
+ T+N ++ K+ +E L +++ + N Y+T + +K G ++A
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVK 411
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR 508
L ++ SG+ + Y +I A E++ A + + + D P + L R+
Sbjct: 412 LLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC- 470
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
+ + W + D+S++ I+ +++ E++ KMRE+G PD A+
Sbjct: 471 IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAM 530
Query: 569 VLNAFGK 575
+L K
Sbjct: 531 MLQNLKK 537
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 166/390 (42%), Gaps = 37/390 (9%)
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
R A L MR G+ P+ + ++ L+ + N +A +VF M + + T ++M
Sbjct: 124 RSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLM 182
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEP------NVVSYNTLLRVYGESELFGEAIHLFRL 382
+ ++ E R+F R++ EP +VV YNT + + G E ++R+
Sbjct: 183 LKAVAEVKGCESALRMF---RELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRV 239
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M+ G +TY+ +++I+ + E A ++ EM NN I +IS K K
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRET 498
D A +FQ + G++ + V T+I + +AG V ++ LK +PD
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK---------YTNVVE 549
+ L +A R E+ +F + C +N Y N + V+
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSENL--------CCLNEYLYNTAMVSCQKLGYWEKAVK 411
Query: 550 VFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML---S 606
+ +M G ++ LV++A K R+ + A +Y + C P+ + L
Sbjct: 412 LLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCK-PNTFTYLSLVRSC 470
Query: 607 LYGARKDFTMVESLFEKLDSNPNINKKELH 636
++G+ D VE + +K++ + ++ +H
Sbjct: 471 IWGSLWD--EVEDILKKVEPDVSLYNAAIH 498
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%), Gaps = 11/250 (4%)
Query: 110 RQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
R+ ++ M+S ++E W AL + + +K + P++ A N ++ ++ +A + L +
Sbjct: 283 REDAMYAMISACTKEEKWDLALKIFQSMLKKGM-KPNLVACNTLINSLGKAGKVGLVFKV 341
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSG-DLVLYSNLIELSR 228
+ ++ G PD YT++ L+T K + L + +N+ + LY+ + +
Sbjct: 342 YSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ 401
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
KLG + KA+ + ++ S + +YN +I+ K++ + A L+ + M P+T
Sbjct: 402 KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTF 461
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMND--AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+Y +L+ R S++ E+ D K D++ N I + L+
Sbjct: 462 TYLSLV-------RSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYV 514
Query: 347 SMRKMGIEPN 356
MR+MG+EP+
Sbjct: 515 KMREMGLEPD 524
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 137/321 (42%), Gaps = 16/321 (4%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
V YN + R + ++ M+ G TYS L++ F + G + +L
Sbjct: 214 VVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYD 273
Query: 207 QMEQDNVS-GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M + +S + +Y+ +I K + A+ IF + + P+L+A N++IN GKA
Sbjct: 274 EMVNNKISLREDAMYA-MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKA 332
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK-CPLDLTT 324
+ ++ G PD +++ LL R+ + L +F + C L+
Sbjct: 333 GKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYL 392
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N + +L E+ +L + M G+ + SYN ++ +S A+ ++ M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 385 KKGVQQNVVTYNTMIN--IYGKSLEHEKATNLIQEMQN--NGIQPNAITYSTIISIWEKA 440
++ + N TY +++ I+G +L E+++ ++P+ Y+ I
Sbjct: 453 QRDCKPNTFTYLSLVRSCIWG---------SLWDEVEDILKKVEPDVSLYNAAIHGMCLR 503
Query: 441 GKLDRAAMLFQKLRSSGVQID 461
+ A L+ K+R G++ D
Sbjct: 504 REFKFAKELYVKMREMGLEPD 524
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 6/287 (2%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
Y++++ +R + LA ++DEM ++ +I+ K D +L Q M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ + +LV + LI K G +++ LK+ PD +N+++ KA +
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 269 REARLLLQEMR-DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
+ L +R +N C + Y+T + + +A+ + EM + + ++ N+
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+I + + ++ M + +PN +Y +L+R L+ E + K
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL-----KK 485
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
V+ +V YN I+ E + A L +M+ G++P+ T + ++
Sbjct: 486 VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMML 532
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 180/431 (41%), Gaps = 10/431 (2%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
G A+ + ++ S + P LI +N ++N KA +A L++EMR+ G P+ VSY
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF----W 346
+TL+ +AL +F+ MN + TCNI++ Q ++ ++
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
+ ++V L+ ++ +A+ +++ M +K V + V YN +I S
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
A + +M G+ P+ TY+T+IS K GK D A L +++ GV DQ+ Y+
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATWVFRQAFAA 522
+I G V A L + + +P I R A V +
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
G ++ +I+ Y + + + V +MR PD+ L+L A L A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 583 DALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSG 641
LY ++ GC PD + + +++ + ESL ++ + L+++
Sbjct: 495 FQLYDEMLRRGCQ-PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Query: 642 IYERADRLNDA 652
Y R R +A
Sbjct: 554 KYTRLQRPGEA 564
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 182/450 (40%), Gaps = 46/450 (10%)
Query: 119 SLLSRETDWQRALALLDWINEKALYS---PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
S + R+ Q L W+ +K +YS P + +N +L + +A A GL EMR+
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM--------------------------- 208
G +P+ +Y+TLI +D +L+ M
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 209 ------------EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYN 256
Q N D+V+ + L++ K G+ +A+ ++ + ++ D + YN
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 257 SMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
+I + A + +M GV PD +Y+TL++ +F EA + M +
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
D + ++I V + SM K + P V+ +N ++ YG A
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
+ + LM GV+ NV T N +I+ Y K A + EM++ I P+ TY+ ++
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
G L A L+ ++ G Q D + Y ++ G + A+ LL ++
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Query: 497 ETAIMVLA----RARRVEEATWVFRQAFAA 522
++LA R +R EA V+++ A
Sbjct: 545 HVPFLILAKKYTRLQRPGEAYLVYKKWLAT 574
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 152/341 (44%), Gaps = 17/341 (4%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ + +N++ + ++M + G PD TY+TL++ + + G L + +
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ M + V DLV Y++LI+ K G +A F R+ I PD ++YN++I + K
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ ++++ LL EM N V PD + ++ +V R + A++ E+ K +
Sbjct: 354 EGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 325 CNIMIDVYGQLHMVEEG---------DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
C+ +I + + +EG DR+ + + G E +YN L+ + E
Sbjct: 414 CDFLI-----VSLCQEGKPFAAKHLLDRI---IEEEGHEAKPETYNNLIESLSRCDAIEE 465
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
A+ L ++ + + TY +I + + +A +L+ EM ++ ++P++ ++
Sbjct: 466 ALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVY 525
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+ K D+A L D Y +++ A G
Sbjct: 526 GYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 209/488 (42%), Gaps = 28/488 (5%)
Query: 120 LLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA 179
LL ++D RA+ W+ P+V Y ++L ++ +K++ LA E
Sbjct: 86 LLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCE------- 138
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
LI K +D +F + D + D V++ L++ KLG + +
Sbjct: 139 --------LIELTSKKEEVD--VFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRV 188
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
F + S + ++ N ++N K L + + M G+ P+T +++ L ++ +
Sbjct: 189 FREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCN 248
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ F E +M + DL T N ++ Y + ++E L+ M + + P++V+
Sbjct: 249 DSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVT 308
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y +L++ + EA F M +G++ + ++YNT+I Y K +++ L+ EM
Sbjct: 309 YTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEML 368
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVA 479
N + P+ T I+ + + G+L A +LR V I + +IV+ + G
Sbjct: 369 GNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPF 428
Query: 480 HAKRLL--------HELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
AK LL HE K P+ I L+R +EEA + + +V D +
Sbjct: 429 AAKHLLDRIIEEEGHEAK-PETY--NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTY 485
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
+I R + + +M + PDS + ++ + K +F+KA+ L S
Sbjct: 486 RALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAM 545
Query: 592 EGCVFPDE 599
E +F E
Sbjct: 546 EFRIFDPE 553
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 172/389 (44%), Gaps = 48/389 (12%)
Query: 127 WQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA----PDR 182
+ + + D + + PS Y ++ + + H LF E + + L+
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
Y+ + + K G +L L++M+ + LYS LI
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLI------------------ 290
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ-------------------EMRDNGV 283
+A + A +++ + G KL ++ + L+ MR +
Sbjct: 291 -RAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAEL 349
Query: 284 CPDTVSYSTLLAI---YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEE 340
V+ L AI + F EA+ V+ +C T I I+ Y +L +
Sbjct: 350 ---KVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNK 406
Query: 341 GDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN 400
+ LF M K G + VV+Y+ ++ +YG++ +A+ L M+++G + N+ YN++I+
Sbjct: 407 AEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLID 466
Query: 401 IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
++G++++ +A + +EM+ + P+ ++Y+++IS + ++ +L+R L+Q+ R + +I
Sbjct: 467 MHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI 526
Query: 461 DQVLYQTMIVAYERAGLVAHAKRLLHELK 489
D+ + M+ + + + RLL ++K
Sbjct: 527 DRAMAGIMVGVFSKTSRIDELMRLLQDMK 555
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 198/463 (42%), Gaps = 49/463 (10%)
Query: 157 VLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL-----------ITH-------------- 191
++ +K W L + +++R+ PD T S L ITH
Sbjct: 114 LVSSKSWDLLVSVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAV 173
Query: 192 ---------FGKHGLLDSSLFWLQQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
F K + S++ +++Q V Y ++E K+G+ K + +F
Sbjct: 174 SASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQ 233
Query: 242 RLKASSIAPDLIA------YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
K+ ++ +A Y + + K+ EA +L+EM+D G+ + YS L+
Sbjct: 234 EFKSQRLS--FLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIR 291
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ + V +F E K D C ++ +Y + +E + +MRK ++
Sbjct: 292 AFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKV 351
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++ + + F EA+ ++ K+ + VTY IN Y + ++ KA L
Sbjct: 352 TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
EM G + YS I+ ++ K +L A L K++ G + + +Y ++I + RA
Sbjct: 412 DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 476 GLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQ-AFAAGEVNDISV 530
+ A+++ E+KR PD + + I R++ +E ++++ G++ D ++
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI-DRAM 530
Query: 531 FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF 573
G M+ ++S+ + ++ + + M+ G D+ + + LNA
Sbjct: 531 AGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 187/444 (42%), Gaps = 71/444 (15%)
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+ +++R++ PD + S L+ + + +F + S K L ++ + + +
Sbjct: 126 VCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDK-SLAVSASDAAMKGFN 184
Query: 334 QLHMVEEGDRLFWSMRK-MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQ--- 389
+L M ++F +++ +G+EP+ Y ++ + E GE + L Q+ Q
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAH---EKIGENHKVVELFQEFKSQRLS 241
Query: 390 ----QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
++ Y + + KS +A +++EM++ GI ++ YS +I + +A ++
Sbjct: 242 FLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVI 301
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAG-------LVAHAKRLLHELKRPDNIPRET 498
LF++ + D + +++ Y R G +VA ++ ELK D I
Sbjct: 302 TEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKA--ELKVTDCIL--C 357
Query: 499 AIM-VLARARRVEEAT----WVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
AI+ ++ R EA W ++ AG+V + IN Y R +KY +F++
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQV----TYAIAINAYCRLEKYNKAEMLFDE 413
Query: 554 MREVGYFPDSNVIAL--VLNAFGKLREFEKADALYSQIHDEGC----------------- 594
M + G+ D V+A +++ +GK R A L +++ GC
Sbjct: 414 MVKKGF--DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 595 -----------------VFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNPNINKKELH 636
V PD+V + M+S Y K+ L+++ N + +
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA 531
Query: 637 LVVSGIYERADRLNDASRIMNRMN 660
++ G++ + R+++ R++ M
Sbjct: 532 GIMVGVFSKTSRIDELMRLLQDMK 555
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 54/387 (13%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A +FDE+ +R + + +I + +G + M NV D + +++
Sbjct: 93 ARKVFDEIPERNV----IIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
G I ++ L N +++++GK EARL+L EM
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR---- 204
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD------------------------ 321
D VS+++L+ Y N+RF +AL V EM K D
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 322 ---------LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
L + N+MI VY + M E L+ M G EP+ VS ++L G++
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 373 --FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
G+ IH + +++K + N++ N +I++Y K EKA ++ + M++ + +++
Sbjct: 325 LSLGKKIHGY--IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV----VSW 378
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+ +IS + +G+ A LF KL+ SG+ D + + T + A AGL+ + +
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 491 PDNI-PR--ETAIMV--LARARRVEEA 512
I PR A MV L RA +V+EA
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEA 465
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
S+ ++NV++ ++ A L+ M G PD + ++++ G L
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+E+ + +L+L + LI++ K G KA +F +K+ D++++ +MI+ +G +
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR----DVVSWTAMISAYGFS 388
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA-KCPLDLTT 324
+A L +++D+G+ PD++++ T LA E S F M D K L
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL---RVYGESEL-FGEAIHLF 380
M+D+ G+ V+E R ++ M +EPN + LL RV+ ++++ A LF
Sbjct: 449 LACMVDLLGRAGKVKEAYRF---IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+L ++ Y + NIY K+ E+ TN+ M++ G++ N
Sbjct: 506 QLAPEQSGY-----YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/410 (18%), Positives = 164/410 (40%), Gaps = 50/410 (12%)
Query: 258 MINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
++ + K AR + E+ + V + + ++ YV+N + E + VF M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNV----IIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
D T ++ + G ++ S K+G+ + N L+ +YG+ EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA- 194
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA---------- 427
RL+ + +++VV++N+++ Y ++ + A + +EM++ I +A
Sbjct: 195 ---RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 428 -----------------------ITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
++++ +I ++ K A L+ ++ + G + D V
Sbjct: 252 SNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVS 311
Query: 465 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPR---ETAIM-VLARARRVEEATWVFRQAF 520
+++ A ++ K++ ++R IP E A++ + A+ +E+A R F
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA----RDVF 367
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
+ D+ + MI+ Y + + + V +F K+++ G PDS L A E
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 581 KADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPN 629
+ + + + D + P H M+ L G + + PN
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 202/418 (48%), Gaps = 20/418 (4%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P +F NV++ ++ + AH LFD+M QR + +++T+I+ + K + +L
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKAL 147
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L M +DNV ++ YS+++ R S + + + D+ +++I+VF
Sbjct: 148 ELLVLMLRDNVRPNVYTYSSVL---RSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K +A + EM V D + +++++ + N R AL +F M A +
Sbjct: 205 AKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T ++ L ++E G + + K + +++ N L+ +Y + +A+ +F
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
M+ +++V+T++TMI+ ++ ++A L + M+++G +PN IT ++ AG
Sbjct: 319 MK----ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 443 LDRAAMLFQKLRS-SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRETAI 500
L+ F+ ++ G+ + Y MI +AG + A +LL+E++ PD + T +
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
R + A + ++ A + D + + N+Y+ ++K+ +V E+ +MR+ G
Sbjct: 435 GACRVQRNMVLAEYAAKKVIAL-DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRG 491
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 155/374 (41%), Gaps = 79/374 (21%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH-GLFDEMRQ 175
M+S S+ Q+AL LL + + P+V+ Y+ VLR+ + H G+ E
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVLRSCNGMSDVRMLHCGIIKE--- 188
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
GL D + S LI F K G + +L +M V+GD ++++++I +
Sbjct: 189 -GLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDV 243
Query: 236 AISIFARLK-ASSIAP--------------------------------DLIAYNSMINVF 262
A+ +F R+K A IA DLI N++++++
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMY 303
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
K +A + +M++ D +++ST+++ N EAL +F M + +
Sbjct: 304 CKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKM-GIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
T ++ ++E+G F SM+K+ GI+P Y ++ + G++ +A+ L
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 382 LMQKKG-------------VQQNVV------------------TYNTMINIYGKSLEHEK 410
M+ + VQ+N+V TY + NIY S + +
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 411 ATNLIQEMQNNGIQ 424
+ M++ GI+
Sbjct: 480 VEEIRTRMRDRGIK 493
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
V EG+ + + G P + N L+ +Y + L +A LF M Q+NV+++ T
Sbjct: 77 VHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP----QRNVISWTT 132
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
MI+ Y K H+KA L+ M + ++PN TYS++ LRS
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV-------------------LRSCN 173
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFR 517
D + I+ + GL D R I V A+ E+A VF
Sbjct: 174 GMSDVRMLHCGII---KEGL------------ESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLR 577
+ D V+ +I +++N + +E+F++M+ G+ + + VL A L
Sbjct: 219 EMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 578 EFE 580
E
Sbjct: 275 LLE 277
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/537 (21%), Positives = 235/537 (43%), Gaps = 29/537 (5%)
Query: 83 DMDELLASISSTQNEQ--ELHAVMSLYNQRQLS------IRFMVSLLSRETDWQRALALL 134
D ++A++ S + E+ LH + L Q +V ++ D Q A ++
Sbjct: 112 DALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVI 171
Query: 135 DWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK 194
+ + + SV A N + +L + ++ EM G + T++ +I F K
Sbjct: 172 EQTRAEG-FCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 195 HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS---IAPD 251
L +L +M + V ++V ++ +I+ + K GD A+ + ++ S ++P+
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS 311
+ YNS+IN F KA A + +M +GV + +Y L+ Y EAL +
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 312 EMNDAKCPLDLTTCNIMI-------DVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
EM ++ N ++ D+ G + ++ + M ++ + + ++
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD-------MNSKNMQIDRFTQAIVV 403
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
R + EA+ R + +K + +++V +NT+++ + + + A ++ M G+
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
+AI++ T+I + K GKL+RA ++ + + V+Y +++ + G+ A+ +
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 485 LHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV--FGCMINLYSRNK 542
++ ++ D + T + + VEEA + + +S+ F MIN +
Sbjct: 524 VNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFG 583
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE 599
Y EV + M E G PDS ++ +F K R EK L+ + +G V P E
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQG-VTPHE 639
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 173/397 (43%), Gaps = 43/397 (10%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKA--LYSPSVFAYNVVLRNVLRAKQWHLAHGL 169
+S M+ + D + AL LL + + SP+ YN V+ +A + LA +
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
+M + G+ + TY L+ +G+ G D +L +M + + V+Y++++
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 230 LGDYSKAISI----------------------------------FAR-LKASSIAPDLIA 254
GD A+S+ F R + + D++
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVC 433
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
+N++++ F + K A +L M G+ D +S+ TL+ Y+ + AL ++ M
Sbjct: 434 HNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI 493
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+L N +++ + M + + +M ++V+YNTLL ++
Sbjct: 494 KMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVE 549
Query: 375 EAIHLFRLMQKKGVQQNV--VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
EA + MQK+ +++V VT+N MIN K +EKA +++ M G+ P++ITY T
Sbjct: 550 EADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGT 609
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+I+ + K ++ L L GV + +Y +++
Sbjct: 610 LITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 219/500 (43%), Gaps = 92/500 (18%)
Query: 126 DWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
D + A L D ++ + +V + ++ LR+KQ +A LF EM +R + ++
Sbjct: 92 DMREARELFDRVDSRK----NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SW 143
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+T+I + + G +D +L +M + N+ V ++++++ + G +A+++F R+
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
D++++ +M++ K EAR L M + + +S++ ++ Y N R E
Sbjct: 200 R----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDE 251
Query: 306 ALSVFS---------------------EMNDAKCPL-------DLTTCNIMIDVYGQLHM 337
A +F EMN A C L ++ + MI Y +
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREMNKA-CGLFDRMPEKNVISWTTMITGYVENKE 310
Query: 338 VEEGDRLFWSMRKMG-IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYN 396
EE +F M + G ++PNV +Y ++L + E + +L+ K Q+N + +
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGI--QPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
++N+Y KS E A ++M +NG+ Q + I+++++I+++ G A ++ ++R
Sbjct: 371 ALLNMYSKSGELIAA----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP-RETAIMVL----ARARRV 509
G + V Y ++ A AGLV +L R +++P RE L RA R+
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Query: 510 EEAT----------------------WVFRQAFAAGEV---------NDISVFGCMINLY 538
++ T V + A EV +D + M N+Y
Sbjct: 487 KDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIY 546
Query: 539 SRNKKYTNVVEVFEKMREVG 558
+ N K E+ KM+E G
Sbjct: 547 AANGKREEAAEMRMKMKEKG 566
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 191/450 (42%), Gaps = 100/450 (22%)
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
D+V ++++I KLGD +A +F R+ + +++ + +M++ + ++K A +L
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND-------------------- 315
QEM + V VS++T++ Y + R +AL +F EM +
Sbjct: 133 QEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRID 188
Query: 316 ------AKCP-LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ P D+ + M+D + V+E RLF M E N++S+N ++ Y
Sbjct: 189 EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYA 244
Query: 369 ESELFGEAIHLFRLMQKKGV---------------------------QQNVVTYNTMINI 401
++ EA LF++M ++ ++NV+++ TMI
Sbjct: 245 QNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITG 304
Query: 402 YGKSLEHEKATNLIQEMQNNG-IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
Y ++ E+E+A N+ +M +G ++PN TY +I+S L + Q + S Q
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 461 DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAF 520
++++ ++ Y ++G + A+++ DN +V R
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMF------DN------GLVCQR--------------- 397
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
D+ + MI +Y+ + +E++ +MR+ G+ P + +L A E
Sbjct: 398 ------DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVE 451
Query: 581 KADALYSQ-IHDEGCVFPDEVHFQMLSLYG 609
K + + DE +E + ++ L G
Sbjct: 452 KGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
K + +P++ +N+++ ++ A G+ +++ G+ D Y+TLI+ K G +D
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
+ QM V +L + LI+ + G +KA + L++ ++ PD + +N++I
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI 579
Query: 260 NVFGKAKLFREARLLLQEMR--DNGVCPDTVSYSTLLAIYVDN---ERFVE--------- 305
+ G++ A +L EM+ + + PD +S L+ + ER E
Sbjct: 580 SACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 306 -----------------------ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
A S++ +M + D + +IDV G M++E
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
+ + GI +SY++L+ ++ + +A+ L+ ++ ++ + T N +I
Sbjct: 700 GILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
+ + KA + E++ G++PN ITYS ++ E+ + + L + + GV +
Sbjct: 760 CEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Query: 463 VLYQTMIVAYER 474
++ + + +R
Sbjct: 820 IMCRCITSLCKR 831
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 161/362 (44%), Gaps = 41/362 (11%)
Query: 87 LLASISSTQNEQELHAVMSLYNQRQLS--IRFMVSLLSRETDWQRALALLDWINE--KAL 142
L++ +S+Q+ + V+ L + ++ + +L+S + A+ + ++ +
Sbjct: 473 LMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSG 532
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
++ + ++ RA Q A G + +R + + PDR ++ LI+ G+ G +D +
Sbjct: 533 VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 203 FWLQQM-------EQDNVS------------------------------GDLVLYSNLIE 225
L +M + D++S G +Y+ +
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
K GD+ A SI+ +K + PD + ++++I+V G AK+ EA +LQ+ + G+
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRL 712
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
T+SYS+L+ + + + +AL ++ ++ K ++T N +I + + + +
Sbjct: 713 GTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYL 772
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
++ +G++PN ++Y+ L+ + F + L + GV N++ + ++ +
Sbjct: 773 DEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRR 832
Query: 406 LE 407
E
Sbjct: 833 FE 834
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
K+ + P + ++N L+ V S+ A + RL+Q+ G+ + Y T+I+ KS + +
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+ +M N+G++ N T+ +I +AG++ +A + LRS V+ D+V++ +I
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI 579
Query: 470 VAYERAGLVAHAKRLLHELKR------PDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
A ++G V A +L E+K PD+I + A +VE A V++ G
Sbjct: 580 SACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
V+ +N S++ + +++ M+E PD + +++ G + ++A
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
Query: 584 ALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDS 626
+ +G + ++ KD+ L+EK+ S
Sbjct: 700 GILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/423 (18%), Positives = 182/423 (43%), Gaps = 39/423 (9%)
Query: 194 KHGLLDSSLFWLQQMEQ-DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
+ G + + L+ ++Q D + D + +++ + +K +A+ R + P +
Sbjct: 412 RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKK----QRAVKEAFRFTKLILNPTM 467
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
+N +++V ++ AR +L+ ++++G+ D Y+TL++ + + VF +
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
M+++ +L T +ID + V + + +R ++P+ V +N L+ G+S
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 373 FGEAIHLFRLMQKK--GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITY 430
A + M+ + + + ++ ++ + + E+A + Q + GI+ Y
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY 647
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+ ++ K+G D A +++ ++ V D+V + +I + HAK L
Sbjct: 648 TIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI------DVAGHAKML------ 695
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
+ A +L A+ Q G ++ S+ G N K + +E+
Sbjct: 696 ------DEAFGILQDAK---------SQGIRLGTISYSSLMGACCNA----KDWKKALEL 736
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGA 610
+EK++ + P + + ++ A + + KA +I G + P+ + + ML L
Sbjct: 737 YEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLG-LKPNTITYSMLMLASE 795
Query: 611 RKD 613
RKD
Sbjct: 796 RKD 798
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 122/237 (51%), Gaps = 1/237 (0%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDN-GVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
++N++++ + +K EA +E+ + G+ PD V+Y+T++ + LS+F E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
+ DL + N +++ + + + EGDR++ M+ + PN+ SYN+ +R ++
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
F +A++L +M+ +G+ +V TYN +I Y E+ EM+ G+ P+ +TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
+I + K G LDRA + ++ + +Y+ ++ AG + A +L+ K
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 136/293 (46%), Gaps = 38/293 (12%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM-EQDNVSGDLVLYSNLI 224
AH LFDEM + +++ L++ + LD ++ +++ E+ ++ DLV Y+ +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 225 ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
+ + G +SIF L+ + PDLI++N+++ F + +LF E + M+ +
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P+ SY++ + N++F +AL+ +IDV
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALN-------------------LIDV------------- 288
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
M+ GI P+V +YN L+ Y E + + M++KG+ + VTY +I + K
Sbjct: 289 ---MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ--KLRS 455
+ ++A + +E + + Y ++ AGK+D A L + KL+S
Sbjct: 346 KGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQS 398
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 44/256 (17%)
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM-RKMGIEPNVVSYNTLL 364
A +F EM + C + + N ++ Y ++E + F + K+GI P++V+YNT++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 365 RV-----------------------------------YGESELFGEAIHLFRLMQKKGVQ 389
+ + ELF E ++ LM+ K +
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 390 QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAML 449
N+ +YN+ + ++ + A NLI M+ GI P+ TY+ +I+ + L+
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 450 FQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRETAIMVL 503
+ +++ G+ D V Y +I + G + A + E L RP+ + + L
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY--KPVVERL 378
Query: 504 ARARRVEEATWVFRQA 519
A +++EAT + +
Sbjct: 379 MGAGKIDEATQLVKNG 394
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+ + EK +P + YN +++ + R +F+E+ + G PD +++TL+
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 190 THFGKHGL-LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI 248
F + L ++ W M+ N+S ++ Y++ + + ++ A+++ +K I
Sbjct: 236 EEFYRRELFVEGDRIW-DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGI 294
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
+PD+ YN++I + E EM++ G+ PDTV+Y L+ + A+
Sbjct: 295 SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVE 354
Query: 309 VFSE 312
V E
Sbjct: 355 VSEE 358
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN- 421
++ +YG S + A LF M + ++ V ++N +++ Y S + ++A +E+
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
GI P+ +TY+T+I + G +D +F++L +G + D + + T++ + R L
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 482 KRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRN 541
R+ +K + P +I + + +RN
Sbjct: 248 DRIWDLMKSKNLSP-------------------------------NIRSYNSRVRGLTRN 276
Query: 542 KKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVH 601
KK+T+ + + + M+ G PD + ++ A+ E+ Y+++ ++G PD V
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT-PDTVT 335
Query: 602 FQML-SLYGARKDFTMV-----ESLFEKLDSNPNINK 632
+ ML L + D E++ KL S PN+ K
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/544 (21%), Positives = 220/544 (40%), Gaps = 62/544 (11%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+ AL W L + +++ + + + A + +M ++G+ D +
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVV 190
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
LI +GK G++ S+ Q+M+ V + Y++L ++ + G Y A F ++ +
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
+ P YN M+ F + A ++M+ G+ PD +++T++ + ++ EA
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
+F EM K + + MI Y + V++G R+F MR GIEPN +Y+TLL
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 368 GESELFGEAIHLFRLMQKKGV--QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
++ EA ++ + M K + + N + +++ K+ + AT +++ M +
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS-QSKAGDMAAATEVLKAMATLNVPA 429
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
A Y +I KA +RA L L E+ ++ H L
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTL------------------IEKEIILRHQDTLE 471
Query: 486 HELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
E + I I L + +A +FRQ G V D +I +++
Sbjct: 472 MEPSAYNPI-----IEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPD 525
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+ E+ + M G +SN L++ ++ E A + ++G V PD F+
Sbjct: 526 SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHV-PDSSLFR-- 582
Query: 606 SLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
+++ESLFE R+ ASR+M M K +G
Sbjct: 583 ---------SVIESLFED-----------------------GRVQTASRVMMIMIDKNVG 610
Query: 666 NHDH 669
D+
Sbjct: 611 IEDN 614
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 29/318 (9%)
Query: 145 PSVFA-----YNVVLRNVLRAKQWHLAHGLFDEMRQ---RGLAPDRYTYSTLITHFGKHG 196
P VFA Y +++ ++ + + + MR+ R PD TY+T+++ F G
Sbjct: 407 PKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAG 466
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-KASSIAPDLIAY 255
L+D + L +M + V + + Y+ L++ K +A + + + + I PD+++Y
Sbjct: 467 LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-N 314
N +I+ A EMR G+ P +SY+TL+ + + + A VF EM N
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
D + +DL N++++ Y +L ++E+ R+ M++ G PNV +Y +L ++ G
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 375 EAIHLFRLMQKKG-------------------VQQNVVTYNTMINIYGKSLEHEKATNLI 415
+A+ L++ ++++ ++ + +T+ +I ++ +KA +I
Sbjct: 647 DALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEII 706
Query: 416 QEMQNNGIQPNAITYSTI 433
M+ NGI PN Y I
Sbjct: 707 ACMEENGIPPNKTKYKKI 724
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
RA LL + E A P V +YN+++ + A F+EMR RG+AP + +Y+TL
Sbjct: 505 RAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTL 564
Query: 189 ITHFGKHGLLD-SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
+ F G ++ + + M V DL+ ++ L+E +LG A + +R+K +
Sbjct: 565 MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-------------------PDTV 288
P++ Y S+ N +A+ +A LL +E+++ PD
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEG 684
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
TL I V F +AL + + M + P + T +Y ++H
Sbjct: 685 LLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYK---KIYVEMH 729
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/427 (19%), Positives = 167/427 (39%), Gaps = 47/427 (11%)
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
D ++ ++ LGD K +F + PD++ YN MI + + +L
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVL 294
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVD------NERFVEAL--------SVFSEMN------- 314
+ + D G+ + +L+A YV ER V+A+ V E N
Sbjct: 295 ERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEK 354
Query: 315 -----------------DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNV 357
D + ++DV+ +L + P+
Sbjct: 355 EEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDS 414
Query: 358 VSYNTLLRVYGESELFGEAIHLFRLMQK---KGVQQNVVTYNTMINIYGKSLEHEKATNL 414
Y TL++ Y ++ + + M++ + + VTY T+++ + + ++A +
Sbjct: 415 RIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQV 474
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL-RSSGVQIDQVLYQTM----I 469
+ EM G+ N ITY+ ++ + K ++DRA L +++ +G++ D V Y + I
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN-DI 528
+ + AG +A + P I T + A + + + A VF + V D+
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ ++ Y R + V +M+E G++P+ + N + R+ A L+ +
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Query: 589 IHDEGCV 595
I + V
Sbjct: 655 IKERCAV 661
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 52/420 (12%)
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG---DYS 234
L D Y ++LI + K L + +++ + D+VL++ +IE +LG +
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDA----RKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 235 KAISIFARLKASSIAP-----------------------------------DLIAYNSMI 259
+A++IF ++ I P D+ A +++I
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+V+ +++RL+ EM+ D V ++++ A YV EAL++F E+ ++
Sbjct: 497 DVYSNCYCLKDSRLVFDEMK----VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER 552
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D T M+ G L V+ G + K G+E N N LL +Y + +A
Sbjct: 553 PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
F ++VV +N++I+ Y E +KA ++++M + GI+PN IT+ ++S
Sbjct: 613 F----DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRET 498
AG ++ F+ + G++ + Y M+ RAG + A+ L+ ++ +P I +
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ A+A VE A A + + D F + N+Y+ +T +V E+M+ G
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILS-DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 164/400 (41%), Gaps = 15/400 (3%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
K+ + V+ +++ L+ A +FD + ++ T++T+I+ K G
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV----TWTTMISGCVKMGRSY 231
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
SL Q+ +DNV D + S ++ L I A + + D N +I
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+ + K A L M + + +S++TLL+ Y N EA+ +F+ M+
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNI----ISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D+ C+ ++ LH + G ++ K + + N+L+ +Y + + +A +
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 380 FRLMQKKGVQQNVVTYNTMINIY---GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
F + +VV +N MI Y G E +A N+ ++M+ I+P+ +T+ +++
Sbjct: 408 FDIF----AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
L + + + G+ +D +I Y + ++ + E+K D +
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMIN 536
+ + EEA +F + + E D F M+
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/543 (19%), Positives = 240/543 (44%), Gaps = 52/543 (9%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
F + +R + A +FD M + D T S L+ + + G L+ + L +
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
ME + ++V ++ ++ + G + +A+ +F ++ PD + +S++ G +++
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
RL+ + G+ D S ++ +Y + +S+F++ ++ CN
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE----MMEAGVCNA 323
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
I + +V++ +F ++ +E NVVS+ +++ ++ EA+ LFR MQ G
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 388 VQQNVVTYNTMINIYGK--SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
V+ N VT +M+ G +L H ++T+ + + N S +I ++ K G+++
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH--LLDNVHVGSALIDMYAKCGRINL 441
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIM 501
+ ++F + + + V + +++ + G + L R PD I + +
Sbjct: 442 SQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 502 VLARARRVEEATWVFRQAFAA--GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
+ +E W + + + G + + CM+NL R K + E ++ ++E+ +
Sbjct: 498 ACGQVGLTDEG-WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGK---LQEAYDLIKEMPF 553
Query: 560 FPDSNVIALVLNAFG-----KLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDF 614
PDS V +LN+ L E + + + G + + ++Y A+ +
Sbjct: 554 EPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG------TYVLLSNIYAAKGMW 607
Query: 615 TMVESLFEKLDS-----NPNIN----KKELHLVVSG------IYERADRLNDASRIMNRM 659
T V+S+ K++S NP + K ++ +++G I + +++++ S+ M +
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 660 NHK 662
H+
Sbjct: 668 GHR 670
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/529 (19%), Positives = 215/529 (40%), Gaps = 89/529 (16%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ G D Y + LI + + + + LQ + + +S+LI K ++
Sbjct: 43 KSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYS----FSSLIYALTKAKLFT 98
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
++I +F+R+ + + PD ++ V + F+ + + +G+ D ++
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+Y+ R +A VF M+D D+ TC+ ++ Y + +EE R+ M GIE
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLF-------------------------------RLM 383
N+VS+N +L + S EA+ +F RL+
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 384 Q----KKGVQQNVVTYNTMINIYGKS---------------LEHEKATNLIQEMQNNGI- 423
K+G+ ++ + MI++YGKS +E I + NG+
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 424 ---------------QPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ N +++++II+ + GK A LF++++ +GV+ + V +M
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 469 IVAYERAGLVAHAKRL------LHELKRPDNIPRETAIM-VLARARRVEEATWVFRQAFA 521
+ A + H + +H L DN+ +A++ + A+ R+ + VF
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLL---DNVHVGSALIDMYAKCGRINLSQIVFNMM-- 449
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
++ + ++N +S + K V+ +FE + PD +L+A G++ ++
Sbjct: 450 --PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 582 ADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPN 629
+ + +E + P H+ M++L G L +++ P+
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 180/405 (44%), Gaps = 18/405 (4%)
Query: 105 SLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWH 164
S Y+Q+ + +L DWQ+AL +W+ ++ + + +N V+ + + ++
Sbjct: 43 SSYDQKTVC----EALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFE 98
Query: 165 LAHGLFDEM-RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNL 223
++ L + M P+ T+ + + L+ ++ +++ N+ + Y NL
Sbjct: 99 ISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFY-NL 157
Query: 224 IELSRKLGDYSKAISIFARLKASSIAPDLIA------YNSMINVFGKAKLFREARLLLQE 277
++ L ++ + ++ + + +N ++ + K + + + ++
Sbjct: 158 VD---ALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKK 214
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
M GV D SYS + I + + +A+ ++ EM + LD+ N +I G
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
VE G R+F MR+ G EPNV ++NT++++ E +A + M K+G Q + +TY
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+ + K E +L M +G++P TY ++ +E+ G L +++ ++ SG
Sbjct: 335 LFSRLEKPSE---ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
D Y +I A + G++ A+ E+ PR +V
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELV 436
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 169/374 (45%), Gaps = 22/374 (5%)
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKL 267
+Q V L YSN D+ KA+ F + + S +N +I++ GK
Sbjct: 46 DQKTVCEALTCYSN---------DWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFE 96
Query: 268 FREARLLLQEMRDNG-VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
F + L+ M N P+ V++ + YV EA+ + +++D D T+
Sbjct: 97 FEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFY 155
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMG---IEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
++D + V E + L + +G N +N +LR + + +G+ ++ M
Sbjct: 156 NLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKM 215
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+GV +++ +Y+ ++I KS + KA L +EM++ ++ + + Y+T+I + +
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETA 499
+ +F+++R G + + + T+I G + A R+L E+ + PD+I T
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSI---TY 332
Query: 500 IMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
+ + +R + E +F + +G + + ++ + R V+ V++ M+E G
Sbjct: 333 MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGD 392
Query: 560 FPDSNVIALVLNAF 573
PDS V++A
Sbjct: 393 TPDSAAYNAVIDAL 406
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 165/347 (47%), Gaps = 8/347 (2%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
YN++I GK K F+ L+ +M+ + +++ + Y + EA+ F +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+ ++ + N M+D + V + ++F M+K EP++ SY LL +G+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+ R M+ +G + +VV Y +IN + K+ ++E+A EM+ +P+ + ++I
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----R 490
+ KL+ A F++ +SSG ++ Y ++ AY + + A + + E++
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P+ + + L R +R +EA V++ V S + M+ ++ ++ +++
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTV---STYEIMVRMFCNKERLDMAIKI 426
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
+++M+ G P ++ + ++ A + ++A ++++ D G P
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 157/346 (45%), Gaps = 12/346 (3%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
AL++ W + + + YN ++ ++ + KQ+ L L D+M+ + L + T++ +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL-SKETFALIS 169
Query: 190 THFGKHGLLDSSLFWLQQMEQDNV---SGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
+ + + ++ +ME+ S D + + SR +GD K +F ++K
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQK---VFDKMKKK 226
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
PD+ +Y ++ +G+ + +EM+D G PD V+Y ++ + +++ EA
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 307 LSVFSEMNDAKC-PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
+ F+EM C P C+ +I+ G + + F + G +YN L+
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCS-LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 366 VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
Y S+ +A M+ KGV N TY+ +++ + ++A + Q M +P
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEP 402
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
TY ++ ++ +LD A ++ +++ GV ++ ++I A
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 141/346 (40%), Gaps = 57/346 (16%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLR------NVLRAKQWHLAHGLF 170
M+ LS+ + A + D + +K + P + +Y ++L N+LR + +
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKR-FEPDIKSYTILLEGWGQELNLLRVDEVN------ 255
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE---LS 227
EM+ G PD Y +I K + ++ + +MEQ N ++ +LI
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
+KL D A+ F R K+S + YN+++ + ++ +A + EMR GV P+
Sbjct: 316 KKLND---ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
Query: 288 VSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
+Y +L + +R EA V+ M +C
Sbjct: 373 RTYDIILHHLIRMQRSKEAYEVYQTM----------SC---------------------- 400
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
EP V +Y ++R++ E AI ++ M+ KGV + ++++I +
Sbjct: 401 ------EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
++A EM + GI+P +S + G+ D+ L K+
Sbjct: 455 LDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/291 (18%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 376 AIHLFRLMQ-KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A+ +F+ + +KG + YN +I GK + + +L+ +M+ + T++ I
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALIS 169
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+ +A K+ A F K+ G +++ + M+ ++ V A+++ ++K+
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK---- 225
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
+R E DI + ++ + + V EV +M
Sbjct: 226 ------------KRFEP---------------DIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 555 REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDF 614
++ G+ PD +++NA K +++E+A ++++ C + +++ G+ K
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 615 TMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAIG 665
FE+ S+ + + + G Y + R+ DA + ++ M K +G
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 187/455 (41%), Gaps = 50/455 (10%)
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRK 229
F M L PD +T+ +L+ L L QQ+ + S D + S+L+ L K
Sbjct: 34 FSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK 93
Query: 230 LGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
G + A +F ++ D++ + +MI + +A + EA L+ EMR G+ P V+
Sbjct: 94 FGLLAHARKVFEEMRER----DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
+E LS E+ +C D +Y
Sbjct: 150 -------------LLEMLSGVLEITQLQCLHDFAV------IY----------------- 173
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
G + ++ N++L +Y + + G+A LF M+ Q+++V++NTMI+ Y
Sbjct: 174 --GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME----QRDMVSWNTMISGYASVGNMS 227
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+ L+ M+ +G++P+ T+ +S+ L+ ML ++ +G +D L +I
Sbjct: 228 EILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI 287
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
Y + G + R+L + D + I L R R E+A VF + +G
Sbjct: 288 TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
++ ++ + V + GY D+ + ++ + K +K+ ++ ++
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 590 HDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
++ V + + +S Y D LFE++
Sbjct: 408 NERDLVSWNAI----ISGYAQNVDLCKALLLFEEM 438
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 166/416 (39%), Gaps = 56/416 (13%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
L MR GL PD+ T+ ++ G L+ Q+ + D+ L + LI +
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
K G + + + D++ + MI+ + +A ++ EM +G +
Sbjct: 292 KCGKEEASYRVLETIPN----KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+ ++++A F SV + LD N +I +Y + +++ +F M
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ----NVVTY--------- 395
E ++VS+N ++ Y ++ +A+ LF M+ K VQQ VV+
Sbjct: 408 N----ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 396 -----------------------NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYST 432
++++Y K E A + + +++
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS----WKDVVSWGI 519
Query: 433 IISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-- 490
+I+ + GK D A ++ + SG++ + V++ ++ + G+V ++ + R
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDF 579
Query: 491 ---PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
P++ + +L RA+R+E+A +++ F ++ V G +++ N K
Sbjct: 580 GVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID---VLGIILDACRANGK 632
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
+Y+ ++ K GD KA+ + R+ PD+ +N +IN + ++ F A L +EM
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
++ G P+ VS++TL+ ++ + + E + + EM + C TC I++D + V
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLL-RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
++ L + + P+ Y +L+ ++ GE++ A+ + + KKG + T
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV-RAMEMMEELWKKGQTPCFIACTT 373
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
++ KS EKA+ +++M N GI P+++T++ ++ + A L S G
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
+ D+ Y ++ + + G + L++E+ D +P
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 138/324 (42%), Gaps = 38/324 (11%)
Query: 159 RAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
RA++ A FD M++ P+ Y+T++ + K G +D +L + Q+M ++ D+
Sbjct: 169 RARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDV 228
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF---GKAK-------- 266
++ LI + + A+ +F +K P+++++N++I F GK +
Sbjct: 229 CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 267 -------------------LFREARL-----LLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
L RE R+ L+ ++ + V P Y +L+ +
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENK 348
Query: 303 FVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
V A+ + E+ + P C +++ + E+ M GI P+ V++N
Sbjct: 349 AVRAMEMMEELWKKGQTPC-FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
LLR S+ +A L L KG + + TY+ +++ + K ++ L+ EM +
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 422 GIQPNAITYSTIISIWEKAGKLDR 445
+ P+ TY+ ++ GK R
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 133/308 (43%), Gaps = 13/308 (4%)
Query: 310 FSEMNDAKCPLDLTTCNIM-------IDVYGQLHMVEEGDRLFWSMRKM-GIEPNVVSYN 361
F N C + +C + ID Y + ++ F +M+++ +PNV YN
Sbjct: 138 FVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYN 197
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
T++ Y +S +A+ ++ M K+ + +V T+N +IN Y +S + + A +L +EM+
Sbjct: 198 TVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
G +PN ++++T+I + +GK++ + ++ G + + + ++ R G V A
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 482 KRLLHELKRPDNIPRE----TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
L+ +L +P E + + L + A + + + G+ ++
Sbjct: 318 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
++ + EKM G PDS L+L A+ L +G P
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG-YEP 436
Query: 598 DEVHFQML 605
DE + +L
Sbjct: 437 DETTYHVL 444
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 5/277 (1%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N +++ Y + +++ R + M K +P+V ++N L+ Y S F A+ LFR M++
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE 256
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
KG + NVV++NT+I + S + E+ + EM G + + T ++ + G++D
Sbjct: 257 KGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDD 316
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIM 501
A L L + V + Y +++ A ++ EL + P I T +
Sbjct: 317 ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVE 376
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
L ++ R E+A+ + AG + D F ++ + T+ + GY P
Sbjct: 377 GLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEP 436
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD 598
D ++++ F K ++ + L +++ D+ + PD
Sbjct: 437 DETTYHVLVSGFTKEGRRKEGEVLVNEMLDKD-MLPD 472
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 186/467 (39%), Gaps = 51/467 (10%)
Query: 116 FMVSLLSR-ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMR 174
+V +LSR DW+ A W ++ Y SV Y+ ++ + + +++ A L DEMR
Sbjct: 129 LVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR 188
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG--D 232
+ +P TL+ K+ + +V + + ++G D
Sbjct: 189 K--FSPSLVNSQTLLIMIRKYCAVH------------DVGKAINTFHAYKRFKLEMGIDD 234
Query: 233 YSKAISIFARLKASSIAPDLI----------------AYNSMINVFGKAKLFREARLLLQ 276
+ +S R K S A LI N NV G REA +
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP---REAERVWM 291
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
EM + GV D VSYS++++ Y + L +F M D N ++ +
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 337 MVEEGDRLFWSM-RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
V E L +M + GIEPNVV+YN+L++ ++ EA +F M +KG+ + TY
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
+ + I E+ L+ +M+ G +P TY +I + D +L+ +++
Sbjct: 412 HAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETA---IMVLARARRVEEA 512
V D Y MI G + A E+K P E I ++ E
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQ 528
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
R + GEVN G ++ R K + EV + +RE GY
Sbjct: 529 ----RITDSKGEVNK----GAIVKKSEREKNFLQQPEVRKVVREHGY 567
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 163/382 (42%), Gaps = 50/382 (13%)
Query: 226 LSRKLGDYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
LSR D+ A + F K + Y+SMI++ GK + F A L+ EMR
Sbjct: 134 LSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FS 191
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P V+ TLL IMI Y +H V +
Sbjct: 192 PSLVNSQTLL--------------------------------IMIRKYCAVHDVGKAINT 219
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK---GVQQNVVTYNTMINI 401
F + ++ +E + + +LL + +A HL + K + + N N+
Sbjct: 220 FHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNV 279
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
G E E+ + EM N G++ + ++YS++IS + K G L++ LF +++ ++ D
Sbjct: 280 IGSPREAER---VWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVF 516
+ +Y ++ A +A V+ A+ L+ ++ P+ + + I L +AR+ EEA VF
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
+ G I + + + ++ V E+ KMR++G P +++ +
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRILRTGEE---VFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 577 REFEKADALYSQIHDEGCVFPD 598
R+F+ L+ ++ E V PD
Sbjct: 454 RDFDNVLLLWDEMK-EKTVGPD 474
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK---A 440
+++G ++V Y++MI+I GK + + A LI EM+ P+ + T++ + K
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAV 210
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-------RPDN 493
+ +A F + +++ +Q+++ A R V+ A L+ K + N
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
I V+ R EA V+ + G +D+ + MI+ YS+ V+++F++
Sbjct: 271 IVLNGWCNVIGSPR---EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML--SLYGAR 611
M++ PD V V++A K +A L + +E + P+ V + L L AR
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 612 K 612
K
Sbjct: 388 K 388
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 170/383 (44%), Gaps = 13/383 (3%)
Query: 223 LIELSRKLGDYSKAISIFARLKASSIAP------DLIAYNSMINVFGKAKLFREA-RLLL 275
L L R+ D S A+ +F S P L+ Y+ +I G +K+F E ++LL
Sbjct: 12 LASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQL 335
D + P + + ++ + + AL +F EM +C + + N ++ +
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
+E+ S+ + G +P+ +YN L+ +S F +A+ LF M KK V+ VT+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 396 NTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
T+I+ K ++A + +M + G++P Y+++I + G+L A L +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVE 510
+++D +Y T+I + +AG +L E+ +PD + I E
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVL 570
A V + G D+ + ++ ++ R KK+ +FE M G PD+ +V
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 571 NAFGKLREFEKADALYSQIHDEG 593
+ + +FE+A + ++ +G
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKG 393
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 157/347 (45%), Gaps = 47/347 (13%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLL-DSSLF 203
P YN+++ ++ + A LFDEM ++ + P T+ TLI HGL DS +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI-----HGLCKDSRVK 204
Query: 204 WLQQMEQD-----NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
+M+ D V + +Y++LI+ ++G+ S A + I D Y+++
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I+ KA E ++L+EM + G PDTV+Y+ L ++ F ND+
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVL-------------INGFCVENDS-- 309
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
E +R+ M + G++P+V+SYN +L V+ + + EA +
Sbjct: 310 --------------------ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATY 349
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
LF M ++G + ++Y + + + L+ E+A ++ EM G +P +
Sbjct: 350 LFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
++GKL+ + + L G+ D ++ MI + +++ + LL
Sbjct: 410 ESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 158/331 (47%), Gaps = 4/331 (1%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++A+ + + + +K + V N +L ++ RAK A LFD++++R P+ TY+
Sbjct: 246 KKAVGIFELM-KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 188 LITHFGK-HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
L+ + + L++++ W M + D+V ++ ++E + S AI +F +K+
Sbjct: 304 LLNGWCRVRNLIEAARIW-NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 362
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
P++ +Y MI F K A +M D+G+ PD Y+ L+ + ++
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ EM + P D T N +I + M E G R++ M + IEP++ ++N +++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
Y + + ++ M KKG+ + +Y +I + +A ++EM + G++
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
I Y+ + + + G+ + L Q+ + SG
Sbjct: 543 LIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 9/331 (2%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
YNSM+++ K + F +L+EM G+ + A ER +A+ +F M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER-KKAVGIFELMK 256
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
K + + T N ++D G+ + +E LF +++ PN+++Y LL +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLI 315
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
EA ++ M G++ ++V +N M+ +S++ A L M++ G PN +Y+ +I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR---- 490
+ K ++ A F + SG+Q D +Y +I + + LL E++
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
PD I ++A + E T ++ + I F ++ Y + Y V
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 551 FEKMREVGYFPDSNVIALVLNAF---GKLRE 578
+++M + G PD N +++ GK RE
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR--KLGD 232
++G A TY+++++ K ++ + L++M G L + + I + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM---GTKGLLTMETFTIAMKAFAAAKE 244
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
KA+ IF +K + N +++ G+AKL +EA++L ++++ P+ ++Y+
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD--RLFWSMRK 350
LL + +EA ++++M D D+ N+M++ G L +++ D +LF M+
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE--GLLRSMKKSDAIKLFHVMKS 361
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G PNV SY ++R + + AI F M G+Q + Y +I +G + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
L++EMQ G P+ TY+ +I + + ++ K+ + ++ + ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
+Y A + + E+ + P + + VL R
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 161/360 (44%), Gaps = 3/360 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+S+L++ ++ +++L+ + K L + F + ++ AK+ A G+F+ M++
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETF--TIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
T + L+ G+ L + ++ ++ + +++ Y+ L+ ++ + +A
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I+ + + PD++A+N M+ ++ +A L M+ G CP+ SY+ ++
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ A+ F +M D+ D +I +G ++ L M++ G P+
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+YN L+++ ++ ++ M + ++ ++ T+N ++ Y + +E +
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 497
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM GI P+ +Y+ +I GK A +++ G++ + Y + R G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 162/362 (44%), Gaps = 8/362 (2%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A W E+ ++ + YN ++ + + +Q+ + +EM +GL T++ +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAM 236
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE-LSR-KLGDYSKAISIFARLKASS 247
F ++ + M++ + + L++ L R KLG +A +F +LK
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG--KEAQVLFDKLK-ER 293
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
P+++ Y ++N + + + EA + +M D+G+ PD V+++ +L + + + +A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 308 SVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+F M + CP ++ + IMI + + +E F M G++P+ Y L+
Sbjct: 354 KLFHVMKSKGPCP-NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+G + L + MQ+KG + TYN +I + E T + +M N I+P+
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
T++ I+ + A + ++ ++ G+ D Y +I G A R L
Sbjct: 473 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 532
Query: 487 EL 488
E+
Sbjct: 533 EM 534
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
++ ++ + ++ +A+ +F LM+K + V T N +++ G++ ++A L ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
+ PN +TY+ +++ W + L AA ++ + G++ D V + M+ R+
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 479 AHAKRLLHELKRPDNIP--RETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
+ A +L H +K P R IM+ + +E A F +G D +V+ C+
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
I + KK V E+ ++M+E G+ PD ++ + E +Y+++
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/280 (18%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 320 LDLTTCNIMIDVYGQL-HMVEEGDRLF-WSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
LDL+ +++++V + H + R F W+ + G +YN+++ + ++ F +
Sbjct: 157 LDLSH-DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMV 215
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ M KG+ + T+ + + + E +KA + + M+ + T + ++
Sbjct: 216 SVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL 274
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDN 493
+A A +LF KL+ + + Y ++ + R + A R+ +++ +PD
Sbjct: 275 GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDI 333
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ + L R+ + +A +F + G ++ + MI + + +E F+
Sbjct: 334 VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
M + G PD+ V ++ FG ++ + L ++ ++G
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 158/331 (47%), Gaps = 4/331 (1%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++A+ + + + +K + V N +L ++ RAK A LFD++++R P+ TY+
Sbjct: 245 KKAVGIFELM-KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 302
Query: 188 LITHFGK-HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
L+ + + L++++ W M + D+V ++ ++E + S AI +F +K+
Sbjct: 303 LLNGWCRVRNLIEAARIW-NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 361
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
P++ +Y MI F K A +M D+G+ PD Y+ L+ + ++
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ EM + P D T N +I + M E G R++ M + IEP++ ++N +++
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
Y + + ++ M KKG+ + +Y +I + +A ++EM + G++
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
I Y+ + + + G+ + L Q+ + SG
Sbjct: 542 LIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 10/336 (2%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR--KLGD 232
++G A D TY+++++ K ++ + L++M G L + + I + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM---GTKGLLTMETFTIAMKAFAAAKE 243
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
KA+ IF +K + N +++ G+AKL +EA++L ++++ P+ ++Y+
Sbjct: 244 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 302
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD--RLFWSMRK 350
LL + +EA ++++M D D+ N+M++ G L +++ D +LF M+
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE--GLLRSMKKSDAIKLFHVMKS 360
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G PNV SY ++R + + AI F M G+Q + Y +I +G + +
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
L++EMQ G P+ TY+ +I + + ++ K+ + ++ + ++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
+Y A + + E+ + P + + VL R
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 9/339 (2%)
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
A D YNSM+++ K + F +L+EM G+ + A ER +A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER-KKA 247
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ +F M K + + T N ++D G+ + +E LF +++ PN+++Y LL
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNG 306
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ EA ++ M G++ ++V +N M+ +S++ A L M++ G PN
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
+Y+ +I + K ++ A F + SG+Q D +Y +I + + LL
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 487 ELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
E++ PD I ++A + E T ++ + I F ++ Y +
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAF---GKLRE 578
Y V+++M + G PD N +++ GK RE
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 161/360 (44%), Gaps = 3/360 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+S+L++ ++ +++L+ + K L + F + ++ AK+ A G+F+ M++
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLLTMETF--TIAMKAFAAAKERKKAVGIFELMKKY 257
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
T + L+ G+ L + ++ ++ + +++ Y+ L+ ++ + +A
Sbjct: 258 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I+ + + PD++A+N M+ ++ +A L M+ G CP+ SY+ ++
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ A+ F +M D+ D +I +G ++ L M++ G P+
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+YN L+++ ++ ++ M + ++ ++ T+N ++ Y + +E +
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 496
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM GI P+ +Y+ +I GK A +++ G++ + Y + R G
Sbjct: 497 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 161/362 (44%), Gaps = 8/362 (2%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A W E+ ++ YN ++ + + +Q+ + +EM +GL T++ +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAM 235
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE-LSR-KLGDYSKAISIFARLKASS 247
F ++ + M++ + + L++ L R KLG +A +F +LK
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG--KEAQVLFDKLK-ER 292
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
P+++ Y ++N + + + EA + +M D+G+ PD V+++ +L + + + +A+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 308 SVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+F M + CP ++ + IMI + + +E F M G++P+ Y L+
Sbjct: 353 KLFHVMKSKGPCP-NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+G + L + MQ+KG + TYN +I + E T + +M N I+P+
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
T++ I+ + A + ++ ++ G+ D Y +I G A R L
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 531
Query: 487 EL 488
E+
Sbjct: 532 EM 533
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
++ ++ + ++ +A+ +F LM+K + V T N +++ G++ ++A L ++
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 419 QNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLV 478
+ PN +TY+ +++ W + L AA ++ + G++ D V + M+ R+
Sbjct: 290 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 479 AHAKRLLHELKRPDNIP--RETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
+ A +L H +K P R IM+ + +E A F +G D +V+ C+
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
I + KK V E+ ++M+E G+ PD ++ + E +Y+++
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/280 (18%), Positives = 124/280 (44%), Gaps = 9/280 (3%)
Query: 320 LDLTTCNIMIDVYGQL-HMVEEGDRLF-WSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
LDL+ +++++V + H + R F W+ + G + +YN+++ + ++ F +
Sbjct: 156 LDLSH-DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 214
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ M KG+ + T+ + + + E +KA + + M+ + T + ++
Sbjct: 215 SVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL 273
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDN 493
+A A +LF KL+ + + Y ++ + R + A R+ +++ +PD
Sbjct: 274 GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDI 332
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ + L R+ + +A +F + G ++ + MI + + +E F+
Sbjct: 333 VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 392
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
M + G PD+ V ++ FG ++ + L ++ ++G
Sbjct: 393 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++A+ + + + +K + V N +L ++ RAK A LFD++++R P+ TY+
Sbjct: 246 KKAVGIFELM-KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 188 LITHFGK-HGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
L+ + + L++++ W ++Q + D+V ++ ++E + S AI +F +K+
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
P++ +Y MI F K A +M D+G+ PD Y+ L+ + ++
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ EM + P D T N +I + M E R++ M + IEP++ ++N +++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI-NIYGKSLEHEKATNLIQEMQNNGIQP 425
Y + + ++ M KKG+ + +Y +I + G+ E A ++EM + G++
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE-ACRYLEEMLDKGMKT 541
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
I Y+ + + + G+ + L Q+ + SG
Sbjct: 542 PLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 9/339 (2%)
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
A D YNSM+++ K + F +L+EM G+ + A ER +A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER-KKA 248
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ +F M K + + T N ++D G+ + +E LF +++ PN+++Y LL
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNG 307
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ EA ++ M +G++ ++V +N M+ +S + A L M++ G PN
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
+Y+ +I + K ++ A F + SG+Q D +Y +I + + LL
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 487 ELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNK 542
E++ PD I ++A + E AT ++ + I F ++ Y +
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 543 KYTNVVEVFEKMREVGYFPDSNVIALVLNAF---GKLRE 578
Y V+E+M + G PD N +++ GK RE
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 156/336 (46%), Gaps = 10/336 (2%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR--KLGD 232
++G A D TY+++++ K ++ + L++M G L + + I + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM---GTKGLLTMETFTIAMKAFAAAKE 244
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
KA+ IF +K + N +++ G+AKL +EA++L ++++ P+ ++Y+
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD--RLFWSMRK 350
LL + +EA ++++M D D+ N+M++ G L ++ D +LF M+
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLE--GLLRSRKKSDAIKLFHVMKS 361
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G PNV SY ++R + + AI F M G+Q + Y +I +G + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
L++EMQ G P+ TY+ +I + + A ++ K+ + ++ + ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
+Y A + + E+ + P + + VL R
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 164/360 (45%), Gaps = 3/360 (0%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M+S+L++ ++ +++L+ + K L + F + ++ AK+ A G+F+ M++
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETF--TIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
T + L+ G+ L + ++ ++ + +++ Y+ L+ ++ + +A
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I+ + + PD++A+N M+ +++ +A L M+ G CP+ SY+ ++
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ A+ F +M D+ D +I +G ++ L M++ G P+
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+YN L+++ ++ A ++ M + ++ ++ T+N ++ Y + +E + +
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWE 497
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
EM GI P+ +Y+ +I GK A +++ G++ + Y + R G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 162/362 (44%), Gaps = 8/362 (2%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A W E+ ++ YN ++ + + +Q+ + +EM +GL T++ +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAM 236
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE-LSR-KLGDYSKAISIFARLKASS 247
F ++ + M++ + + L++ L R KLG +A +F +LK
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG--KEAQVLFDKLK-ER 293
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
P+++ Y ++N + + + EA + +M D G+ PD V+++ +L + + + +A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 308 SVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+F M + CP ++ + IMI + + +E F M G++P+ Y L+
Sbjct: 354 KLFHVMKSKGPCP-NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+G + L + MQ+KG + TYN +I + E AT + +M N I+P+
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
T++ I+ + A + +++++ G+ D Y +I G A R L
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Query: 487 EL 488
E+
Sbjct: 533 EM 534
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 125/280 (44%), Gaps = 9/280 (3%)
Query: 320 LDLTTCNIMIDVYGQL-HMVEEGDRLF-WSMRKMGIEPNVVSYNTLLRVYGESELFGEAI 377
LDL+ +++++V + H + R F W+ + G + +YN+++ + ++ F +
Sbjct: 157 LDLSH-DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 215
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ M KG+ + T+ + + + E +KA + + M+ + T + ++
Sbjct: 216 SVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL 274
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDN 493
+A A +LF KL+ + + Y ++ + R + A R+ +++ +PD
Sbjct: 275 GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDI 333
Query: 494 IPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEK 553
+ + L R+R+ +A +F + G ++ + MI + + +E F+
Sbjct: 334 VAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
M + G PD+ V ++ FG ++ + L ++ ++G
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 145 PSVFAYNVVLRNVLRAKQ-WHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
PS + N +L ++R +Q L + + + G+ + T+ LI + G +D +
Sbjct: 141 PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATE 200
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYS--KAISIFARLKASSIAPDLIAYNSMINV 261
++ M QD+V D LYS L+ K D S I L+ + +P L Y ++
Sbjct: 201 LVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRF 260
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD 321
+ +E +L +M+ + V PD V Y+ +L + +E + +A +F E+ D
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 322 LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFR 381
+ T N+ I+ + + +E ++ SM K+G EPNVV+YN L++ ++ A L++
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
M+ GV +N T++ MI+ Y + E A L++E N + + +IS + G
Sbjct: 381 EMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKG 440
Query: 442 KLDRAAMLFQKL 453
+D+A L L
Sbjct: 441 LMDQAVELLAHL 452
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 152/338 (44%), Gaps = 20/338 (5%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A W + + + Y+++++ ++ L DEM + G T++ LI
Sbjct: 135 AYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI 194
Query: 190 THFGKHGL--------LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA 241
G+ GL + S F + + S + +L+S L KL D+ ++
Sbjct: 195 CTCGEAGLARDVVEQFIKSKTFNYRPYKH---SYNAILHSLLGVKQYKLIDW-----VYE 246
Query: 242 RLKASSIAPDLIAYNSMINVFGKAKLFREARL--LLQEMRDNGVCPDTVSYSTLLAIYVD 299
++ PD++ YN I +F +L + RL LL EM +G PD +Y+ LL
Sbjct: 247 QMLEDGFTPDVLTYN--IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
+ + AL++ + M + + +ID + +E K+G P+VV
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y ++ Y +A +F+ M +KG NV TYN+MI + + + ++A L++EM+
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+ G PN + YST+++ + AGK+ A + + + G
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL---MQKKGVQQNVVTYNTM 398
D ++ M + G P+V++YN ++ + L G+ L+RL M K G ++ TYN +
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVM--FANFRL-GKTDRLYRLLDEMVKDGFSPDLYTYNIL 298
Query: 399 INIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGV 458
++ + A NL+ M+ G++P I ++T+I +AGKL+ + G
Sbjct: 299 LHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC 358
Query: 459 QIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEATW 514
D V Y MI Y G + A+ + E+ +P + I A + +EA
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 515 VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+ ++ + G + V+ ++N K EV + M E G++
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 49/343 (14%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEM-RQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
P V + VL + + A GLF M R +GL PD T+ T++T G
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN--------- 277
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
L++++Q I +L + I +++ +S+++++G
Sbjct: 278 -LRRLKQGK-------------------------EIHGKLITNGIGSNVVVESSLLDMYG 311
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K REAR + M ++VS+S LL Y N +A+ +F EM + DL
Sbjct: 312 KCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLY 363
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
++ L V G + + G NV+ + L+ +YG+S A ++ M
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ N++T+N M++ ++ E+A + +M GI+P+ I++ I++ G +
Sbjct: 424 SIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 444 DRAAMLFQKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
D F + +S G++ Y MI RAGL A+ LL
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 179/408 (43%), Gaps = 14/408 (3%)
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
T + I K G L ++ L + LY++L++ K+ + I A +
Sbjct: 28 TKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV 87
Query: 244 KASSIAPDLIAYNSMINVFGK-AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
S + D NS+++++ K RE R + D D +S++++++ YV +
Sbjct: 88 VKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF----DGRFVKDAISWTSMMSGYVTGKE 143
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
V+AL VF EM + T + + +L V G + G E N +T
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISST 203
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNN 421
L +YG + +A +F M + +V+ + +++ + K+ +E+A L M +
Sbjct: 204 LAYLYGVNREPVDARRVFDEMP----EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
G+ P+ T+ T+++ +L + + KL ++G+ + V+ +++ Y + G V A
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 482 KRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRN 541
+++ + + + +++ + + E+A +FR+ E D+ FG ++ +
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGL 375
Query: 542 KKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
E+ + G F + V + +++ +GK + A +YS++
Sbjct: 376 AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 19/269 (7%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
++A+ + + EK LY + VL+ L + + +RG + S
Sbjct: 348 EKAIEIFREMEEKDLY-----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
LI +GK G +DS+ +M N ++ ++ ++ + G +A+S F +
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRN----MITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEM-RDNGVCPDTVSYSTLLAIYVDNERFVEA 306
I PD I++ +++ G + E R M + G+ P T YS ++ + F EA
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF--WSMRKMGIEPNV-VSYNTL 363
++ + A+C D + +++ G + R+ + R M +EP +SY L
Sbjct: 519 ENL---LERAECRNDASLWGVLL---GPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 364 LRVYGESELFGEAIHLFRLMQKKGVQQNV 392
+Y G+A+++ +LM ++GV + V
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 121/316 (38%), Gaps = 53/316 (16%)
Query: 302 RFVEALSVFSEMNDAKCPLD-------LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+ EA+ + + + ++ P L TCN V+ +H G + + K G+E
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCN---KVFSFIH----GIQFHAHVVKSGLE 93
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
+ N+LL +Y + G + R + ++ +++ +M++ Y EH KA +
Sbjct: 94 TDRNVGNSLLSLYFK---LGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
EM + G+ N T S+ + + G++ + + G + + + T+ Y
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGV 210
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
A+R+ E+ PD I W +
Sbjct: 211 NREPVDARRVFDEMPEPDVI------------------CWT-----------------AV 235
Query: 535 INLYSRNKKYTNVVEVFEKM-REVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
++ +S+N Y + +F M R G PD + VL A G LR ++ ++ ++ G
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 594 CVFPDEVHFQMLSLYG 609
V +L +YG
Sbjct: 296 IGSNVVVESSLLDMYG 311
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 186/400 (46%), Gaps = 18/400 (4%)
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
GL + ++LI + ++G L+ S M+ N+S +++++ KLG A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS----WNSILSSYTKLGYVDDA 174
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I + ++ + PD++ +NS+++ + L ++A +L+ M+ G+ P T S S+LL
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
+ ++ + + D+ +ID+Y + + +F M N
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF----DMMDAKN 290
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+V++N+L+ + L +A L M+K+G++ + +T+N++ + Y + EKA ++I
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
+M+ G+ PN ++++ I S K G A +F K++ GV + T++
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Query: 477 LVAHAKRLLHELKRPDNIPRE----TAIM-VLARARRVEEATWVFRQAFAAGEVNDISVF 531
L+ H+ + +H N+ + TA++ + ++ ++ A + F + ++ +
Sbjct: 411 LL-HSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI----EIFWGIKNKSLASW 465
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLN 571
CM+ Y+ + + F M E G PD+ VL+
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 191/437 (43%), Gaps = 54/437 (12%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+ ++ A+N ++ + A A L M + G+ PD T+++L + + G + +L
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ +M++ V+ ++V ++ + K G++ A+ +F +++ + P+ ++++ + G
Sbjct: 348 VIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG 407
Query: 264 KAKLFREARLLLQ-EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
L + + +R N +C D + L+ +Y + A+ +F + + L
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLIC-DAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SL 462
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+ N M+ Y EEG F M + G+EP+ +++ ++L V S L E F L
Sbjct: 463 ASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDL 522
Query: 383 MQKK-GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
M+ + G+ + + M+++ G+S ++A + IQ M ++P+A + +S +
Sbjct: 523 MRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSSCKIHR 579
Query: 442 KLDRAAMLFQKLRSSGVQIDQVL-------YQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
L+ A + +++L QVL Y MI Y L R +++
Sbjct: 580 DLELAEIAWKRL--------QVLEPHNSANYMMMINLYS-------------NLNRWEDV 618
Query: 495 PRETAIMVLARARRVEEATWV-----FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVE 549
R +M R R + +W+ +A G+ + Y + +
Sbjct: 619 ERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP-----------DEGDIYFELYK 667
Query: 550 VFEKMREVGYFPDSNVI 566
+ +M++ GY PD++ I
Sbjct: 668 LVSEMKKSGYVPDTSCI 684
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 187/414 (45%), Gaps = 20/414 (4%)
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS----MINVFGKAKLFREA 271
D + ++ ++ ++ + G++ KA+ +F ++ S AY+S ++ V + F E
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAK----AYDSTMVKLLQVCSNKEGFAEG 108
Query: 272 RLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDV 331
R + + G+ + ++L+ +Y N + + VF+ M D +L++ N ++
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSS 164
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
Y +L V++ L M G++P++V++N+LL Y L +AI + + MQ G++ +
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 392 VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ 451
+ ++++ + + + + N + + +T+I ++ K G L A M+F
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 452 KLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARAR 507
+ + + V + +++ A L+ A+ L+ +++ PD I + A
Sbjct: 285 MMDAKNI----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
+ E+A V + G ++ + + + S+N + N ++VF KM+E G P++ ++
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 568 LVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLF 621
+L G L ++ + + V ++ +YG D +F
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 194/448 (43%), Gaps = 19/448 (4%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P F +N+++R + + + L+ M + YT+ +L+ + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
Q+ + D+ ++LI G++ A +F R+ PD +++NS+I + K
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVK 193
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
A A L ++M + + +S++T+++ YV + EAL +F EM ++ D +
Sbjct: 194 AGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
+ QL +E+G + + K I + V L+ +Y + EA+ +F+ ++
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
KK VQ + +I+ Y +A + EMQ GI+PN IT++ +++ G ++
Sbjct: 310 KKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 445 RAAMLFQKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
++F + R ++ Y ++ RAGL+ AKR + E+ N A++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY--FP 561
R + E + A + + N+++ +KK+ E M+E G P
Sbjct: 426 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQI 589
+ I+L G EF D + +I
Sbjct: 486 GCSTISLE----GTTHEFLAGDRSHPEI 509
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 136/316 (43%), Gaps = 37/316 (11%)
Query: 86 ELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLL-------SRETDWQR--------- 129
++ A I+ E +++AV SL N ++ F ++ L + W
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 130 ----ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY 185
AL L + EK + ++ ++ ++A A LF EM+ + PD +
Sbjct: 196 KMDIALTLFRKMAEK-----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 186 STLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKA 245
+ ++ + G L+ + + + + D VL LI++ K G+ +A+ +F +K
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 246 SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVE 305
S+ A+ ++I+ + REA EM+ G+ P+ ++++ +L E
Sbjct: 311 KSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 306 ALSVFSEMN-DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+F M D + ++D+ G+ +++E R +++M ++PN V + LL
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF---IQEMPLKPNAVIWGALL 423
Query: 365 ---RVYGESELFGEAI 377
R++ EL GE I
Sbjct: 424 KACRIHKNIEL-GEEI 438
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 212/510 (41%), Gaps = 54/510 (10%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF---GKHGLLD 199
+ P+ A N+++ + + A +F+ +R R +++ ++HF G G L
Sbjct: 139 FVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLV 194
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
L++M + + + ++ L + G S+A + + S I+ + ++ ++
Sbjct: 195 GVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLV 254
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
+ F ++ ++A L +M G P+ V+Y++L+ +VD EA +V S++
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D+ CN+MI Y +L EE ++F S+ K + P+ ++ ++L S G+ +
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLS---GKFDLV 371
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
R+ G ++VT N + N + K + A ++ M + TY+ +S +
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIP 495
G A +++ + +D + +I + G A KR + E D +
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS 491
Query: 496 RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
AI L RA+R+EEA Y+ + M+
Sbjct: 492 YTVAIKGLVRAKRIEEA-------------------------------YSLCCD----MK 516
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGA-RKDF 614
E G +P+ +++ K +E EK + + EG FQ+ SL R DF
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDF 576
Query: 615 TMVESLFEKLDS----NPNINKKELHLVVS 640
+ S+FEK S N +++ + L VS
Sbjct: 577 SEFRSVFEKWKSEFTENVDVSDSDDELFVS 606
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 36/263 (13%)
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
Y KAI ++ + + P+ A N M++V K + A + + +R
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR------------- 170
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+ + F ALS F DL I++ M+ E G
Sbjct: 171 ----FRNFFSFDIALSHFCSRGGRG---DLVGVKIVLK-----RMIGE-----------G 207
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
PN + +LR+ + EA + LM G+ +V ++ +++ + +S E +KA
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+L +M G PN +TY+++I + G +D A + K++S G+ D VL MI Y
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Query: 473 ERAGLVAHAKRLLHELKRPDNIP 495
R G A+++ L++ +P
Sbjct: 328 TRLGRFEEARKVFTSLEKRKLVP 350
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 200/457 (43%), Gaps = 60/457 (13%)
Query: 87 LLASISSTQNE-QELHAVM---SLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKAL 142
L+ + ST E +++HA + L + + R + + +D A + IN K
Sbjct: 30 LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK-- 87
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM--RQRGLAPDRYTYSTLITHFGKHGLLDS 200
+ F +N ++R R+ +A +F +M + P R TY ++ +G+ G
Sbjct: 88 ---NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD 144
Query: 201 SLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMIN 260
+ ++ + D + + ++ + G +A IF + I D++A+NSMI
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIM 200
Query: 261 VFGKAKLFREARLLLQEM-RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP 319
F K L +A+ L EM + NGV S++++++ +V N RF +AL +F EM +
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
D T +++ L E+G + + + E N + L+ +Y + E +++
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
F KK + +N+MI + E+A +L E++ +G++P+++++ +++
Sbjct: 316 FECAPKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 440 AGKLDRAAMLFQKLRSS---------------------------------GVQIDQVLYQ 466
+G++ RA F+ ++ V+ D V++
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+++ A + G V AKR LK+ D P ET VL
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCLKKLD--PDETCGYVL 466
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 18/288 (6%)
Query: 236 AISIFARLKASS--IAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
AISIF + SS + P + Y S+ +G+ R+ R L + G+ D+ +T+
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
L +YV +EA +F M D+ N MI + + ++++ LF M +
Sbjct: 168 LHMYVTCGCLIEAWRIFLGMIG----FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR-- 221
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
N VS+N+++ + + F +A+ +FR MQ+K V+ + T +++N E+
Sbjct: 222 --NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
+ + + N + N+I + +I ++ K G ++ +F+ + + +MI+
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC----WNSMILGLA 335
Query: 474 RAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFR 517
G A L EL+R PD++ + A + V A FR
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 306 ALSVFSEM---NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
A+S+F +M + + P LT ++ YG+L +G +L + K G+E + NT
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSV-FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNT 166
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
+L +Y EA +F M + +VV +N+MI + K ++A NL EM
Sbjct: 167 MLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP--- 219
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAK 482
Q N ++++++IS + + G+ A +F++++ V+ D +++ A G +
Sbjct: 220 -QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG-ASEQG 277
Query: 483 RLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
R +HE ++I I + + +EE VF A +S + MI
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA----PKKQLSCWNSMILG 333
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
+ N +++F ++ G PDS VL A E +AD + + ++ + P
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 598 DEVHFQ-MLSLYGARKDFTMVESLFEKL 624
H+ M+++ G E+L + +
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEM--QNNGIQPNAITYSTIISIWEKAGKLDRA 446
+N +NT+I + +S E A ++ +M + ++P +TY ++ + + G+
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
L + G++ D + TM+ Y G + A R+ + D + + IM A+
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
+++A +F + + N +S + MI+ + RN ++ + +++F +M+E PD +
Sbjct: 206 GLIDQAQNLFDEM---PQRNGVS-WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 567 ALVLNAFGKLREFEKADALYSQI 589
+LNA L E+ ++ I
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYI 284
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 158/368 (42%), Gaps = 35/368 (9%)
Query: 125 TDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYT 184
+DW+ A L + +++++ S YN +L + + +++ H +FDEM +R + T
Sbjct: 121 SDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKT 180
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
Y L+ + +D ++ ++ ++ + DLV + L+ + A ++F +
Sbjct: 181 YEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-R 239
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
D+ A N ++N + EA+ +++ + PD VSY T++ +
Sbjct: 240 RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLG 299
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
+A+ ++ M D + D+ CN +ID + E +F + + G +PNVV+YN+LL
Sbjct: 300 KAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLL 359
Query: 365 R-------------VYGESELFGEAIH---------------------LFRLMQKKGVQQ 390
+ + E EL G + + M K +
Sbjct: 360 KHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEM 419
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
YN M +Y + + EK + EM+ +G+ P+ TY+ I GK+ A F
Sbjct: 420 TSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYF 479
Query: 451 QKLRSSGV 458
Q++ S G+
Sbjct: 480 QEMMSKGM 487
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 16/315 (5%)
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
YN +L V G+ F E +F M K+ N TY ++N Y + + ++A + + +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLF-QKLRSSGVQIDQVLYQTMIVAYERAGLV 478
GI + + + ++ + ++ A LF + R G I + ++ + G V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGNV 263
Query: 479 AHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
AKR ++ RPD + T I L + ++ +A ++R + D+ + +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL--VLNAFGKLREFEKADALYSQIH-D 591
I+ K+ +EVF ++ E G PD NV+ +L K+R EK L ++
Sbjct: 324 IDALCFKKRIPEALEVFREISEKG--PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 592 EGCVFPDEVHFQMLSLYGAR-KDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLN 650
G P++V F L Y R KD V+ + E++ N +L+ ++ +Y + D+
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKD---VDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 438
Query: 651 DASRIMNRMNHKAIG 665
I + M +G
Sbjct: 439 KVREIWSEMERSGLG 453
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 138/345 (40%), Gaps = 6/345 (1%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
YN +++V GK + F E + EM + +Y LL Y + EA+ VF
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK-MGIEPNVVSYNTLLRVYGESELF 373
+ DL + ++ + VE + LF S R+ G ++ + N +L +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNV 263
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
EA ++ + + +VV+Y TMIN K + KA L + M + P+ + +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE--LKRP 491
I ++ A +F+++ G + V Y +++ + L+ E LK
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS-VFGCMINLYSRNKKYTNVVEV 550
P + L + + + + + A + S ++ M LY + K V E+
Sbjct: 384 SCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCV 595
+ +M G PD + ++ + +A + + ++ +G V
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 189/425 (44%), Gaps = 24/425 (5%)
Query: 211 DNVSGDLVLYSNLI--ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
D V + L+ N++ EL+ K GD+S +I +F ++ +S + D ++ + F +
Sbjct: 153 DEVKIEKALFWNILMNELA-KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
L + +G ++L+A Y+ N+R A VF EM + D+ + N +
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSI 267
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL--FGEAIHLFRLMQKK 386
I+ Y + E+G +F M GIE ++ + ++ +S L G A+H + K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH--SIGVKA 325
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
+ NT++++Y K + + A + +EM + + ++Y+++I+ + + G A
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEA 381
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD---NIPRETAIM-V 502
LF+++ G+ D ++ R L+ KR+ +K D +I A+M +
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF-P 561
A+ ++EA VF + V DI + +I YS+N + +F + E F P
Sbjct: 442 YAKCGSMQEAELVFSEM----RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 562 DSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLF 621
D +A VL A L F+K ++ I G V ++ +Y + LF
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 622 EKLDS 626
+ + S
Sbjct: 558 DDIAS 562
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 219/506 (43%), Gaps = 69/506 (13%)
Query: 126 DWQRALALLDWIN-EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYT 184
D + A + D + EKAL+ +N+++ + ++ + + GLF +M G+ D YT
Sbjct: 144 DLKEASRVFDEVKIEKALF------WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 185 YSTLITHFGK----------HGLLDSSLFWLQQMEQDNVSGDLV---LYSNLIELSRKLG 231
+S + F HG + S F E+++V LV L + ++ +RK+
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFG----ERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
D D+I++NS+IN + L + + +M +G+ D +
Sbjct: 254 D-------------EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 292 TLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
++ A D+ +V S A + CN ++D+Y + ++ +F M
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-- 358
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
+ +VVSY +++ Y L GEA+ LF M+++G+ +V T ++N + ++
Sbjct: 359 --DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
+ + ++ N + + + ++ ++ K G + A ++F ++R D + + T+I
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGG 472
Query: 472 YERAGLVAHAK---RLLHELKR--PDN------IPRETAIMVLARARRVEEATWVFRQAF 520
Y + A LL E KR PD +P ++ + R + ++ R +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH--GYIMRNGY 530
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA-LVLNAFGKLREF 579
+D V ++++Y++ +F+ + + +IA ++ FGK
Sbjct: 531 ----FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK---- 582
Query: 580 EKADALYSQIHDEGCVFPDEVHFQML 605
+A AL++Q+ G + DE+ F L
Sbjct: 583 -EAIALFNQMRQAG-IEADEISFVSL 606
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 159/356 (44%), Gaps = 48/356 (13%)
Query: 115 RFMVSLL---SRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
RF +LL S+ D A A+ ++++ SV +Y ++ R A LF+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDR-----SVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
EM + G++PD YT + ++ ++ LLD + ++++++ D+ + + L+++ K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREA----RLLLQEMRDN------ 281
+A +F+ ++ D+I++N++I + K EA LLL+E R +
Sbjct: 447 SMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 282 -GVCPDTVSYSTL-----LAIYVDNERFVEALSVFSEMND--AKCPL------------- 320
V P S S + Y+ + V + + D AKC
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 321 -DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
DL + +MI YG +E LF MR+ GIE + +S+ +LL S L E
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 380 FRLMQKKG-VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
F +M+ + ++ V Y ++++ ++ + KA I+ M I P+A + ++
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP---IPPDATIWGALL 675
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 164/416 (39%), Gaps = 92/416 (22%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLY----- 220
A +FDEM +R D +++++I + +GL + L QM + DL
Sbjct: 249 ARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 221 ----SNLIELSR--------------------------KLGDYSKAISIFARLKASSIAP 250
S LI L R K GD A ++F + S+
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV-- 362
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVF 310
++Y SMI + + L EA L +EM + G+ PD + + +L E V
Sbjct: 363 --VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 311 SEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES 370
+ + D+ N ++D+Y + ++E + +F MR +++S+NT++ Y ++
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV----KDIISWNTIIGGYSKN 476
Query: 371 ELFGEAIHLFRLM------------------------------------QKKGVQQNVVT 394
EA+ LF L+ + G +
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
N+++++Y K A L + ++ + ++++ +I+ + G A LF ++R
Sbjct: 537 ANSLVDMYAKC----GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 455 SSGVQIDQVLYQTMIVAYERAGLVAHAKRLL----HELKRPDNIPRETAIM-VLAR 505
+G++ D++ + +++ A +GLV R HE K + I+ +LAR
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 170/403 (42%), Gaps = 28/403 (6%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
G+ A+ + I P + S++ + +K ++ + + +R NG D+
Sbjct: 75 GNLENAVKLLCVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG 132
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
S L +Y + EA VF E+ K NI+++ + LF M
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALF----WNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 351 MGIEPNVVSYNTLLRVYGE--SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
G+E + +++ + + + S GE +H F L K G + N+++ Y K+
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL--KSGFGERNSVGNSLVAFYLKNQRV 246
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
+ A + EM + + I++++II+ + G ++ +F ++ SG++ID ++
Sbjct: 247 DSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRE-----TAIMVLARARRVEEATWVFRQAFAAG 523
+ L++ R +H + RE T + + ++ ++ A VFR
Sbjct: 303 FAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR------ 355
Query: 524 EVNDISV--FGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
E++D SV + MI Y+R V++FE+M E G PD + VLN + R ++
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
++ I + F V ++ +Y E +F ++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 210/496 (42%), Gaps = 62/496 (12%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF-DEMR 174
F ++ LS + A + D I + P+ FA+N ++R L+ F D +
Sbjct: 69 FAMAALSSFASLEYARKVFDEIPK-----PNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 123
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQME----QDNVSGDLVLYSNLIELSRKL 230
+ P++YT+ LI K SSL Q + + V D+ + ++LI
Sbjct: 124 ESQCYPNKYTFPFLI----KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
GD A +F +K D++++NSMIN F + +A L ++M V V+
Sbjct: 180 GDLDSACKVFTTIKEK----DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+L+ V S + + + ++LT N M+D+Y + +E+ RLF +M
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME- 294
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
E + V++ T+L Y SE + A + M Q+++V +N +I+ Y ++ + +
Sbjct: 295 ---EKDNVTWTTMLDGYAISEDYEAAREVLNSMP----QKDIVAWNALISAYEQNGKPNE 347
Query: 411 ATNLIQEMQ-NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
A + E+Q ++ N IT + +S + G L+ + ++ G++++ + +I
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
Y + G +L++ R+ F + E D+
Sbjct: 408 HMYSKCG----------DLEKS-------------------------REVFNSVEKRDVF 432
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
V+ MI + + V++F KM+E P+ V A ++A++L+ Q+
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 590 HDEGCVFPDEVHFQML 605
+ P+E H+ +
Sbjct: 493 ESNYGIVPEEKHYACI 508
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 151/344 (43%), Gaps = 12/344 (3%)
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
P++ +++TL+ Y V ++ F +M ++++C + T +I ++ + G
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
L K + +V N+L+ Y A +F +++K +VV++N+MIN +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK----DVVSWNSMINGFV 208
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
+ +KA L ++M++ ++ + +T ++S K L+ + + + V ++
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
L M+ Y + G + AKRL ++ DN+ T + A + E A R+ +
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA----REVLNSM 324
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV--LNAFGKLREFEK 581
DI + +I+ Y +N K + VF ++ ++ N I LV L+A ++ E
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLD 625
++S I G V ++ +Y D +F ++
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 209/492 (42%), Gaps = 29/492 (5%)
Query: 106 LYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHL 165
L Q L+ + + LL + + L + I + +S +L N++
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY 61
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A +FDEM + P + ++TL + ++ L SL ++M V D Y +++
Sbjct: 62 ARQVFDEMHK----PRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
+LGD+S ++ A + I ++ ++ K A L + M+
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQ----VK 173
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D V+++ LA+ V AL F++M D T M+ GQL +E G+ ++
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
RK I+ N++ N L ++ + A LF M+ Q+NVV+++TMI Y +
Sbjct: 234 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK----QRNVVSWSTMIVGYAMN 289
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS---GVQIDQ 462
+ +A L MQN G++PN +T+ ++S AG ++ F + S ++ +
Sbjct: 290 GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRK 349
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRETAIMVLARARRVEEATWVFRQAFA 521
Y M+ R+GL+ A + ++ PD + A R + + Q A
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDM-----ILGQKVA 404
Query: 522 AGEVN---DISVFGCMI-NLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAF-GKL 576
V DI + ++ N+Y+ K+ V +V KMR++G V A F GK+
Sbjct: 405 DVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG---TKKVAAYSSVEFEGKI 461
Query: 577 REFEKADALYSQ 588
F + D + Q
Sbjct: 462 HFFNRGDKSHPQ 473
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 19/306 (6%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
F Y +++ AK W A + D+M+ G+ P+ +T+S+LI+ GL++ + ++
Sbjct: 375 FTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEE 434
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI-----APDLIAYN--SMIN 260
M + ++ L+ + Y +A +F K SS+ A D+++ S N
Sbjct: 435 MLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPN 494
Query: 261 VF---GKAKLFR--EARLLLQEMRDNGVCPDTVSYSTLL-AIYVDNERFVEALSVFSEMN 314
+ G L +Q + P T +Y+ LL A D R E + EM
Sbjct: 495 ILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE---LMDEMK 551
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+ T + +ID+ G VE R+ +M G P+VV+Y T +++ E++
Sbjct: 552 SLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLK 611
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINI---YGKSLEHEKATNLIQEMQNNGIQPNAITYS 431
A LF M++ ++ N VTYNT++ YG LE + + Q+M+N G +PN
Sbjct: 612 LAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLK 671
Query: 432 TIISIW 437
+I W
Sbjct: 672 ELIEEW 677
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 165/369 (44%), Gaps = 20/369 (5%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
+++++ + + P+ Y ++L+ + H L +L + M+ +V+ D+ Y+ L++
Sbjct: 289 IYEDLLKENIKPNIYVINSLM-NVNSHDL-GYTLKVYKNMQILDVTADMTSYNILLKTCC 346
Query: 229 KLGDYSKAISIFA---RLKASSIAP-DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
G A I+ R+++S + D Y ++I VF AK+++ A + +M+ GV
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
P+T ++S+L++ + +A +F EM + C + NI++ + + RL
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 345 FWSMRKMGIEPNV----------VSYNTLLRVYGESELFGEAIHLFRLMQKK--GVQQNV 392
F S + + ++ S +L+ G L + + K +
Sbjct: 467 FQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTT 526
Query: 393 VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
TYN ++ G ++ + L+ EM++ G+ PN IT+ST+I + +G ++ A + +
Sbjct: 527 ATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRT 584
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEA 512
+ S+G + D V Y T I + A L E++R P L +AR +
Sbjct: 585 MHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGS 644
Query: 513 TWVFRQAFA 521
RQ A
Sbjct: 645 LLEVRQCLA 653
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 180/434 (41%), Gaps = 62/434 (14%)
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
+L +I K GD ++ + K P++ +MI+V G + ++R + ++
Sbjct: 233 LLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYED 292
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
+ + P+ ++L+ V++ L V+ M D+T+ NI++
Sbjct: 293 LLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGR 350
Query: 338 VEEGDRLFWSMRKMG----IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
V+ ++ ++M ++ + +Y T+++V+ +++++ A+ + M+ GV N
Sbjct: 351 VDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTH 410
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
T++++I+ + E+A +L +EM +G +PN+ ++ ++ +A + DRA LFQ
Sbjct: 411 TWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSW 470
Query: 454 RSSGVQIDQVLYQTMIVAYER------------AGLVAH--------------------- 480
+ S V ++ LY IV+ R LV
Sbjct: 471 KGSSV--NESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTAT 528
Query: 481 --------------AKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
K L+ E+K P+ I T I + + VE A + R +A
Sbjct: 529 YNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSA 588
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD---SNVIALVLNAFGKLREF 579
G D+ + I + + NK +FE+MR P+ N + + +G L E
Sbjct: 589 GTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEV 648
Query: 580 EKADALYSQIHDEG 593
+ A+Y + + G
Sbjct: 649 RQCLAIYQDMRNAG 662
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 138 NEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGL 197
+++ + P+ YN++L+ ++ L DEM+ GL+P++ T+STLI G G
Sbjct: 517 SKRFCFKPTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 198 LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
++ ++ L+ M D+V Y+ I++ + A S+F ++ I P+ + YN+
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT 634
Query: 258 MINVFGKAKLFREARLLL---QEMRDNGVCPD 286
++ K E R L Q+MR+ G P+
Sbjct: 635 LLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 129/631 (20%), Positives = 250/631 (39%), Gaps = 133/631 (21%)
Query: 144 SPS--VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
SP+ V+ +N ++R + + A + ++R+ ++PD+YT+ ++I GL D+
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAE 123
Query: 202 LFWL--QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI 259
+ L +Q+ DL + + L+++ ++G ++A +F + DL+++NS+I
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLI 179
Query: 260 NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL------------------------- 294
+ + + EA + E++++ + PD+ + S++L
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 295 ----------AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
A+Y+ R +A VF EM D + D + N MI Y +L MVEE R+
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEM-DVR---DSVSYNTMICGYLKLEMVEESVRM 295
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
F +P++++ +++LR G A +++ M K G N +I++Y K
Sbjct: 296 FLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR---------- 454
+ A ++ M+ + +++++IIS + ++G L A LF+ +
Sbjct: 355 CGDMITARDVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 455 -------------------------SSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
SG+ ID + +I Y + G V + ++ +
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF------------------ 531
D + T I R V Q + V D++ F
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 532 -----------------GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFG 574
+I +YS+ N VFE+M D ++ A+G
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR----RDVVTWTGMIYAYG 586
Query: 575 KLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESL--FEKLDSNPNINK 632
E EKA ++ + G V PD V F + +Y + E L FEK+ ++ I+
Sbjct: 587 MYGEGEKALETFADMEKSGIV-PDSVVFIAI-IYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 633 K-ELHLVVSGIYERADRLNDASRIMNRMNHK 662
E + V + R+ +++ A + M K
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIK 675
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 169/383 (44%), Gaps = 23/383 (6%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVL-----RAKQWHLAHGLFDE 172
VS + R R L+L +I L + F +RN+L + A +F+
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAG--FVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M + D +++++I+ + + G L ++ + M D + Y LI +S +L D
Sbjct: 368 MECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 233 YSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYST 292
+ + S I DL N++I+++ K ++ + M DTV+++T
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWNT 479
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+++ V F L V ++M ++ D+ T + + + L G + + + G
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
E + N L+ +Y + + +F M ++ +VVT+ MI YG E EKA
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKAL 595
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL--YQTMIV 470
+M+ +GI P+++ + II +G +D F+K+++ +ID ++ Y ++
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH-YKIDPMIEHYACVVD 654
Query: 471 AYERAGLVAHAKRLLHELK-RPD 492
R+ ++ A+ + + +PD
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPD 677
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 151/336 (44%), Gaps = 38/336 (11%)
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
+ ++S+F R+ S A ++ +NS+I F K LF EA ++R++ V PD ++ ++
Sbjct: 56 ASSLSVFRRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSV 112
Query: 294 L---AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+ A D E V+ ++ D DL N ++D+Y ++ ++ ++F M
Sbjct: 113 IKACAGLFDAEM---GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV 169
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
++VS+N+L+ Y + EA+ ++ ++ + + T ++++ +G
Sbjct: 170 R----DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG------- 218
Query: 411 ATNLIQEMQNNGIQPNAI---------TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
NL+ Q G+ A+ + +++++ K + A +F ++ D
Sbjct: 219 --NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----D 272
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHE---LKRPDNIPRETAIMVLARARRVEEATWVFRQ 518
V Y TMI Y + +V + R+ E +PD + + + R + A +++
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
AG V + +V +I++Y++ +VF M
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 159/392 (40%), Gaps = 44/392 (11%)
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
FRE L R + +++++ + N F EAL + ++ ++K D T
Sbjct: 52 FREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPS 111
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+I L E GD ++ + MG E ++ N L+ +Y L A +F M +
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR- 170
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
++V++N++I+ Y +E+A + E++N+ I P++ T S+++ + + +
Sbjct: 171 ---DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
L SGV V+ ++ Y + A+R+ E+ D++ T I +
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
VEE+ +F +E ++ + PD ++
Sbjct: 288 MVEESVRMF-------------------------------LENLDQFK-----PDLLTVS 311
Query: 568 LVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSN 627
VL A G LR+ A +Y+ + G V V ++ +Y D +F ++
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 628 PNINKKELHLVVSGIYERADRLNDASRIMNRM 659
++ + ++SG + D L +A ++ M
Sbjct: 372 DTVS---WNSIISGYIQSGD-LMEAMKLFKMM 399
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 204/439 (46%), Gaps = 49/439 (11%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V ++ +++ + + +A LF +M ++ ++ +++ ++ F + G +D + L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACK-L 163
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+M D D + +++I K G +A IF + S+ I + +M+ +G+
Sbjct: 164 YEMIPDK---DNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQN 216
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD-LTT 324
+AR + M + VS++++L YV N R +A +F M P+ +
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVM-----PVKPVIA 267
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
CN MI GQ + + R+F SM+ E N S+ T+++++ + EA+ LF LMQ
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMK----ERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 385 KKGVQQNVVTYNTMINIYG-----KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
K+GV+ T+ T+I+I SL H K + ++ + S +++++ K
Sbjct: 324 KQGVRP---TFPTLISILSVCASLASLHHGKQVH--AQLVRCQFDVDVYVASVLMTMYIK 378
Query: 440 AGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-----RPDNI 494
G+L ++ ++F + S D +++ ++I Y GL A ++ E+ +P+ +
Sbjct: 379 CGELVKSKLIFDRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV-FGCMINLYSRNKKYTNVVEVFEK 553
+ + A VEE ++ + V I+ + CM+++ R ++ +E+ +
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 554 MREVGYFPDSNVIALVLNA 572
M PD+ V +L A
Sbjct: 495 MT---VEPDAAVWGSLLGA 510
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 180/406 (44%), Gaps = 37/406 (9%)
Query: 223 LIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
+ LSR +G +A +F + SI+ ++NSM+ + + R+AR L EM D
Sbjct: 24 ITHLSR-IGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 283 VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
+ +S++ L++ Y+ N EA VF M + ++ + ++ Y V+ +
Sbjct: 79 I----ISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAE 130
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
LFW M E N VS+ +L + + +A L+ ++ K + + +MI+
Sbjct: 131 SLFWKMP----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGL 182
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
K ++A + EM + IT++T+++ + + ++D A +F + + +
Sbjct: 183 CKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMP----EKTE 234
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
V + +M++ Y + G + A+ L + I I L + + +A VF +
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD---SM 291
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKA 582
E ND S + +I ++ RN +++F M++ G P + +L+ L
Sbjct: 292 KERNDAS-WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 583 DALYSQIHDEGCVFPDEVHFQ--MLSLYGARKDFTMVESLFEKLDS 626
+++Q+ C F +V+ ++++Y + + +F++ S
Sbjct: 351 KQVHAQLVR--CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 35/311 (11%)
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD------LTTCNIMIDVYGQLHMVEEGD 342
+YST + N R LS ++++A+ D +++ N M+ Y M +
Sbjct: 10 TYSTTIPPPTANVRITH-LSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDAR 68
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY 402
+LF M + N++S+N L+ Y ++ EA +F LM ++NVV++ ++ Y
Sbjct: 69 KLFDEMP----DRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGY 120
Query: 403 GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ 462
+ + + A +L +M + N ++++ ++ + + G++D A L++ + D
Sbjct: 121 VHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DN 172
Query: 463 VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
+ +MI + G V A+ + E+ I T + + RV++A +F
Sbjct: 173 IARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL--VLNAFGKLREFE 580
EV+ S M+ Y +N + + E+FE M P VIA +++ G+ E
Sbjct: 233 TEVSWTS----MLMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIA 282
Query: 581 KADALYSQIHD 591
KA ++ + +
Sbjct: 283 KARRVFDSMKE 293
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 198/443 (44%), Gaps = 15/443 (3%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
VF++N+++ R K++ + L EM + ++P T +++ K D +
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+ + L L + L+ G+ A+ IF +KA D+I++ S++ + +
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERG 316
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
+ AR +M D +S++ ++ Y+ F E+L +F EM A D T
Sbjct: 317 NLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++ L +E G+ + + K I+ +VV N L+ +Y + +A +F M
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-- 430
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
Q++ T+ M+ + + ++A + +MQ+ IQP+ ITY ++S +G +D+A
Sbjct: 431 --QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 488
Query: 447 AMLFQKLRSSG-VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
F K+RS ++ V Y M+ RAGLV A +L ++ N A++ +R
Sbjct: 489 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASR 548
Query: 506 ARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
E + + E ++ +V+ + N+Y+ K++ ++ EV K+ +V
Sbjct: 549 LHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGF 608
Query: 566 IALVLNAFGKLREFEKADALYSQ 588
+ +N F EF D + Q
Sbjct: 609 SLIEVNGFA--HEFVAGDKSHLQ 629
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 142/363 (39%), Gaps = 46/363 (12%)
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
SR G S A +F ++ PD++ +N+MI + K E L M GV PD
Sbjct: 78 SRLGGHVSYAYKLFVKIPE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPD 133
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
+ ++ LL N K C G +L
Sbjct: 134 SHTFPFLL-------------------NGLKRDGGALAC---------------GKKLHC 159
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
+ K G+ N+ N L+++Y L A +F + +++V ++N MI+ Y +
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVF----DRRCKEDVFSWNLMISGYNRMK 215
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E+E++ L+ EM+ N + P ++T ++S K D + + + + L
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 467 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
++ AY G + A R+ +K D I + + ++ A F Q V
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM----PVR 331
Query: 527 DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALY 586
D + MI+ Y R + +E+F +M+ G PD + VL A L E + +
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 587 SQI 589
+ I
Sbjct: 392 TYI 394
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 199/487 (40%), Gaps = 49/487 (10%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG-LLDSSLF 203
P V +N +++ + L+ M + G+ PD +T+ L+ + G L
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ + + +L + + L+++ G A +F R D+ ++N MI+ +
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR----RCKEDVFSWNLMISGYN 212
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+ K + E+ LL EM N V P +V+ +L+ + V +++ K L
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
N +++ Y ++ R+F SM+ +V+S+ ++++ Y E A F M
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ + +++ MI+ Y ++ ++ + +EMQ+ G+ P+ T ++++ G L
Sbjct: 329 PVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
+ + + + ++ D V+ +I Y + G A+++ H++ + D
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF--------- 435
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDS 563
TW A G N N + ++VF +M+++ PD
Sbjct: 436 ---------TWT---AMVVGLAN--------------NGQGQEAIKVFFQMQDMSIQPDD 469
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFE 622
VL+A ++A ++++ + + P VH+ M+ + G +
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Query: 623 KLDSNPN 629
K+ NPN
Sbjct: 530 KMPMNPN 536
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 230/544 (42%), Gaps = 50/544 (9%)
Query: 140 KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLA---PDRYTYSTLITHFGKHG 196
K + +P++F++NV +R ++ + L+ +M + G PD +TY L
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 197 LLDSSLFWLQQMEQDNVSGDLV--LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIA 254
L SSL + + +LV +++ I + GD A +F S DL++
Sbjct: 171 L--SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE----SPVRDLVS 224
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
+N +IN + K +A + + M GV PD V+ L V + S+ ++N
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL----------VSSCSMLGDLN 274
Query: 315 DAK----------CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
K + + N ++D++ + + E R+F ++ K +VS+ T++
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMI 330
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y L + LF M++K +VV +N MI ++ + A L QEMQ + +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P+ IT +S + G LD + + + + ++ L +++ Y + G ++ A +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 485 LHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKY 544
H ++ +++ I LA A F + AG D F +++
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 545 TNVVEVFEKMRE-VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ 603
+ F +M+ P +++++ G+ E+AD L + E D +
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA----DAAVWG 562
Query: 604 MLSLYGAR--KDFTMVESLFEK-LDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMN 660
L L+G R + + E +K L+ +P + +++++ G+Y A+ DA R MN
Sbjct: 563 AL-LFGCRMHGNVELGEKAAKKLLELDP--SDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 661 HKAI 664
+ +
Sbjct: 620 ERGV 623
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 162/361 (44%), Gaps = 44/361 (12%)
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNE-RFVE-ALSV 309
+ +N ++++ K KL + + +M NG+ D + S L+A +E R+++ ++ +
Sbjct: 50 FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKI 109
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI---EPNVVSYNTLLRV 366
+ + ++ + N+ I + + +E L+ M + G P+ +Y L +V
Sbjct: 110 LKGIENP----NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 367 YGE----------------------SELFGEAIHLF---------RLMQKKGVQQNVVTY 395
+ S + +IH+F R + + +++V++
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
N +IN Y K E EKA + + M++ G++P+ +T ++S G L+R ++ ++
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 456 SGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWV 515
+G+++ L ++ + + G + A+R+ L++ + T I AR ++ V
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD----V 341
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
R+ F E D+ ++ MI + K+ + + +F++M+ PD + L+A +
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 576 L 576
L
Sbjct: 402 L 402
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 133 LLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF 192
L D + EK V +N ++ ++AK+ A LF EM+ PD T ++
Sbjct: 345 LFDDMEEK-----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDL 252
+ G LD ++ + +E+ ++S ++ L ++L+++ K G+ S+A+S+F ++ +
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NS 455
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
+ Y ++I A EM D G+ PD +++ LL+ FS+
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 515
Query: 313 MNDA-KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL------- 364
M L +IM+D+ G+ ++EE DRL M M +E + + LL
Sbjct: 516 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL---MESMPMEADAAVWGALLFGCRMHG 572
Query: 365 ---------------------------RVYGESELFGEAIHLFRLMQKKGVQQ 390
+YGE+ ++ +A R+M ++GV++
Sbjct: 573 NVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 184/410 (44%), Gaps = 15/410 (3%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQ--RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
N V+ N L LA G+ ++ Q RG+ D +++ +I ++GL ++ ++M
Sbjct: 204 NTVMYNSLMGGL--LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ + D + +++ LG ++ I A + ++ + +++I+++ K K
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
A+ + M+ V VS++ ++ Y R EA+ +F +M + D T
Sbjct: 322 HYAKTVFDRMKQKNV----VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
I + +EEG + G+ V N+L+ +YG+ ++ LF M +
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-- 435
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ V++ M++ Y + + L +M +G++P+ +T + +IS +AG +++
Sbjct: 436 --DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 449 LFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
F+ + S G+ Y MI + R+G + A R ++ + P + T ++ R +
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 508 -RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+E W ++ + + + + + ++Y+ K+ +V ++ MRE
Sbjct: 554 GNLEIGKWA-AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 161/393 (40%), Gaps = 49/393 (12%)
Query: 217 LVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ 276
L++ S L+ + +G S A +F L + + YNS++ + +A L +
Sbjct: 174 LLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFR 229
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
M D+VS++ ++ N EA+ F EM +D ++ G L
Sbjct: 230 GMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 337 MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYN 396
+ EG ++ + + + ++ + L+ +Y + + A +F M+ Q+NVV++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK----QKNVVSWT 340
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
M+ YG++ E+A + +MQ +GI P+ T IS L+ + K +S
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVF 516
G+ + +++ Y + G + + RL +E+ D + +W
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV------------------SWT- 441
Query: 517 RQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
M++ Y++ + +++F+KM + G PD + V++A +
Sbjct: 442 ----------------AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQ-MLSLY 608
EK + + E + P H+ M+ L+
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 29/324 (8%)
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLF-RLMQKKGVQQNVVTYN-TMINIYGKSLEHEKA 411
+PN+ S+N LL Y ++ L E F +L + GV NV+ ++ + G ++ KA
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV---KA 125
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
N + M++ +T T++ + G + + ++ G + ++ ++
Sbjct: 126 YNTM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 472 YERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
Y G ++ AK++ + L + + + + L +E+A +FR G D +
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSW 238
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
MI ++N +E F +M+ G D VL A G L + QIH
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG----KQIH- 293
Query: 592 EGCV----FPDEVHF--QMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYER 645
C+ F D ++ ++ +Y K +++F+++ N +V G Y +
Sbjct: 294 -ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK---NVVSWTAMVVG-YGQ 348
Query: 646 ADRLNDASRIMNRMNHKAIGNHDH 669
R +A +I M I + DH
Sbjct: 349 TGRAEEAVKIFLDMQRSGI-DPDH 371
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 197/438 (44%), Gaps = 24/438 (5%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK-HGLLDSSLFWLQ 206
F++ ++R + + +++ ++ +M G+ P + ++++ GK ++D Q
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+ ++ + G + + + L+ L +LG A F + + +++NS+++ + ++
Sbjct: 130 AL-KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----NTVSWNSLLHGYLESG 184
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
EAR + ++ + D VS++ +++ Y A S+FS M K P + N
Sbjct: 185 ELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAM-PLKSP---ASWN 236
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
I+I Y ++ F +M + N VS+ T++ Y + A LFRLM KK
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMP----QKNGVSWITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEM--QNNGIQPNAITYSTIISIWEKAGKLD 444
+ + Y+ MI Y ++ + + A L +M +N+ IQP+ IT S+++S + G
Sbjct: 293 ----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLA 504
+ + G++ID +L ++I Y + G A A ++ L + D + IM
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 505 RARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSN 564
EA +F ++ F +++ YS + + F M++ P ++
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 565 VIALVLNAFGKLREFEKA 582
++++ G+ E+A
Sbjct: 469 HYGIMVDMLGRAGRLEEA 486
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 164/362 (45%), Gaps = 57/362 (15%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
+S ++S +++ D A +L + L SP+ ++N+++ + ++ LA FD
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLF---SAMPLKSPA--SWNILIGGYVNCREMKLARTYFD 256
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
M Q+ + ++ T+I+ + K G + S+ + M + D ++Y +I + G
Sbjct: 257 AMPQK----NGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNG 308
Query: 232 DYSKAISIFARL--KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
A+ +FA++ + S I PD I +S+++ + + + ++G+ D +
Sbjct: 309 KPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLL 368
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
++L+ +Y+ F +A +FS +N
Sbjct: 369 STSLIDLYMKGGDFAKAFKMFSNLN----------------------------------- 393
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ + VSY+ ++ G + + EA LF M +K + NVVT+ +++ Y S +
Sbjct: 394 ----KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+ M+++ ++P+A Y ++ + +AG+L+ A ++ ++S +Q + ++ ++
Sbjct: 450 EGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEA---YELIKSMPMQPNAGVWGALL 506
Query: 470 VA 471
+A
Sbjct: 507 LA 508
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 153/359 (42%), Gaps = 47/359 (13%)
Query: 165 LAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM-EQDNVSGDLVLYSNL 223
LA FD++ ++ + ++++L+ + + G LD + ++ E+D VS +L++ S
Sbjct: 157 LAKKAFDDIAEK----NTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS-- 210
Query: 224 IELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM-RDNG 282
K GD A S+F+ + S A ++N +I + + + AR M + NG
Sbjct: 211 ---YAKKGDMGNACSLFSAMPLKSPA----SWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 283 VC--------------------------PDTVSYSTLLAIYVDNERFVEALSVFSEM--N 314
V D + Y ++A Y N + +AL +F++M
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
++ D T + ++ QL G + + + GI+ + + +L+ +Y + F
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+A +F + KK + V+Y+ MI G + +A +L M I PN +T++ ++
Sbjct: 384 KAFKMFSNLNKK----DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 493
S + +G + F ++ ++ Y M+ RAG + A L+ + N
Sbjct: 440 SAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPN 498
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 167/413 (40%), Gaps = 67/413 (16%)
Query: 225 ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
E SR + Y K I LK + D ++ ++ + + F+E + +M ++G+
Sbjct: 48 EFSRNIVTYVKRI-----LKGFN-GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIP 101
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSE-MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
P + + +++L E V+ + ++ + + C ++ +Y +L +E +
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTG-LVGLYSRLGYIELAKK 160
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
F + E N VS+N+LL Y ES EA +F + +K + V++N +I+ Y
Sbjct: 161 AFDDIA----EKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYA 212
Query: 404 KSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
K + A +L M + +++ +I + ++ A F + Q + V
Sbjct: 213 KKGDMGNACSLFSAMP----LKSPASWNILIGGYVNCREMKLARTYFDAMP----QKNGV 264
Query: 464 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
+ TMI Y + G V A+ L + + D +
Sbjct: 265 SWITMISGYTKLGDVQSAEELFRLMSKKDKL----------------------------- 295
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF--PDSNVIALVLNAFGKLREFEK 581
V+ MI Y++N K + +++F +M E + PD ++ V++A +L
Sbjct: 296 ------VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSF 349
Query: 582 ADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKE 634
+ S I + G D + ++ LY DF +F N+NKK+
Sbjct: 350 GTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS------NLNKKD 396
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 170/344 (49%), Gaps = 25/344 (7%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
M++ ++ D + A D + EK SV ++N +L + A LF++M +
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEK-----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 177 GLAPDRYTYSTLIT--HFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
G+ P+ T+ +I+ F L SL ++ +++ V + + + L+++ K D
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSL--VKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
A IF L +L+ +N+MI+ + + AR L M V VS+++L+
Sbjct: 317 SARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLI 369
Query: 295 AIYVDNERFVEALSVFSEM---NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM 351
A Y N + A+ F +M D+K P ++T +++ G + +E GD + +RK
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSK-PDEVTMISVL-SACGHMADLELGDCIVDYIRKN 427
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
I+ N Y +L+ +Y EA +F M+ +++VV+YNT+ + + + +
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSYNTLFTAFAANGDGVET 483
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
NL+ +M++ GI+P+ +TY+++++ +AG L +F+ +R+
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 179/418 (42%), Gaps = 69/418 (16%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+VF N + + + + L+++ + G+ PD +++ +I G+ G+L +L
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 205 LQQMEQD----NVSGDLVLYSNLIELSRKL---------GDYSKAISIFAR-------LK 244
+D NV D+ + +E +RK+ D++ IS + + K
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 245 ASSIAP--DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNER 302
+ P D++++ MI F K K AR M + V VS++ +L+ Y N
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAMLSGYAQNGF 244
Query: 303 FVEALSVFSEM-------NDAKCPLDLTTCNI---------------------------- 327
+AL +F++M N+ + ++ C+
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 328 MIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
++D++ + ++ R+F ++G + N+V++N ++ Y A LF M K+
Sbjct: 305 LLDMHAKCRDIQSARRIF---NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR- 360
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG-IQPNAITYSTIISIWEKAGKLDRA 446
NVV++N++I Y + + A ++M + G +P+ +T +++S L+
Sbjct: 361 ---NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLA 504
+ +R + ++++ Y+++I Y R G + AKR+ E+K D + T A
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFA 475
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 159/339 (46%), Gaps = 6/339 (1%)
Query: 228 RKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV-CPD 286
+++ D +A+S+F + + D +Y+S+I K++ F +L+ +R V C +
Sbjct: 57 KEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRE 116
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
++ + L+ Y +A+ VF ++ C + + N +I+V +E+ F
Sbjct: 117 SL-FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
+ M + PN VS+N L++ + + + A +F M + VQ +VVTYN++I ++
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
+ KA +L+++M I+PNA+T+ ++ G+ + A L + G + V Y
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 467 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFRQAFAA 522
++ + G + AK LL E+K +PD + + L RV EA V +
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 523 GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
G + + + MI+ + R + + + + V M + P
Sbjct: 356 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 158/368 (42%), Gaps = 2/368 (0%)
Query: 114 IRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEM 173
+ F+ L E D + AL+L E + +Y+ ++ + +++ + + +
Sbjct: 50 VPFLTDLKEIE-DPEEALSLFHQYQEMG-FRHDYPSYSSLIYKLAKSRNFDAVDQILRLV 107
Query: 174 RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDY 233
R R + + LI H+GK G +D ++ ++ + + + LI + G+
Sbjct: 108 RYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGEL 167
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
KA S F K + P+ +++N +I F + A + EM + V P V+Y++L
Sbjct: 168 EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ N+ +A S+ +M + + T +++ E +L + M G
Sbjct: 228 IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+P +V+Y L+ G+ EA L M+K+ ++ +VV YN ++N +A
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
++ EMQ G +PNA TY +I + + D + + +S + M+
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 474 RAGLVAHA 481
+ G + HA
Sbjct: 408 KGGNLDHA 415
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 8/302 (2%)
Query: 100 LHAVMSLYNQRQL-SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVL 158
H + S R + S+ ++++L + ++A + D + L P+ ++N++++ L
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL-RPNSVSFNILIKGFL 197
Query: 159 RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV 218
W A +FDEM + + P TY++LI ++ + + L+ M + + + V
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
+ L++ G+Y++A + ++ P L+ Y +++ GK EA+LLL EM
Sbjct: 258 TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
+ + PD V Y+ L+ R EA V +EM C + T +MID + ++
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK------GVQQNV 392
+ G + +M P ++ ++ + A + +M KK G QN+
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNL 437
Query: 393 VT 394
++
Sbjct: 438 LS 439
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 36/313 (11%)
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD---YSKAISIFARLKASSIAPDL 252
GL D +L+Q+ + ++V +++ L + LG+ +A++ F R+K PD+
Sbjct: 145 GLWD----FLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDV 200
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGV--CPDTVSYSTLLAIYVDNERFVEALSVF 310
AYN++IN + F++AR LL +M+ G PDT +Y+ L++ Y
Sbjct: 201 YAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY------------- 247
Query: 311 SEMNDAKCPLDLTT-CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
C + T C I + E +R+F M G P+VV+YN L+ +
Sbjct: 248 -------CRYGMQTGCRKAIR-----RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ-PNAI 428
+ G A+ LF M+ KG N VTYN+ I Y + E E A +++ M+ G P +
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS 355
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
TY+ +I + + A L ++ +G+ + Y+ + A GL + LH+
Sbjct: 356 TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKR 415
Query: 489 KRPDNIPRETAIM 501
R R + +M
Sbjct: 416 MREGIQQRYSRVM 428
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
SI ++ L E + ALA + E P V+AYN ++ + R + A L D+
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHC-KPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 173 MRQRGL--APDRYTYSTLITHFGKHGLLDSS------LFW-----LQQMEQDNVSGDLVL 219
M+ G PD YTY+ LI+ + ++G+ W ++M D+V
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 220 YSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR 279
Y+ LI+ K +A+ +F +K P+ + YNS I + A +++ M+
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 280 DNG-VCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA 316
G P + +Y+ L+ V+ R EA + EM +A
Sbjct: 346 KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 18/253 (7%)
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+ LLA D + + L S + K + + ++ G+ V+E F+ M++
Sbjct: 134 ACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKE 193
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI-----YGKS 405
+P+V +YNT++ F +A L MQ G + TY I I YG
Sbjct: 194 YHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQ 253
Query: 406 LEHEK--------ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
K A + +EM G P+ +TY+ +I K ++ RA LF+ +++ G
Sbjct: 254 TGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG 313
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-----PDNIPRETAIMVLARARRVEEA 512
+QV Y + I Y + A ++ +K+ P + I L RR EA
Sbjct: 314 CVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEA 373
Query: 513 TWVFRQAFAAGEV 525
+ + AG V
Sbjct: 374 RDLVVEMVEAGLV 386
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 90/224 (40%), Gaps = 25/224 (11%)
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT---YNTMIN 400
FW G + N ++ + + + F R + ++ +NVVT ++
Sbjct: 114 FFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMK 173
Query: 401 IYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQI 460
G+ ++A M+ +P+ Y+TII+ + G +A L +++ G +
Sbjct: 174 CLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRY 233
Query: 461 --DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQ 518
D Y +I +Y R G+ ++ + RR+ EA +FR+
Sbjct: 234 PPDTYTYTILISSYCRYGMQTGCRKAIR--------------------RRMWEANRMFRE 273
Query: 519 AFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
G V D+ + C+I+ + + +E+FE M+ G P+
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 117 MVSLLSRETDWQRALALLDWINEKAL-YSPSVFAYNVVL------------RNVLRAKQW 163
+++ L R ++++A LLD + Y P + Y +++ R +R + W
Sbjct: 206 IINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMW 265
Query: 164 HLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNL 223
A+ +F EM RG PD TY+ LI K + +L + M+ + V Y++
Sbjct: 266 E-ANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSF 324
Query: 224 IELSRKLGDYSKAISIFARLKA-SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNG 282
I + AI + +K P Y +I+ + + EAR L+ EM + G
Sbjct: 325 IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Query: 283 VCPDTVSY 290
+ P +Y
Sbjct: 385 LVPREYTY 392
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 160/350 (45%), Gaps = 15/350 (4%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
F N ++ + + A LFD + D T++ +I F ++G ++ + +
Sbjct: 139 FVRNSLISGYSSSGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA-RLKASSIAPDLIAYNSMINVFGKAK 266
M++ V+ + + ++++ + K+ D S+ L+ + D+ +S+++++GK
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
+ +A+ + EM V V+++ L+A YV + F + + VF EM + + T +
Sbjct: 255 CYDDAQKVFDEMPSRNV----VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++ + + G R+ M K IE N + TL+ +Y + EAI +F + +K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
NV T+ MIN + A +L M ++ + PN +T+ ++S G ++
Sbjct: 371 ----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 447 AMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPDNI 494
LF ++ ++ Y M+ + R GL+ AK L+ + P N+
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 172/397 (43%), Gaps = 31/397 (7%)
Query: 170 FDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ-QMEQDNVSGDLVLYSNLIELSR 228
+ MR+ G+ P R+T+ L+ K L DS+ F + + + D + ++LI
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFK--LRDSNPFQFHAHIVKFGLDSDPFVRNSLIS--- 146
Query: 229 KLGDYSKAISIFA-RLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDT 287
G S + FA RL + D++ + +MI+ F + EA + EM+ GV +
Sbjct: 147 --GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANE 204
Query: 288 VSYSTLL--AIYVDNERFVEAL-SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL 344
++ ++L A V++ RF ++ ++ E KC D+ + ++D+YG+ ++ ++
Sbjct: 205 MTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC--DVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 345 FWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK 404
F M NVV++ L+ Y +S F + + +F M K V N T +++++
Sbjct: 263 FDEMPSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 405 SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL 464
+ + M N I+ N +T+I ++ K G L+ A ++F++L V
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT---- 374
Query: 465 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL----ARARRVEEATWVFRQAF 520
+ MI + G A L + + P E M + A VEE +F
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS-- 432
Query: 521 AAGEVN---DISVFGCMINLYSRNKKYTNVVEVFEKM 554
G N + CM++L+ R + E+M
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 144/334 (43%), Gaps = 35/334 (10%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
S +V + ++ ++++ + +F+EM + +AP+ T S++++ G L
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
M ++++ + + LI+L K G +AI +F RL ++ + +MIN F
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV----YTWTAMINGFA 383
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN---DAKCPL 320
R+A L M + V P+ V++ +L+ E +F M + +
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKA 443
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D C M+D++G+ ++EE L + +M +EP V + L S L + L
Sbjct: 444 DHYAC--MVDLFGRKGLLEEAKAL---IERMPMEPTNVVWGALF----GSCLLHKDYELG 494
Query: 381 RLMQKKGVQ---QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+ + ++ + Y + N+Y +S ++ + ++M++ + S S
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKD-----QQVVKSPGFSWI 549
Query: 438 EKAGKL-------DRAAM----LFQKLRSSGVQI 460
E GKL D+ + L++ L + GVQ+
Sbjct: 550 EVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQM 583
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
PS Y++++R R + A +FDEM +R D Y+ L+ K G +D
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
Q+M + D ++ I GD A + R+K + P++ +N +I K
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ +A LLL EM G PDT +Y++++A + D+ A + S M+ KC D T
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT----LLRVYGESELFGEAIHLF 380
N+++ + ++ + ++ M + P V +Y L+R G+ E EA F
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLE---EACRYF 442
Query: 381 RLMQKKGVQQNVVTYNTMIN 400
+M +G+ T + N
Sbjct: 443 EMMIDEGIPPYSTTVEMLRN 462
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%)
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
S+A F R+ I P + + +++ K A+ + + G+ P +YS L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ + A VF EM + C +DL N ++D + V+ G ++F M +G+
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+P+ S+ + Y ++ A + M++ + NV T+N +I K+ + + A
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L+ EM G P+ TY++I++ +++RA L ++ + D+ Y ++
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 474 RAG 476
R G
Sbjct: 395 RIG 397
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 37/291 (12%)
Query: 220 YSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR 279
YS L+ ++ D S A +F + + DL+AYN++++ K+ + QEM
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 280 DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVE 339
+ G+ PD S++ + Y D A V
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL----------------------------- 301
Query: 340 EGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
DR M++ + PNV ++N +++ ++E +A L M +KG + TYN+++
Sbjct: 302 --DR----MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+ E +AT L+ M P+ TY+ ++ + + G+ DRA +++ +
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 460 IDQVLYQTMIVAYER-AGLVAHAKRLLHELKRPDNIPRETAIMVLARARRV 509
Y MI R G + A R E+ + IP + + + R R V
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYF-EMMIDEGIPPYSTTVEMLRNRLV 465
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 4/264 (1%)
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
I+ Y + ++ E R F M + GI+P V + LL + + A F +
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G+ + TY+ ++ + + + A + EM + + Y+ ++ K+G +D
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMV 502
+FQ++ + G++ D + I AY AG V A ++L +KR D +P I
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
L + +V++A + + G D + ++ + + + ++ +M PD
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 563 SNVIALVLNAFGKLREFEKADALY 586
+ +VL ++ F++A ++
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIW 406
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 183/406 (45%), Gaps = 16/406 (3%)
Query: 101 HAVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRA 160
H+V S ++ +++ R+ + L L +IN+ + +P++ YN++ + L
Sbjct: 120 HSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI-APNIITYNLIFQAYLDV 178
Query: 161 KQWHLA---HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
++ +A + LF + L P T+ L+ + L+ ++ + M D
Sbjct: 179 RKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDP 236
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKA--SSIAPDLIAYNSMINVFGKAKLFREARLLL 275
V+YS L+ K D + ++ LK D + Y ++ + ++ +EA
Sbjct: 237 VVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECY 296
Query: 276 QEM--RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCP-----LDLTTCNIM 328
+E ++ V ++Y+ +L +N +F EAL +F + P ++L T N+M
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM 356
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
++ Y EE +F M P+ +S+N L+ ++EL EA L+ M++K V
Sbjct: 357 VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ + TY +++ K + ++ + M + ++PN Y+ + KAGKLD A
Sbjct: 417 KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS 476
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
F + S +++D Y+ ++ A AG + +++ E+ D +
Sbjct: 477 FFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV 521
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 146/348 (41%), Gaps = 42/348 (12%)
Query: 343 RLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL-MQKKGVQQNVVTYNTMINI 401
+L + + GI PN+++YN + + Y + A+ ++L + + ++ T+ ++
Sbjct: 151 QLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKG 210
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS--SGVQ 459
+ EKA + ++M G + + YS ++ K D L+Q+L+ G
Sbjct: 211 LVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFV 270
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIM------VLARARRVEEAT 513
D V+Y ++ Y + A E ++ R +A+ L+ + +EA
Sbjct: 271 DDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEAL 330
Query: 514 WVFRQAFAAGEVN-------DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
+F E N ++ F M+N Y K+ +EVF +M + PD+
Sbjct: 331 KLFDAV--KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSF 388
Query: 567 ALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML--SLY-------GARKDFTMV 617
++N +A+ LY ++ +E V PDE + +L + + GA TMV
Sbjct: 389 NNLMNQLCDNELLAEAEKLYGEM-EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV 447
Query: 618 ESLFEKLDSNPNI---NKKELHLVVSGIYERADRLNDASRIMNRMNHK 662
ES + PN+ N+ + L+ +G +L+DA + M K
Sbjct: 448 ES-----NLRPNLAVYNRLQDQLIKAG------KLDDAKSFFDMMVSK 484
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 158/335 (47%), Gaps = 13/335 (3%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A +FD++ + PD +++ +I +G D ++ QM D + +L+
Sbjct: 324 ARRVFDQIER----PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLC 379
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
K S+ + I + + DL NS++ ++ L ++ R+N
Sbjct: 380 AQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA--- 436
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D+VS++T+L + +E+ VE L +F M ++C D T ++ ++ ++ G ++
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
K G+ P N L+ +Y + G+A +F M + +VV+++T+I Y +S
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQS 552
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS-GVQIDQVL 464
E+A L +EM++ GI+PN +T+ +++ G ++ L+ +++ G+ +
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRET 498
++ RAG + A+R + E+K PD + +T
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKT 647
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 158/359 (44%), Gaps = 19/359 (5%)
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNV--SGDLVLYSNLIELSRKL-GDYSKAI 237
D ++S++I F + G +L L++M V + + S+L S L DY
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS-- 290
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY 297
I S +A + IA S+ +++ + AR + ++ PDT S++ ++A
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGL 346
Query: 298 VDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNV 357
+N EA+SVFS+M + D + ++ + + +G ++ + K G ++
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL 406
Query: 358 VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN---L 414
N+LL +Y + F L + + V++NT++ L+HE+ L
Sbjct: 407 TVCNSLLTMY---TFCSDLYCCFNLFEDFRNNADSVSWNTILT---ACLQHEQPVEMLRL 460
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ M + +P+ IT ++ + L + + +G+ +Q + +I Y +
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG-EVNDISVFG 532
G + A+R+ + D + T I+ A++ EEA +F++ +AG E N ++ G
Sbjct: 521 CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 142/325 (43%), Gaps = 11/325 (3%)
Query: 251 DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVF 310
D I N +++++GK R+AR + M + + VSY++++ Y N + EA+ ++
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNL----VSYTSVITGYSQNGQGAEAIRLY 156
Query: 311 SEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGES 370
+M D +I V G +L + K+ ++++ N L+ +Y
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 371 ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGK-SLEHEKATNLIQEMQNNGI-QPNAI 428
+A +F + K ++++++++I + + E E ++L +EM + G+ PN
Sbjct: 217 NQMSDASRVFYGIPMK----DLISWSSIIAGFSQLGFEFEALSHL-KEMLSFGVFHPNEY 271
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+ + + + D + + S + + + ++ Y R G + A+R+ ++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 489 KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVV 548
+RPD I LA +EA VF Q ++G + D ++ ++ + +
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 549 EVFEKMREVGYFPDSNVIALVLNAF 573
++ + + G+ D V +L +
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMY 416
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 222/525 (42%), Gaps = 22/525 (4%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
+P + NV+L++ ++ LA LF+E+ ++ D T++TLIT + K GL S+
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DSVTFNTLITGYEKDGLYTESIH 236
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+M Q +S +++ L D++ + A + + D N +++ +
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K E R+L EM + D VSY+ +++ Y +++ +L F EM
Sbjct: 297 KHDRVLETRMLFDEMPE----LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
M+ + L ++ G +L + + N+L+ +Y + E+F EA +F+ +
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
Q+ V++ +I+ Y + H L +M+ + ++ + T++T++ L
Sbjct: 413 P----QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIV-AYERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
L + SG ++ V + +V Y + G + A ++ E+ + + I
Sbjct: 469 LLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 503 LARARRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV-GYF 560
A E A F + +G + + +S+ G ++ S E F+ M + G
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILG-VLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVES 619
P A +L+ G+ F +A+ L ++ E PDE+ + +L+ K+ ++ E
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE----PDEIMWSSVLNACRIHKNQSLAER 642
Query: 620 LFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
EKL S + ++ +S IY A + M + I
Sbjct: 643 AAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 149/339 (43%), Gaps = 26/339 (7%)
Query: 229 KLGDYSKAISIFARLKASSIAPD--LIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-- 284
K GD S A +F + PD ++ + ++ + + F EA L ++M + C
Sbjct: 91 KTGDVSSARDLFDAM------PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 285 PDTVSYSTLLAIYVD--NERFVEALSVFS-EMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
PD V+++TLL D + V + F+ ++ P LT N+++ Y ++ ++
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF-LTVSNVLLKSYCEVRRLDLA 203
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
LF + E + V++NTL+ Y + L+ E+IHLF M++ G Q + T++ ++
Sbjct: 204 CVLFEEIP----EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+ L G +A + I+ + K ++ MLF ++ ++D
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP----ELD 315
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFR 517
V Y +I +Y +A + E++ N P T + + A ++ +
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
QA A + + V ++++Y++ + + +F+ + +
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 22/269 (8%)
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+N V+ NTMI+ + K+ + A +L M + + +T++ ++ + + D A
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFK 131
Query: 449 LFQKL-RSSGVQI-DQVLYQTMIVAYERAGLVAHAKRLLHELKRP---DNIPRETAIMVL 503
LF+++ RSS + D V + T++ A + +A +H D P T VL
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDA-VPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 504 ARA----RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGY 559
++ RR++ A +F + D F +I Y ++ YT + +F KMR+ G+
Sbjct: 191 LKSYCEVRRLDLACVLFEEI----PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH 246
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVES 619
P + VL A L +F L++ G V Q+L Y
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRM 306
Query: 620 LFEKLDSNPNINKKELHLVVSGIYERADR 648
LF+++ P ++ ++V+S Y +AD+
Sbjct: 307 LFDEM---PELDFVSYNVVISS-YSQADQ 331
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 153/344 (44%), Gaps = 12/344 (3%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSV----FAYNVVLRNVLRAKQWHLAHGLFDEM 173
+SLL E D R L I A +P A++ + N+ K + L D
Sbjct: 51 LSLLKSEKDPDRILE----ICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGF 106
Query: 174 --RQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
+ L +R+ ++ + + +LD SL + +E+ +S + + L+
Sbjct: 107 IENRPDLKSERFAAHAIVL-YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAK 165
Query: 232 DYSKAISIFARL-KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
DY +A ++ + K I PDL YN MI VF ++ + ++ EM G+ P++ S+
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
+++ + ++ E V + M D + ++T NI I + +E L M
Sbjct: 226 GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS 285
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G++PN V+Y+ L+ + + F EA LF++M +G + + Y T+I K + E
Sbjct: 286 AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFET 345
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
A +L +E P+ ++++ K K++ A L +++
Sbjct: 346 ALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVK 389
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
DL T N MI V+ + + M + GI+PN S+ ++ + + E +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
+M+ +GV V TYN I K + ++A L+ M + G++PN +TYS +I +
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR---- 496
+ A LF+ + + G + D Y T+I + G A L E + +P
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 497 ETAIMVLARARRVEEATWVFRQ 518
++ + LA+ +VEEA + Q
Sbjct: 366 KSLVNGLAKDSKVEEAKELIGQ 387
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 162/356 (45%), Gaps = 22/356 (6%)
Query: 148 FAYNVVLRNVLR---AKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
F +N+++R ++ + Q H ++ MR ++PD +T+ L+ F L
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
Q+ + D + ++L+ + GD A +F S + DL A+NS++N + K
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD----DSGSKDLPAWNSVVNAYAK 140
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-----NDAKCP 319
A L +AR L EM + V +S+S L+ YV ++ EAL +F EM N+A
Sbjct: 141 AGLIDDARKLFDEMPERNV----ISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 320 LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
+ T + ++ G+L +E+G + + K +E ++V L+ +Y + A +
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAITYSTIISIWE 438
F + G +++V Y+ MI ++ L EM ++ I PN++T+ I+
Sbjct: 257 FNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 439 KAGKLDRAAMLFQKL-RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPD 492
G ++ F+ + G+ Y M+ Y R+GL+ A+ + + PD
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 148/319 (46%), Gaps = 20/319 (6%)
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
++ ++N+++ Y ++ L +A LF M ++NV++++ +IN Y ++++A +L
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMP----ERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 416 QEMQ-----NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
+EMQ ++PN T ST++S + G L++ + + V+ID VL +I
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 471 AYERAGLVAHAKRLLHELKRPDNIPRETA-IMVLARARRVEEATWVFRQAFAAGEVNDIS 529
Y + G + AKR+ + L ++ +A I LA +E +F + + +N S
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKM--REVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
V I ++ N + + KM E G P +++ +G+ ++A++ +
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 588 QIHDEGCVFPDEVHFQMLSLYGAR--KDFTMVESLFEKLDSNPNINKKELHLVVSGIYER 645
+ E PD + + L L G+R D E ++L +N ++++S +Y +
Sbjct: 363 SMPME----PDVLIWGSL-LSGSRMLGDIKTCEGALKRLIELDPMNSGA-YVLLSNVYAK 416
Query: 646 ADRLNDASRIMNRMNHKAI 664
R + I + M K I
Sbjct: 417 TGRWMEVKCIRHEMEVKGI 435
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 200/463 (43%), Gaps = 24/463 (5%)
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
+E + D Y+ L++ + + A + S D++ N+++N++ K
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCN 326
EAR + ++M D V+++TL++ Y ++R +AL F++M P + T +
Sbjct: 111 LEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSS 166
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKK 386
++ + G +L K G + NV + LL +Y L +A +F ++ +
Sbjct: 167 VIKAAAAERRGCC-GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
N V++N +I + + EKA L Q M +G +P+ +Y+++ G L++
Sbjct: 226 ----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 447 AMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARA 506
+ + SG ++ T++ Y ++G + A+++ L + D + + + A+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 507 RRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
+EA W F + G N+IS F ++ S + +E M++ G P++
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEIS-FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 566 IALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM----VESLF 621
V++ G+ + +A ++ E + +L+ K+ + E +F
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTA---AIWKALLNACRMHKNTELGAYAAEHVF 457
Query: 622 EKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
E +P H+++ IY R NDA+R+ +M +
Sbjct: 458 ELDPDDPGP-----HVILYNIYASGGRWNDAARVRKKMKESGV 495
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
YSP+ F + V++ ++ H L + G + + S L+ + ++GL+D +
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 216
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+E N V ++ LI + KA+ +F + P +Y S+
Sbjct: 217 LVFDALESRND----VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ + + M +G + +TLL +Y + +A +F D D+
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF----DRLAKRDV 328
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+ N ++ Y Q +E F MR++GI PN +S+ ++L S L E H + L
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
M+K G+ Y T++++ G++ + +A I+EM I+P A + +++
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLN 438
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 202/476 (42%), Gaps = 63/476 (13%)
Query: 146 SVFAYNVVLRNVL-----RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDS 200
S+F +++V+ N L + A +F++M QR D T++TLI+ + +H
Sbjct: 89 SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCD 144
Query: 201 SLFWLQQMEQDNVSGDLVLYSNLIE---------LSRKLGDYSKAISIFARLKASSIAPD 251
+L + QM + S + S++I+ +L + + + S D
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 252 L----------------------IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
L +++N++I + +A L Q M +G P S
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y++L + V + M + L N ++D+Y + + + ++F +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
K +VVS+N+LL Y + EA+ F M++ G++ N +++ +++ S +
Sbjct: 325 KR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+ + + M+ +GI P A Y T++ + +AG L+RA +++ ++ +++ ++
Sbjct: 381 EGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM---PIEPTAAIWKALL 437
Query: 470 VA---YERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG--- 523
A ++ L A+A + EL D P + A R +A V ++ +G
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 524 -------EV-NDISVFGCMINLYSRNKKYT-NVVEVFEKMREVGYFPD-SNVIALV 569
E+ N I +F + + ++ EV K++E+GY PD S+VI V
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHV 553
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/592 (20%), Positives = 253/592 (42%), Gaps = 75/592 (12%)
Query: 88 LASISSTQNEQELHAVM---SLYNQRQLSIRFMVSL-LSRETDWQRALALLDWINEKALY 143
L ++ ++LHA + +L+ ++ + + +L L R+T+ A+ + + + E
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQE---- 79
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
P+V N ++R + Q + A +F EM++ GL D +TY L+ L
Sbjct: 80 -PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYS--KAISIFARLKASSIAPDLIAYNSMINV 261
+E+ +S D+ + + LI+ + G A+ +F ++ D +++NSM+
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGG 194
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDA----- 316
KA R+AR L EM D +S++T+L Y +A +F +M +
Sbjct: 195 LVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 317 ---------------------KCPL---DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
K PL ++ T I+I Y + +++E DRL M G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
++ + + ++L ES L + + ++++ + N N ++++Y K +KA
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
++ ++ + ++++T++ G A LF ++R G++ D+V + ++ +
Sbjct: 371 DVFNDIPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Query: 473 ERAGLVAHAKRLLHELKRP-DNIPR----ETAIMVLARARRVEEATWVFRQAFAAGEVND 527
AGL+ + +++ D +P+ + +L R R++EA V + E N
Sbjct: 427 NHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT--MPMEPN- 483
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYS 587
+ ++G ++ + + EV + + ++ N +L+ N + ++E + S
Sbjct: 484 VVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY-SLLSNIYAAAEDWEGVADIRS 542
Query: 588 QIHDEGCVFP---------DEVH-FQMLSLYGARKD--FTMVESLFEKLDSN 627
++ G P D +H F + + D + M+ SL E D
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIEPPDPG 594
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 187/428 (43%), Gaps = 30/428 (7%)
Query: 165 LAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLI 224
A +FD++ + P + ++ +I + ++ +L M+ VS D + +L+
Sbjct: 71 FARQVFDDLPR----PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 225 ELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC 284
+ L + A++ D+ N +I ++ K + AR + + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----L 182
Query: 285 PD--TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGD 342
P+ VS++ +++ Y N +EAL +FS+M D +++ + L +++G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 343 RLFWSMRKMG--IEPNV-VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
+ S+ KMG IEP++ +S NT+ Y + A LF M+ N++ +N MI
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSP----NLILWNAMI 295
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
+ Y K+ +A ++ EM N ++P+ I+ ++ IS + G L++A +++ + S +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQA 519
D + +I + + G V A+ + D + I+ R EA ++R
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 520 FAAG-EVNDISVFGCMINLYSRNKKYTNVVE----VFEKMREVGYFPDSNVIALVLNAFG 574
G ND++ G ++ ++ +V F +M + P A V++ G
Sbjct: 416 ERGGVHPNDVTFLGLLMAC-----NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 575 KLREFEKA 582
+ ++A
Sbjct: 471 RAGHLDQA 478
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 192/456 (42%), Gaps = 25/456 (5%)
Query: 142 LYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSS 201
L P +F +N ++R R + A ++ M+ ++PD +T+ L+ L
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
F Q+ + D+ + + LI L K A ++F L ++++ ++++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT--IVSWTAIVSA 196
Query: 262 FGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS---EMNDAKC 318
+ + EA + +MR V PD V+ ++L + + + S+ + +M
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
P L + N M Y + V LF M+ PN++ +N ++ Y ++ EAI
Sbjct: 257 PDLLISLNTM---YAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAID 309
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+F M K V+ + ++ + I+ + E+A ++ + + + + + S +I ++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNI 494
K G ++ A ++F + + D V++ MIV Y G A L ++R P+++
Sbjct: 370 KCGSVEGARLVFDRT----LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISV-FGCMINLYSRNKKYTNVVEVFEK 553
+M + V E W F + A ++N + C+I+L R EV +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNR-MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 554 MREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
M P V +L+A K R E + Q+
Sbjct: 485 MP---VQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 179/410 (43%), Gaps = 20/410 (4%)
Query: 180 PDR--YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
P+R +++ +++ + ++G +L QM + +V D V +++ L D +
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 238 SIFARL--KASSIAPDL-IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
SI A + I PDL I+ N+M + K A++L +M+ P+ + ++ ++
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKS----PNLILWNAMI 295
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+ Y N EA+ +F EM + D + I Q+ +E+ ++ + +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
+V + L+ ++ + ++ RL+ + + ++VV ++ MI YG +A +L
Sbjct: 356 DDVFISSALIDMFAKCG----SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+ M+ G+ PN +T+ ++ +G + F ++ + Q Y +I R
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIM-VLARARRVEEATWVFRQAFAAGEVNDISVFGC 533
AG + A ++ + + A++ + R VE + +Q F+ N +
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN-TGHYVQ 530
Query: 534 MINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
+ NLY+ + + V EV +M+E G + +V + G+L F D
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGL--NKDVGCSWVEVRGRLEAFRVGD 578
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 164/351 (46%), Gaps = 15/351 (4%)
Query: 132 ALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGL-FDEMRQRG----LAPDRYTYS 186
++ W K ++ S ++ V+ ++ +A+++ +A L FD +R ++ D T+
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSAD--TFI 177
Query: 187 TLITHFGKHGLLDSSL----FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
LI + + G++ ++ F + +L L L++ K G +A R
Sbjct: 178 VLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLER 237
Query: 243 LKA---SSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVD 299
+ S+ P + +N ++N + +++ ++A L +EM+ V P V+Y TL+ Y
Sbjct: 238 IGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCR 297
Query: 300 NERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVS 359
R A+ V EM A+ ++ N +ID G+ + E + P +V+
Sbjct: 298 MRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVT 357
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
YN+L++ + ++ A + ++M +GV TYN + K + E+ NL ++
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 420 NNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
G P+ +TY I+ + + GKL A + +++++ G+ D +L TM++
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD-LLTTTMLI 467
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 143/291 (49%), Gaps = 9/291 (3%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ PSV +N++L R+++ A L++EM+ + P TY TLI + + + ++
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L++M+ + + ++++ +I+ + G S+A+ + R P ++ YNS++ F
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
KA A +L+ M GV P T +Y+ + + + E ++++ ++ +A D
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 323 TTCNIMIDVY---GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
T ++++ + G+L + + ++ M+ GI+P++++ L+ + E+ EA
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNK---EMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEE 482
Query: 380 FRLMQKKGVQQNVVTYNTMIN---IYGKSLEHEKATNLIQEMQNNGIQPNA 427
F ++G+ +T+ + N G S ++ ++L+ + ++ PN
Sbjct: 483 FDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNT 533
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY------------------ 367
NI+++ + + +++ ++L+ M+ M ++P VV+Y TL+ Y
Sbjct: 254 NILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKM 313
Query: 368 -----------------GESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
GE+ EA+ + +VTYN+++ + K+ +
Sbjct: 314 AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPG 373
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A+ +++ M G+ P TY+ + K K + L+ KL +G D++ Y ++
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 471 AYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVN 526
G ++ A ++ E+K PD + I +L R +EEA F A G +
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 527 DISVFGCMINLYSRNKKYTNVVE 549
F MI+ R+K +++ +
Sbjct: 494 QYITFK-MIDNGLRSKGMSDMAK 515
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 110/240 (45%), Gaps = 7/240 (2%)
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
+V +N ++N + +S + ++A L +EM+ ++P +TY T+I + + ++ A +
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARA 506
++++ + ++I+ +++ +I AG ++ A ++ P + + + +A
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 507 RRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
+ A+ + + G + + +S++ K + ++ K+ E G+ PD
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTY 428
Query: 567 ALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDS 626
L+L + + A + ++ + G + PD + ML R M+E FE+ D+
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRG-IDPDLLTTTMLIHLLCR--LEMLEEAFEEFDN 485
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/518 (19%), Positives = 210/518 (40%), Gaps = 76/518 (14%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+++ +N V+ + + A LF M +R D+ T++++++ F +H + +L +
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
M ++ + +++++ L D +K + + + + S D+ +++++++ K
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+A+ + EM D V VS+++L+ + N VEAL VF M +++ D T
Sbjct: 201 GNVNDAQRVFDEMGDRNV----VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMG-IEPNVVSYNTLLRVYGESELFGEAIHLF---- 380
+I L ++ G + + K + +++ N + +Y + EA +F
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 381 -----------------------RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQE 417
RLM K ++NVV++N +I Y ++ E+E+A +L
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 418 MQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGL 477
++ + P +++ I+ +L G+
Sbjct: 377 LKRESVCPTHYSFANILKACADLAEL------------------------------HLGM 406
Query: 478 VAHAKRLLHELK-----RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFG 532
AH L H K D + I + + VEE VFR+ D +
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME----RDCVSWN 462
Query: 533 CMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDE 592
MI +++N +E+F +M E G PD + VL+A G E+ +S + +
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 522
Query: 593 GCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPN 629
V P H+ M+ L G +S+ E++ P+
Sbjct: 523 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D+ S L AIYV R+V A + S ++ ++ N +ID Y + +E+G ++F
Sbjct: 27 DSCIKSKLSAIYV---RYVHASVIKSGFSN-----EIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
M + N+ ++N+++ + EA LFR M +++ T+N+M++ + +
Sbjct: 79 DKMP----QRNIYTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQH 130
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
E+A M G N ++++++S +++ + + S D +
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 466 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
++ Y + G V A+R+ E+ G+
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEM----------------------------------GDR 216
Query: 526 NDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADAL 585
N +S + +I + +N ++VF+ M E PD +A V++A L + +
Sbjct: 217 NVVS-WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 586 YSQI 589
+ ++
Sbjct: 276 HGRV 279
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 148/335 (44%), Gaps = 3/335 (0%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYT---YS 186
AL+L W ++ Y PS Y V+ + + + + LF+EM Q + + Y+
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
+I + K L+ + ++ ++ D Y+NL+ L G KA I+ ++ +
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
D Y +I K+ A L Q+M++ + P +S+L+ R +
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
+ V+ EM T +ID Y + ++ RL+ M+K G PN Y ++
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ +S A+ +F+ M+K G TY+ ++ ++ S + + A + M N G++P
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+Y +++++ +D A + ++++ G +D
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 153/340 (45%), Gaps = 1/340 (0%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
AYN V++ + +A++ +A F + ++ G D TY+ L+ F GL + + M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
E+ + D Y +I K G A +F ++K + P ++S+++ GKA
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+ + EM+ G P + +L+ Y + AL ++ EM + + ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
I+ + + +E +F M K G P +Y+ LL ++ S A+ ++ M G+
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ + +Y +++ + + A ++ EM+ G + + S ++ I+ K +D A
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD-VCASDVLMIYIKDASVDLALK 543
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
+ + SSG++ + + + + + + GL A+ LL L
Sbjct: 544 WLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETL 583
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 254 AYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
AYN +I KA+ A ++ +++G DT +Y+ L+ ++++ +A ++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELF 373
LD +T ++I + ++ +LF M++ + P+ +++L+ G++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
++ ++ MQ G + + + ++I+ Y K+ + + A L EM+ +G +PN Y+ I
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK---- 489
I K+GKL+ A +F+ + +G Y ++ + +G V A ++ + +
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 490 RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
RP + + +LA R V+ A + + A G D+
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 137/293 (46%), Gaps = 8/293 (2%)
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLT--TCNIMIDVYGQLHMVEEG 341
P Y L FV S+F EM D+ DL+ N +I + +E
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
F ++ G + + +YN L+ ++ L +A ++ M+K + TY +I
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
KS + A L Q+M+ ++P+ +S+++ KAG+LD + ++ +++ G +
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLARARRVEEATWVFR 517
++ ++I +Y +AG + A RL E+K RP+ I A++ ++E A VF+
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 518 QAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD-SNVIALV 569
AG + S + C++ +++ + + + ++++ M G P S+ I+L+
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/320 (17%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 116 FMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
++ L++ A L + E+ L PS ++ ++ ++ +A + + ++ EM+
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKL-RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G P + +LI + K G LD++L +M++ + LY+ +IE K G
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A+++F ++M G P +YS LL
Sbjct: 437 AMTVF-----------------------------------KDMEKAGFLPTPSTYSCLLE 461
Query: 296 IYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
++ + + A+ +++ M +A L++ ++ + +V+ ++ M+ MG
Sbjct: 462 MHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSV 521
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
+V + + L+ +Y + A+ R M G++ N + K+ ++ A L+
Sbjct: 522 DVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLL 580
Query: 416 QEMQNNGIQPNAITYSTIIS 435
+ + ++ + + + Y++I++
Sbjct: 581 ETLVHSAGKVDLVLYTSILA 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 8/217 (3%)
Query: 91 ISSTQNEQELHAVMSLYNQ-RQLSIRFMVSLLSRETDWQRALALLD-----WINEKAL-Y 143
I S L A L+ Q ++ +R S+ S D LD ++ + +
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF 203
PS + ++ + +A + A L+DEM++ G P+ Y+ +I K G L+ ++
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
+ ME+ YS L+E+ G A+ I+ + + + P L +Y S++ +
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
+L A +L EM+ G D V S +L IY+ +
Sbjct: 500 NKRLVDVAGKILLEMKAMGYSVD-VCASDVLMIYIKD 535
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 164/346 (47%), Gaps = 23/346 (6%)
Query: 160 AKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLF----WLQQMEQDNVSG 215
K+ + G F M+ L P ++S + G H L+++ L+++ + SG
Sbjct: 7 VKRIPVYGGSFISMKHMMLVPADLSWSC--SFSGMHSLINTGEEDEEELLKKIVNHSESG 64
Query: 216 DLVL----YSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK------- 264
++ Y+NL+E + G+ S A + L+ +I + + +++ G+
Sbjct: 65 SKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLS 124
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
++FRE +L + + C Y L +++ + S+ E++++ P L
Sbjct: 125 CRVFREVLILPGKEPLSSDC-----YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIV 179
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
N +I + + +++ + M++ +P+V++YN++L + G + L E + + M+
Sbjct: 180 MNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
Query: 385 KK-GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+ V N++TYNT++N K+ + + EM GI+P+ ++Y+ +I ++G +
Sbjct: 240 EDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNV 299
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
+ LF +++ ++ +Y+ +I +++G A +L ELK
Sbjct: 300 KESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ +L R L +L + E S ++ YN VL + +A ++ + +++EM Q
Sbjct: 218 VLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQC 277
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G+ PD +Y+ +I G+ G + SL +M+Q + + +Y LI+ +K GD+ A
Sbjct: 278 GIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
Query: 237 ISIFARLKASS 247
+ + LK +S
Sbjct: 338 LQLSDELKNTS 348
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 207/485 (42%), Gaps = 40/485 (8%)
Query: 102 AVMSLYNQRQLSIRF----MVSLLSRETDWQRALALLDWINE----KALYSPSVFAYNVV 153
AV L + Q IR + SLL + D ++L WI+ P+ N +
Sbjct: 30 AVSRLESLTQQGIRLPFDLLASLLQQCGD-TKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 154 LRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNV 213
+ ++ + A +FD+M R L Y+++ +++ + K G+L + M +
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNL----YSWNNMVSGYVKSGMLVRARVVFDSMPER-- 142
Query: 214 SGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL 273
D+V ++ ++ + G+ +A+ + + S I + ++ ++ K++ + R
Sbjct: 143 --DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
++ G + V +++ Y + A F EM D+ +I Y
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYA 256
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+L +E ++LF M E N VS+ L+ Y A+ LFR M GV+
Sbjct: 257 KLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 394 TYNTMINIYGK--SLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ 451
T+++ + SL H K + M ++PNAI S++I ++ K+G L+ + +F
Sbjct: 313 TFSSCLCASASIASLRHGKEIH--GYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF- 369
Query: 452 KLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR--- 508
R + D V + TMI A + GL A R+L ++ + P T ++V+ A
Sbjct: 370 --RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSG 427
Query: 509 -VEEA-TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVI 566
VEE W G V D + C+I+L R + E+ K+ E+ + PD ++
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIEEMPFEPDKHIW 484
Query: 567 ALVLN 571
+L
Sbjct: 485 NAILG 489
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 142/343 (41%), Gaps = 48/343 (13%)
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PDTVS 289
+ S+A+S L I S++ G K ++ + + + ++ G P+T+
Sbjct: 25 AELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLL 84
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
+ L+ +Y+ KC + C V+ Q+H+
Sbjct: 85 SNHLIGMYM------------------KCGKPIDACK----VFDQMHL------------ 110
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
N+ S+N ++ Y +S + A +F M +++VV++NTM+ Y +
Sbjct: 111 -----RNLYSWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLH 161
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
+A +E + +GI+ N +++ +++ K+ +L ++ +G + VL ++I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
AY + G + AKR E+ D T I A+ +E A +F + E N +S
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCE---MPEKNPVS 278
Query: 530 VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
+ +I Y R +++F KM +G P+ + L A
Sbjct: 279 -WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 184/446 (41%), Gaps = 61/446 (13%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
S + YN+++ + R + LF +++++G D T+S + + G L+ ++ +
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
++ME S DLV S+L+ K G + + ++ ++ P+++ +N+ +
Sbjct: 453 EEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV------ 506
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAI--YVDNERFVEALSVFSEMNDAKCPLDLT 323
EA L + +D P S + L I V +E + S M D D
Sbjct: 507 ----EASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMED-----DPW 557
Query: 324 TCNIMIDVYGQL-HMVEEGDRLFWSMRKMGIEPNVVSY-----NTLLRVYGESELFGEAI 377
+ + +D QL H + LF R +E S+ NT L +Y A
Sbjct: 558 SSSPYMD---QLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLAC 614
Query: 378 HLFRLMQKKGVQQ-NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
LF + GV TYN+M++ + K + A ++ +M N + TY+ II
Sbjct: 615 KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
K G+ D A+ + +L G +D V+Y T+I A
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINA------------------------- 709
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
L +A R++EAT +F + G D+ + MI + S+ K + + M +
Sbjct: 710 ------LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKA 582
G P+ +V +L+ GK E EKA
Sbjct: 764 AGCLPN-HVTDTILDYLGK--EMEKA 786
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 170/367 (46%), Gaps = 24/367 (6%)
Query: 152 VVLRNVLRAKQWHLAHGLFDEMRQRG--LAPDRYTYSTLITHFGKHGL-LDSSLFWLQQM 208
++L +++R+ ++ A G+ D M + G L P Y S LI KH L L S+ +
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYD-SVLIALVKKHELRLALSILFKLLE 190
Query: 209 EQDNVSGD-------------LVLYSNLIELSRKLGDYSKAISIFARLKA-SSIAPDLIA 254
DN S D V + L+ R+ S+ +F +LK D +
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWS 250
Query: 255 YNSMINVFGKAKLFREARLLLQEMRD------NGVCPDTVSYSTLLAIYVDNERFVEALS 308
YN I+ FG A L +EM++ + PD +Y++L+ + + +AL
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
V+ E+ + D +T I+I + + +++ R++ M+ G P+ + YN LL
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
++ EA LF M ++GV+ + TYN +I+ ++ E L +++ G +AI
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
T+S + + GKL+ A L +++ + G +D V ++++ + + G ++L+ +
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Query: 489 KRPDNIP 495
+ + +P
Sbjct: 491 REGNLVP 497
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 2/200 (1%)
Query: 118 VSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRG 177
+S+ + D A L + N + + + YN ++ + ++ + A G+ D+M +
Sbjct: 601 LSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENF 660
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
A D TY+ +I GK G D + L ++ + D+V+Y+ LI K +A
Sbjct: 661 CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEAT 720
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL--LA 295
+F +K++ I PD+++YN+MI V KA +EA L+ M D G P+ V+ + L L
Sbjct: 721 QLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLG 780
Query: 296 IYVDNERFVEALSVFSEMND 315
++ RF +A V ++ N+
Sbjct: 781 KEMEKARFKKASFVRNKPNN 800
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 186/466 (39%), Gaps = 41/466 (8%)
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
YS + + GLL L M++D V+ D + L++ + G + A+ + ++
Sbjct: 95 YSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYME 154
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLL---LQEMRDN------------GVCPDTVS 289
+ Y+S++ K R A + L E DN P TV+
Sbjct: 155 ELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVA 214
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAK-CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
+ LL + E VF ++ K D + NI I +G ++ LF M
Sbjct: 215 VNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEM 274
Query: 349 RK------MGIEPNVVSYNTLLRVYGESELFG---EAIHLFRLMQKKGVQQNVVTYNTMI 399
++ P++ +YN+L+ V LFG +A+ ++ ++ G + + TY +I
Sbjct: 275 KERSSVYGSSFGPDICTYNSLIHVLC---LFGKAKDALIVWDELKVSGHEPDNSTYRILI 331
Query: 400 NIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
KS + A + EMQ NG P+ I Y+ ++ KA K+ A LF+K+ GV+
Sbjct: 332 QGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 460 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRETAIMVLARARRVEEATWV 515
Y +I R G L +LK+ D I + L R ++E A +
Sbjct: 392 ASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKL 451
Query: 516 FRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGK 575
+ G D+ ++ + + ++ ++ + +RE P NV+
Sbjct: 452 VEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP--NVLRWNAGVEAS 509
Query: 576 LREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESL 620
L+ + D Y+ + FP + F ++S+ G+ D E +
Sbjct: 510 LKRPQSKDKDYTPM------FPSKGSFLDIMSMVGSEDDGASAEEV 549
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 164/388 (42%), Gaps = 34/388 (8%)
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
+L N I+ S+KL + S+ K S+ A Y+ + + L E LL
Sbjct: 63 ILRRNSIDPSKKLDFFRWCYSLRPGYKHSATA-----YSQIFRTVCRTGLLGEVPDLLGS 117
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
M+++GV D LL + + +F AL V M + L+ + + ++ + H
Sbjct: 118 MKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHE 177
Query: 338 VEEGDRLFWSMRK---------------MGIEPNVVSYNTLLRVYGESELFGEAIHLF-R 381
+ + + + + + P V+ N LL +++ E +F +
Sbjct: 178 LRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEK 237
Query: 382 LMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ------NNGIQPNAITYSTIIS 435
L K + + +YN I+ +G + + A +L +EM+ + P+ TY+++I
Sbjct: 238 LKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIH 297
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----P 491
+ GK A +++ +L+ SG + D Y+ +I ++ + A R+ E++ P
Sbjct: 298 VLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVP 357
Query: 492 DNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
D I + +AR+V EA +F + G + +I+ RN + +F
Sbjct: 358 DTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
Query: 552 EKMREVGYFPDS---NVIALVLNAFGKL 576
+++ G F D+ +++ L L GKL
Sbjct: 418 CDLKKKGQFVDAITFSIVGLQLCREGKL 445
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 187 TLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS 246
+L+ + GL+ S+ L N S DL + +I K GD +A ++F R+K+
Sbjct: 344 SLVHMYASSGLIASAQSLL------NESFDLQSCNIIINRYLKNGDLERAETLFERVKS- 396
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
D +++ SMI+ + +A A L Q++ D D V+++ +++ V NE F EA
Sbjct: 397 --LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEA 450
Query: 307 LSVFSEMNDAKC---PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI--EPNVVSYN 361
S+ S+M +C PL+ +T ++++ G +++G + + K +P+++ N
Sbjct: 451 ASLLSDM--VRCGLKPLN-STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
+L+ +Y + +A +F M VQ++ V++N+MI +KA NL +EM ++
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAH 480
G +PN++T+ ++S +G + R LF+ ++ + +Q Y +MI RAG +
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 481 AKRLLHELK-RPDN 493
A+ + L PD+
Sbjct: 624 AEEFISALPFTPDH 637
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/519 (20%), Positives = 231/519 (44%), Gaps = 80/519 (15%)
Query: 112 LSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
+S M++ L + + A+ L D + E+ +V ++N ++ ++R A +FD
Sbjct: 139 VSWTVMLTALCDDGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 172 EMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLG 231
M R D +++ +I + ++ ++ + M + NV V +++++ + G
Sbjct: 194 AMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYG 245
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN--GVCPD--- 286
D +A +F + +I +++ +MI+ F +L+REA +L EM+ + V P+
Sbjct: 246 DVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 287 --TVSYS-----------------------------------TLLAIYVDNERFVEALSV 309
+++Y+ +L+ +Y + A S+
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
+E DL +CNI+I+ Y + +E + LF ++ + + VS+ +++ Y E
Sbjct: 362 LNE------SFDLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLE 412
Query: 370 SELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
+ A LF+ + K + VT+ MI+ ++ +A +L+ +M G++P T
Sbjct: 413 AGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ--VLYQTMIVAYERAGLVAHAKRLLHE 487
YS ++S LD+ + + + D +L +++ Y + G + A + +
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 488 LKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
+ + D + + IM L+ ++A +F++ +G+ + F +++ S + T
Sbjct: 529 MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 548 VEVFEKMREVGYFPDSNV---IALV--LNAFGKLREFEK 581
+E+F+ M+E Y + I+++ L GKL+E E+
Sbjct: 589 LELFKAMKET-YSIQPGIDHYISMIDLLGRAGKLKEAEE 626
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 113/533 (21%), Positives = 210/533 (39%), Gaps = 130/533 (24%)
Query: 152 VVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQD 211
++LR + H H L D++ QRG +++L++ + K G LD + + M +
Sbjct: 48 LILRRLSEGGLVHARH-LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 212 NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREA 271
N+ + N+M+ + K + EA
Sbjct: 107 NI---------------------------------------VTCNAMLTGYVKCRRMNEA 127
Query: 272 RLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN----------------- 314
L +EM N VS++ +L D+ R +A+ +F EM
Sbjct: 128 WTLFREMPKN-----VVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRN 182
Query: 315 ----------DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
DA D+ + N MI Y + +EE LF M E NVV++ ++
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSM- 237
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN--NG 422
VYG +G+ +RL + ++N+V++ MI+ + + + +A L EM+ +
Sbjct: 238 -VYGYCR-YGDVREAYRLFCEM-PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 423 IQPNAITYSTIISIWEKAGKLD-----RAAMLFQKLRSSG---VQIDQVLYQTMIVAYER 474
+ PN T+IS+ G L L ++ S+G V D L ++++ Y
Sbjct: 295 VSPNG---ETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 475 AGLVAHAKRLLHE--------------LKRPDNIPRETAIMVLARARRV-EEATW--VFR 517
+GL+A A+ LL+E LK D E A + R + + ++ +W +
Sbjct: 352 SGLIASAQSLLNESFDLQSCNIIINRYLKNGD---LERAETLFERVKSLHDKVSWTSMID 408
Query: 518 QAFAAGEVN------------DISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNV 565
AG+V+ D + MI+ +N+ + + M G P ++
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 566 IALVLNAFGKLREFEKADALYSQI-HDEGCVFPDEV-HFQMLSLY---GARKD 613
+++L++ G ++ ++ I C PD + ++S+Y GA +D
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/562 (20%), Positives = 246/562 (43%), Gaps = 46/562 (8%)
Query: 64 SPYHRRTRTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSR 123
S Y+ T Q + D LL + Q +++HA + L + S +L+S
Sbjct: 42 SSYYSLTSNNDQSLFHY---FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISV 98
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE-------MRQR 176
+ R LLD N S + + + ++L+A +++HGL++ MRQR
Sbjct: 99 ---YARLGLLLDARNVFETVSLVLLSDLRLWNSILKA---NVSHGLYENALELYRGMRQR 152
Query: 177 GLAPDRYTYSTLIT---HFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDY 233
GL D Y ++ + G+ GL + + Q+ Q + +L + + L+ L K G
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRA---FHTQVIQIGLKENLHVVNELLTLYPKAGRM 209
Query: 234 SKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTL 293
A ++F + + +++N MI F + A + + M+ PD V+++++
Sbjct: 210 GDAYNLFVEMPVR----NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSV 265
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
L+ + +F + L F M + + + V +L + +++ + K G
Sbjct: 266 LSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGF 325
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
E + S N L+ VYG+ +A HLFR ++ KG++ ++N++I + + + ++A +
Sbjct: 326 EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALS 381
Query: 414 LIQEMQN----NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
L E++ ++ N +T++++I G+ D + F++++ S V + V ++
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Query: 470 -VAYERAGLVAHAKRLLH----ELKRPDNIPRETAIM-VLARARRVEEATWVFRQAFAAG 523
+ E L + R +H +NI + A++ + A+ + E + VF A
Sbjct: 442 SICAELPAL--NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFE----AI 495
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
D+ + +I Y + + +F++M G+ PD + VL+A EK
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 584 ALYSQIHDEGCVFPDEVHFQML 605
++ + + P + H+ +
Sbjct: 556 EIFYSMSKRFGLEPQQEHYACI 577
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 212/507 (41%), Gaps = 75/507 (14%)
Query: 141 ALYS---PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGL 197
A YS P+VF+YNV+++ + + H+A LFDE+ Q PD +Y+TLI+ +
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARE 120
Query: 198 LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS 257
+++ ++M + D S LI D K + F S++ +Y+S
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCF------SVSGGFDSYSS 174
Query: 258 MINVF----GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
+ N F K L REA + M + D VS+++++ Y ++ +AL+++ EM
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDE---LRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY---GES 370
+D+ T +++ L + G + + K G N + L+ Y G
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 371 ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE-HEKATNLIQEMQNNGIQPNAIT 429
+ ++ +F+ + + ++V +NTMI+ Y + E E+A ++MQ G +P+ +
Sbjct: 292 DGMYDSEKVFQEI----LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCS 347
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
+ + S SS Q Q+ H L
Sbjct: 348 FVCVTSACSNL--------------SSPSQCKQI----------------------HGLA 371
Query: 490 RPDNIP------RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+IP I + ++ +++A WVF + E+N +S F CMI Y+++
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR---MPELNAVS-FNCMIKGYAQHGH 427
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ 603
T + ++++M + G P+ VL+A + ++ ++ + + + P+ H+
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 604 -MLSLYGARKDFTMVESLFEKLDSNPN 629
M+ L G E + + P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPG 514
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 121/567 (21%), Positives = 242/567 (42%), Gaps = 73/567 (12%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P V+++ +L + A +FD+M +R D ++ +IT + G ++S+
Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPER---DDVAIWNAMITGCKESGYHETSVEL 177
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLG-DYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
++M + V D ++ ++ + D+ K + IA ++ N++I ++
Sbjct: 178 FREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVV--NALITMYF 235
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC-PLDL 322
++ +A L+ +E D V D V+++ ++ +R E+L VF +M +A P DL
Sbjct: 236 NCQVVVDACLVFEET-DVAV-RDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDL 292
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T + V G G ++ K G E + N + +Y E FG A +F
Sbjct: 293 T----FVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI--------- 433
+++K ++VT+NTMI+ Y ++ + A ++ + M G++P+ T+ ++
Sbjct: 349 LEEK----DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDV 404
Query: 434 -----------------------ISIWEKAGKLDRAAMLFQK-LRSSGVQIDQVLYQTMI 469
IS + K G++++A +LF++ LR + + + ++
Sbjct: 405 LEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYH 464
Query: 470 VAYERAGLVAHAKRLLHELK-RPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ GL + L E++ PD T + + + + G+ +
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKET 524
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
+ +IN+YS+ N +EVF +M E +++I+ A+ + E E A Y
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLIS----AYSRHGEGENAVNTYKT 580
Query: 589 IHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGI------ 642
+ DEG V PD F ++ A +VE E +S E H V+ +
Sbjct: 581 MQDEGKVIPDAATFS--AVLSACSHAGLVEEGLEIFNS-----MVEFHGVIRNVDHFSCL 633
Query: 643 ---YERADRLNDASRIMNRMNHKAIGN 666
RA L++A ++ +++ K IG+
Sbjct: 634 VDLLGRAGHLDEAESLV-KISEKTIGS 659
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 178/390 (45%), Gaps = 39/390 (10%)
Query: 87 LLASISSTQNEQELH--AVMSLYNQRQLSIRFMVSLLSRETDWQRALALLDWINEKALYS 144
++ S S ++H A+ + Y + L +++ S D+ A + + + EK L +
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
+N ++ + +AK A ++ M G+ PD +T+ +L+ LD +
Sbjct: 357 -----WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS-----LDLDVLE 406
Query: 205 LQQ--MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMI--- 259
+ Q + + +S + + + LI K G KA +F R S+ +LI++N++I
Sbjct: 407 MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER----SLRKNLISWNAIISGF 462
Query: 260 --NVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
N F L R + LL E+R + PD + STLL+I V + + +
Sbjct: 463 YHNGFPFEGLERFSCLLESEVR---ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG 519
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY---GESELFG 374
+ N +I++Y Q ++ +F M E +VVS+N+L+ Y GE E
Sbjct: 520 QFKETLIGNALINMYSQCGTIQNSLEVFNQMS----EKDVVSWNSLISAYSRHGEGE--- 572
Query: 375 EAIHLFRLMQKKG-VQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAITYST 432
A++ ++ MQ +G V + T++ +++ + E+ + M + +G+ N +S
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC 632
Query: 433 IISIWEKAGKLDRAAMLFQ-KLRSSGVQID 461
++ + +AG LD A L + ++ G ++D
Sbjct: 633 LVDLLGRAGHLDEAESLVKISEKTIGSRVD 662
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
EP+V S+ TLL S G+ + F + K + +V +N MI +S HE +
Sbjct: 120 EPDVYSWTTLLSA---SFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVE 176
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L +EM G++ + ++TI+S+ + G LD + + +G I + +I Y
Sbjct: 177 LFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 474 RAGLVAHAKRLLHE--LKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG----EVND 527
+V A + E + D + I LA +R +E+ VFR+ A ++
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTF 294
Query: 528 ISVFG----------------------------CMINLYSRNKKYTNVVEVFEKMREVGY 559
+SV G + +YS + + +VFE + E
Sbjct: 295 VSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE--- 351
Query: 560 FPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
D +++++ + + + A ++Y ++H G V PDE F L
Sbjct: 352 -KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG-VKPDEFTFGSL 395
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 186/452 (41%), Gaps = 40/452 (8%)
Query: 166 AHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
A +FDEM R D T++T+I + + GL+D + ++M+ NV D ++ N++
Sbjct: 165 ARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMR------ 279
+ G+ +I+ L + + D +++ ++ A AR ++M
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 280 ---------------------DNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
D D V ++T+++ YV+++ EAL VF EM +
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
D+ + +I L ++++ + + G+E + N L+ +Y +
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+F M ++ NVV++++MIN E A +L M+ ++PN +T+ ++
Sbjct: 401 VFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVL--YQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
+G ++ +F + + I L Y M+ + RA L+ A ++ + N+
Sbjct: 457 HSGLVEEGKKIFASM-TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
++M R E + E + M N+Y+R +++ +V + M E
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
F + + + N GK EF D + Q
Sbjct: 576 KNVFKEKGLSRIDQN--GKSHEFLIGDKRHKQ 605
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 207/489 (42%), Gaps = 68/489 (13%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P +N LR++ R+ + + +R G D++++ ++ K S+LF
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKV----SALF- 128
Query: 205 LQQMEQDNVS------GDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
+ ME V+ D + + +++ G + A ++F + D++ +N+M
Sbjct: 129 -EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTM 183
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY--VDNERFVEALSVFSEMNDA 316
I + + L EA L +EM+D+ V PD + +++ N R+ A+ F ND
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 317 KCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEA 376
+ +D ++ +Y ++ F RKM + N+ ++ Y + +A
Sbjct: 244 R--MDTHLLTALVTMYAGAGCMDMAREFF---RKMSVR-NLFVSTAMVSGYSKCGRLDDA 297
Query: 377 IHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISI 436
+F +KK ++V + TMI+ Y +S ++A + +EM +GI+P+ ++ ++IS
Sbjct: 298 QVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 437 WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
G LD+A + + +G++ + + +I Y + G + + + + +PR
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF------EKMPR 407
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ +W MIN S + + ++ + +F +M++
Sbjct: 408 RNVV------------SW-----------------SSMINALSMHGEASDALSLFARMKQ 438
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYG----AR 611
P+ VL E+ +++ + DE + P H+ M+ L+G R
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 612 KDFTMVESL 620
+ ++ES+
Sbjct: 499 EALEVIESM 507
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
++VVT+NTMI Y + ++A L +EM+++ + P+ + I+S + G +
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR 508
+++ L + V++D L ++ Y AG + A+ ++ + + ++ R
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
+++A +F Q E D+ + MI+ Y + + VFE+M G PD +
Sbjct: 294 LDDAQVIFDQT----EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
V++A L +KA ++S IH G ++ ++++Y +FEK+
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 176/374 (47%), Gaps = 30/374 (8%)
Query: 210 QDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFR 269
+ + +L + + LI+L + G +F R+ DLI++NS+I + +
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQPL 330
Query: 270 EARLLLQEMRDNGVCPDTVSYSTLLAIY--VDNERFVEALSVFSEMNDAKCPLDLTTCNI 327
A L QEMR + + PD ++ +L +I + + R ++ F+ + D+T N
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT-LRKGWFLEDITIGNA 389
Query: 328 MIDVYGQLHMVEEGDRLF-WSMRKMGIEPN--VVSYNTLLRVYGESELFGEAIHLFRLMQ 384
++ +Y +L +V+ +F W PN V+S+NT++ Y ++ EAI ++ +M+
Sbjct: 390 VVVMYAKLGLVDSARAVFNWL-------PNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 385 KKG-VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
++G + N T+ +++ ++ + L + NG+ + +++ ++ K G+L
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA----KRLLHELKRPDNIPRETA 499
+ A LF ++ +++ V + T+I + G A K +L E +PD+I T
Sbjct: 503 EDALSLFYQIP----RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 500 IMVLARARRVEEATWVFRQAFAA-GEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ + + V+E W F G + +GCM+++Y R + ++ + M
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---S 615
Query: 559 YFPDSNVIALVLNA 572
PD+++ +L+A
Sbjct: 616 LQPDASIWGALLSA 629
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 187/420 (44%), Gaps = 25/420 (5%)
Query: 83 DMDELLASISSTQNEQELHAVMSLYNQ-RQLSIRFMVSLLSRET---DWQRALALLDWIN 138
DM A IS ++L N R + +VSLLS T D+ R + + +
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 139 EKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHF--GKHG 196
+ L S +F N ++ + +FD M R D +++++I + +
Sbjct: 275 KHGLES-ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQP 329
Query: 197 LLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFA-RLKASSIAPDLIAY 255
L SLF Q+M + D + +L + +LGD S+ L+ D+
Sbjct: 330 LRAISLF--QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
N+++ ++ K L AR + + + D +S++T+++ Y N EA+ +++ M +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 316 -AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
+ + T ++ Q + +G +L + K G+ +V +L +YG+
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+A+ LF + + N V +NT+I +G EKA L +EM + G++P+ IT+ T++
Sbjct: 504 DALSLFYQIPR----VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 435 SIWEKAGKLDRAAMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-RPD 492
S +G +D F+ +++ G+ Y M+ Y RAG + A + + + +PD
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 176/422 (41%), Gaps = 38/422 (9%)
Query: 82 IDMDELLASISSTQNEQELHAVMSLYNQRQLSIRF-MVSLLSRETDWQRALALLDWINEK 140
+D+ EL S+ + + ++ AV+ + L + M+ ++ + A+A++DW+ K
Sbjct: 116 VDVRELAFSLRAAKTADDVDAVLKDKGELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRK 175
Query: 141 -----ALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
+ P++F YN +L + + + A + +M + G+ P+ TY+TL+ + +
Sbjct: 176 KSESGGVIGPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEE 232
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKAS----SIAPD 251
G +L L ++ + + YS + + R++ D A+ F L+ I D
Sbjct: 233 GEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGND 292
Query: 252 L-----------------IAYNSMINVFGKAKLFREARL-LLQEMRDNGVCPDTVSYSTL 293
+ I Y M K + L LL M GV P + L
Sbjct: 293 VGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERL 352
Query: 294 LAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
+ E ++ ++ + + + L+ CN +I + G+ ++ + G
Sbjct: 353 IWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGP 412
Query: 354 EPNVVSY-------NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSL 406
EPN +SY N LL + ++ + L M+ KG++ +N ++ K+
Sbjct: 413 EPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKAS 472
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQ 466
E A + + M +NG +P I+Y ++S EK D A ++ + G++ + Y
Sbjct: 473 ETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYT 532
Query: 467 TM 468
TM
Sbjct: 533 TM 534
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 147/338 (43%), Gaps = 12/338 (3%)
Query: 149 AYNVVLRNVLRAKQWHL-AHGLFDEMRQRGLAPDRYTYSTLITHFGK--HGLLDSSLFWL 205
Y V+ R +++ W L + M G+ P R + LI + H ++ L+
Sbjct: 312 CYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELY-- 369
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY-------NSM 258
+++ + L + ++LI L K + A+ I+ L P+ ++Y N +
Sbjct: 370 KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 429
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
++ K ++R LL +M D G+ P ++ +L A+ +F M D
Sbjct: 430 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 489
Query: 319 PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIH 378
+ + ++ + + +E R++ M K+GIEPN+ +Y T+ V + F
Sbjct: 490 KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 549
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
L + M KG++ +VVT+N +I+ ++ A M++ ++PN ITY +I
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
K A L K ++ G+++ Y ++ + E G
Sbjct: 610 NDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 155/407 (38%), Gaps = 55/407 (13%)
Query: 124 ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQ----RGLA 179
E ++ +AL +LD EK + P+ Y+ L R + A F E+R+ R +
Sbjct: 232 EGEFLKALGILDLTKEKG-FEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIG 290
Query: 180 PD-----RYTYSTLITHFGK-------------HGLLDSSLFWLQQMEQDNVSGDLVLYS 221
D + + L G+ L L M+ V +
Sbjct: 291 NDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHE 350
Query: 222 NLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDN 281
LI + Y ++ R++ L N +I + GKAK + A + +++ D
Sbjct: 351 RLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDE 410
Query: 282 GVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEG 341
G P+ +SY +++ + NI++ + + G
Sbjct: 411 GPEPNNLSYELVVSHF----------------------------NILLSAASKRGIWRWG 442
Query: 342 DRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINI 401
RL M G++P +N +L ++ AI +F+ M G + V++Y +++
Sbjct: 443 VRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSA 502
Query: 402 YGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID 461
K +++A + M GI+PN Y+T+ S+ K + L +++ S G++
Sbjct: 503 LEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPS 562
Query: 462 QVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLA 504
V + +I R GL A H +K P+ I E I LA
Sbjct: 563 VVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD-LTTCNIMI--DVYGQ 334
++D G P V + ++ + ++R A++V + K + N+ I + G
Sbjct: 138 LKDKGELPLQV-FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGA 196
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
+ E +++ M + GI PN+V+YNTL+ +Y E F +A+ + L ++KG + N +T
Sbjct: 197 MRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPIT 256
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQ---PNAITYSTIISIWEKAGKLDRAAMLFQ 451
Y+T + +Y + + A E++ + N + Y WE F
Sbjct: 257 YSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYD-----WE---------FEFV 302
Query: 452 KLRSSGVQIDQVLYQTMIVAYERAGLVAH---AKRLLHELK-------RPDNIPRETAIM 501
KL + I ++ YQ M R LV R+L L RP E I
Sbjct: 303 KLENF---IGRICYQVM-----RRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIW 354
Query: 502 VLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFP 561
R ++++ +SV +I L + KK+ +E++E + + G P
Sbjct: 355 ACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEP 414
Query: 562 DSNVIALVLNAF 573
++ LV++ F
Sbjct: 415 NNLSYELVVSHF 426
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 117 MVSLLSRETDWQRALALL-DWINEKA-----LYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
++ L+ + W AL + D ++E Y V +N++L + W L
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKL 230
++M +GL P R ++ ++ K +++ + M + ++ Y L+ K
Sbjct: 447 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 506
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
Y +A ++ + I P+L AY +M +V + F LL+EM G+ P V++
Sbjct: 507 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 566
Query: 291 STLLA 295
+ +++
Sbjct: 567 NAVIS 571
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 189/395 (47%), Gaps = 29/395 (7%)
Query: 167 HGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIEL 226
HGLF + GL D + +TL+ +G+ G + + L +M D V +++L+
Sbjct: 163 HGLF---IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSA 215
Query: 227 SRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
+ G +A ++F ++ ++ ++N MI+ + A L +EA+ E+ D+ D
Sbjct: 216 YLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAK----EVFDSMPVRD 267
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
VS++ ++ Y + E L VF++M +D+ D T ++ L + +G+ +
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS 405
+ K GIE L+ +Y + +A+ +FR K+ +V T+N++I+
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVH 383
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVL- 464
+ A + EM G +PN IT+ ++S G LD+A LF+ + SS +++ +
Sbjct: 384 GLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE-MMSSVYRVEPTIE 442
Query: 465 -YQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRETAIMVLARARRVEEATWVFRQAFAA 522
Y M+ R G + A+ L++E+ + +I E+ + R ++E+A + +
Sbjct: 443 HYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLL-- 500
Query: 523 GEVN--DISVFGCMINLYSRNKKYTNVVEVFEKMR 555
E+N D S + M NLY+ + ++ V++ MR
Sbjct: 501 -ELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 189/483 (39%), Gaps = 87/483 (18%)
Query: 179 APDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAIS 238
+P+ +T++++I + + +L ++M V D ++ +++ + +
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 239 IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYV 298
I S + D+ N+++NV+G++ F AR +L M D VS+++LL+ Y+
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLSAYL 217
Query: 299 DNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVV 358
+ +V+E LF M E NV
Sbjct: 218 EK-----------------------------------GLVDEARALFDEME----ERNVE 238
Query: 359 SYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM 418
S+N ++ Y + L EA +F M + +VV++N M+ Y + + + +M
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 419 QNNGIQ-PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGL 477
++ + P+ T +++S G L + + + G++I+ L ++ Y + G
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG- 353
Query: 478 VAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
++++A VFR A D+S + +I+
Sbjct: 354 ------------------------------KIDKALEVFR----ATSKRDVSTWNSIISD 379
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
S + + +E+F +M G+ P+ VL+A + ++A L+ + V P
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 598 DEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIM 656
H+ M+ L G E L ++ P L + G +R +L A RI
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEI---PADEASILLESLLGACKRFGQLEQAERIA 496
Query: 657 NRM 659
NR+
Sbjct: 497 NRL 499
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 129/331 (38%), Gaps = 45/331 (13%)
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
+AK E + M G+ DT S S L+A N S +N P T
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
N +I Y E +F M + P+ S+ +L+ F E + L
Sbjct: 108 H-NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
K G+ +V NT++N+YG+S E A ++ M +A+++++++S + + G +
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLEKGLV 222
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVL 503
D A LF ++ V+ + MI Y AGLV AK + D++P
Sbjct: 223 DEARALFDEMEERNVES----WNFMISGYAAAGLVKEAKEVF------DSMP-------- 264
Query: 504 ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM-REVGYFPD 562
V D+ + M+ Y+ Y V+EVF KM + PD
Sbjct: 265 ---------------------VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPD 303
Query: 563 SNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+ VL+A L + + ++ I G
Sbjct: 304 GFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 146/340 (42%), Gaps = 9/340 (2%)
Query: 247 SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
+ PD + + ++ K R L N V D+ +L+ +Y + A
Sbjct: 121 GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHA 180
Query: 307 LSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
VF E D + N++I+ Y + + LF SM E N S++TL++
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP----ERNSGSWSTLIKG 236
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
Y +S A LF LM +K NVV++ T+IN + ++ ++E A + EM G++PN
Sbjct: 237 YVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
T + ++S K+G L + + +G+++D+ + ++ Y + G + A +
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 487 ELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTN 546
+ D + I A R +A FRQ +GE D VF ++ + +
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 547 VVEVFEKMR-EVGYFPDSNVIALVLNAFGKLREFEKADAL 585
+ F+ MR + P LV++ G+ + +A L
Sbjct: 413 GLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 22/312 (7%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
S+ +NV++ RAK H+A LF M +R + ++STLI + G L+ +
Sbjct: 195 SILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLF 250
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
+ M + NV V ++ LI + GDY AIS + + + P+ ++++ K+
Sbjct: 251 ELMPEKNV----VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKS 306
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
+ + DNG+ D + L+ +Y A +VFS MN D+ +
Sbjct: 307 GALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSW 362
Query: 326 NIMID---VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
MI V+G+ H + + F M G +P+ V + +L S ++ F
Sbjct: 363 TAMIQGWAVHGRFH---QAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 383 MQ-KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAG 441
M+ ++ + Y ++++ G++ + +A L++ M I P+ T++ + +
Sbjct: 420 MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRACKAHK 476
Query: 442 KLDRAAMLFQKL 453
RA + Q L
Sbjct: 477 GYRRAESVSQNL 488
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 129 RALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTL 188
RA L + + EK +V ++ ++ + + A + EM ++GL P+ YT + +
Sbjct: 245 RAKQLFELMPEK-----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 189 ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSI 248
++ K G L S + + + + D + + L+++ K G+ A ++F+ +
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK-- 357
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
D++++ +MI + F +A ++M +G PD V + +L +++ L+
Sbjct: 358 --DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 309 VFSEMN-DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
F M D L +++D+ G+ + E L + M I P++ ++ L R
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL---VENMPINPDLTTWAALYRA 471
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 168/384 (43%), Gaps = 46/384 (11%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI----------THFGK 194
P V N VLR ++ + L+ EM +RG++PDRYT++ ++ F
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 195 HGLLDSSLFWLQQMEQDNV------SGDLVLYSNLIELSRK---------LGDYSKAISI 239
HG + F L + ++ + GDL + S L + S K Y+K I
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 240 FARLKASSIAP--DLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY 297
++ P D +A+N MI K K AR L + D V+++ +++ Y
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK----DVVTWNAMISGY 250
Query: 298 VDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL-FWSMRKMGIEPN 356
V+ EAL +F EM DA D+ T ++ L +E G RL + + + +
Sbjct: 251 VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 357 VVS----YNTLLRVYGESELFGEAIHLFRLMQKKGVQ-QNVVTYNTMINIYGKSLEH-EK 410
+ +N L+ +Y + AI +FR GV+ +++ T+NT+ I G +L H E
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFR-----GVKDRDLSTWNTL--IVGLALHHAEG 363
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS-GVQIDQVLYQTMI 469
+ + +EMQ + PN +T+ +I +G++D F +R ++ + Y M+
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 470 VAYERAGLVAHAKRLLHELKRPDN 493
RAG + A + +K N
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPN 447
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 158/373 (42%), Gaps = 62/373 (16%)
Query: 129 RALALLDWINEKALYSPSV----FAYNVVLRNVL-----RAKQWHLAHGLFDEMRQRGLA 179
+A + L+W + + V F N ++N L +A LFD+ +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK---- 175
Query: 180 PDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISI 239
+ +S++ + + K G +D ++ +M D V ++ +I K + A +
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSAREL 231
Query: 240 FARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL---AI 296
F R D++ +N+MI+ + +EA + +EMRD G PD V+ +LL A+
Sbjct: 232 FDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 297 YVDNER-------FVEALSVFSEMND------------AKCP--------------LDLT 323
D E +E SV S + AKC DL+
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T N +I V LH E +F M+++ + PN V++ ++ S E F LM
Sbjct: 348 TWNTLI-VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 384 QKK-GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+ ++ N+ Y M+++ G++ + E+A ++ M+ I+PNAI + T++ + G
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLGACKIYGN 463
Query: 443 LDRAAMLFQKLRS 455
++ +KL S
Sbjct: 464 VELGKYANEKLLS 476
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 111 QLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
Q++ M++ + + A L D EK V +N ++ + A G+F
Sbjct: 209 QVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNAMISGYVNCGYPKEALGIF 263
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSS-LFWLQQMEQDNVSGDLV----LYSNLIE 225
EMR G PD T +L++ G L++ + +E +VS + +++ LI+
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARL-LLQEMRDNGVC 284
+ K G +AI +F +K DL +N++I G A E + + +EM+ V
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDR----DLSTWNTLI--VGLALHHAEGSIEMFEEMQRLKVW 377
Query: 285 PDTVSYSTLLAIYVDNERFVEALSVFSEMNDA-KCPLDLTTCNIMIDVYGQLHMVEEGDR 343
P+ V++ ++ + R E FS M D ++ M+D+ G+ +EE
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA-- 435
Query: 344 LFWSMRKMGIEPNVVSYNTLL---RVYGESEL 372
F + M IEPN + + TLL ++YG EL
Sbjct: 436 -FMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 8/236 (3%)
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+P+V N +LR +S + + L+ M+K+GV + T+ ++ K
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
++ +G N + +I G L A+ LF + +V + +M Y
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFD----DSAKAHKVAWSSMTSGYA 189
Query: 474 RAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGC 533
+ G + A RL E+ D + I + + ++ A R+ F D+ +
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA----RELFDRFTEKDVVTWNA 245
Query: 534 MINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQI 589
MI+ Y + +F++MR+ G PD I +L+A L + E L+ I
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/566 (20%), Positives = 223/566 (39%), Gaps = 61/566 (10%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+VF N ++ R + A +FDEM D +++++I + K G +L
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 206 QQMEQD-NVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+M + D + N++ LG +S + S + ++ N +++++ K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ EA + M D VS++ ++A Y RF +A+ +F +M + K +D+ T
Sbjct: 277 CGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE--SELFGEAIHLFRL 382
+ I Y Q + E + M GI+PN V+ ++L + + G+ IH + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 383 -----MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
++K G + N +I++Y K + + A + + + + +T++ +I +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGY 450
Query: 438 EKAGKLDRAAMLFQKL-------RSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+ G ++A L ++ R + I L +A R G HA L ++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 491 PDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
I + A+ + +A VF A EV S ++ Y + + +
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS----LMTGYGMHGYGEEALGI 566
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML-SLYG 609
F++MR +G+ D + +VL A ++ ++++ V P H+ L L G
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 610 ARKDFTMVESLFEKLDSNPNI-------------NKKEL------------------HLV 638
L E++ P K EL + +
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 639 VSGIYERADRLNDASRIMNRMNHKAI 664
+S +Y A R D +RI + M HK +
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGV 712
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 185/414 (44%), Gaps = 36/414 (8%)
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQ-----DNVSGDLVLYSNLIELSRKLGDYSKAI 237
Y +++LI +G +G + L+ M DN + V + S + G+ + A+
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY 297
S+ + ++ N+++ ++ + + +AR + EM D VS+++++ Y
Sbjct: 153 SL-----VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESY 203
Query: 298 VDNERFVEALSVFSEM-NDAKC-PLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEP 355
+ AL +FS M N+ C P ++T N++ L G +L +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC-ASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 356 NVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLI 415
N+ N L+ +Y + + EA +F M K +VV++N M+ Y + E A L
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 416 QEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERA 475
++MQ I+ + +T+S IS + + G A + +++ SSG++ ++V +++
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 476 GLVAHAKRL-LHELKRP----------DNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
G + H K + + +K P +N+ I + A+ ++V+ A +F + + E
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF-DSLSPKE 437
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMRE--VGYFPDSNVIALVLNAFGKL 576
D+ + MI YS++ +E+ +M E P++ I+ L A L
Sbjct: 438 -RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 152/348 (43%), Gaps = 3/348 (0%)
Query: 131 LALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLIT 190
L W+ ++ Y + AYN+ ++ K + LF EMR++G + T++ +I
Sbjct: 662 LRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIM 721
Query: 191 HFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE-LSRKLG-DYSKAISIFARLKASSI 248
+G+ GL + ++ ++M+ + + LI L K G + +A F + S
Sbjct: 722 QYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGF 781
Query: 249 APDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALS 308
PD + + ++A+ L + G P TV+YS + + EALS
Sbjct: 782 VPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALS 840
Query: 309 VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+ + LD T ++ Q +++ SM+++G +P V Y +L+ +
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
+ + + + + M+ + + +VVTY MI Y + E+A N + M+ G P+
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAG 476
TYS I+ +A K + A L ++ G+ + ++T+ R G
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N M+ + G+ ++ D L M K G + ++ ++ L+ VYG+++ G+ + +F M+K
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRK 252
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
G + + YN MI + + A +EM GI TY ++ K+ K+D
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD- 311
Query: 446 AAMLFQKLRSSGVQIDQV----LYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRE 497
+ Q + V+I ++ + ++ ++ +G + A L+ ELK D E
Sbjct: 312 ---VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFE 368
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
+ L RA R+ +A + +++D +V+G +I+ Y R + +E FE +++
Sbjct: 369 ILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 558 GYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEV 600
G P + ++ KL++FEK L++++ + G + PD V
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENG-IEPDSV 469
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 159/382 (41%), Gaps = 36/382 (9%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
A+ +W+ +K +S V YN +L A+ + L EM + G D T++ LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVS------------------GDLVL--YSNLIELSRK 229
+ +GK + L ++M + GDL L Y ++E
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 230 LG--DYSKAISIFARLK----ASSIAPDLI---------AYNSMINVFGKAKLFREARLL 274
G Y + A+ + SIA D++ A+ ++ F + +EA L
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 275 LQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQ 334
++E+++ +C D + L+ R V+AL + M K D I+I Y +
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLR 410
Query: 335 LHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVT 394
+ V + F ++K G P V +Y +++ + + F + +LF M + G++ + V
Sbjct: 411 QNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 395 YNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLR 454
++ + +A + M+ GI+P +YS + ++ + D +F ++
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMH 530
Query: 455 SSGVQIDQVLYQTMIVAYERAG 476
+S + I ++ +I + E+ G
Sbjct: 531 ASKIVIRDDIFSWVISSMEKNG 552
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFR-LMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
EP +V N L R + L A+ F + QK G V YNTM++I G++ +
Sbjct: 154 EPEIVE-NVLKRCFKVPHL---AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVD 209
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
L+ EM+ NG + T++ +IS++ KA K+ + ++F+K+R SG ++D Y MI +
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 473 ERAGLVAHAKRLLHE-LKRPDNIPRETAIMVL---ARARRVEEATWVFRQAFAAGEVNDI 528
AG A E +++ T M+L A++ +V+ + E+++
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMR 555
FG ++ + + K +E+ +++
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELK 356
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 163/392 (41%), Gaps = 66/392 (16%)
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y+T+L+I + + SEM C D+ T I+I VYG+ + +G +F MR
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 350 KMGIEPNVVSYNTLLR---VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKS- 405
K G E + +YN ++R + G +L A+ ++ M +KG+ + TY +++ KS
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDL---ALEFYKEMMEKGITFGLRTYKMLLDCIAKSE 308
Query: 406 ------------------LEHE----------------KATNLIQEMQNNGIQPNAITYS 431
EH+ +A LI+E++N + +A +
Sbjct: 309 KVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFE 368
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK-- 489
++ +A ++ A + ++ + D +Y +I Y R V+ A +K
Sbjct: 369 ILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 490 -RPDNIPRETAIMV-LARARRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTN 546
RP + T IM L + ++ E+ +F + G E + +++ + +N+
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR-VAE 486
Query: 547 VVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLS 606
+VF M E G P ++ + + +++ +++Q+H V D++
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI------ 540
Query: 607 LYGARKDFTMVESLFEKLDSNPNINKKELHLV 638
F+ V S EK N K+++HL+
Sbjct: 541 -------FSWVISSMEK-----NGEKEKIHLI 560
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 212/507 (41%), Gaps = 64/507 (12%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
A+ +L++ + + A L E++ + + D + L+ + + +L + M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
++ + D +Y +I + D SKA+ F +K S P + Y ++ K K F
Sbjct: 391 KRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
+ L EM +NG+ PD+V+ + ++A ++ R EA VFS M + + +I
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 329 IDVYGQLHMVEEGDRLFWSMR--KMGIEPNVVSYN-TLLRVYGESELFGEAIHLFRLMQK 385
+ + +E ++F M K+ I ++ S+ + + GE E IHL + +QK
Sbjct: 510 VKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEK----EKIHLIKEIQK 565
Query: 386 KGVQQNVVTYNTMINIYGK---SLEHEKAT--NLIQEMQNNGIQP--NAITYSTIISI-- 436
+ +Y +N GK S E E N Q +Q + + P +A+ + I
Sbjct: 566 RS-----NSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICR 620
Query: 437 -------WEKAGK-LDRAAMLF------QKLRSSGVQIDQVL-----------YQTMIVA 471
WE+ + L+++ + F + LR + +Q + VL Y+ A
Sbjct: 621 VLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEA 680
Query: 472 YERAGLVAHAKR-------LLHELKRPDN-IPRET-AIMVL--ARARRVEEATWVFRQAF 520
Y + VA + L +E++R I ++T AIM++ R A F++
Sbjct: 681 YNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMK 740
Query: 521 AAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV---GYFPDSNVIALVLNAFGKLR 577
G + S F C+I + KK NV E RE+ G+ PD ++ L ++
Sbjct: 741 DMGLIPSSSTFKCLITVLC-EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVG 799
Query: 578 EFEKADALYSQIHDEGCVFPDEVHFQM 604
+ A + + G FP V + +
Sbjct: 800 NTKDAKSCLDSLGKIG--FPVTVAYSI 824
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 135/341 (39%), Gaps = 9/341 (2%)
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
+ NG ++ +Y+ + + + F + S+F EM C + T IMI YG+ +
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL--FGEAIHLFRLMQKKGVQQNVVTYN 396
R F M+ MG+ P+ ++ L+ V E + EA FR M + G +
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 397 TMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSS 456
+ + + A + + + G P + YS I + GKL+ A
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGE 848
Query: 457 GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR----ETAIMVLARARRVEEA 512
+DQ Y +++ + G + A ++ +K P + I+ + +++E+
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 513 TWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
++ + + MI Y K F M E G PD + +N
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 573 FGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKD 613
+ + E A L S++ D+G + P ++F+ + YG ++
Sbjct: 969 LCQACKSEDALKLLSEMLDKG-IAPSTINFRTV-FYGLNRE 1007
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 118/298 (39%), Gaps = 7/298 (2%)
Query: 232 DYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYS 291
D+ + S+F ++ + MI +G+ L A +EM+D G+ P + ++
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 292 TLLAIYVDNE--RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
L+ + + + EA F EM + D + ++ ++ S+
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLG 812
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
K+G P V+Y+ +R EA+ + + + TY ++++ + + +
Sbjct: 813 KIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
KA + + M+ G +P Y+++I + K +L++ QK+ + V Y MI
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 470 VAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
Y G V A ++ PD I L +A + E+A + + G
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 200/449 (44%), Gaps = 19/449 (4%)
Query: 136 WINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKH 195
+++ + L +F++ ++ ++ R+ + +F EM+ +G+ PD S LI GK
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
L+ + + + S D + ++L+ + K S A +F R+ S + A+
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI---SEEGNKEAW 401
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
N+M+ +GK K + L +++++ G+ D+ S +++++ + S+ +
Sbjct: 402 NTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVK 461
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
L ++ N +ID+YG++ + R+F + NV+++N ++ Y E +
Sbjct: 462 TSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-----ADTNVITWNAMIASYVHCEQSEK 516
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
AI LF M + + + +T T++ + E+ + + + + N + +I
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
++ K G L+++ LF +G Q D V + MI Y G V A L +++ D P
Sbjct: 577 MYAKCGHLEKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKP 632
Query: 496 RETAIMVL----ARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
+ L A VE+ +F + ++ + C+++L SR+ N+ E
Sbjct: 633 TGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSG---NLEEAE 689
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFE 580
+ + + PD + +L++ EFE
Sbjct: 690 STVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/492 (18%), Positives = 190/492 (38%), Gaps = 89/492 (18%)
Query: 177 GLAPDRYTYSTLITHFGKHGL--LDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
GL+ + + S LI+ + +G L S +F L D+ L++++I+ GDY+
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR------DIFLWNSIIKAHFSNGDYA 107
Query: 235 KAISIFARLKASSIAPD-------------LIAYN-----------------------SM 258
+++ F + S +PD L+ ++ S
Sbjct: 108 RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASF 167
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
+ + K ++A L+ EM D D V+++ +++ +V N L +M+ A
Sbjct: 168 VYFYSKCGFLQDACLVFDEMPDR----DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 319 PLDLT---TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
+D T L ++EG L K G+ + +++ Y +S E
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS 435
A FR + +++ ++ ++I +S + E++ ++ EMQN G+ P+ + S +I+
Sbjct: 284 AYLSFRELG----DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN 339
Query: 436 IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 495
K + + + +D + +++ Y + L++ A++L + N
Sbjct: 340 ELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN-- 397
Query: 496 RETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMR 555
+EA + M+ Y + K + +E+F K++
Sbjct: 398 --------------KEA------------------WNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 556 EVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFT 615
+G DS V+++ + +L+ + V ++ LYG D T
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT 485
Query: 616 MVESLFEKLDSN 627
+ +F + D+N
Sbjct: 486 VAWRMFCEADTN 497
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 18/286 (6%)
Query: 147 VFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQ 206
V +N ++ + + +Q A LFD M P T TL+ G L+ +
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 207 QMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAK 266
+ + +L L + LI++ K G K+ +F + D + +N MI+ +G
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGNQKDAVCWNVMISGYGMHG 613
Query: 267 LFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCN 326
A L +M ++ V P ++ LL+ + +F +M+ +L +
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYS 673
Query: 327 IMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR---VYGESELFGEAIHLFRLM 383
++D+ + +EE + SM P+ V + TLL +GE E+ R+
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMG------IRMA 724
Query: 384 QKKGVQ--QNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNA 427
++ QN Y + N+Y + + E+A + M+ +G+ A
Sbjct: 725 ERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRA 770
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 196/420 (46%), Gaps = 22/420 (5%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYS-TLITHFGKHGLLDSSLF 203
P+ F++ L R L + ++ + GL LI +GK G +D ++
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
Q ME+ D V ++ ++ + G + F ++ PD + YN +I+ F
Sbjct: 214 VFQHMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFV 265
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K+ F A +L +M + P++ S++T+L YV++E+ EA F++M+ + D
Sbjct: 266 KSGDFNNAFQVLSDMPN----PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEY 321
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+ +I++ L +V G + K+G++ VV + L+ +Y + + A +F M
Sbjct: 322 SLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTM 381
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-QNNGIQPNAITYSTIISIWEKAGK 442
+K N++ +N MI+ Y ++ + +A L ++ Q ++P+ T+ ++++
Sbjct: 382 PRK----NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV 437
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQ--TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
+ + ++ + +I + ++I A + G V AK+++ E + A+
Sbjct: 438 PMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Query: 501 MVLARARR-VEEATWVFRQAFAAGEVN-DISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+ AR+ ++ A V + G+ + D ++ M NLY+ ++++ V ++ + MRE G
Sbjct: 498 LGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESG 557
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 188/457 (41%), Gaps = 59/457 (12%)
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
PD+I++NS+++ + ++ F+E L E+ + V P+ S++ LA +
Sbjct: 119 PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACI 178
Query: 310 FSEMNDAKCPLD---LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV 366
S++ K L+ + N +ID+YG+ +++ +F M E + VS+N ++
Sbjct: 179 HSKL--VKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME----EKDTVSWNAIVAS 232
Query: 367 YGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPN 426
+ + F M + VTYN +I+ + KS + A ++ +M N PN
Sbjct: 233 CSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PN 284
Query: 427 AITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQ------------------------ 462
+ +++TI++ + + K A F K+ SSGV+ D+
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA 344
Query: 463 -----------VLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEE 511
V+ +I Y + G++ HA+ + + R + I I AR E
Sbjct: 345 CAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIE 404
Query: 512 ATWVFRQAFAAGEVN-DISVFGCMINLYSRNKKYTNV-VEVFEKM-REVGYFPDSNVIAL 568
A +F Q + D F ++ + S + V + FE M E P
Sbjct: 405 AIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCS 464
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDSNP 628
++ A G+ E +A + I + G + +L ARKD +++ K+
Sbjct: 465 LIRAMGQRGEVWQAKQV---IQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELG 521
Query: 629 NINKKE-LHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ +K E L++V+S +Y +R + +I M +
Sbjct: 522 DADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGV 558
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 48/234 (20%)
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
N ++ Y +E+ ++F M +P+V+S+N+L+ Y +S F E I LF + +
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMP----DPDVISWNSLVSGYVQSGRFQEGICLFLELHR 149
Query: 386 KGV------------------------------------QQNVVTYNTMINIYGKSLEHE 409
V + NVV N +I++YGK +
Sbjct: 150 SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMD 209
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
A + Q M+ + + ++++ I++ + GKL+ F ++ + D V Y +I
Sbjct: 210 DAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP----DTVTYNELI 261
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
A+ ++G +A ++L ++ P++ T + + + EAT F + ++G
Sbjct: 262 DAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 204/473 (43%), Gaps = 72/473 (15%)
Query: 148 FAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
F++N ++ + ++ A LF++M +R + ++S +IT F ++G +DS++ ++
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLI-AYNSMINVFGKAK 266
M + S L + LI+ + +L + + + + L + DL+ AYN++I +G+
Sbjct: 193 MPVKDSSPLCALVAGLIK-NERLSEAAWVLGQYGSLVSGR--EDLVYAYNTLIVGYGQRG 249
Query: 267 LFREARLLLQEMRD-----------NGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
AR L ++ D C + VS+++++ Y+ V A +F +M D
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD 309
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN--VVSYNTLLRVYGESELF 373
D + N MID Y + +E+ LF M PN S+N ++ Y
Sbjct: 310 R----DTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDAHSWNMMVSGYASVGNV 359
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
A H F +K +++ V++N++I Y K+ ++++A +L M G +P+ T +++
Sbjct: 360 ELARHYF----EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSL 415
Query: 434 ISIWEKAGKLD-RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD 492
+S G ++ R M ++ V D ++ +I Y R G + ++R+ E+K
Sbjct: 416 LS--ASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK--- 470
Query: 493 NIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFE 552
+ RE TW MI Y+ + + + +F
Sbjct: 471 -LKREVI-------------TW-----------------NAMIGGYAFHGNASEALNLFG 499
Query: 553 KMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
M+ G +P VLNA ++A A + + + P H+ L
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 43/393 (10%)
Query: 251 DLIAYNSMINVF---GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEAL 307
D++ +N+MI+ + G + EAR L EM D+ S++T+++ Y N R EAL
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEAL 156
Query: 308 SVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY 367
+F +M + + + + MI + Q V+ LF RKM ++ + L+
Sbjct: 157 LLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLF---RKMPVK-DSSPLCALVAGL 208
Query: 368 GESELFGEAIHLFRLMQK--KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEM-----QN 420
++E EA + G + V YNT+I YG+ + E A L ++ +
Sbjct: 209 IKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDD 268
Query: 421 NGIQ------PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
+G + N ++++++I + K G + A +LF +++ D + + TMI Y
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVH 324
Query: 475 AGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
+ A L E+ D + A VE A R F + +
Sbjct: 325 VSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELA----RHYFEKTPEKHTVSWNSI 380
Query: 535 INLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD--E 592
I Y +NK Y V++F +M G PD + + +L+A L L Q+H
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR----LGMQMHQIVV 436
Query: 593 GCVFPD-EVHFQMLSLYGARKDFTMVESLFEKL 624
V PD VH ++++Y + +F+++
Sbjct: 437 KTVIPDVPVHNALITMYSRCGEIMESRRIFDEM 469
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 189/414 (45%), Gaps = 35/414 (8%)
Query: 159 RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV 218
R H + G+F MR+R D +++T+I+ F ++GL D L + +M++ D +
Sbjct: 365 RCGSVHKSFGVFLSMRER----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNS-MINVFGKAKLFREARLLLQE 277
+ L+ + L + A L I + NS +I+++ K+ L R ++ L +
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSGLIRISQKLFE- 477
Query: 278 MRDNGVCP-DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLH 336
+G D +++++++ Y N + VF +M + + T ++ Q+
Sbjct: 478 --GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 337 MVEEGDRLF-WSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
V+ G +L +S+R+ ++ NV + L+ +Y ++ A +F Q K ++N VTY
Sbjct: 536 SVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFS--QTK--ERNSVTY 590
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
TMI YG+ E+A +L MQ +GI+P+AIT+ ++S +G +D +F+++R
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 456 S-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV--------LARA 506
+Q Y + R G V A + L NI ++ L A
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 507 RRVEEATWVFRQA--FAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
V E F + F+ EV + N+Y+ +K+ +V +V MRE G
Sbjct: 711 ETVSERLAKFDKGKNFSGYEV-------LLSNMYAEEQKWKSVDKVRRGMREKG 757
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 69/350 (19%)
Query: 252 LIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFS 311
++ NS++ ++ + ++ + MR+ D VS++T+++ +V N E L +
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRER----DVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 312 EMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE-PNVVSYNTLLRVYGES 370
EM +D T ++ L E G + + + GI+ + SY L+ +Y +S
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKS 466
Query: 371 ELFGEAIHLFRLMQKKG-VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAIT 429
L + LF + G +++ T+N+MI+ Y ++ EK + ++M I+PNA+T
Sbjct: 467 GLIRISQKLF---EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 430 YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA------YERAGLVAHAKR 483
++I+ + G +D L G I Q L Q + VA Y +AG + +A+
Sbjct: 524 VASILPACSQIGSVDLGKQL------HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAED 577
Query: 484 LLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + K +++ T MI Y ++
Sbjct: 578 MFSQTKERNSVTYTT-----------------------------------MILGYGQHGM 602
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+ +F M+E G PD+ VL+A YS + DEG
Sbjct: 603 GERAISLFLSMQESGIKPDAITFVAVLSA-----------CSYSGLIDEG 641
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/545 (19%), Positives = 228/545 (41%), Gaps = 46/545 (8%)
Query: 137 INEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHG 196
+N L +PS+ YN +L+++ K + LF E+R +GL PD +T ++ G+
Sbjct: 1 MNMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGR-- 58
Query: 197 LLDSSLFWLQQMEQDNVSG---------DLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
+ +E + V G D + ++L+ + LG +F +
Sbjct: 59 -------LRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR- 110
Query: 248 IAPDLIAYNSMINVFGKAKLFREARLLLQEMR-------DNGVCPDTVSYSTLLAIYVDN 300
D++++N +I+ + F +A + + M D G T+S + L
Sbjct: 111 ---DVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSY 360
ER + EM+ + N ++D++ + +++ +F SMR + NV +
Sbjct: 168 ERIYRFVVTEFEMS-------VRIGNALVDMFCKCGCLDKARAVFDSMR----DKNVKCW 216
Query: 361 NTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
+++ Y + EA R++ ++ ++VV + M+N Y + ++A L + MQ
Sbjct: 217 TSMVFGYVSTGRIDEA----RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAH 480
GI+P+ ++++ + G L++ + + + V +D+V+ ++ Y + G +
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 481 AKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSR 540
A + +E+K D + I LA A ++ + G D F ++ +
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNH 392
Query: 541 NKKYTNVVEVFEKMREV-GYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDE 599
++F M E P S + +++ + ++A+ L ++ E
Sbjct: 393 GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Query: 600 VHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRM 659
V+ +LS + + E + EKL+ ++ H +++ +Y A+R D + + +M
Sbjct: 453 VYCSLLSAARNYGNVKIAERVAEKLE-KVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 511
Query: 660 NHKAI 664
I
Sbjct: 512 KDLGI 516
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 176/383 (45%), Gaps = 15/383 (3%)
Query: 178 LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
L PD + +S L+ G +D + D V+ S+L+++ K G + A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY 297
++F ++ + I++ +M++ + K+ EA L + + + S++ L++ +
Sbjct: 161 AVFDSIRVK----NTISWTAMVSGYAKSGRKEEALELFRILP----VKNLYSWTALISGF 212
Query: 298 VDNERFVEALSVFSEMNDAKCP-LDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
V + + +EA SVF+EM + LD + ++ L G ++ + +G +
Sbjct: 213 VQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC 272
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
V N L+ +Y + A +F M+ ++VV++ ++I + + EKA L
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMR----HRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL-RSSGVQIDQVLYQTMIVAYERA 475
+M ++G++PN +T+ +I G +++ LFQ + + G++ Y ++ R+
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 476 GLVAHAKRLLHELKRPDNIPRETAIM-VLARARRVEEATWVFRQAFAAGEVNDISVFGCM 534
GL+ A+ L+H + P + P A++ R R + + ++ ++ D S + +
Sbjct: 389 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 535 INLYSRNKKYTNVVEVFEKMREV 557
N+Y+ + V E K+ E+
Sbjct: 449 SNIYASASLWGKVSEARRKLGEM 471
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 26/285 (9%)
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG--VQQNVVTYNTMINIYGKSLE 407
K+GI NTL+ VYG+ A+ +F M + +V+T N+ GK+L
Sbjct: 31 KLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLS 90
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
+ ++ P+ +S ++ G +D + S D+V+ +
Sbjct: 91 VFSSVGSSSGLR-----PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSS 145
Query: 468 MIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVND 527
++ Y + GL+ AK + ++ + I + A++ R EEA +FR V +
Sbjct: 146 LVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL----PVKN 201
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKM-REVGYFPDSNVIALVLNAFGKLREFEKADALY 586
+ + +I+ + ++ K VF +M RE D V++ ++ A L A
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANL----AASIAG 257
Query: 587 SQIHD-------EGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
Q+H + CVF + ++ +Y D + +F ++
Sbjct: 258 RQVHGLVIALGFDSCVF---ISNALIDMYAKCSDVIAAKDIFSRM 299
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS-YSTLLAIYVD-NE 301
K P Y MIN FG+AK++ E +++ ++ C + + L+ IY +
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
R A+ + M D C + N ++++ + +E ++F S K+G+E + N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 362 TLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
L++ ES A+ L ++ + NV+T++ +I + + E+A L++ M+
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHA 481
I+P+ IT++ +IS K G+++ L ++++ G + + YQ ++ A
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 482 KRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEV 525
K ++ ++ RP + + ++ L + V E WV RQ G V
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 274 LLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYG 333
+L M D G P + S++ +L + V + F E +F +D NI+I
Sbjct: 154 ILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLC 213
Query: 334 QLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVV 393
+ +E +L + PNV++++ L+R + F EA L M+K+ ++ + +
Sbjct: 214 ESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTI 273
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII-SIWEKAGKLDRAAMLFQK 452
T+N +I+ K E+ +L++ M+ G +PN TY ++ + +K L+ M+ Q
Sbjct: 274 TFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496
+ S G++ + Y+ M++ V +L ++ +P+
Sbjct: 334 I-SWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
N++++ + + A L DE Q+ P+ T+S LI F G + + L++ME+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
+ + D + ++ LI RK G + I + R+K P+ Y ++ K E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
A+ ++ +M G+ P +SY ++ + + VE V +M
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 39/299 (13%)
Query: 174 RQRGLAPDRYTYSTLITHFGKHGLLDS--SLFWLQQMEQDNVSGDLVLYSNLIELSRKL- 230
+++ P Y+ +I FG+ + D + ++E+ + Y NL+ + L
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFY-NLMRIYGNLA 145
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE-------------------- 270
G ++AI I + P ++N ++N+ AKLF E
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 271 ---------------ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
A LL E P+ +++S L+ + + +F EA + M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 316 AKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGE 375
+ D T NI+I + VEEG L M+ G EPN +Y +L + + E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 376 AIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
A + M G++ + ++Y M+ ++ + ++++M N+G P + + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 141/321 (43%)
Query: 175 QRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYS 234
+ + PD + S +I K +D ++ L + Q+ + ++Y+N+IE K G
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
+++ + +K + + P N + + F A LL++MR G P + L+
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 295 AIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIE 354
+N R V+A ++ + ID + V+ G LF + G
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 355 PNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNL 414
P+V++Y+ L++ ++ EA LF M KG++ V TYN+MI+ + K E ++ +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 415 IQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYER 474
I M + P+ ITY+++I +G+ A + +++ +++ + +I +
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 475 AGLVAHAKRLLHELKRPDNIP 495
G A E++ + P
Sbjct: 732 CGWSGEALVYFREMEEKEMEP 752
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 101/500 (20%), Positives = 208/500 (41%), Gaps = 69/500 (13%)
Query: 111 QLSIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQ-WHLAHGL 169
+L+ + + ++L+ W A +W +++ Y ++AYN + + RA+Q L +
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALV 129
Query: 170 FDEMRQRG-LAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
D + R ++P + + I G GL+D
Sbjct: 130 VDVLNSRCFMSPGAFGF--FIRCLGNAGLVD----------------------------- 158
Query: 229 KLGDYSKAISIFARLKASSIA-PDLIAYNSMINVFGKAKL----FREARLLLQEMRDNGV 283
+A S+F R++ + P+ YN ++ K+ EAR L+EMRD G
Sbjct: 159 ------EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEAR--LKEMRDCGF 210
Query: 284 CPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDR 343
D + + +L +Y + + ALSVF+E+ ++ LD I++ + + V++
Sbjct: 211 HFDKFTLTPVLQVYCNTGKSERALSVFNEIL-SRGWLDEHISTILVVSFCKWGQVDKAFE 269
Query: 344 LFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYG 403
L + + I N +Y L+ + + +A LF M++ G+ ++ Y+ +I
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 404 KSLEHEKATNLIQEMQNNGIQPN-AITYSTIISIWEKA----------GKLDRAA--MLF 450
K + E A +L E++ +GI P+ I + S E++ G +D+ + +L+
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLY 389
Query: 451 QKLRSSGVQIDQV-----LYQTMIVAYERAGLVAHAKRLLHELKR---PDNIPRETAIMV 502
+ L ++ D V Q ++ YE G V+ +LL + + PD+ I
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMGNYESDG-VSEIVKLLKDHNKAILPDSDSLSIVINC 448
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
L +A +V+ A + G + ++ +I + + +++ +M++ G P
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 563 SNVIALVLNAFGKLREFEKA 582
+ + + +F A
Sbjct: 509 QFTLNCIYGCLAERCDFVGA 528
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%)
Query: 143 YSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSL 202
+ P V AY+V+++ + +A + A LF+EM +GL P TY+++I + K G +D L
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+ +M +D + D++ Y++LI G S+AI + +K P+ I + ++I
Sbjct: 670 SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM 313
K EA + +EM + + PD+ Y +L++ ++ +E +F EM
Sbjct: 730 CKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 112/537 (20%), Positives = 221/537 (41%), Gaps = 35/537 (6%)
Query: 88 LASISST--QNEQELHAVMSLYNQRQL----SIRFMVSLLSRETDWQRALALLDWINEKA 141
+ASI S QN V+ + N R + F + L A ++ D + E
Sbjct: 112 MASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMG 171
Query: 142 LYSPSVFAYNVVLRNVLRA--KQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD 199
L P+ + YN +L + ++ L EMR G D++T + ++ + G +
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 200 SSLFWLQQMEQDNVSGDLVLYSNLIELS-RKLGDYSKAISIFARLKASSIAPDLIAYNSM 258
+L ++ + + S ++ +S K G KA + L+ I + Y +
Sbjct: 232 RALSVFNEILSRGWLDEHI--STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVL 289
Query: 259 INVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKC 318
I+ F K +A L ++MR G+ D Y L+ ++ ALS++ E+ +
Sbjct: 290 IHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Query: 319 PLDLTTCNIMIDVY---GQLHMVEE---GD-------RLFWSMRKMGIEPNVV--SYNTL 363
P D ++ + +L + E GD L+ S+ + I ++V +Y+ +
Sbjct: 350 PPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFI 409
Query: 364 LRVYG--ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNN 421
+ G ES+ E + L + K + + + + +IN K+ + + A L+ ++ N
Sbjct: 410 QNLMGNYESDGVSEIVKLLK-DHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN 468
Query: 422 GIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY-ERAGLVAH 480
G+ P + Y+ II K G+ + + L +++ +GV+ Q + ER V
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVG- 527
Query: 481 AKRLLHELKRPDNIP--RETAIMV--LARARRVEEATWVFRQAFAAGEVNDISVFGCMIN 536
A LL +++ P + T +V L R +A G + + I+
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 537 LYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
+N+ +E+F + G+ PD +++ A K +AD L++++ +G
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/502 (18%), Positives = 199/502 (39%), Gaps = 31/502 (6%)
Query: 128 QRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYST 187
+RAL++ + I + + VV + + Q A L + + +R + + TY
Sbjct: 231 ERALSVFNEILSRGWLDEHISTILVV--SFCKWGQVDKAFELIEMLEERDIRLNYKTYCV 288
Query: 188 LITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASS 247
LI F K +D + ++M + ++ D+ LY LI K D A+S++ +K S
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 248 IAPDLIAYNSMINVFG-KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEA 306
I PD ++ F +++L R +++ ++ V + Y +L ++ N+ EA
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEA 405
Query: 307 LS-------------------VFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWS 347
S + + N A P D + +I+I+ + + V+ L
Sbjct: 406 YSFIQNLMGNYESDGVSEIVKLLKDHNKAILP-DSDSLSIVINCLVKANKVDMAVTLLHD 464
Query: 348 MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLE 407
+ + G+ P + YN ++ + E++ L M+ GV+ + T N + + +
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
A +L+++M+ G +P + ++ + G+ A + G V
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 468 MIVAYERAGLVAHAKRLLHEL----KRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
I + V L ++ PD I I L +A R EA +F + + G
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKAD 583
++ + MI+ + + + + +M E PD +++ +A
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 584 ALYSQIHDEGCVFPDEVHFQML 605
++++ + C +P+ + F L
Sbjct: 705 FRWNEMKGKDC-YPNRITFMAL 725
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 7/321 (2%)
Query: 113 SIRFMVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDE 172
S+ +++ L + A+ LL I + L P YN ++ + + + + L E
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 173 MRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGD 232
M+ G+ P ++T + + + +L L++M G + L +KL +
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR---FYGFEPWIKHTTFLVKKLCE 556
Query: 233 YSKAISIFARLK---ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVS 289
+A+ L ++A + I+ K + L +++ NG CPD ++
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 290 YSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR 349
Y L+ R +EA +F+EM + T N MID + + ++ G M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 350 KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHE 409
+ P+V++Y +L+ S EAI + M+ K N +T+ +I K
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 410 KATNLIQEMQNNGIQPNAITY 430
+A +EM+ ++P++ Y
Sbjct: 737 EALVYFREMEEKEMEPDSAVY 757
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 142/323 (43%), Gaps = 7/323 (2%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++ + +E + +L LL + + + PS F N + + + A L +MR
Sbjct: 480 IIEGMCKEGRSEESLKLLGEMKDAGV-EPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G P + L+ ++G + +L + + G +V + I+ K +
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
+ +F + A+ PD+IAY+ +I KA EA +L EM G+ P +Y++++
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 297 YVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF-WS-MRKMGI 353
+ LS M D K P +T ++ ++G + +F W+ M+
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSL---IHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
PN +++ L++ + GEA+ FR M++K ++ + Y ++++ + S
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 414 LIQEMQNNGIQPNAITYSTIISI 436
+ +EM + G P ++ + ++++
Sbjct: 776 IFREMVHKGRFPVSVDRNYMLAV 798
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 118/507 (23%), Positives = 207/507 (40%), Gaps = 86/507 (16%)
Query: 178 LAPDRYT--YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE-LSRKLGDYS 234
L+P+ T T++ F + GL + LF+ +Q+ D+ Y+ + LSR + S
Sbjct: 67 LSPELNTKVVETVLNGFKRWGL--AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNAS 124
Query: 235 -KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVC-PDTVSYST 292
KA+ + ++P A+ I G A L EA + +R+ G+C P+ +Y+
Sbjct: 125 LKALVVDVLNSRCFMSPG--AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 293 LL-AIYVDNERFVEALSV-FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
LL AI N VE + EM D D T ++ VY
Sbjct: 183 LLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY------------------ 224
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG-VQQNVVTYNTMINIYGKSLEHE 409
NT G+SE A+ +F + +G + +++ T ++ + K + +
Sbjct: 225 ---------CNT-----GKSE---RALSVFNEILSRGWLDEHIST--ILVVSFCKWGQVD 265
Query: 410 KATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMI 469
KA LI+ ++ I+ N TY +I + K ++D+A LF+K+R G+ D LY +I
Sbjct: 266 KAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Query: 470 VAYERAGLVAH-----AKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGE 524
GL H A L E+KR IP + I+ EE+ G+
Sbjct: 326 -----GGLCKHKDLEMALSLYLEIKR-SGIPPDRGILGKLLCSFSEESELSRITEVIIGD 379
Query: 525 VNDISVFGCMINLYS-------------------RNKKYTNVVEVFEKMRE--VGYFPDS 563
++ SV +L+ N + V E+ + +++ PDS
Sbjct: 380 IDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 564 NVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVES---L 620
+ +++V+N K + + A L I G + P + + + + G K+ ES L
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNG-LIPGPMMYNNI-IEGMCKEGRSEESLKLL 497
Query: 621 FEKLDSNPNINKKELHLVVSGIYERAD 647
E D+ ++ L+ + + ER D
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCD 524
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 184 TYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARL 243
TY +L+ + K L + + L +M++ N++ + Y++L+ L K G+ K ++ L
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 244 KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM-RDNGVCPDTVSYSTLLAIYVDNER 302
KA ++ PD YN + +++EM RD V PD +YS + +IYVD
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 303 FVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNT 362
+A E+ D T +I +YG+L + E R++ S+R + + V+Y
Sbjct: 245 SQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLN 304
Query: 363 LLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
+++V + A LF+ Q ++ N +I Y + +KA L ++ G
Sbjct: 305 MIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRG 364
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
+ NA T+ + + K+G + RA K S G
Sbjct: 365 GKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIG 399
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
+ Y S++N + K L +A LL +M++ + P ++SY++L+ +Y + ++ E
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG-IEPNVVSYNTLLRVYGESE 371
+ D T N+ + + + +R+ M + G + P+ +Y+ + +Y ++
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 372 LFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYS 431
L +A + ++ K Q++ Y +I +YG+ + + + + ++ + + + Y
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYL 303
Query: 432 TIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 490
+I + K L A LF++ +++ D + +I AY + GL+ A L + R
Sbjct: 304 NMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPR 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 96/202 (47%), Gaps = 7/202 (3%)
Query: 393 VTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQK 452
+TY +++N Y K L EKA L+ +M+ I P++++Y+++++++ K G+ ++ + Q+
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 453 LRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKR-----PDNIPRETAIMVLARAR 507
L++ V D Y + A ++ +R++ E+ R PD + A
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
++A ++ D + + +I LY R K T V ++ +R + SNV
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR-LAIPKTSNVAY 302
Query: 568 L-VLNAFGKLREFEKADALYSQ 588
L ++ KL + A+ L+ +
Sbjct: 303 LNMIQVLVKLNDLPGAETLFKE 324
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 235 KAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLL 294
KA + ++K +I P ++YNS++ ++ K + ++QE++ V PD+ +Y+ +
Sbjct: 141 KAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWM 200
Query: 295 AIYVDNERFVEALSVFSEMN-DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGI 353
V EMN D + D TT + M +Y + ++ ++ +
Sbjct: 201 RALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNT 260
Query: 354 EPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATN 413
+ + +Y L+ +YG E ++R ++ + + V Y MI + K + A
Sbjct: 261 QRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAET 320
Query: 414 LIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYE 473
L +E Q N + + +I + + G + +A L +K G +++ ++ + Y
Sbjct: 321 LFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYV 380
Query: 474 RAGLVAHA 481
++G +A A
Sbjct: 381 KSGDMARA 388
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 120/321 (37%), Gaps = 62/321 (19%)
Query: 358 VSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQE 417
++Y +LL Y + L +A L M++ + + ++YN+++ +Y K+ E EK +IQE
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 418 MQNNGIQPNA------------------------------------ITYSTIISIWEKAG 441
++ + P++ TYS + SI+ AG
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 442 KLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRE 497
+A Q+L Q D YQ +I Y R G + R+ L+ + N+
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYL 303
Query: 498 TAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
I VL + + A +F++ A DI + +I Y++ E+ EK
Sbjct: 304 NMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRR 363
Query: 558 G-------------YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPD-EVHFQ 603
G Y+ S +A L K K D G P E
Sbjct: 364 GGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDG--------GKWLPSPETVRA 415
Query: 604 MLSLYGARKDFTMVESLFEKL 624
++S + +KD E+L E L
Sbjct: 416 LMSYFEQKKDVNGAENLLEIL 436
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/401 (17%), Positives = 167/401 (41%), Gaps = 13/401 (3%)
Query: 71 RTQQQMFLDHSIDMDELLASISSTQNEQELHAVMSLYNQRQLSIRFMVSLLSRETDWQRA 130
R + D +I +D L+A + + ++ +L+ +++ +E ++A
Sbjct: 84 RGMNKTVSDQAIHLD-LVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 142
Query: 131 LALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLIT 190
LL+ + E + +PS +YN ++ + + + E++ + PD YTY+ +
Sbjct: 143 EGLLNKMKELNI-TPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMR 201
Query: 191 HFGKHGLLDSSLFWLQQMEQDN-VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ +++M +D V+ D YSN+ + G KA L+ +
Sbjct: 202 ALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQ 261
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSV 309
D AY +I ++G+ E + + +R V+Y ++ + V A ++
Sbjct: 262 RDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETL 321
Query: 310 FSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGE 369
F E D+ N++I Y Q ++++ + L + G + N ++ + Y +
Sbjct: 322 FKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVK 381
Query: 370 S-------ELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNG 422
S E +A+ + + K + + T +++ + + + A NL++ ++N
Sbjct: 382 SGDMARALECMSKAVSIGKGDGGKWL-PSPETVRALMSYFEQKKDVNGAENLLEILKNGT 440
Query: 423 IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQV 463
A + +I + AGK A + ++L+ V++++
Sbjct: 441 DNIGAEIFEPLIRTYAAAGKSHPA--MRRRLKMENVEVNEA 479
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 186/435 (42%), Gaps = 51/435 (11%)
Query: 158 LRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDL 217
++ + +FDEM++R + T++TLI+ + ++ + D L +M+ + +
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 218 VLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQE 277
++ + + + G + + + + + + + NS+IN++ K R+AR+L +
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 278 MRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHM 337
V V+++++++ Y N +EAL +F M L ++ +I + L
Sbjct: 255 TEVKSV----VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 338 VEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
+ ++L S+ K G + L+ Y + +A+ LF+ + G NVV++
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTA 367
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIIS---------------------- 435
MI+ + ++ E+A +L EM+ G++PN TYS I++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 427
Query: 436 ---------IWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLH 486
+ K GK++ AA +F + D V + M+ Y + G A ++
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 487 ELKRPDNIPRE---TAIMVLARARRVEEATWVFRQAFAAGEVNDIS--VFGCMINLYSRN 541
EL + P E ++I+ + A FA D S V ++ +Y++
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 542 KKYTNVVEVFEKMRE 556
+ EVF++ RE
Sbjct: 544 GNIESAEEVFKRQRE 558
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 188/494 (38%), Gaps = 124/494 (25%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
LF M+ G P+ +T++ + + G+ L + ++ + + + ++LI L
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV----- 283
K G+ KA +F + + S+ + +NSMI+ + L EA + MR N V
Sbjct: 241 KCGNVRKARILFDKTEVKSV----VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 284 --------CPD-------------TVSY---------STLLAIYVDNERFVEALSVFSEM 313
C + V Y + L+ Y ++AL +F E+
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 314 NDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV------- 366
C ++ + MI + Q EE LF M++ G+ PN +Y+ +L
Sbjct: 357 G---CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS 413
Query: 367 ----------YGESELFGEA-----IHLFRLMQKKGV-----QQNVVTYNTMINIYGKSL 406
Y S G A + L ++ + V +++V ++ M+ Y ++
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 407 EHEKATNLIQEMQNNGIQPNAITYSTIISI------------------------------ 436
E E A + E+ GI+PN T+S+I+++
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 437 ------WEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK- 489
+ K G ++ A +F++ R + D V + +MI Y + G A + E+K
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQR----EKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 490 RPDNIPRETAIMVLA---RARRVEEATWVFRQAFAAGEVNDISVF------GCMINLYSR 540
R + T I V A A VEE F V D + CM++LYSR
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM-----VRDCKIAPTKEHNSCMVDLYSR 644
Query: 541 NKKYTNVVEVFEKM 554
+ ++V E M
Sbjct: 645 AGQLEKAMKVIENM 658
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 172/380 (45%), Gaps = 37/380 (9%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL 205
+V ++ ++ L+ A LF EM+++G+ P+ +TYS ++T + S
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVH 416
Query: 206 QQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKA 265
Q+ + N + + L++ KLG +A +F+ + D++A+++M+ + +
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQT 472
Query: 266 KLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
A + E+ G+ P+ ++S++L + + F K LD + C
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA-IKSRLDSSLC 531
Query: 326 --NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
+ ++ +Y + +E + +F R E ++VS+N+++ Y + +A+ +F+ M
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQR----EKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 384 QKKGVQQNVVTYNTMINIY------GKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIW 437
+K+ V+ + VT+ I ++ G E EK +++ +++ I P S ++ ++
Sbjct: 588 KKRKVKMDGVTF---IGVFAACTHAGLVEEGEKYFDIM--VRDCKIAPTKEHNSCMVDLY 642
Query: 438 EKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI--- 494
+AG+L++A + + + + +++T++ A H K L L I
Sbjct: 643 SRAGQLEKAMKVIENMPNPA---GSTIWRTILAACR-----VHKKTELGRLAAEKIIAMK 694
Query: 495 PRETAIMVLARARRVEEATW 514
P ++A VL E W
Sbjct: 695 PEDSAAYVLLSNMYAESGDW 714
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/504 (18%), Positives = 202/504 (40%), Gaps = 95/504 (18%)
Query: 144 SPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK-HGLLDSSL 202
S S FA V++ K+ L + + G D+ + L+ + K +LD+
Sbjct: 294 SESSFAS--VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA-- 349
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
L+ ++ G++V ++ +I + +A+ +F+ +K + P+ Y+ ++
Sbjct: 350 --LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ + + Q ++ N TV + LL YV + EA VFS ++D D+
Sbjct: 408 ---PVISPSEVHAQVVKTNYERSSTVG-TALLDAYVKLGKVEEAAKVFSGIDDK----DI 459
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRV-------YGESELF-G 374
+ M+ Y Q E ++F + K GI+PN +++++L V G+ + F G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 375 EAIH------------LFRLMQKKG------------VQQNVVTYNTMINIYGKSLEHEK 410
AI L + KKG ++++V++N+MI+ Y + + K
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ-KLRSSGVQIDQVLYQTMI 469
A ++ +EM+ ++ + +T+ + + AG ++ F +R + + M+
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 470 VAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDIS 529
Y RAG + A +++ + P I+ R + E + + A + D +
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 530 VFGCMINLYS-------------------------------RNKKYT------------- 545
+ + N+Y+ +NK Y+
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 546 ---NVVEVFEKMREVGYFPDSNVI 566
+ ++ +++++GY PD++ +
Sbjct: 760 IYMKLEDLSTRLKDLGYEPDTSYV 783
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 146/339 (43%), Gaps = 39/339 (11%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D++ ++D Y + ++G ++F M+ E NVV++ TL+ Y + + E + LF
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
MQ +G Q N T+ + + + + + + NG+ +++I+++ K
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPR 496
G + +A +LF K V V + +MI Y GL A + + ++ R
Sbjct: 243 GNVRKARILFDKTEVKSV----VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298
Query: 497 ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMRE 556
+ I + A + + + G + D ++ ++ YS+ + + +F+++
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 557 VGYFPDSNVIALVLNAFGKLREFEKADA--LYSQIHDEGCVFPDEVHFQMLSLYGARKDF 614
VG NV++ G L+ K +A L+S++ +G V P+E + ++
Sbjct: 359 VG-----NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVI--------- 403
Query: 615 TMVESLFEKLDSNPNINKKELHL-VVSGIYERADRLNDA 652
L + P I+ E+H VV YER+ + A
Sbjct: 404 ---------LTALPVISPSEVHAQVVKTNYERSSTVGTA 433
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/538 (20%), Positives = 207/538 (38%), Gaps = 118/538 (21%)
Query: 130 ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLI 189
+L D + E+ YS +NVV+ +A + +A LF+ M ++ D T ++L+
Sbjct: 112 SLRFFDMMPERDGYS-----WNVVVSGFAKAGELSVARRLFNAMPEK----DVVTLNSLL 162
Query: 190 THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIA 249
+ +G + +L +++ N S D + + +++ +L I A++ +
Sbjct: 163 HGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 250 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERF------ 303
D +S++NV+ K R A +L+++R+ PD S S L++ Y + R
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIRE----PDDHSLSALISGYANCGRVNESRGL 275
Query: 304 -------------------------VEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
+EAL +F+EM + + D T +I+ L +
Sbjct: 276 FDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFL 334
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTM 398
E G ++ K G+ ++V +TLL +Y + EA LF ++ + + N+M
Sbjct: 335 ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE----SYDTILLNSM 390
Query: 399 INIYGKSLEHEKATNLIQEMQN----------NGIQPNAIT------------------- 429
I +Y + A + + ++N NG N T
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDE 450
Query: 430 --YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHE 487
S++IS L+ +F + G+ DQV+ ++I Y + G V H +R+
Sbjct: 451 VSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDT 510
Query: 488 LKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNV 547
+ + D +P + MI+ Y+ N +
Sbjct: 511 MVKSDEVPWNS-----------------------------------MISGYATNGQGFEA 535
Query: 548 VEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQML 605
+++F+KM G P +VL A E+ L+ + + PD+ HF +
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCM 593
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 119/549 (21%), Positives = 222/549 (40%), Gaps = 99/549 (18%)
Query: 110 RQLSIRFMVSLLSR--ETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAH 167
R+ +R + S SR ET W++ LL +K S V N +L+ R+ + +A
Sbjct: 26 RRYYVRLLQSCSSRNRETLWRQTNGLL---LKKGFLSSIVIVANHLLQMYSRSGKMGIAR 82
Query: 168 GLFDEMRQRGLAPDR--YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIE 225
LFDEM PDR ++++T+I + G +SL + M +
Sbjct: 83 NLFDEM------PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE--------------- 121
Query: 226 LSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCP 285
D ++N +++ F KA AR L M +
Sbjct: 122 ------------------------RDGYSWNVVVSGFAKAGELSVARRLFNAMPE----K 153
Query: 286 DTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLF 345
D V+ ++LL Y+ N EAL +F E+N + + LTT ++ +L ++ G ++
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTT---VLKACAELEALKCGKQIH 210
Query: 346 WSMRKMGIEPNVVSYNTLLRVYGE----------------------SELFGEAIHLFRLM 383
+ G+E + ++L+ VY + S L + R+
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 384 QKKGV-----QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
+ +G+ + V+ +N+MI+ Y + +A L EM+N + ++ T + +I+
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACI 329
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRET 498
G L+ + G+ D V+ T++ Y + G A +L E++ D I +
Sbjct: 330 GLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNS 389
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
I V R+++A VF + E + + M N +S+N +E F +M ++
Sbjct: 390 MIKVYFSCGRIDDAKRVFERI----ENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD 445
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLY--------GA 610
D ++ V++A + E + ++++ G V ++ LY G
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 611 RKDFTMVES 619
R TMV+S
Sbjct: 506 RVFDTMVKS 514
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 165/377 (43%), Gaps = 34/377 (9%)
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRL-FWSMRKM 351
LL +Y + + A ++F EM D + + N MI+ G ++ E+G L F+ M
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDR----NYFSWNTMIE--GYMNSGEKGTSLRFFDMMP- 120
Query: 352 GIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKA 411
E + S+N ++ + ++ A LF M +K +VVT N++++ Y + E+A
Sbjct: 121 --ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEK----DVVTLNSLLHGYILNGYAEEA 174
Query: 412 TNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA 471
L +E+ +AIT +T++ + L + ++ GV+ D + +++
Sbjct: 175 LRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 472 YERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVF 531
Y + G + A +L +++ PD+ I A RV E+ R F + ++
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNES----RGLFDRKSNRCVILW 287
Query: 532 GCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHD 591
MI+ Y N + +F +MR DS +A V+NA L E Q+H
Sbjct: 288 NSMISGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVINACIGLGFLETG----KQMHC 342
Query: 592 EGCVFP--DE--VHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERAD 647
C F D+ V +L +Y LF +++S I L + +Y
Sbjct: 343 HACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI----LLNSMIKVYFSCG 398
Query: 648 RLNDASRIMNRMNHKAI 664
R++DA R+ R+ +K++
Sbjct: 399 RIDDAKRVFERIENKSL 415
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 202/469 (43%), Gaps = 66/469 (14%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWL--QQ 207
+NV++ + + + + + M +G+ PD +TY +++ G+ LD + +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE--TLDVAFGRVVHGS 169
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKL 267
+E + L + + LI + ++ + A +F R+ D +++N++IN + +
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM----FERDAVSWNAVINCYASEGM 225
Query: 268 FREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLD------ 321
+ EA L +M +GV ++++ + + +V AL + S M + LD
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 322 -LTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
L C+++ G + + +E L GI+ NV NTL+ +Y + + A+ +F
Sbjct: 286 GLKACSLI----GAIRLGKEIHGLAIHSSYDGID-NV--RNTLITMYSKCKDLRHALIVF 338
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
R + + ++ T+N++I+ Y + + E+A++L++EM G QPN+IT ++I+ + +
Sbjct: 339 RQTE----ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARI 394
Query: 441 GKLDRA----------------AMLFQKL----RSSGVQI------------DQVLYQTM 468
L ML+ L SG + D+V Y ++
Sbjct: 395 ANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSL 454
Query: 469 IVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVF-RQAFAAG 523
I Y G A L E+ R PD++ + + ++ V E +F + G
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYG 514
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNA 572
+ F CM++LY R ++ M Y P A +LNA
Sbjct: 515 IRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---YKPSGATWATLLNA 560
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 184/456 (40%), Gaps = 57/456 (12%)
Query: 253 IAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSE 312
+ +N +I + K +LF E + M G+ PD +Y ++L + V
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 313 MNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESEL 372
+ + L CN +I +Y + + RLF M E + VS+N ++ Y +
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM----FERDAVSWNAVINCYASEGM 225
Query: 373 FGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN--NGIQPNAITY 430
+ EA LF M GV+ +V+T+N + ++ + A LI M+N + P A+
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM-- 283
Query: 431 STIISIWEKAGKLDRAAMLFQKLRSSGVQ-----IDQVLYQTMIVAYERAGLVAHAKRLL 485
II + KA L A L +++ + ID V T+I Y + + HA +
Sbjct: 284 --IIGL--KACSLIGAIRLGKEIHGLAIHSSYDGIDNV-RNTLITMYSKCKDLRHALIVF 338
Query: 486 HELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAG-EVNDISV-------------- 530
+ + + I A+ + EEA+ + R+ AG + N I++
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 531 ----FGCMINLYSRNKKYT----NVVEVFEKMREVGYFP---------DSNVIALVLNAF 573
F C I K YT ++V+V+ K ++ D +++ +
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY 458
Query: 574 GKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMV---ESLFEKLDSNPNI 630
G E A AL+ ++ G + PD H ++++ A +V E LF K+ I
Sbjct: 459 GNQGEGGVALALFKEMTRSG-IKPD--HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGI 515
Query: 631 NKKELHL-VVSGIYERADRLNDASRIMNRMNHKAIG 665
H + +Y RA L A I++ M +K G
Sbjct: 516 RPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSG 551
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
+NS+++V+ K+ A+ + M D V+Y++L+ Y + AL++F EM
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLIDGYGNQGEGGVALALFKEMT 475
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMR-KMGIEPNVVSYNTLLRVYGESELF 373
+ D T ++ +V EG+RLF M+ + GI P + ++ ++ +YG +
Sbjct: 476 RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFL 535
Query: 374 GEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTI 433
+A + M K T +I+G + + A + EM+ N Y I
Sbjct: 536 AKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK----PENPGYYVLI 591
Query: 434 ISIWEKAGKLDRAAMLFQKLRSSGVQID 461
+++ AG + A + +R GV+ D
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 138/293 (47%), Gaps = 6/293 (2%)
Query: 111 QLSIRFMVSLLSRETDWQRALALLDWINEKALYSP--SVFAYNVVLRNVLRAKQWHLAHG 168
++S+ S L +E D +AL + +++ + SP S +A + +R + + +++
Sbjct: 30 KISVSKAKSTLRKEHDPDKALKIYANVSDHSA-SPVSSRYAQELTVRRLAKCRRFSDIET 88
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
L + + + YSTLI +G+ + + ++ +QM+Q V ++ L+
Sbjct: 89 LIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACL 148
Query: 229 KLGDYSKAISIFARL--KASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPD 286
++ K +F + + + I PD I+Y +I + + +A ++++M+ G+
Sbjct: 149 HSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVT 208
Query: 287 TVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFW 346
T++++T+L+ A ++++EM C LD N+ I + Q E L
Sbjct: 209 TIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIE 267
Query: 347 SMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMI 399
M MG++P+ +SYN L+ Y E + EA ++ ++ N T+ T+I
Sbjct: 268 EMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 146/341 (42%), Gaps = 49/341 (14%)
Query: 255 YNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN 314
Y+++I +G+A +F A ++M G VS++ LL + ++ F + +F E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI- 163
Query: 315 DAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFG 374
R I P+ +SY L++ Y +S
Sbjct: 164 --------------------------------PQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 375 EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
+AI + R MQ KG++ + + T+++ K E E A NL EM G + + Y+ I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
+K +R L +++ S G++ D + Y ++ AY G++ AK++ L+ +
Sbjct: 252 MSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 495 PR----ETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEV 550
P T I L +R E+ +F+++ ++ D + ++ NKK + +
Sbjct: 311 PNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGL 370
Query: 551 FEKMREVGYFPDSNVIALVLNAFGKLRE----FEKADALYS 587
+++ FP S LNA+ KL E + K DA S
Sbjct: 371 IRTVKKK--FPPS-----FLNAWKKLEEELGLYSKTDAFPS 404
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 3/243 (1%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR--GLAPDRYTYSTLITHFGKHGLLDSSLF 203
S ++N +L L +K + LFDE+ QR + PD+ +Y LI + G + ++
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
++QM+ + + ++ ++ K G+ A +++ + D AYN I
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQ 255
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLT 323
K R + L++EM G+ PDT+SY+ L+ Y + EA V+ + C +
Sbjct: 256 KESPER-VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
T +I + E+G +F M P+ + L+ E++ +A L R +
Sbjct: 315 TFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTV 374
Query: 384 QKK 386
+KK
Sbjct: 375 KKK 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 111/248 (44%), Gaps = 35/248 (14%)
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQ 419
Y+TL+R YG++ +F A+ F M + G ++ V++N ++N S +K L E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 420 N--NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGL 477
N I P+ I+Y +I + +G ++A + ++++ G+++ + + T++ + + G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG- 223
Query: 478 VAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINL 537
EL+ DN+ E ++ + ++ A + R A E +
Sbjct: 224 ---------ELEVADNLWNE----MVKKGCELDNAAYNVRIMSAQKESPE---------- 260
Query: 538 YSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFP 597
V E+ E+M +G PD+ ++ A+ + ++A +Y + C P
Sbjct: 261 --------RVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA-P 311
Query: 598 DEVHFQML 605
+ F+ L
Sbjct: 312 NAATFRTL 319
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 187/408 (45%), Gaps = 13/408 (3%)
Query: 151 NVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQ 210
NV++ + LA +FD M +R L +++T+I + ++ + +L +M
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLV----SWNTMIGLYTRNRMESEALDIFLEMRN 155
Query: 211 DNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFRE 270
+ S+++ D + + + I +L ++++++ K + ++
Sbjct: 156 EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD 215
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
A + + M+D +V++S+++A YV N+ + EAL ++ + T + +I
Sbjct: 216 AVQVFESMQDK----SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
L + EG ++ + K G NV ++ + +Y + E+ +F +Q+K
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK---- 327
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
N+ +NT+I+ + K ++ L ++MQ +G+ PN +T+S+++S+ G ++ F
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 451 QKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRV 509
+ +R++ G+ + V Y M+ RAGL++ A L+ + +++ R +
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
Query: 510 EEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
E V + E + + N+Y+ NK++ + + + +R+
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDC 495
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/387 (16%), Positives = 167/387 (43%), Gaps = 52/387 (13%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLF 380
D+T N++I+ Y + VE ++F M +E ++VS+NT++ +Y + + EA+ +F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGM----LERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 381 RLMQKKG-----------------------------------VQQNVVTYNTMINIYGKS 405
M+ +G + N+ ++++Y K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLY 465
+ A + + MQ+ +++T+S++++ + + + A +L+++ + ++ +Q
Sbjct: 211 GMIKDAVQVFESMQDK----SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 466 QTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFA 521
++I A + K++ + + + +A+ + A+ + E+ +F +
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV-- 324
Query: 522 AGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEK 581
+ ++ ++ +I+ ++++ + V+ +FEKM++ G P+ + +L+ G E+
Sbjct: 325 --QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 582 ADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVS 640
+ + + P+ VH+ M+ + G + L + + +P + L
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
Query: 641 GIYERADRLNDASRIMNRMNHKAIGNH 667
+Y+ + A+ + + + GNH
Sbjct: 443 RVYKNLELAEVAAEKLFELEPENAGNH 469
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 114/551 (20%), Positives = 221/551 (40%), Gaps = 94/551 (17%)
Query: 121 LSRETDWQRALALLDWINEKALYSPS-----VFAYNVVLRNVLRAKQWHLAHGLFDEMRQ 175
+SR + Q AL L I + +Y P + A V+ V+ K H E +
Sbjct: 22 ISRGSPIQ-ALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLH------SESIK 74
Query: 176 RGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSK 235
G+ D S+LI+ +GK G + S+ +M + NV+ ++ +I GD
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVA----TWNAMIGGYMSNGDAVL 130
Query: 236 AISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLA 295
A +F + S+ + + + MI +GK +AR L + M + ++S +L
Sbjct: 131 ASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLG 185
Query: 296 IYVDNERFVEALSVFSEMNDAKCPL---------------------------DLTTCNIM 328
+YV+N + +A F ++ + + DL N +
Sbjct: 186 VYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 245
Query: 329 IDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
I Y Q ++ F++M+ G EP+ V+ +++L +S + L+ +G+
Sbjct: 246 IAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI 305
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+ N N +I++Y K + E AT++ + + + +++IS GK A
Sbjct: 306 ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CCNSMISCLAIHGKGKEALE 361
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARR 508
+F + S ++ D++ + ++ A G + ++ E+K D P
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKP------------- 408
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
++ FGC+I+L R+ K E + ++E+ P+ V+
Sbjct: 409 ------------------NVKHFGCLIHLLGRSGKLK---EAYRLVKEMHVKPNDTVLGA 447
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFP--DEVHFQMLS-LYGARKDFTMVESL---FE 622
+L A + E A+ + I G + E H +S LY + + E+L E
Sbjct: 448 LLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEME 507
Query: 623 K--LDSNPNIN 631
K L+ +P ++
Sbjct: 508 KRGLEKSPGLS 518
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 177/407 (43%), Gaps = 47/407 (11%)
Query: 271 ARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMID 330
+LL E GVC D + S+L+++Y V A VF EM + ++ T N MI
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIG 120
Query: 331 VYGQLHMVEEGDRLFWS--MRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGV 388
Y + GD + S ++ + N V++ +++ YG+ +A LF M +
Sbjct: 121 GY-----MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE-- 173
Query: 389 QQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAM 448
+NV ++ M+ +Y + + E A +++ + NA +S ++S + + G + A
Sbjct: 174 LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP----EKNAFVWSLMMSGYFRIGDVHEARA 229
Query: 449 LFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAIMVLA 504
+F ++ + D V++ T+I Y + G A ++ PD + + + A
Sbjct: 230 IFYRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 505 RARRVEEATWVFRQAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKM--REVGYFP 561
++ R++ V G E+N V +I++Y++ N VFE + R V
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQF-VSNALIDMYAKCGDLENATSVFESISVRSVACC- 343
Query: 562 DSNVIALVLNAFGK--LREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTM--- 616
+S + L ++ GK L F ++L + PDE+ F + F M
Sbjct: 344 NSMISCLAIHGKGKEALEMFSTMESLDLK--------PDEITFIAVLTACVHGGFLMEGL 395
Query: 617 -VESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRMNHK 662
+ S + D PN+ K ++ + R+ +L +A R++ M+ K
Sbjct: 396 KIFSEMKTQDVKPNV--KHFGCLIH-LLGRSGKLKEAYRLVKEMHVK 439
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 182/442 (41%), Gaps = 78/442 (17%)
Query: 221 SNLIELSRKLGDYSKAIS----IFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQ 276
S L+ L R+ + +K++ + R+ + D++ S+INV+ K AR + +
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 277 EMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMIDVYGQL 335
+ D +++L++ Y N F + L VF + N + C D T +I YG L
Sbjct: 64 NF---DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 336 HMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY 395
G + + K G +VV ++L+ +Y + LF ++ +F M +++V ++
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP----ERDVASW 176
Query: 396 NTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRS 455
NT+I+ + +S E EKA L M+++G +PN+++ + IS + L+R + +K
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 456 SGVQIDQ-------------------------------VLYQTMIVAYERAG----LVAH 480
G ++D+ V + +MI Y G V
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 481 AKRLLHELKRPDNIPRETAIMVLARARRVEEAT----WVFRQA---------------FA 521
R++ E RP + +M +R+R + +V R F
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 522 AGEVN-----------DIS-VFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALV 569
GE N D++ + MI+ Y + VEV+++M VG PD V
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 570 LNAFGKLREFEKADALYSQIHD 591
L A +L EK ++ I +
Sbjct: 417 LPACSQLAALEKGKQIHLSISE 438
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/475 (19%), Positives = 192/475 (40%), Gaps = 42/475 (8%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
++S + + ++AL L + E + + P+ + V + R + + ++
Sbjct: 179 VISCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G D Y S L+ +GK L+ + Q+M + + LV ++++I+ GD
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS----LVAWNSMIKGYVAKGDSKSC 293
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAK------------------------------ 266
+ I R+ P S++ +++
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 267 LFREARLLLQEMRDNGVCPDTV-SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTC 325
F+ L E + D S++ +++ Y+ + +A+ V+ +M D+ T
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 326 NIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQK 385
++ QL +E+G ++ S+ + +E + + + LL +Y + EA +F + K
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 386 KGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDR 445
K +VV++ MI+ YG + +A EMQ G++P+ +T ++S AG +D
Sbjct: 474 K----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 446 AAMLFQKLRSS-GVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLA 504
F ++RS G++ Y MI RAG + A ++ + + + + A
Sbjct: 530 GLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSA 589
Query: 505 RARRVEEATW-VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+E + + +D S + + NLY+ + + V KM+E+G
Sbjct: 590 CCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMG 644
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/502 (18%), Positives = 193/502 (38%), Gaps = 85/502 (16%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P F + V++ + L + + + G D S+L+ + K L ++SL
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+M + +V+ ++ +I + G+ KA+ +F R+++S P+ ++ I+ +
Sbjct: 165 FDEMPERDVAS----WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
+ + ++ G D S L+ +Y + A VF +M L
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK----SLVA 276
Query: 325 CNIMIDVYGQLHMVEEGD-----RLFWSMRKMGIEPNVVSYNTLLRVYGESE--LFGEAI 377
N MI Y V +GD + M G P+ + ++L S L G+ I
Sbjct: 277 WNSMIKGY-----VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 378 H-----------------LFRLMQKKG-----------VQQNVV-TYNTMINIYGKSLEH 408
H L L K G Q++V ++N MI+ Y
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNW 391
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
KA + +M + G++P+ +T+++++ + L++ + + S ++ D++L +
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDI 528
+ Y + G A R+ + + + D + +W
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIPKKDVV------------------SWTV------------ 481
Query: 529 SVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQ 588
MI+ Y + + + F++M++ G PD + VL+A G ++ +SQ
Sbjct: 482 -----MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 589 IHDEGCVFPDEVHFQ-MLSLYG 609
+ + + P H+ M+ + G
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILG 558
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 127/312 (40%), Gaps = 43/312 (13%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQM 208
++NV++ + + W A ++D+M G+ PD T+++++ + L+ +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ + D +L S L+++ K G+ +A IF NS+
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIF---------------NSIPK-------- 473
Query: 269 REARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIM 328
D VS++ +++ Y + + EAL F EM D T +
Sbjct: 474 ----------------KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 329 IDVYGQLHMVEEGDRLFWSMR-KMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKG 387
+ G +++EG + F MR K GIEP + Y+ ++ + G + EA + + Q
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI--IQQTPE 575
Query: 388 VQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
N +T+ + LEH + + + N +A TY + +++ D A
Sbjct: 576 TSDNAELLSTLFSACCLHLEHSLGDRIARLLVEN-YPDDASTYMVLFNLYASGESWDAAR 634
Query: 448 MLFQKLRSSGVQ 459
+ K++ G++
Sbjct: 635 RVRLKMKEMGLR 646
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 387 GVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRA 446
G++++VV ++IN+Y +H A ++ +N I+ + +++++S + K
Sbjct: 34 GLRRDVVLCKSLINVYFTCKDHCSARHV---FENFDIRSDVYIWNSLMSGYSKNSMFHDT 90
Query: 447 AMLFQKLRSSGVQI-DQVLYQTMIVAYERAGLVAHAKRLLHELKRP-----DNIPRETAI 500
+F++L + + + D + +I AY G R++H L D + + +
Sbjct: 91 LEVFKRLLNCSICVPDSFTFPNVIKAYGALGR-EFLGRMIHTLVVKSGYVCDVVVASSLV 149
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
+ A+ E + VF + D++ + +I+ + ++ + +E+F +M G+
Sbjct: 150 GMYAKFNLFENSLQVFDEM----PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESL 620
P+S + + ++A +L E+ ++ + +G + V+ ++ +YG + +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 621 FEKLDSNPNINKKELHLVVSGIYERADRLNDASRIMNRM 659
F+K+ P + + ++ G + D I+NRM
Sbjct: 266 FQKM---PRKSLVAWNSMIKGYVAKGDS-KSCVEILNRM 300
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 204/471 (43%), Gaps = 50/471 (10%)
Query: 129 RALALLDWINEKALYS----PSVFAYNVVLRNVLRAKQWH-LAHGLFDEMRQRGLAPDRY 183
+A+ L D+ L+S P+ +++N ++R + H A L+ M+ GL PD++
Sbjct: 74 KAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKF 133
Query: 184 TYSTL------ITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAI 237
TY+ + + G + SSLF + + D+ + +LI + K G A
Sbjct: 134 TYNFVFIACAKLEEIGVGRSVHSSLF------KVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 238 SIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIY 297
+F + D +++NSMI+ + +A ++A L ++M + G PD + ++L
Sbjct: 188 KLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGAC 243
Query: 298 -----VDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
+ R +E +++ K L + +I +YG+ ++ R+F M
Sbjct: 244 SHLGDLRTGRLLEEMAI-----TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM---- 294
Query: 353 IEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKAT 412
I+ + V++ ++ VY ++ EA LF M+K GV + T +T+++ G E
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 413 NLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAY 472
+ +Q N + ++ ++ K G+++ A +F+ + ++ + MI AY
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAY 410
Query: 473 ERAGLVAHAKRLLHELKR----PDNIPRETAIMVLARARRVEEATWVFRQAFAA-GEVND 527
G HAK L R P +I + A V + F + + G V
Sbjct: 411 AHQG---HAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 528 ISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLRE 578
I + +I+L SR + E +E M PD ++A +L A K ++
Sbjct: 468 IEHYTNIIDLLSRAGM---LDEAWEFMERFPGKPDEIMLAAILGACHKRKD 515
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 39/275 (14%)
Query: 306 ALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLR 365
ALS++ M + D T N + +L + G + S+ K+G+E +V ++L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 366 VYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQP 425
+Y + G A LF + +++ V++N+MI+ Y ++ + A +L ++M+ G +P
Sbjct: 176 MYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 426 NAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLL 485
+ T +++ G L +L + + + + L +I Y + G + A+R+
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 486 HELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYT 545
+++ + D + W MI +YS+N K +
Sbjct: 292 NQMIKKDRV------------------AWT-----------------AMITVYSQNGKSS 316
Query: 546 NVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFE 580
++F +M + G PD+ ++ VL+A G + E
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 389 QQNVVTYNTMINIYGKSL-EHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAA 447
+ N ++N MI + +HE A +L + M+ +G++P+ TY+ + K ++
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 448 MLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARAR 507
+ L G++ D + ++I+ Y + G V +A++L E+ D +
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV------------- 199
Query: 508 RVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIA 567
+W MI+ YS + +++F KM E G+ PD +
Sbjct: 200 -----SW-----------------NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLV 237
Query: 568 LVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKL 624
+L A L + L + + +++S+YG D +F ++
Sbjct: 238 SMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 162/380 (42%), Gaps = 32/380 (8%)
Query: 203 FWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
F+ + + V+ D+ YS ++ + +S + + + + PDL ++ F
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+ R A L +E GV T S++ LL + A SVF+ P D
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDS 255
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
+ NIMI + +L VEE +++ M + G P+ +SY+ L+ G + +++ +F
Sbjct: 256 CSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
++ KG + YN MI + + + +++ + M + +PN TYS ++S K K
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 443 LDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMV 502
+ A +F+++ S G VL T +V L ++ P A+++
Sbjct: 376 VSDALEIFEEMLSRG-----VLPTTGLVTSFLKPLCSYG-------------PPHAAMVI 417
Query: 503 LARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPD 562
++R+ AG S + ++ SR K ++ V+++M+E GY D
Sbjct: 418 YQKSRK-------------AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSD 464
Query: 563 SNVIALVLNAFGKLREFEKA 582
V +++ + E A
Sbjct: 465 VEVYEYIVDGLCIIGHLENA 484
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 13/317 (4%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP-DRYTYSTLITHFGKHGLLDSSLFW 204
S ++N +LR + A +F+ ++G P D +Y+ +I+ + K G ++
Sbjct: 220 STESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
L++M + D + YS+LIE + G + ++ IF +K PD YN+MI F
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLT 323
A+ F E+ + M D P+ +YS L++ + + +AL +F EM + P
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 324 TCNIM--IDVYGQLH--MVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHL 379
+ + + YG H MV ++ RK G + +Y LL+ G +++
Sbjct: 398 VTSFLKPLCSYGPPHAAMV-----IYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNV 452
Query: 380 FRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEK 439
+ MQ+ G +V Y +++ E A +++E G PN YS + S
Sbjct: 453 WDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMA 512
Query: 440 AGKLDRAAMLFQKLRSS 456
+ K + A LF K++ +
Sbjct: 513 SNKTELAYKLFLKIKKA 529
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 154/366 (42%), Gaps = 37/366 (10%)
Query: 112 LSIRFMVSLLSRETDWQRAL-ALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLF 170
LSI + +L+R A+ DW + + V +Y+V+LR + R K + +
Sbjct: 115 LSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL 174
Query: 171 DEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKL 230
M G+ PD + + F + + ++ ++ E V ++ L+ +
Sbjct: 175 KGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCER 234
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
S A S+F K +I D +YN MI+ + K E +L+EM ++G PD +SY
Sbjct: 235 SHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 291 STLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRK 350
S L +E L +ND+ VE +F +++
Sbjct: 294 SHL----------IEGLGRTGRINDS---------------------VE----IFDNIKH 318
Query: 351 MGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEK 410
G P+ YN ++ + + F E++ +R M + + N+ TY+ +++ K +
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 411 ATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIV 470
A + +EM + G+ P ++ + G A +++QK R +G +I + Y+ ++
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 471 AYERAG 476
R G
Sbjct: 439 RLSRFG 444
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 130/328 (39%), Gaps = 45/328 (13%)
Query: 326 NIMIDVYGQLHMVEEGDRLF--WSMRKMGIEPNVVSYNTLLRVYGESELFG--------- 374
+I+ DV + ++ E F W++R+ G+ +V SY+ +LR G +LF
Sbjct: 118 DIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGM 177
Query: 375 --------------------------EAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEH 408
AI LF + GV+ + ++N ++ + H
Sbjct: 178 VCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCER-SH 236
Query: 409 EKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTM 468
A + + I ++ +Y+ +IS W K G+++ + +++ SG D + Y +
Sbjct: 237 VSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHL 296
Query: 469 IVAYERAGLVAHAKRLLHELKRPDNIPRETA----IMVLARARRVEEATWVFRQAFAAGE 524
I R G + + + +K N+P I AR +E+ +R+
Sbjct: 297 IEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 356
Query: 525 VNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADA 584
++ + +++ + +K ++ +E+FE+M G P + ++ L A
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV 416
Query: 585 LYSQIHDEGCVFPDEVH---FQMLSLYG 609
+Y + GC + + + LS +G
Sbjct: 417 IYQKSRKAGCRISESAYKLLLKRLSRFG 444
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 127/306 (41%), Gaps = 14/306 (4%)
Query: 100 LHAVMSLYNQRQLSIRF-------MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNV 152
+ A S++N ++ +I F M+S S+ + + +L + E + P +Y+
Sbjct: 237 VSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESG-FGPDCLSYSH 295
Query: 153 VLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDN 212
++ + R + + + +FD ++ +G PD Y+ +I +F D S+ + ++M +
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 213 VSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREAR 272
+L YS L+ K S A+ IF + + + P S + A
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Query: 273 LLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVY 332
++ Q+ R G +Y LL + L+V+ EM ++ P D+ ++D
Sbjct: 416 VIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGL 475
Query: 333 GQLHMVEEGDRLFWSMRKMGIEPNVVSYNTL---LRVYGESELFGEAIHLFRLMQKKGVQ 389
+ +E + + G PN Y+ L L ++EL A LF ++K
Sbjct: 476 CIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTEL---AYKLFLKIKKARAT 532
Query: 390 QNVVTY 395
+N ++
Sbjct: 533 ENARSF 538
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/530 (20%), Positives = 228/530 (43%), Gaps = 66/530 (12%)
Query: 115 RFMVSLLSRETDWQR---ALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFD 171
R M ++ T ++R A++ + + E P+VF YN + + + + L+
Sbjct: 806 RLMNQFITACTSFKRLDLAVSTMTQMQE-----PNVFVYNALFKGFVTCSHPIRSLELYV 860
Query: 172 EMRQRGLAPDRYTYSTLIT-------------------HFGKHGLLDSSL--FW------ 204
M + ++P YTYS+L+ FG H + ++L F+
Sbjct: 861 RMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRI 920
Query: 205 --LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF 262
+++ + D + ++ ++ R++ D A S+ ++ + A N +IN +
Sbjct: 921 REARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS----NCLINGY 976
Query: 263 GKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDL 322
+A L +M D +S++T++ Y N+R+ EA++VF +M + D
Sbjct: 977 MGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDE 1032
Query: 323 TTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRL 382
T + +I L ++E G + + G +V + L+ +Y + A+ +F
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 383 MQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGK 442
+ KK N+ +N++I ++A + +M+ ++PNA+T+ ++ + AG
Sbjct: 1093 LPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 443 LDRAAMLFQKLRSSGVQIDQV-LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIM 501
+D +++ + + V Y M+ + +AGL+ A L+ ++ N A++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 502 VLARARR-VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
R + + A F + +N F ++++Y+ ++ +V E+ +MRE+G
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF-LLVSMYAEQNRWRDVAEIRGRMRELG-- 1265
Query: 561 PDSNVIALVLNAFGKLREFEKADALYS------QIHDEGCVFPDEVHFQM 604
I + +R +K D L++ DE C+ DE++ QM
Sbjct: 1266 -----IEKICPGTSSIR-IDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 201/490 (41%), Gaps = 44/490 (8%)
Query: 185 YSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLK 244
+ T T F + LD ++ + QM++ NV L+ + S + +++ ++ R+
Sbjct: 811 FITACTSFKR---LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI----RSLELYVRML 863
Query: 245 ASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFV 304
S++P Y+S++ A F E+ L + G +TL+ Y R
Sbjct: 864 RDSVSPSSYTYSSLVKASSFASRFGES--LQAHIWKFGFGFHVKIQTTLIDFYSATGRIR 921
Query: 305 EALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL 364
EA VF EM + D M+ Y ++ ++ + L M E N + N L+
Sbjct: 922 EARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMS----EKNEATSNCLI 973
Query: 365 RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
Y +A LF M K +++++ TMI Y ++ + +A + +M GI
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 425 PNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
P+ +T ST+IS G L+ + +G +D + ++ Y + G + A +
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 485 LHELKRPDNIPRETAIMVLARARRVEEATWVFR----QAFAAGEVNDISVF-GCM-INLY 538
L + + + I LA +EA +F ++ V +SVF C L
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 539 SRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCV--F 596
++ ++ M + D ++++ V + G + F KA +Y + G +
Sbjct: 1150 DEGRR------IYRSMID-----DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Query: 597 PDEVHFQMLSLYGAR--KDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASR 654
P+ V + L L G R K+ + E F KL +N L+VS +Y +R D +
Sbjct: 1199 PNAVIWGAL-LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVS-MYAEQNRWRDVAE 1256
Query: 655 IMNRMNHKAI 664
I RM I
Sbjct: 1257 IRGRMRELGI 1266
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 173/407 (42%), Gaps = 42/407 (10%)
Query: 183 YTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFAR 242
+ S L+ + K G + L ++E+ D+VL + LI + G+ ++A+ F
Sbjct: 202 FVGSALVDMYVKFGKTREAKLVLDRVEEK----DVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 243 LKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV------------------- 283
+ + P+ Y S++ G K +L+ M +G
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 284 ---------C---PDTVSYSTLLAIYVDNERFVEALSVFSEM-NDAKCPLDLTTCNIMID 330
C P+ VS+++L++ V N R AL F +M D+ P T + +
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 331 VYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQ 390
L M EEG ++ + K G + + + + L+ +YG+ A +F + +
Sbjct: 378 C-SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS----EV 432
Query: 391 NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLF 450
+V++ NTMI Y ++ +A +L + M N G+QPN +T +++ + ++ LF
Sbjct: 433 DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELF 492
Query: 451 QKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVE 510
R + + Y M+ RAG + A+ L E+ PD + T + R+VE
Sbjct: 493 DSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552
Query: 511 EATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV 557
A + R+ E D M NLY+ K+ V+E+ KM+++
Sbjct: 553 MAERITRKILEI-EPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 176/469 (37%), Gaps = 75/469 (15%)
Query: 221 SNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRD 280
S L++ S K GD A +F + I + +NS+I K + +EA + + M
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHI----VTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 281 NGVCPDTVSYSTLLAIYVD--------------------------NERFVEALSVFSEMN 314
N V PD + S++ + D V+ F +
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 315 DAKCPL------DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG 368
+AK L D+ +I Y Q E + F SM ++PN +Y ++L G
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIY------------GKSLEHEKA---TN 413
+ G + LM K G + + + +++ +Y K +E+ T+
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 414 LIQEMQNNG----------------IQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSG 457
LI + NG I+PN+ T S+ + + + + G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 458 VQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFR 517
D+ +I Y + G A+ + L D I T I A+ EA +F
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 518 QAFAAG-EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKL 576
+ G + ND++V ++ + ++ E+F+ R+ ++ A +++ G+
Sbjct: 459 RMINLGLQPNDVTVLSVLLAC-NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRA 517
Query: 577 REFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKL 624
E+A+ L +++ + PD V ++ +LS + M E + K+
Sbjct: 518 GRLEEAEMLTTEV-----INPDLVLWRTLLSACKVHRKVEMAERITRKI 561
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 200/509 (39%), Gaps = 84/509 (16%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR-GLAPDRYTYSTLITHFGKHGLLD--SS 201
P VF +NV++R + H + +F +R+ L P+ TY+ I+ G D +
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS--AASGFRDDRAG 138
Query: 202 LFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINV 261
Q D +L+L SN++++ K A +F R+ D I +N+MI+
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK----DTILWNTMISG 194
Query: 262 FGKAKLFREARLLLQEMRD--NGVCP--DTVSYSTLLAIYVDNERFVEALSVFSEMNDAK 317
+ K +++ E+ +Q RD N C DT + +L + + + + S
Sbjct: 195 YRKNEMYVES---IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 318 CPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVY---GESE--- 371
C I +Y + ++ G LF RK P++V+YN ++ Y GE+E
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRK----PDIVAYNAMIHGYTSNGETELSL 307
Query: 372 -LFGE---------------------------AIHLF----------------------- 380
LF E AIH +
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 381 ------RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTII 434
R + + ++++ ++N MI+ Y ++ E A +L +EMQ + PN +T + I+
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 435 SIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 494
S + G L + +RS+ + + +I Y + G +A A+RL + + + +
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 495 PRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKM 554
T I + +EA +F + +G F C++ S E+F M
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 555 -REVGYFPDSNVIALVLNAFGKLREFEKA 582
G+ P A +++ G+ ++A
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 183/469 (39%), Gaps = 91/469 (19%)
Query: 159 RAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLV 218
+ + + LF E R+ PD Y+ +I + +G + SL +++ +SG +
Sbjct: 268 KCGKIKMGSALFREFRK----PDIVAYNAMIHGYTSNGETELSLSLFKEL---MLSGARL 320
Query: 219 LYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEM 278
S L+ L G +I S+ ++ V+ K AR L E
Sbjct: 321 RSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 279 RDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMV 338
+ + S++ +++ Y N +A+S+F EM ++ + T ++ QL +
Sbjct: 381 PEKSL----PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 339 EEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTM 398
G + +R E ++ L+ +Y + EA LF LM KK N VT+NTM
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTM 492
Query: 399 INIYGKSLEHEKATNLIQEMQNNGIQPNAIT----------------------------- 429
I+ YG + ++A N+ EM N+GI P +T
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 430 -------YSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVA---YERAGLVA 479
Y+ ++ I +AG L RA Q + + ++ +++T++ A ++ L
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRA---LQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 480 HAKRLLHELKRPDNI----------------PRETAIMVLARARRVEEATWVFRQAFAAG 523
L EL PDN+ P+ + A+ R++ +A G
Sbjct: 610 TVSEKLFELD-PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY--TLIEIG 666
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEK-------MREVGYFPDSNV 565
E + G ++ + V E++EK MRE GY P++ +
Sbjct: 667 ETPHVFTSG--------DQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 707
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 164/383 (42%), Gaps = 12/383 (3%)
Query: 145 PSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFW 204
P+ F +++VL R + M + GL + Y L+ + K + +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 205 LQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGK 264
+ + N L+S + K G +A+ +F R++ PD +A+ ++IN + +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYV----KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTT 324
++ARLL EM PD V+++ +++ + A+ F M + +T
Sbjct: 274 LGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 325 CNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQ 384
++ G + ++ G + K+G+ N+ ++L+ +Y + E A +F ++
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 385 KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLD 444
+K N V +N MI Y + E K L +M+++G + T+++++S + L+
Sbjct: 390 EK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 445 RAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLA 504
+ + + + + ++ Y + G + A+++ + DN+ T I
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 505 RARRVEEATWVFRQAFAAGEVND 527
+ EA +F++ G V+D
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSD 528
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/549 (19%), Positives = 218/549 (39%), Gaps = 87/549 (15%)
Query: 117 MVSLLSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQR 176
+VS+ S+ + A + + + EK VF +N ++R + H LF +M+
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEK----NDVF-WNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 177 GLAPDRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKA 236
G D +T+++L++ S DL ++G +
Sbjct: 423 GYNIDDFTFTSLLSTCA-------------------ASHDL-----------EMGSQFHS 452
Query: 237 ISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAI 296
I I +L A +L N++++++ K +AR + + M D D V+++T++
Sbjct: 453 IIIKKKL-----AKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGS 503
Query: 297 YVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPN 356
YV +E EA +F MN D + +H + +G ++ K G++ +
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 357 VVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQ 416
+ + ++L+ +Y + + +A +F + + +VV+ N +I Y ++ E+A L Q
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQN-NLEEAVVLFQ 618
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQID-QVLYQTMIVAYERA 475
EM G+ P+ IT++TI+ K L ++ G + + L +++ Y +
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 476 GLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMI 535
+ A L EL P +I T M+
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTG----------------------------------MM 704
Query: 536 NLYSRNKKYTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCV 595
+ +S+N Y ++ +++MR G PD VL L + A++S I
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 596 FPDEVHFQMLSLYGARKDFTMVESLFEKLDSNPNINKKELHLVVSGIYERADRLNDASRI 655
+ ++ +Y D +F+++ N+ + +++G Y + DA +I
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNV--VSWNSLING-YAKNGYAEDALKI 821
Query: 656 MNRMNHKAI 664
+ M I
Sbjct: 822 FDSMRQSHI 830
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 151/373 (40%), Gaps = 78/373 (20%)
Query: 150 YNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTY-STLITHFGKHGLLDSSLFWLQQM 208
+N ++ + ++ + A LF M G+ D STL HGL +
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 209 EQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLF 268
+ + DL S+LI++ K G A +F+ L S+ ++ N++I + + L
Sbjct: 557 KC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV----VSMNALIAGYSQNNL- 610
Query: 269 REARLLLQEMRDNGVCPDTVSYST------------------------------------ 292
EA +L QEM GV P ++++T
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 293 LLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMG 352
LL +Y+++ EA ++FSE++ P + M+ + Q EE + + MR G
Sbjct: 671 LLGMYMNSRGMTEACALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 353 IEPNVVSYNTLLRVYG--ESELFGEAIH--LFRLMQK-------------------KGVQ 389
+ P+ ++ T+LRV S G AIH +F L KG
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 390 Q---------NVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
Q NVV++N++IN Y K+ E A + M+ + I P+ IT+ +++ A
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 441 GKLDRAAMLFQKL 453
GK+ +F+ +
Sbjct: 848 GKVSDGRKIFEMM 860
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 43/312 (13%)
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYG-ESEL-FGEAIH 378
D+T N M+ +Y + + R F S+ + I PN +++ +L E+ + FG IH
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 379 LFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWE 438
M K G+++N ++++Y K A + + + + PN + ++ + S +
Sbjct: 184 CS--MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYV 237
Query: 439 KAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRET 498
KAG + A ++F+++R G + D + + T+I Y R G + A+ L E+ PD +
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWN- 296
Query: 499 AIMVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
+M+ +R GC T +E F MR+
Sbjct: 297 -VMISGHGKR-----------------------GC----------ETVAIEYFFNMRKSS 322
Query: 559 YFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGARKDFTMVE 618
+ + VL+A G + + ++++ G V ++S+Y +
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 619 SLFEKLDSNPNI 630
+FE L+ ++
Sbjct: 383 KVFEALEEKNDV 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 169 LFDEMRQRGLAPDRYTYSTLITHFG-----KHGLLDSSLFWLQQMEQDNVSGDLVLYSNL 223
+ EMR G+ PD+ T+ T++ + G SL + + D ++ + L
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN-----TL 773
Query: 224 IELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGV 283
I++ K GD + +F ++ S +++++NS+IN + K +A + MR + +
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 284 CPDTVSYSTLLAIYVDNERFVEALSVFSEM---NDAKCPLDLTTCNIMIDVYGQLHMVEE 340
PD +++ +L + + +F M + +D C M+D+ G+ ++E
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC--MVDLLGRWGYLQE 888
Query: 341 GDRLFWSMRKMGIEPNVVSYNTLL---RVYGESELFGEAIHLFRLMQKKGVQQNVVTYNT 397
D + ++P+ +++LL R++G+ ++ GE I +L++ + QN Y
Sbjct: 889 ADDF---IEAQNLKPDARLWSSLLGACRIHGD-DIRGE-ISAEKLIELE--PQNSSAYVL 941
Query: 398 MINIYGKSLEHEKATNLIQEMQNNGIQ 424
+ NIY EKA L + M++ G++
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDRGVK 968
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 312 EMNDAKCPLDLT-TCNIMIDVYGQLHMVEEGDRLFWSMRKMG--IEPNVVSYNTLLRVYG 368
E D + P +T C ++++ +L ++EGD + + +EPN V + L+
Sbjct: 304 EEADWREPKPVTGKCKLVME---KLESLQEGDDPSGLLAEWAELLEPNRVDWIALINQLR 360
Query: 369 ESELFGEAIHLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAI 428
E ++ +K ++ Y+ +I+I+ K E ++++M NGI P+ +
Sbjct: 361 EGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDIL 420
Query: 429 TYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
T + ++ ++ K+G +RA F+ L+S G++ D+ +Y+ MI+ Y AG +RL+ E+
Sbjct: 421 TATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEM 480
Query: 489 KRPDNIPRETAIMVLARA-RRVEEATWVF----RQAFAAGEVNDISVFGCMINLYSRNKK 543
+ + E M L RA ++ +A +A+ + + Y + +
Sbjct: 481 QAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQ 540
Query: 544 YTNVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEG 593
F++MR++G+ PD IA ++ A+ +KA L Q+ +G
Sbjct: 541 VDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 590
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 14/341 (4%)
Query: 152 VVLRNVLRAKQWH----LAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLDSSLFWLQQ 207
+ L N LR H +A G+ DE D YS LI K ++ L++
Sbjct: 353 IALINQLREGNTHAYLKVAEGVLDEKSFNASISD---YSKLIHIHAKENHIEDVERILKK 409
Query: 208 MEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVF---GK 264
M Q+ + D++ + L+ + K G++ +A F LK+ + PD Y +MI + GK
Sbjct: 410 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 469
Query: 265 AKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAK-CPLDLT 323
KL L++EM+ + Y LL Y A + S M A PL
Sbjct: 470 PKL---GERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE 526
Query: 324 TCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLM 383
++ ++ YG+ V++ F MRK+G +P+ L+R Y +A+ L +
Sbjct: 527 AYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQL 586
Query: 384 QKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKL 443
+K G++ V+TY +++ E+A L+ ++ G P ++ ++
Sbjct: 587 EKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNE 646
Query: 444 DRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRL 484
+ L + Q+ + +I A +R G A+R+
Sbjct: 647 KKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARRM 687
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 14/315 (4%)
Query: 193 GKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR----KLGDYSKAISIFARLKAS-- 246
GK L+ L LQ E D+ SG L ++ L+E +R L + + + A LK +
Sbjct: 316 GKCKLVMEKLESLQ--EGDDPSGLLAEWAELLEPNRVDWIALINQLREGNTHAYLKVAEG 373
Query: 247 -----SIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNE 301
S + Y+ +I++ K + +L++M NG+ PD ++ + L+ +Y +
Sbjct: 374 VLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSG 433
Query: 302 RFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYN 361
F A F + D MI Y + G+RL M+ ++ + Y
Sbjct: 434 NFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYM 493
Query: 362 TLLRVYGESELFGEAIHLFRLMQ-KKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQN 420
LLR Y + A + MQ + Y+ + YGK+ + +KA + EM+
Sbjct: 494 ALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRK 553
Query: 421 NGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAH 480
G +P+ + ++ ++ LD+A L +L G++I + Y ++ GL+
Sbjct: 554 LGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEE 613
Query: 481 AKRLLHELKRPDNIP 495
A++LL ++ + P
Sbjct: 614 AEQLLVKISQLGEAP 628
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 212/542 (39%), Gaps = 89/542 (16%)
Query: 146 SVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGK----------H 195
SV A+N+ +R + + LF EM++ G P+ +T+ + + H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 196 GLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAY 255
L S FW D+ + + +++ K A +F R+ D +
Sbjct: 76 AHLIKSPFW----------SDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DATTW 121
Query: 256 NSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMND 315
N+M++ F ++ +A L +EMR N + PD+V+ TL + + F ++L + M+
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAMHA 177
Query: 316 AKCPL----DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESE 371
L +T N I YG+ ++ +F ++ + + VVS+N++ + Y
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAY---S 232
Query: 372 LFGEAIHLF----------------------------------RLMQKK----GVQQNVV 393
+FGEA F RL+ G Q++
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 394 TYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL 453
NT I++Y KS + A L M + ++++ +IS + + G +D A LF +
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 454 RSSGVQIDQVLYQTMIVAYERAGLVAHAKRL-----LHELKRPDNIPRETAIMVLARARR 508
SG + D V ++I + G + K + ++ KR + + I + ++
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 509 VEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYFPDSNVIAL 568
+ EA R F + + MI Y+ N + +++F KM ++ Y P+
Sbjct: 409 IHEA----RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLA 464
Query: 569 VLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQ-MLSLYGARKDFTMVESLFEKLDSN 627
VL A EK + + + P H+ M+ L G + L + +
Sbjct: 465 VLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
Query: 628 PN 629
P+
Sbjct: 525 PD 526
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 210/515 (40%), Gaps = 57/515 (11%)
Query: 63 PSPYHRRTRTQQQMFLDHSIDMDELLASISSTQNEQELHA--VMSLYNQRQLSIRFMVSL 120
PS + RR + L + +L S + + +HA + + ++Q + ++ +
Sbjct: 12 PSTF-RRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRV 70
Query: 121 LSRETDWQRALALLDWINEKALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
S A + +++ +P+V+ Y ++ + + + L+ M + P
Sbjct: 71 CSTLDSVDYAYDVFSYVS-----NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP 125
Query: 181 DRYTYSTLI------------THFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSR 228
D Y ++++ K G S L+ ME SG+LV
Sbjct: 126 DNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELV---------- 175
Query: 229 KLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTV 288
A +F + D +A MIN + + +EA L Q+++ DTV
Sbjct: 176 ------NAKKMFDEMPDR----DHVAATVMINCYSECGFIKEALELFQDVK----IKDTV 221
Query: 289 SYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
++ ++ V N+ +AL +F EM + T ++ L +E G + +
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN---IYGKS 405
+E + N L+ +Y EA +FR+M+ K +V++YNTMI+ ++G S
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLAMHGAS 337
Query: 406 LEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKL-RSSGVQIDQVL 464
+E A N ++M N G +PN +T +++ G LD +F + R V+
Sbjct: 338 VE---AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 465 YQTMIVAYERAGLVAHAKRLLHELK-RPDNIPRETAIMVLARARRVEEATWVFRQAFAAG 523
Y ++ R G + A R + + PD+I T + +E + ++ F +
Sbjct: 395 YGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFES- 453
Query: 524 EVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVG 558
E D + + NLY+ + K+ E+ E MR+ G
Sbjct: 454 ENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSG 488
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 178/455 (39%), Gaps = 31/455 (6%)
Query: 216 DLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLL 275
D + LI + L A +F+ + P++ Y +MI+ F + + L
Sbjct: 60 DAFVVFELIRVCSTLDSVDYAYDVFSYVSN----PNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 276 QEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMNDAKCPLDLTTCNI----MIDV 331
M N V PD +++L L V E++ L + M+++
Sbjct: 116 HRMIHNSVLPDNYVITSVLKAC--------DLKVCREIHAQVLKLGFGSSRSVGLKMMEI 167
Query: 332 YGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQN 391
YG+ + ++F M + + V+ ++ Y E EA+ LF+ ++ K +
Sbjct: 168 YGKSGELVNAKKMFDEMP----DRDHVAATVMINCYSECGFIKEALELFQDVKIK----D 219
Query: 392 VVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQ 451
V + MI+ ++ E KA L +EMQ + N T ++S G L+ +
Sbjct: 220 TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS 279
Query: 452 KLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEE 511
+ + +++ + +I Y R G + A+R+ ++ D I T I LA E
Sbjct: 280 FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 339
Query: 512 ATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREV-GYFPDSNVIALVL 570
A FR G + ++N S +EVF M+ V P ++
Sbjct: 340 AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIV 399
Query: 571 NAFGKLREFEKADALYSQIHDEGCVFPDEVHF-QMLSLYGARKDFTMVESLFEKLDSNPN 629
+ G++ E+A I E PD + +LS + + E + ++L + N
Sbjct: 400 DLLGRVGRLEEAYRFIENIPIE----PDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN 455
Query: 630 INKKELHLVVSGIYERADRLNDASRIMNRMNHKAI 664
+ ++++S +Y + + +++ I M I
Sbjct: 456 PDSGT-YVLLSNLYASSGKWKESTEIRESMRDSGI 489
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 149 AYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAPDRYTYSTLITHFGKHGLLD-----SSLF 203
+ ++ ++R K+ + A LF EM+ ++ + +T +++ G L+ S
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 204 WLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIFARLKASSIAPDLIAYNSMINVFG 263
Q+ME N G+ LI + + GD ++A +F ++ D+I+YN+MI+
Sbjct: 282 ENQRMELSNFVGNA-----LINMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLA 332
Query: 264 KAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDNERFVEALSVFSEMN---DAKCPL 320
EA ++M + G P+ V+ LL L VF+ M + + +
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQI 392
Query: 321 DLTTCNIMIDVYGQLHMVEEGDRLFWSMRKMGIEPNVVSYNTLL---RVYGESELFGEAI 377
+ C ++D+ G++ +EE R + + IEP+ + TLL +++G EL GE I
Sbjct: 393 EHYGC--IVDLLGRVGRLEEAYRF---IENIPIEPDHIMLGTLLSACKIHGNMEL-GEKI 446
Query: 378 HLFRLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQ 424
RL + + TY + N+Y S + +++T + + M+++GI+
Sbjct: 447 AK-RLFESENPDSG--TYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 133/283 (46%), Gaps = 15/283 (5%)
Query: 181 DRYTYSTLITHFGKHGLLDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLGDYSKAISIF 240
D ++ +I ++ ++ +L ++M+ +NVS + ++ LG +
Sbjct: 219 DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVH 278
Query: 241 ARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSYSTLLAIYVDN 300
+ ++ + N++IN++ + EAR + + MRD D +SY+T+++ +
Sbjct: 279 SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLAMH 334
Query: 301 ERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSMRKM-GIEPNVVS 359
VEA++ F +M + + T +++ +++ G +F SM+++ +EP +
Sbjct: 335 GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 360 YNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTYNTMIN---IYGKSLEHEKATNLIQ 416
Y ++ + G EA +R ++ ++ + + T+++ I+G EK +
Sbjct: 395 YGCIVDLLGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF 451
Query: 417 EMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQ 459
E +N P++ TY + +++ +GK + + + +R SG++
Sbjct: 452 ESEN----PDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 182/407 (44%), Gaps = 31/407 (7%)
Query: 124 ETDWQRALALLDWINE---KALYSPSVFAYNVVLRNVLRAKQWHLAHGLFDEMRQRGLAP 180
E+D +AL + E P+ F + VL+ + + + + G
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 181 DRYTYSTLITHFGKHGLLDSS--LFWLQQMEQDNV--------SGDLVLYSNLIELSRKL 230
D + S L+ + G + + LF+ +E+D V G++VL++ +I+ +L
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 231 GDYSKAISIFARLKASSIAPDLIAYNSMINVFGKAKLFREARLLLQEMRDNGVCPDTVSY 290
GD A +F +++ S+ +++N+MI+ + F++A + +EM+ + P+ V+
Sbjct: 222 GDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 291 STLLAIY--VDNERFVEALSVFSEMNDAKCPLDLTTCNIMIDVYGQLHMVEEGDRLFWSM 348
++L + + E L +++E D+ +D + +ID+Y + ++E+ +F +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAE--DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 349 RKMGIEPNVVSYNTLLRVYGESELFGEAIHLFRLMQKKGVQQNVVTY-NTMINIYGKSLE 407
+ NV++++ ++ + G+AI F M++ GV+ + V Y N + L
Sbjct: 336 PR----ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 408 HEKATNLIQEMQNNGIQPNAITYSTIISIWEKAGKLDRAAMLFQKLRSSGVQIDQVLYQT 467
E Q + +G++P Y ++ + ++G LD A + ++ D V+++
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKA 448
Query: 468 MIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLARARRVEEATW 514
++ A G V KR+ + L D +P ++ V + W
Sbjct: 449 LLGACRMQGNVEMGKRVANILM--DMVPHDSGAYVALSNMYASQGNW 493
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 381 RLMQKKGVQQNVVTYNTMINIYGKSLEHEKATNLIQEMQNNGIQPNAITYSTIISIWEKA 440
R++ K Q++VV++NTMI+ Y + + A + +EM+ I+PN +T +++ +
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 441 GKLDRAAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAI 500
G L+ L SG++ID VL +I Y + G++ A +H +R +PRE I
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA---IHVFER---LPRENVI 341
Query: 501 MVLARARRVEEATWVFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVFEKMREVGYF 560
TW MIN ++ + + + ++ F KMR+ G
Sbjct: 342 ------------TW-----------------SAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 561 PDSNVIALVLNAFGKLREFEKADALYSQI 589
P +L A E+ +SQ+
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 21/253 (8%)
Query: 389 QQNVVTYNTMINIYGKSLEHEK--ATNLIQEMQNNG-IQPNAITYSTIISIWEKAGKLDR 445
Q+N ++NT+I + +S E + A L EM ++ ++PN T+ +++ K GK+
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 446 AAMLFQKLRSSGVQIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMVLAR 505
+ G D+ + ++ Y G + A+ L ++ + I ++ +M R
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK----NIIEKDMVVMTDRR 202
Query: 506 ARRVEEATW--------------VFRQAFAAGEVNDISVFGCMINLYSRNKKYTNVVEVF 551
R E W R F + + MI+ YS N + + VEVF
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 552 EKMREVGYFPDSNVIALVLNAFGKLREFEKADALYSQIHDEGCVFPDEVHFQMLSLYGAR 611
+M++ P+ + VL A +L E + L+ D G D + ++ +Y
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 612 KDFTMVESLFEKL 624
+FE+L
Sbjct: 323 GIIEKAIHVFERL 335