Miyakogusa Predicted Gene

Lj0g3v0277319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277319.1 Non Chatacterized Hit- tr|Q3M7M3|Q3M7M3_ANAVT
Putative uncharacterized protein OS=Anabaena
variabili,35.51,9e-19,seg,NULL; DUF4281,Protein of unknown function
DUF4281,CUFF.18408.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67080.1 | Symbols: ABA4 | abscisic acid (aba)-deficient 4 | ...   255   2e-68

>AT1G67080.1 | Symbols: ABA4 | abscisic acid (aba)-deficient 4 |
           chr1:25045405-25046681 REVERSE LENGTH=220
          Length = 220

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 151/184 (82%), Gaps = 2/184 (1%)

Query: 47  NRRINLKGDWSFIGGSRMVVNQQVVRLVPYRKASRVYASWLSGGPELASSVFTLATTAVL 106
           + +I L   WSFIGGSR+ V      +V ++K S V ASWL+   ++ASSVF + TTAVL
Sbjct: 33  SSKIRLDHRWSFIGGSRISVQSNSYTVV-HKKFSGVRASWLTT-TQIASSVFAVGTTAVL 90

Query: 107 PFYTLMIVAPNSELTKKSMVSGVPYVVLGILYAYLLYLSWTPETVELIFASKYLLPELTS 166
           PFYTLM+VAP +E+TKK M S VPY++LG+LY YLLY+SWTPET++ +F+SKY+LPEL+ 
Sbjct: 91  PFYTLMVVAPKAEITKKCMESSVPYIILGVLYVYLLYISWTPETLKYMFSSKYMLPELSG 150

Query: 167 IGKMFSSEMTLASAWVHLLAIDLFAARQVFLDGLENQIETRHSVSLCLFFCPVGILTHVI 226
           I KMFSSEMTLASAW+HLL +DLFAARQV+ DGLENQIETRHSVSLCL FCPVGI++H +
Sbjct: 151 IAKMFSSEMTLASAWIHLLVVDLFAARQVYNDGLENQIETRHSVSLCLLFCPVGIVSHFV 210

Query: 227 TKAI 230
           TKAI
Sbjct: 211 TKAI 214