Miyakogusa Predicted Gene

Lj0g3v0278519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278519.1 Non Chatacterized Hit- tr|B8BJN6|B8BJN6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,73.68,0.000000000000001,seg,NULL;
UNCHARACTERIZED,NULL,CUFF.18524.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57890.1 | Symbols:  | Tubulin binding cofactor C domain-cont...   226   9e-60
AT2G42230.2 | Symbols:  | C-CAP/cofactor C-like domain-containin...   211   2e-55
AT2G42230.1 | Symbols:  | C-CAP/cofactor C-like domain-containin...   211   3e-55
AT3G57890.2 | Symbols:  | Tubulin binding cofactor C domain-cont...   208   2e-54

>AT3G57890.1 | Symbols:  | Tubulin binding cofactor C
           domain-containing protein | chr3:21438271-21441695
           FORWARD LENGTH=573
          Length = 573

 Score =  226 bits (576), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 117/166 (70%), Positives = 132/166 (79%), Gaps = 2/166 (1%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPI KL+F+DP QTL   K KL  D             + LQI  DHA L+L+TL
Sbjct: 38  FEHGLLPIQKLVFTDPIQTLAPVKQKLA-DAASNNRVGSAAIADVLQISGDHARLVLETL 96

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
            SV HS SDPLVRA+P   D+VGAD+ DL+L LYIQSYKKLLPR+HKD+AA VADVWPST
Sbjct: 97  GSVLHSESDPLVRAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDSAA-VADVWPST 155

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGYLSALSP+QLVRSNSRRF+PSQAD+EAHQLSYLQKHLANI+
Sbjct: 156 SAFDGYLSALSPIQLVRSNSRRFMPSQADDEAHQLSYLQKHLANII 201


>AT2G42230.2 | Symbols:  | C-CAP/cofactor C-like domain-containing
           protein | chr2:17593705-17596563 REVERSE LENGTH=568
          Length = 568

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 2/166 (1%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPI KL+F+DP QTL   K KL                ++L I  DHA L+L+TL
Sbjct: 31  FEHGLLPIQKLVFTDPIQTLAPIKQKLA-SLATNHRVGSAAISDALSISDDHARLVLETL 89

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
           +SV H  +DPLV A+P   D+VGAD+ DL+L LYIQSYKKLLPR+HKD+A+ VADVWPST
Sbjct: 90  SSVLHCETDPLVLAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDSAS-VADVWPST 148

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGYLSALSP+QLVRSNSRRF+PS  DEEAHQLSYLQKH+ANI+
Sbjct: 149 SAFDGYLSALSPIQLVRSNSRRFMPSPTDEEAHQLSYLQKHIANII 194


>AT2G42230.1 | Symbols:  | C-CAP/cofactor C-like domain-containing
           protein | chr2:17593807-17596563 REVERSE LENGTH=562
          Length = 562

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 2/166 (1%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPI KL+F+DP QTL   K KL                ++L I  DHA L+L+TL
Sbjct: 31  FEHGLLPIQKLVFTDPIQTLAPIKQKLA-SLATNHRVGSAAISDALSISDDHARLVLETL 89

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
           +SV H  +DPLV A+P   D+VGAD+ DL+L LYIQSYKKLLPR+HKD+A+ VADVWPST
Sbjct: 90  SSVLHCETDPLVLAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDSAS-VADVWPST 148

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGYLSALSP+QLVRSNSRRF+PS  DEEAHQLSYLQKH+ANI+
Sbjct: 149 SAFDGYLSALSPIQLVRSNSRRFMPSPTDEEAHQLSYLQKHIANII 194


>AT3G57890.2 | Symbols:  | Tubulin binding cofactor C
           domain-containing protein | chr3:21438271-21441695
           FORWARD LENGTH=609
          Length = 609

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/202 (57%), Positives = 132/202 (65%), Gaps = 38/202 (18%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPI KL+F+DP QTL   K KL  D             + LQI  DHA L+L+TL
Sbjct: 38  FEHGLLPIQKLVFTDPIQTLAPVKQKLA-DAASNNRVGSAAIADVLQISGDHARLVLETL 96

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
            SV HS SDPLVRA+P   D+VGAD+ DL+L LYIQSYKKLLPR+HKD +AAVADVWPST
Sbjct: 97  GSVLHSESDPLVRAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKD-SAAVADVWPST 155

Query: 144 SAFDGYLSALSPLQ------------------------------------LVRSNSRRFV 167
           SAFDGYLSALSP+Q                                    LVRSNSRRF+
Sbjct: 156 SAFDGYLSALSPIQSCNILFPVWYGCSIESFRKQSYNLKLFSVFYSHCSLLVRSNSRRFM 215

Query: 168 PSQADEEAHQLSYLQKHLANIL 189
           PSQAD+EAHQLSYLQKHLANI+
Sbjct: 216 PSQADDEAHQLSYLQKHLANII 237