Miyakogusa Predicted Gene

Lj0g3v0277019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277019.1 Non Chatacterized Hit- tr|F6GUG8|F6GUG8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52,0.000000000000003,Tub_2,LURP1-like domain; Tubby C-terminal
domain-like,Tubby C-terminal-like domain,gene.g21552.t1.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30270.1 | Symbols:  | Protein of unknown function (DUF567) |...    86   8e-18
AT5G01750.1 | Symbols:  | Protein of unknown function (DUF567) |...    66   1e-11
AT5G01750.2 | Symbols:  | Protein of unknown function (DUF567) |...    65   2e-11
AT1G33840.1 | Symbols:  | Protein of unknown function (DUF567) |...    57   4e-09
AT3G11740.1 | Symbols:  | Protein of unknown function (DUF567) |...    56   1e-08
AT3G16900.1 | Symbols:  | Protein of unknown function (DUF567) |...    54   7e-08

>AT2G30270.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr2:12908027-12909057 REVERSE LENGTH=182
          Length = 182

 Score = 86.3 bits (212), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 9/132 (6%)

Query: 31  IPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYR- 89
           IP+DLF SKK  G   G L FAD+  +++F +       +   K LLD+SG  +FSI R 
Sbjct: 18  IPVDLFASKKLPGLSSGDLGFADSSEHLVFILR----KSSSSLKSLLDSSGVPLFSISRL 73

Query: 90  HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRS 149
           H G W+ +KG+ +  KDLV  V+RT K  ++ E EV F GE   N    L ++G PFQ+S
Sbjct: 74  HNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKGVPFQKS 129

Query: 150 CSIYKDTDLVAQ 161
           C+IY    +VAQ
Sbjct: 130 CTIYSQDSIVAQ 141


>AT5G01750.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr5:290034-290685 FORWARD LENGTH=174
          Length = 174

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           PID+   +K      G     D  GN+LF V + P    + K++LLD SG  + ++    
Sbjct: 37  PIDMAIVRKMMSLTDGNFVITDVNGNLLFKV-KEPVFGLHDKRVLLDGSGTPVVTLREKM 95

Query: 92  GS----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
            S    W+ ++G     +DL++ V+R+     + +L+VF  G   + + CD +++GS  +
Sbjct: 96  VSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNKDEKRCDFRVKGSWLE 154

Query: 148 RSCSIY--KDTDLVAQV 162
           RSC +Y  +   +VAQV
Sbjct: 155 RSCVVYAGESDAIVAQV 171


>AT5G01750.2 | Symbols:  | Protein of unknown function (DUF567) |
           chr5:290034-291109 FORWARD LENGTH=217
          Length = 217

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           PID+   +K      G     D  GN+LF V + P    + K++LLD SG  + ++    
Sbjct: 37  PIDMAIVRKMMSLTDGNFVITDVNGNLLFKV-KEPVFGLHDKRVLLDGSGTPVVTLREKM 95

Query: 92  GS----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
            S    W+ ++G     +DL++ V+R+     + +L+VF  G   + + CD +++GS  +
Sbjct: 96  VSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNKDEKRCDFRVKGSWLE 154

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +   +VAQ+ 
Sbjct: 155 RSCVVYAGESDAIVAQMH 172


>AT1G33840.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:12283862-12285306 REVERSE LENGTH=230
          Length = 230

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 24  PGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNI 83
           P   SLH P+DL   +K      G     +A GN+LF V + P    ++K++L+D  G  
Sbjct: 30  PKYCSLH-PVDLAIVRKVLKITDGNFVITNAEGNLLFKV-KDPFFSLHEKRILMDGFGTK 87

Query: 84  IFS----IYRHEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDL 139
           + +    I      W  ++G    + DL++ V+R+       +L+VF   +    + CD 
Sbjct: 88  VLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFL-ADNIEQKKCDY 146

Query: 140 KLRGSPFQRSCSIYK-DTDLV 159
           +L G   + SC +Y  D+D++
Sbjct: 147 RLEGVWLETSCFVYAGDSDII 167


>AT3G11740.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr3:3712427-3713389 FORWARD LENGTH=194
          Length = 194

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           PI+L   +K      G  A  D  GN+LF V + P      K++LLDA    I ++  ++
Sbjct: 13  PIELGIVRKVMTLTDGNFAVTDVNGNLLFKV-KEPLFSISDKRILLDAYDTPILTLRENK 71

Query: 92  GS----WKCYKGNGDGDKDLVFRVERT-LKTLTRVELEVFFDGERPNNEGCDLKLRGSPF 146
            S    W  Y+G      DL++ ++R+ +  + + +L++F        + CD  ++GS  
Sbjct: 72  VSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFL-AHNKEMKICDFHVKGSWI 130

Query: 147 QRSCSIY--KDTDLVAQVQ 163
            RSC +Y  K   +VAQ+ 
Sbjct: 131 DRSCVVYAGKSDAIVAQMH 149


>AT3G16900.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr3:5772106-5772849 FORWARD LENGTH=185
          Length = 185

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 9/116 (7%)

Query: 53  DALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHEGS----WKCYKGNGDGDKDLV 108
           DA GN +F V + P    + K++L+D + + I ++     S    W+ Y+G+   DK  +
Sbjct: 37  DATGNKVFKV-KTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDK--I 93

Query: 109 FRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY--KDTDLVAQV 162
           F V+R+     +  +EVF    +     CD  ++G   +R+C+IY    T ++AQV
Sbjct: 94  FTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIYVADSTKIIAQV 149