Miyakogusa Predicted Gene
- Lj0g3v0276769.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0276769.1 Non Chatacterized Hit- tr|B8LKV5|B8LKV5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,43.75,1e-17,CCT,CCT domain; seg,NULL,CUFF.18368.1
(288 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53420.1 | Symbols: | CCT motif family protein | chr5:216736... 243 8e-65
AT4G27900.2 | Symbols: | CCT motif family protein | chr4:138908... 239 1e-63
AT4G27900.1 | Symbols: | CCT motif family protein | chr4:138908... 239 1e-63
AT5G53420.2 | Symbols: | CCT motif family protein | chr5:216747... 181 7e-46
AT5G53420.3 | Symbols: | CCT motif family protein | chr5:216736... 141 5e-34
AT1G63820.1 | Symbols: | CCT motif family protein | chr1:236825... 81 8e-16
AT5G41380.1 | Symbols: | CCT motif family protein | chr5:165621... 80 1e-15
AT2G33350.2 | Symbols: | CCT motif family protein | chr2:141341... 78 5e-15
AT2G33350.1 | Symbols: | CCT motif family protein | chr2:141341... 75 5e-14
AT1G04500.1 | Symbols: | CCT motif family protein | chr1:122175... 75 7e-14
AT5G59990.1 | Symbols: | CCT motif family protein | chr5:241512... 62 4e-10
AT3G12890.1 | Symbols: ASML2 | activator of spomin::LUC2 | chr3:... 60 2e-09
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 57 1e-08
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 55 6e-08
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 55 7e-08
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 53 2e-07
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 52 3e-07
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 52 5e-07
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 52 6e-07
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 49 3e-06
>AT5G53420.1 | Symbols: | CCT motif family protein |
chr5:21673683-21675469 FORWARD LENGTH=264
Length = 264
Score = 243 bits (621), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 185/278 (66%), Gaps = 19/278 (6%)
Query: 6 MYAEANLLYPYLHNFSQELHQLEEYCTTQKFNDSMSD-LVEFSSMTEYDLTAEGDLFKAP 64
MY ++ L+ Y+ N ++ Q E+ + K +D M++ VE S+++EYD+ E DLF+AP
Sbjct: 1 MYQDSGLMLRYMQNCPPDIQQFEDLFKSYKLSDEMNNTFVESSNISEYDIGEESDLFRAP 60
Query: 65 EPIIEEPVMDLDSMTAAMPMISCGEDVSSQALESTDIDILQN-EQLLNEVFYECKKDLLQ 123
+PI+EEP++ +D ++AA+ MISCGED S E D+ LQ+ +QLL++ FYEC++DL+
Sbjct: 61 DPILEEPILTVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMM 120
Query: 124 NAALVSPLSEILEVK-IPLLSIDENSIQENKPLPDMPLPKXXXXXXXXXMDWMQGAAMKP 182
+A+ SP S++L++K I +++ +I EN+ + K MDW
Sbjct: 121 KSAMESPFSDVLDIKNISVVT----TINENQDMQ-----KSVSSGNLSSMDWSHAQQETV 171
Query: 183 AFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFFSSNCTSEERLQKLSR 242
+ P D YGMRR+FSEGDI+ LG G +VQSP +R S CTSE+R +KLSR
Sbjct: 172 MIQNFPDFDFG--YGMRRAFSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSR 224
Query: 243 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
Y+NKK++RNFGRKIKYACRKALADSQPR+RGRFAKTEE
Sbjct: 225 YKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262
>AT4G27900.2 | Symbols: | CCT motif family protein |
chr4:13890858-13892777 FORWARD LENGTH=261
Length = 261
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 186/280 (66%), Gaps = 27/280 (9%)
Query: 6 MYAEANLLYPYLHNFSQ-ELHQLEEYCTTQKFNDSMSDLVEFSSMTEYDLTAEGDLFKAP 64
MYAE +L + ++ + S E+HQ E+ + K +D M++LVE S EYD E DLFKAP
Sbjct: 1 MYAETSLAFRFMQSSSSPEIHQFEDLFKSYKLSDEMNNLVEAS---EYDFGEESDLFKAP 57
Query: 65 EPIIEEPVMDLDSMTAAMPMISCGEDVSSQALESTDIDILQ-NEQLLNEVFYECKKDLLQ 123
EPIIEEP++ +D + S + +E D+ LQ ++QL+++ FY+C++DLL
Sbjct: 58 EPIIEEPMLAVDPL-------------SQELVELGDLGSLQSDQQLIDKAFYDCEQDLLV 104
Query: 124 NAALVSPLSEILEVK-IPLLSIDENSIQENKPL-PDMPLPKXXXXXXXXXMDWMQGA-AM 180
+A+ SPLSE+L++K I L++ +N ++ + D+P+PK MD ++ A+
Sbjct: 105 KSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAV 164
Query: 181 KPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFFSSNCTSEERLQKL 240
F D P +D YGMRR+FSE DI+TLG GN +VQS +R S CTSE+R +KL
Sbjct: 165 IQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIIS--CTSEDRREKL 218
Query: 241 SRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
SRYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAKTEE
Sbjct: 219 SRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 258
>AT4G27900.1 | Symbols: | CCT motif family protein |
chr4:13890858-13892777 FORWARD LENGTH=261
Length = 261
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 186/280 (66%), Gaps = 27/280 (9%)
Query: 6 MYAEANLLYPYLHNFSQ-ELHQLEEYCTTQKFNDSMSDLVEFSSMTEYDLTAEGDLFKAP 64
MYAE +L + ++ + S E+HQ E+ + K +D M++LVE S EYD E DLFKAP
Sbjct: 1 MYAETSLAFRFMQSSSSPEIHQFEDLFKSYKLSDEMNNLVEAS---EYDFGEESDLFKAP 57
Query: 65 EPIIEEPVMDLDSMTAAMPMISCGEDVSSQALESTDIDILQ-NEQLLNEVFYECKKDLLQ 123
EPIIEEP++ +D + S + +E D+ LQ ++QL+++ FY+C++DLL
Sbjct: 58 EPIIEEPMLAVDPL-------------SQELVELGDLGSLQSDQQLIDKAFYDCEQDLLV 104
Query: 124 NAALVSPLSEILEVK-IPLLSIDENSIQENKPL-PDMPLPKXXXXXXXXXMDWMQGA-AM 180
+A+ SPLSE+L++K I L++ +N ++ + D+P+PK MD ++ A+
Sbjct: 105 KSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAV 164
Query: 181 KPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFFSSNCTSEERLQKL 240
F D P +D YGMRR+FSE DI+TLG GN +VQS +R S CTSE+R +KL
Sbjct: 165 IQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIIS--CTSEDRREKL 218
Query: 241 SRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
SRYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAKTEE
Sbjct: 219 SRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 258
>AT5G53420.2 | Symbols: | CCT motif family protein |
chr5:21674700-21675469 FORWARD LENGTH=185
Length = 185
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 131/199 (65%), Gaps = 18/199 (9%)
Query: 84 MISCGEDVSSQALESTDIDILQN-EQLLNEVFYECKKDLLQNAALVSPLSEILEVK-IPL 141
MISCGED S E D+ LQ+ +QLL++ FYEC++DL+ +A+ SP S++L++K I +
Sbjct: 1 MISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIKNISV 60
Query: 142 LSIDENSIQENKPLPDMPLPKXXXXXXXXXMDWMQGAAMKPAFLDIPGIDLSAVYGMRRS 201
++ +I EN+ + K MDW + P D YGMRR+
Sbjct: 61 VT----TINENQDMQ-----KSVSSGNLSSMDWSHAQQETVMIQNFPDFDFG--YGMRRA 109
Query: 202 FSEGDIKTLGNGNMNIVQSPHERPFFSSNCTSEERLQKLSRYRNKKTKRNFGRKIKYACR 261
FSEGDI+ LG G +VQSP +R S CTSE+R +KLSRY+NKK++RNFGRKIKYACR
Sbjct: 110 FSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSRYKNKKSRRNFGRKIKYACR 164
Query: 262 KALADSQPRIRGRFAKTEE 280
KALADSQPR+RGRFAKTEE
Sbjct: 165 KALADSQPRVRGRFAKTEE 183
>AT5G53420.3 | Symbols: | CCT motif family protein |
chr5:21673683-21675080 FORWARD LENGTH=205
Length = 205
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 126/210 (60%), Gaps = 14/210 (6%)
Query: 6 MYAEANLLYPYLHNFSQELHQLEEYCTTQKFNDSMSD-LVEFSSMTEYDLTAEGDLFKAP 64
MY ++ L+ Y+ N ++ Q E+ + K +D M++ VE S+++EYD+ E DLF+AP
Sbjct: 1 MYQDSGLMLRYMQNCPPDIQQFEDLFKSYKLSDEMNNTFVESSNISEYDIGEESDLFRAP 60
Query: 65 EPIIEEPVMDLDSMTAAMPMISCGEDVSSQALESTDIDILQN-EQLLNEVFYECKKDLLQ 123
+PI+EEP++ +D ++AA+ MISCGED S E D+ LQ+ +QLL++ FYEC++DL+
Sbjct: 61 DPILEEPILTVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMM 120
Query: 124 NAALVSPLSEILEVK-IPLLSIDENSIQENKPLPDMPLPKXXXXXXXXXMDWMQGAAMKP 182
+A+ SP S++L++K I +++ +I EN+ + K MDW
Sbjct: 121 KSAMESPFSDVLDIKNISVVT----TINENQ-----DMQKSVSSGNLSSMDWSHAQQETV 171
Query: 183 AFLDIPGIDLSAVYGMRRSFSEGDIKTLGN 212
+ P D YGMRR+FSEGDI+ N
Sbjct: 172 MIQNFPDFDFG--YGMRRAFSEGDIQVWQN 199
>AT1G63820.1 | Symbols: | CCT motif family protein |
chr1:23682529-23684050 REVERSE LENGTH=293
Length = 293
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 198 MRRSFSEGDIKTLGN---------------GNMNIVQSPHERPFFSSNCTSEERLQKLSR 242
MRR +S GD++ LG + V S E+ +SEER +K+S+
Sbjct: 139 MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISK 198
Query: 243 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
YR K+T+RNF + IKYACRK LAD++PR+RGRFA+ +E
Sbjct: 199 YRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDE 236
>AT5G41380.1 | Symbols: | CCT motif family protein |
chr5:16562129-16563553 REVERSE LENGTH=307
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 198 MRRSFSEGDIKTLGNGNMNIVQSPH--------ERPFFSSNCTSEERLQKLSRYRNKKTK 249
MRR +S GD++ NM + +S E+ F ++EER +K+S+YR K+ +
Sbjct: 173 MRRVYSTGDLQ----NNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQ 228
Query: 250 RNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
RNF + IKYACRK LADS+PRIRGRFA+ +E
Sbjct: 229 RNFTKTIKYACRKTLADSRPRIRGRFARNDE 259
>AT2G33350.2 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=409
Length = 409
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 198 MRRSFSEGDIKTLGNG--NMNIVQSPHERPFFS---------------SNCTSEERLQKL 240
++R F+ D++ LG G N + + +P P + E+R +K+
Sbjct: 255 IKRMFNPEDLQALGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEKI 314
Query: 241 SRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE-SEVKREGF 288
RY K+ +RNF +KIKYACRK LADS+PR+RGRFAK +E E R+ F
Sbjct: 315 RRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQAF 363
>AT2G33350.1 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=410
Length = 410
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 19/110 (17%)
Query: 198 MRRSFSEGDI-KTLGNG--NMNIVQSPHERPFFS---------------SNCTSEERLQK 239
++R F+ D+ K LG G N + + +P P + E+R +K
Sbjct: 255 IKRMFNPEDLQKALGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEK 314
Query: 240 LSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE-SEVKREGF 288
+ RY K+ +RNF +KIKYACRK LADS+PR+RGRFAK +E E R+ F
Sbjct: 315 IRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQAF 364
>AT1G04500.1 | Symbols: | CCT motif family protein |
chr1:1221757-1224235 REVERSE LENGTH=386
Length = 386
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 41/49 (83%)
Query: 232 TSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
++E+R +K+ RY K+ +RNF +KIKYACRK LADS+PR+RGRFAK +E
Sbjct: 284 SAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 332
>AT5G59990.1 | Symbols: | CCT motif family protein |
chr5:24151206-24153084 REVERSE LENGTH=241
Length = 241
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 243 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
YR+K+ RNF ++IKY CRK LADS+PRIRGRFA+ +E
Sbjct: 170 YRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDE 207
>AT3G12890.1 | Symbols: ASML2 | activator of spomin::LUC2 |
chr3:4099223-4100277 FORWARD LENGTH=251
Length = 251
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 234 EERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
EER ++ RY KK +RNF + IKY CRK LAD + R+RGRFA+ ++
Sbjct: 137 EERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDT 184
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 232 TSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESE 282
+S +R ++ RYR K+ R F + I+YA RKA A+S+PRI+GRFAK E+E
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETE 331
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 232 TSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
TS ER ++ RYR K+ R F + I+YA RKA A+ +PRI+GRFAK ++
Sbjct: 335 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDT 384
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 227 FSSNCTSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
F +C KL RY+ KK KR+FG++I+YA RKA AD++ R++GRF K +S
Sbjct: 299 FEVSCPQARNEAKL-RYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDS 352
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 235 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAK 277
ER ++ RYR KK R F + I+YA RKA A+ +PRI+GRFAK
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 235 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
ER ++ RYR K+ R F + I+YA RKA A+ +PRI+GRFAK +S
Sbjct: 228 EREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 235 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEVKREGF 288
+R ++ RYR K+ R F + I+YA RKA A+ +PR+ GRFAK E E + +GF
Sbjct: 305 DREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK-REIEAEEQGF 357
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 235 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 280
+R ++ RYR KK R F + I+YA RKA A+ +PRI+GRFAK ++
Sbjct: 285 DREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 179 AMKPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFF------SSNCT 232
A KPA +I S V G S GD + G + +Q E P++ ++ C+
Sbjct: 259 ASKPAHSNI---SFSGVTGES---SAGDFQECGASSS--IQLSGEPPWYPPTLQDNNACS 310
Query: 233 -SEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
S R + RY+ KK R F ++++YA RKA AD + R++GRF K E+
Sbjct: 311 HSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 179 AMKPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFF------SSNCT 232
A KPA +I S V G S GD + G + +Q E P++ ++ C+
Sbjct: 259 ASKPAHSNI---SFSGVTGES---SAGDFQECGASSS--IQLSGEPPWYPPTLQDNNACS 310
Query: 233 -SEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
S R + RY+ KK R F ++++YA RKA AD + R++GRF K E+
Sbjct: 311 HSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 179 AMKPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFF------SSNCT 232
A KPA +I S V G S GD + G + +Q E P++ ++ C+
Sbjct: 259 ASKPAHSNI---SFSGVTGES---SAGDFQECGASSS--IQLSGEPPWYPPTLQDNNACS 310
Query: 233 -SEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
S R + RY+ KK R F ++++YA RKA AD + R++GRF K E+
Sbjct: 311 HSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 179 AMKPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFF------SSNCT 232
A KPA +I S V G S GD + G + +Q E P++ ++ C+
Sbjct: 259 ASKPAHSNI---SFSGVTGES---SAGDFQECGASSS--IQLSGEPPWYPPTLQDNNACS 310
Query: 233 -SEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEES 281
S R + RY+ KK R F ++++YA RKA AD + R++GRF K E+
Sbjct: 311 HSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 235 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKT 278
ER LSRY+ KK R + + I+Y RK A+S+ RIRGRFAK
Sbjct: 286 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKA 329