Miyakogusa Predicted Gene

Lj0g3v0278359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278359.1 Non Chatacterized Hit- tr|D8RGC4|D8RGC4_SELML
Putative uncharacterized protein OS=Selaginella moelle,33.8,2e-18,GB
DEF: F14N23.28,NULL; FAMILY NOT NAMED,NULL,CUFF.18499.1
         (170 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10385.1 | Symbols:  | Vps51/Vps67 family (components of vesi...   224   2e-59
AT5G49830.1 | Symbols: EXO84B | exocyst complex component 84B | ...   173   5e-44
AT5G49830.3 | Symbols: EXO84B | exocyst complex component 84B | ...   173   5e-44
AT5G49830.2 | Symbols: EXO84B | exocyst complex component 84B | ...   173   5e-44
AT1G10180.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    94   3e-20

>AT1G10385.1 | Symbols:  | Vps51/Vps67 family (components of
           vesicular transport) protein | chr1:3403224-3405856
           FORWARD LENGTH=754
          Length = 754

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/168 (63%), Positives = 132/168 (78%), Gaps = 2/168 (1%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           +Y+ MD+   E+PEWFPSPIFQELF KLTR+A I +D+FVGR+RFAT+LLMRL ETV+LW
Sbjct: 578 IYILMDE-TTEEPEWFPSPIFQELFAKLTRIAMIVSDMFVGRERFATILLMRLTETVILW 636

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           +S+DQ+FWEE+E              YLDM+FVMIF+SQGRYLSR+LHQ IKNII RA++
Sbjct: 637 ISDDQSFWEEMETGDKPLGPLGLQQFYLDMEFVMIFASQGRYLSRNLHQVIKNIIARAVE 696

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAF-DNVEGDDNSPT 167
           AV+ATGLDP S LPE+EWF EV++IAIKML GK  F  + E D  SP+
Sbjct: 697 AVSATGLDPYSTLPEEEWFAEVAQIAIKMLMGKGNFGGHGERDVTSPS 744


>AT5G49830.1 | Symbols: EXO84B | exocyst complex component 84B |
           chr5:20250803-20254766 REVERSE LENGTH=752
          Length = 752

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 117/167 (70%), Gaps = 3/167 (1%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MY+++D+   E  ++FPS IFQELF KL R+A +A D+FVGR+RFA  LLMRL ETV+LW
Sbjct: 572 MYVNIDENG-EDVDFFPSLIFQELFAKLNRMASLAADMFVGRERFAISLLMRLTETVILW 630

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           LS DQ+FW++IE              YLDM+FV+ F+SQGRYLSR+LH+    II +A+ 
Sbjct: 631 LSGDQSFWDDIEEGPRPLGPLGLRQLYLDMKFVICFASQGRYLSRNLHRGTNEIISKALA 690

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPT 167
           A  ATG+DP S LPED+WF ++   A++ L+GK   +N  GD +SPT
Sbjct: 691 AFTATGIDPYSELPEDDWFNDICVDAMERLSGKTKGNN--GDVHSPT 735


>AT5G49830.3 | Symbols: EXO84B | exocyst complex component 84B |
           chr5:20250803-20254766 REVERSE LENGTH=783
          Length = 783

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 117/167 (70%), Gaps = 3/167 (1%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MY+++D+   E  ++FPS IFQELF KL R+A +A D+FVGR+RFA  LLMRL ETV+LW
Sbjct: 603 MYVNIDENG-EDVDFFPSLIFQELFAKLNRMASLAADMFVGRERFAISLLMRLTETVILW 661

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           LS DQ+FW++IE              YLDM+FV+ F+SQGRYLSR+LH+    II +A+ 
Sbjct: 662 LSGDQSFWDDIEEGPRPLGPLGLRQLYLDMKFVICFASQGRYLSRNLHRGTNEIISKALA 721

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPT 167
           A  ATG+DP S LPED+WF ++   A++ L+GK   +N  GD +SPT
Sbjct: 722 AFTATGIDPYSELPEDDWFNDICVDAMERLSGKTKGNN--GDVHSPT 766


>AT5G49830.2 | Symbols: EXO84B | exocyst complex component 84B |
           chr5:20250803-20254766 REVERSE LENGTH=814
          Length = 814

 Score =  173 bits (438), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 117/167 (70%), Gaps = 3/167 (1%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MY+++D+   E  ++FPS IFQELF KL R+A +A D+FVGR+RFA  LLMRL ETV+LW
Sbjct: 634 MYVNIDENG-EDVDFFPSLIFQELFAKLNRMASLAADMFVGRERFAISLLMRLTETVILW 692

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           LS DQ+FW++IE              YLDM+FV+ F+SQGRYLSR+LH+    II +A+ 
Sbjct: 693 LSGDQSFWDDIEEGPRPLGPLGLRQLYLDMKFVICFASQGRYLSRNLHRGTNEIISKALA 752

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPT 167
           A  ATG+DP S LPED+WF ++   A++ L+GK   +N  GD +SPT
Sbjct: 753 AFTATGIDPYSELPEDDWFNDICVDAMERLSGKTKGNN--GDVHSPT 797


>AT1G10180.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: exocyst complex component 84B (TAIR:AT5G49830.1);
           Has 132 Blast hits to 132 proteins in 25 species: Archae
           - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117;
           Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
           | chr1:3338381-3341494 REVERSE LENGTH=769
          Length = 769

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 71/135 (52%)

Query: 16  FPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLWLSEDQAFWEEIEXXX 75
            PS  FQ LF KL ++A IA DV +G+++   +LL RL ETV++WLS +Q FW   E   
Sbjct: 566 LPSLPFQALFSKLQQLAIIAGDVLLGKEKLQKILLARLTETVIIWLSNEQEFWSAFEDES 625

Query: 76  XXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAIDAVAATGLDPNSVLPE 135
                       LDM F +  +    Y  + +      +I RAI+  +  G++P S LP+
Sbjct: 626 NPLQPSGLQQLILDMNFTVEIARFAGYPFKVVQNHASVVINRAINIFSERGINPQSSLPK 685

Query: 136 DEWFVEVSEIAIKML 150
            EWF E ++ AI  L
Sbjct: 686 TEWFTEAAKSAINRL 700