Miyakogusa Predicted Gene
- Lj0g3v0276669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0276669.1 Non Chatacterized Hit- tr|K3XM87|K3XM87_SETIT
Uncharacterized protein OS=Setaria italica GN=Si003010,48.72,3e-19,CAD
& PB1 domains,NULL; AUX_IAA,AUX/IAA protein; FAMILY NOT NAMED,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisa,CUFF.18357.1
(177 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 136 6e-33
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 131 2e-31
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 117 6e-27
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 90 8e-19
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 90 8e-19
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 89 1e-18
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 88 3e-18
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 86 1e-17
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 86 1e-17
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 83 1e-16
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 82 2e-16
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 81 4e-16
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 81 4e-16
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 81 4e-16
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 81 4e-16
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 79 2e-15
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 78 2e-15
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 78 3e-15
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 78 4e-15
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 77 7e-15
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 75 2e-14
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 75 2e-14
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 75 2e-14
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 75 2e-14
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 71 5e-13
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 70 6e-13
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 70 9e-13
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 68 3e-12
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 68 3e-12
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 68 4e-12
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 68 4e-12
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 66 1e-11
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 66 1e-11
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 64 7e-11
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 62 3e-10
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 62 3e-10
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 59 2e-09
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 59 2e-09
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 59 2e-09
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 59 2e-09
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 59 2e-09
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 58 3e-09
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 58 3e-09
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 58 3e-09
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 58 3e-09
AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33... 55 2e-08
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 55 2e-08
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 55 2e-08
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 55 3e-08
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 5e-08
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 5e-08
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 5e-08
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 54 6e-08
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 54 6e-08
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 54 6e-08
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 54 7e-08
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 54 7e-08
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 53 9e-08
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 53 1e-07
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 51 4e-07
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 50 7e-07
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 50 1e-06
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 50 1e-06
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 49 2e-06
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 136 bits (343), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 100/148 (67%), Gaps = 3/148 (2%)
Query: 27 LTHQHTEGLQTDLRLGL--GISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNS 84
++ +T L TDLRLGL G S+ Q+ + + ++ + E N+C+ S
Sbjct: 23 VSSSNTRNLSTDLRLGLSFGSSSGQYYNGGDNHEYDGVGAAEEMMIMEEEEQNECNSVGS 82
Query: 85 FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYED 144
F+VKV MEG+PIGRK++LL NGY +L+ TL++MF+ +ILW E D + SE+ HVLTY D
Sbjct: 83 FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEED-MCSEKSHVLTYAD 141
Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKITRV 172
EGD +MVGDVPWE+FLS+V+RLKI+R
Sbjct: 142 KEGDWMMVGDVPWEMFLSSVRRLKISRA 169
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 14/151 (9%)
Query: 32 TEGLQTDLRLGLGIST---TQHVGSSTSRGHSWQPMQPDL------SSSQAAEVNDCSDH 82
T L TDLRLGL T TQ+ G+ + P + ++ + E N+C+
Sbjct: 27 TRNLSTDLRLGLSFGTSSGTQYFNG----GYGYSVAAPAVEDAEYVAAVEEEEENECNSV 82
Query: 83 NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTY 142
SF+VKV MEG+PIGRK++L+ NGY++L++TL+ MF+ +ILW E D + +E+ HVLTY
Sbjct: 83 GSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEED-MCNEKSHVLTY 141
Query: 143 EDGEGDLIMVGDVPWEIFLSAVKRLKITRVD 173
D EGD +MVGDVPWE+FLS V+RLKI+R +
Sbjct: 142 ADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 6/118 (5%)
Query: 59 HSWQPMQPDLSSS-QAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEH 117
W P++ L + + + D S FVKVYMEG+PIGRKL+L V +GY+ L++ L H
Sbjct: 46 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSH 105
Query: 118 MFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITRVDTF 175
MFDT+I+ G + + HVLTYED +GD +MVGD+PW++FL V+RLKITR + +
Sbjct: 106 MFDTSIICGN-----RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPERY 158
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 48 TQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSD---HNSFFVKVYMEGIPIGRKLNLLV 104
T + S ++ + P+L SQA N NS FVKV M+GIPIGRK++L
Sbjct: 97 TYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNA 156
Query: 105 HNGYQELVKTLEHMFDTTILWGT--EMDGVQSERCH---------VLTYEDGEGDLIMVG 153
H Y+ L TLE MF L E DG VLTYED EGD ++VG
Sbjct: 157 HKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVG 216
Query: 154 DVPWEIFLSAVKRLKITR 171
DVPW +F+ +V+RL+I +
Sbjct: 217 DVPWGMFIGSVRRLRIMK 234
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 48 TQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSD---HNSFFVKVYMEGIPIGRKLNLLV 104
T + S ++ + P+L SQA N NS FVKV M+GIPIGRK++L
Sbjct: 97 TYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNA 156
Query: 105 HNGYQELVKTLEHMFDTTILWGT--EMDGVQSERCH---------VLTYEDGEGDLIMVG 153
H Y+ L TLE MF L E DG VLTYED EGD ++VG
Sbjct: 157 HKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVG 216
Query: 154 DVPWEIFLSAVKRLKITR 171
DVPW +F+ +V+RL+I +
Sbjct: 217 DVPWGMFIGSVRRLRIMK 234
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 48 TQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSD---HNSFFVKVYMEGIPIGRKLNLLV 104
T + S ++ + P+L SQA N NS FVKV M+GIPIGRK++L
Sbjct: 97 TYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNA 156
Query: 105 HNGYQELVKTLEHMFDTTILWGT--EMDGVQSERCH---------VLTYEDGEGDLIMVG 153
H Y+ L TLE MF L E DG VLTYED EGD ++VG
Sbjct: 157 HKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVG 216
Query: 154 DVPWEIFLSAVKRLKITR 171
DVPW +F+ +V+RL+I +
Sbjct: 217 DVPWGMFIGSVRRLRIMK 234
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 85 FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYED 144
+VK+ MEG+PIGRK+NL +N YQ+L ++ +F W R + L YED
Sbjct: 81 LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLN-------RQYTLVYED 133
Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKITR 171
EGD ++VGDVPWE+F+S VKRL + +
Sbjct: 134 TEGDKVLVGDVPWEMFVSTVKRLHVLK 160
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
Query: 39 LRLGLGISTTQHVG--SSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPI 96
R L ++ +G S+TS G + + + D AA+ + FVK+ M G+PI
Sbjct: 106 FRKNLASGSSSKLGNDSTTSNGVTLKNQKCDA----AAKTTEPKRQGGMFVKINMYGVPI 161
Query: 97 GRKLNLLVHNGYQELVKTLEHMFDTTILWGTEM-DGVQSERC----------HVLTYEDG 145
GRK++L HN Y++L T++ +F + + ++ E+ + LTYED
Sbjct: 162 GRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDN 221
Query: 146 EGDLIMVGDVPWEIFLSAVKRLKITRV 172
EGD ++VGDVPW++F+S+VKRL++ +
Sbjct: 222 EGDKMLVGDVPWQMFVSSVKRLRVIKT 248
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 39 LRLGLGISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGR 98
R L +++ +G+ +S G ++ S E + FVK+ M+G+PIGR
Sbjct: 113 FRKNLASTSSSKLGNESSHGGQ-------INKSDDGEKQVETKKEGMFVKINMDGVPIGR 165
Query: 99 KLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHV-----------LTYEDGEG 147
K++L +N Y++L ++ +F + ++ Q E + LTYED EG
Sbjct: 166 KVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEG 225
Query: 148 DLIMVGDVPWEIFLSAVKRLKITRVD------TFGC 177
D ++VGDVPW++F+S+VKRL++ + TFGC
Sbjct: 226 DKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGC 261
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 61 WQPMQPDLSSSQAAEVNDCSDH--NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHM 118
W P++ ++ ++ N+ S+H +VKV M+G P RK++L + GY EL+K LE M
Sbjct: 68 WPPVRSYRKNNIQSKKNE-SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVM 126
Query: 119 FDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
F ++ E DG + V TYED +GD +++GDVPWE+F+ KRL+I +
Sbjct: 127 FKFSVGEYFERDGYKGSD-FVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMK 178
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 80 SDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHV 139
S+ +VKV M+G P RK++L ++ Y EL+K+LE+MF ++ E +G + V
Sbjct: 84 SEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSD-FV 142
Query: 140 LTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR---VDTFGC 177
TYED +GD ++VGDVPWE+F+S+ KRL+I + V GC
Sbjct: 143 PTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGC 183
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTEMDGVQSERC 137
F+KV M+G+ IGRK++L H+ Y+ L +TLE MF T + + +
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 138 HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
VLTYED EGD ++VGDVPW +F+++VKRL++ +
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMK 224
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTEMDGVQSERC 137
F+KV M+G+ IGRK++L H+ Y+ L +TLE MF T + + +
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 138 HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
VLTYED EGD ++VGDVPW +F+++VKRL++ +
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMK 223
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTEMDGVQSERC 137
F+KV M+G+ IGRK++L H+ Y+ L +TLE MF T + + +
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 138 HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
VLTYED EGD ++VGDVPW +F+++VKRL++ +
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMK 223
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 11/92 (11%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF----DTTILWGTE----MDGVQSERC 137
FVKV M+G+ IGRK+++ H+ Y+ L +TLE MF TT + +DG
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSD--- 182
Query: 138 HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
VLTYED EGD ++VGDVPW +F+++VKRL+I
Sbjct: 183 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 81 DHNSF-FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHV 139
++NS +VKV M+G P RK++L + Y EL+K LE+MF I E +G + V
Sbjct: 73 NNNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGS-GFV 131
Query: 140 LTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
TYED +GD ++VGDVPW++F S+ KRL+I +
Sbjct: 132 PTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMK 163
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 18/117 (15%)
Query: 75 EVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDT------------- 121
EV+ + FVKV M+G P RK++L + Y EL LE MF T
Sbjct: 207 EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAG 266
Query: 122 -TILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITRVDTFGC 177
+L T++ + + + +VLTYED +GD ++VGDVPWE+F+ K+LKI + GC
Sbjct: 267 KDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMK----GC 319
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 18/117 (15%)
Query: 75 EVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDT------------- 121
EV+ + FVKV M+G P RK++L + Y EL LE MF T
Sbjct: 207 EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAG 266
Query: 122 -TILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITRVDTFGC 177
+L T++ + + + +VLTYED +GD ++VGDVPWE+F+ K+LKI + GC
Sbjct: 267 KDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMK----GC 319
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDG 145
+VKV M+G P RK++L ++ Y EL+K LE+MF T+ +E +G + V TYED
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGS-GFVPTYEDK 134
Query: 146 EGDLIMVGDVPWEIFLSAVKRLKITR 171
+GD ++VGDVPW++F S+ ++L+I +
Sbjct: 135 DGDWMLVGDVPWDMFSSSCQKLRIMK 160
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 60 SWQPMQP-DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHM 118
S Q +P + S ++ AE + +VKV MEG P RK++L + Y EL LE M
Sbjct: 160 SSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKM 219
Query: 119 FDTTILW------GTEMDGVQSERC--------HVLTYEDGEGDLIMVGDVPWEIFLSAV 164
F + G DG+ R +V+TYED + D ++VGDVPWE+F+ +
Sbjct: 220 FSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSC 279
Query: 165 KRLKITR 171
K+L+I +
Sbjct: 280 KKLRIMK 286
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 61 WQPMQPDLSSSQAAEVNDCSDH-------NSFFVKVYMEGIPIGRKLNLLVHNGYQELVK 113
W P++ ++ A+ + +D FVKV M+G P RK++L + YQ+L
Sbjct: 169 WPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSS 228
Query: 114 TLEHMFDTTILWGTEMDGVQS-ERCH-------------VLTYEDGEGDLIMVGDVPWEI 159
LE MF L + G Q ER VLTYED +GD ++VGDVPWEI
Sbjct: 229 ALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEI 288
Query: 160 FLSAVKRLKITR 171
F ++LKI +
Sbjct: 289 FTETCQKLKIMK 300
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 61 WQPMQPDLSSSQAAEVNDCSDH-------NSFFVKVYMEGIPIGRKLNLLVHNGYQELVK 113
W P++ ++ A+ + +D FVKV M+G P RK++L + YQ+L
Sbjct: 169 WPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSS 228
Query: 114 TLEHMFDTTILWGTEMDGVQS-ERCH-------------VLTYEDGEGDLIMVGDVPWEI 159
LE MF L + G Q ER VLTYED +GD ++VGDVPWEI
Sbjct: 229 ALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEI 288
Query: 160 FLSAVKRLKITR 171
F ++LKI +
Sbjct: 289 FTETCQKLKIMK 300
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 61 WQPMQPDLSSSQAAEVNDCSDH-------NSFFVKVYMEGIPIGRKLNLLVHNGYQELVK 113
W P++ ++ A+ + +D FVKV M+G P RK++L + YQ+L
Sbjct: 169 WPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSS 228
Query: 114 TLEHMFDTTILWGTEMDGVQS-ERCH-------------VLTYEDGEGDLIMVGDVPWEI 159
LE MF L + G Q ER VLTYED +GD ++VGDVPWEI
Sbjct: 229 ALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEI 288
Query: 160 FLSAVKRLKITR 171
F ++LKI +
Sbjct: 289 FTETCQKLKIMK 300
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 61 WQPMQPDLSSSQAAEVNDCSDH-------NSFFVKVYMEGIPIGRKLNLLVHNGYQELVK 113
W P++ ++ A+ + +D FVKV M+G P RK++L + YQ+L
Sbjct: 186 WPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSS 245
Query: 114 TLEHMFDTTILWGTEMDGVQS-ERCH-------------VLTYEDGEGDLIMVGDVPWEI 159
LE MF L + G Q ER VLTYED +GD ++VGDVPWEI
Sbjct: 246 ALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEI 305
Query: 160 FLSAVKRLKITR 171
F ++LKI +
Sbjct: 306 FTETCQKLKIMK 317
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 66 PDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILW 125
P + S + + N+ + +VKV M+G+P RK++L N Y LV LE++F +
Sbjct: 75 PPVCSYRRKKNNEEASKAIGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGI- 133
Query: 126 GTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
G +G + E +++ YED + D ++VGDVPW++F + KRL+I +
Sbjct: 134 GVAKEGKKCE--YIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVK 177
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 80 SDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF----DTTILWGTEMDGVQSE 135
S S VKV M+G+ IGRK++L + Y L KTL+ MF T+ E
Sbjct: 147 SSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKE 206
Query: 136 RC----------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
C +++TY+D +GD ++VGDVPW++FL +V RL+I +
Sbjct: 207 TCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMK 252
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 46 STTQHVGSSTSRGHSWQPMQPDL--SSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLL 103
S T G G S + +Q ++ SS Q N+ +VKV M+G+ +GRK+ +L
Sbjct: 52 SQTTEFGGVIDLGLSLRTIQHEIYHSSGQRYCSNEGYRRKWGYVKVTMDGLVVGRKVCVL 111
Query: 104 VHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSA 163
H Y L LE MF + G + ++SE C L Y D EG GDVPW F+ +
Sbjct: 112 DHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFC--LVYRDEEGLWRNAGDVPWNEFIES 169
Query: 164 VKRLKITR 171
V+RL+ITR
Sbjct: 170 VERLRITR 177
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 70 SSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL--WGT 127
S +A E FVKV M+G P RK++L ++ Y++L L MF + + +G
Sbjct: 96 SGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGA 155
Query: 128 E-----------MDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
+ MD + S +V +YED +GD ++VGDVPW +F+ + KRL+I +
Sbjct: 156 QGMIDFMNESKVMDLLNSSE-YVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMK 209
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDG 145
+VKV M+G+P RK++L GY +L L+ +F + DG E +V YED
Sbjct: 98 YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCE--YVTIYEDK 155
Query: 146 EGDLIMVGDVPWEIFLSAVKRLKITR 171
+GD ++ GDVPW +FL + KRL+I +
Sbjct: 156 DGDWMLAGDVPWGMFLESCKRLRIMK 181
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 12/98 (12%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL--WGTE--MDGVQSERC---- 137
VKV M+G P RK++L ++ YQ+L L MF + + +G + +D + +
Sbjct: 126 LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLL 185
Query: 138 ----HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
+V +YED +GD ++VGDVPWE+F+ + KRL+I +
Sbjct: 186 NSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 223
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQ------------ 133
+VKV M+G P RK++L ++ YQ+L L MF + + G++
Sbjct: 120 YVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLL 179
Query: 134 SERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
+ +V TYED +GD ++VGDVPWE+F+ + KR++I +
Sbjct: 180 NGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMK 217
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 37 TDLRLGLGISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEV--------------NDCSDH 82
T+LRLGL S + + + ++ DL A + N
Sbjct: 13 TELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERT 72
Query: 83 NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTY 142
S +VKV ++G RK++L ++ YQ+L L+ +F I + D ++ C V Y
Sbjct: 73 KSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFD---DTLKESEC-VPIY 128
Query: 143 EDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
ED +GD ++ GDVPWE+FL + KRL+I +
Sbjct: 129 EDKDGDWMLAGDVPWEMFLGSCKRLRIMK 157
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILW---GTE-----------MDG 131
FVKV M+G P RK++L ++ Y EL L +MF + + G E MD
Sbjct: 112 FVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDL 171
Query: 132 VQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
V S +V +YED +GD ++VGDVPW +F+ KRL++ +
Sbjct: 172 VNSWD-YVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMK 210
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFD--TTILWGTEMDGVQSERCHVLTYE 143
+VKV ++G RK++L +++ Y +L LE+MF TI TE+ + + V TYE
Sbjct: 88 YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTEL---ERKGEFVATYE 144
Query: 144 DGEGDLIMVGDVPWEIFLSAVKRLKITR 171
D +GDL++VGDVPW +F+ + KR+++ +
Sbjct: 145 DKDGDLMLVGDVPWMMFVESCKRMRLMK 172
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 88 KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEG 147
KV M+G+P+GR ++L GY EL+ +E +FD ++S + + D EG
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIK-------GELRSRNQWEIVFTDDEG 577
Query: 148 DLIMVGDVPWEIFLSAVKRLKI 169
D+++VGD PW F + VKR+ I
Sbjct: 578 DMMLVGDDPWPEFCNMVKRIFI 599
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 88 KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEG 147
KV M+G+P+GR ++L GY EL+ +E +FD ++S + + D EG
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIK-------GELRSRNQWEIVFTDDEG 579
Query: 148 DLIMVGDVPWEIFLSAVKRLKI 169
D+++VGD PW F + VKR+ I
Sbjct: 580 DMMLVGDDPWPEFCNMVKRIFI 601
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDG 145
+VKV ++G+ +GRK+ L+ Y L L MF + G + Q+E L Y D
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVSGLRL--FQTESEFSLVYRDR 157
Query: 146 EGDLIMVGDVPWEIFLSAVKRLKITR 171
EG VGDVPW+ F+ +V R++I R
Sbjct: 158 EGIWRNVGDVPWKEFVESVDRMRIAR 183
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERC-HVLTYED 144
+VKV M+G+ I RK+++ + N Y+ L +L MF TE + E + T++
Sbjct: 161 YVKVKMDGVAIARKVDIKLFNSYESLTNSLITMF-------TEYEDCDREDTNYTFTFQG 213
Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKITR 171
EGD ++ GDV W+IF +V R+ I R
Sbjct: 214 KEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 45 ISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
IS ++ ST++ P+ S+S + S + +KV M+G +GR ++L +
Sbjct: 371 ISVDSNISDSTTKCQ-----DPNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTL 423
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDGVQSERCH-VLTYEDGEGDLIMVGDVPWEIFLSA 163
Y EL+K LE MF E++G S + + + D EGD ++VGD PW F
Sbjct: 424 LRSYDELIKELEKMF--------EIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKM 475
Query: 164 VKRLKITRVD 173
K+L I D
Sbjct: 476 AKKLFIYPSD 485
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 45 ISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
IS ++ ST++ P+ S+S + S + +KV M+G +GR ++L +
Sbjct: 479 ISVDSNISDSTTKCQD-----PNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTL 531
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDGVQSERCH-VLTYEDGEGDLIMVGDVPWEIFLSA 163
Y EL+K LE MF E++G S + + + D EGD ++VGD PW F
Sbjct: 532 LRSYDELIKELEKMF--------EIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKM 583
Query: 164 VKRLKITRVD 173
K+L I D
Sbjct: 584 AKKLFIYPSD 593
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 45 ISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
IS ++ ST++ P+ S+S + S + +KV M+G +GR ++L +
Sbjct: 458 ISVDSNISDSTTKCQ-----DPNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTL 510
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDGVQSERCH-VLTYEDGEGDLIMVGDVPWEIFLSA 163
Y EL+K LE MF E++G S + + + D EGD ++VGD PW F
Sbjct: 511 LRSYDELIKELEKMF--------EIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKM 562
Query: 164 VKRLKITRVD 173
K+L I D
Sbjct: 563 AKKLFIYPSD 572
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 71 SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
SQ+ ++ C+ KV+M+G +GR ++L Y++L K LE MFD + +
Sbjct: 531 SQSRQIRSCT-------KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD------IKGE 577
Query: 131 GVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
++S + + Y D E D++MVGD PW F V+++ I
Sbjct: 578 LLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 616
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 71 SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
SQ+ ++ C+ KV+M+G +GR ++L Y++L K LE MFD + +
Sbjct: 536 SQSRQIRSCT-------KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD------IKGE 582
Query: 131 GVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
++S + + Y D E D++MVGD PW F V+++ I
Sbjct: 583 LLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 71 SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
SQ+ ++ C+ KV+M+G +GR ++L Y++L K LE MFD + +
Sbjct: 533 SQSRQIRSCT-------KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD------IKGE 579
Query: 131 GVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
++S + + Y D E D++MVGD PW F V+++ I
Sbjct: 580 LLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 618
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 71 SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
SQ+ ++ C+ KV+M+G +GR ++L Y++L K LE MFD + +
Sbjct: 536 SQSRQIRSCT-------KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD------IKGE 582
Query: 131 GVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
++S + + Y D E D++MVGD PW F V+++ I
Sbjct: 583 LLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33 |
chr5:23270024-23270959 FORWARD LENGTH=171
Length = 171
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 91 MEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLI 150
+EG I ++++L H YQ L L MF ++D + H++ YED E DL+
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDDLDLSNAIPGHLIAYEDMENDLL 138
Query: 151 MVGDVPWEIFLSAVKRLKITRV 172
+ GD+ W+ F+ KR++I V
Sbjct: 139 LAGDLTWKDFVRVAKRIRILPV 160
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL--WGTE--MDGVQSERC---- 137
VKV M+G P RK++L ++ YQ+L L MF + + +G + +D + +
Sbjct: 126 LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLL 185
Query: 138 ----HVLTYEDGEGDLIMVGDVPWE 158
+V +YED +GD ++VGDVPWE
Sbjct: 186 NSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 88 KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEG 147
KV M+G+ IGR ++L V NGY +L+ LE +FD +Q+ + + D +
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK-------GQLQTRNQWEIAFTDSDE 567
Query: 148 DLIMVGDVPWEIFLSAVKRLKITR 171
D ++VGD PW F + VK++ I +
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFIQK 591
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 88 KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCH-VLTYEDGE 146
KV M+GI +GR ++L + Y EL+ LE MF E+ G R ++ + D E
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMF--------EIQGQLLARDKWIVVFTDDE 544
Query: 147 GDLIMVGDVPWEIFLSAVKRLKITRVD 173
GD+++ GD PW F K++ I D
Sbjct: 545 GDMMLAGDDPWNEFCKMAKKIFIYSSD 571
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 47 TTQHVGSSTSRGHSWQ--PMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
+ Q GS ++ H Q P Q + + A+ S + KV+ +GI +GR ++L
Sbjct: 696 SDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC--TKVHKQGIALGRSVDLSK 753
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDG--VQSERCHVLTYEDGEGDLIMVGDVPWEIFLS 162
Y+ELV L+ +F E +G + ++ ++ Y D E D+++VGD PW+ F
Sbjct: 754 FQNYEELVAELDRLF--------EFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 163 AVKRLKI 169
V+++ I
Sbjct: 806 MVRKIFI 812
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 47 TTQHVGSSTSRGHSWQ--PMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
+ Q GS ++ H Q P Q + + A+ S + KV+ +GI +GR ++L
Sbjct: 696 SDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC--TKVHKQGIALGRSVDLSK 753
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDG--VQSERCHVLTYEDGEGDLIMVGDVPWEIFLS 162
Y+ELV L+ +F E +G + ++ ++ Y D E D+++VGD PW+ F
Sbjct: 754 FQNYEELVAELDRLF--------EFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 163 AVKRLKI 169
V+++ I
Sbjct: 806 MVRKIFI 812
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 47 TTQHVGSSTSRGHSWQ--PMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
+ Q GS ++ H Q P Q + + A+ S + KV+ +GI +GR ++L
Sbjct: 696 SDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC--TKVHKQGIALGRSVDLSK 753
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDG--VQSERCHVLTYEDGEGDLIMVGDVPWEIFLS 162
Y+ELV L+ +F E +G + ++ ++ Y D E D+++VGD PW+ F
Sbjct: 754 FQNYEELVAELDRLF--------EFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 163 AVKRLKI 169
V+++ I
Sbjct: 806 MVRKIFI 812
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 47 TTQHVGSSTSRGHSWQ--PMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLV 104
+ Q GS ++ H Q P Q + + A+ S + KV+ +GI +GR ++L
Sbjct: 696 SDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC--TKVHKQGIALGRSVDLSK 753
Query: 105 HNGYQELVKTLEHMFDTTILWGTEMDG--VQSERCHVLTYEDGEGDLIMVGDVPWEIFLS 162
Y+ELV L+ +F E +G + ++ ++ Y D E D+++VGD PW+ F
Sbjct: 754 FQNYEELVAELDRLF--------EFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 163 AVKRLKI 169
V+++ I
Sbjct: 806 MVRKIFI 812
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 67 DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWG 126
++ S Q C+ KV M+G+ IGR ++L V NGY +L+ LE +FD L G
Sbjct: 485 EIQSKQFGSTRTCT-------KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD---LKG 534
Query: 127 TEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
+Q+ + + D +G ++VGD PW F VK++ I
Sbjct: 535 Q----LQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 573
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 67 DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWG 126
++ S Q + C+ KV M+G+ IGR ++L V NGY +L+ LE +FD
Sbjct: 501 EIQSKQFSSSRTCT-------KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK---- 549
Query: 127 TEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
+Q+ + + D +G ++VGD PW F VK++ I
Sbjct: 550 ---GQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 589
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 67 DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWG 126
++ S Q + C+ KV M+G+ IGR ++L V NGY +L+ LE +FD L G
Sbjct: 500 EIQSKQFSSTRTCT-------KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD---LKG 549
Query: 127 TEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
+Q+ + + + E D ++VG+ PW F + VK++ I
Sbjct: 550 Q----LQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFI 588
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 68 LSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGT 127
+ S Q + C+ KV M+G+ IGR ++L V NGY +L+ LE +FD L G
Sbjct: 507 IQSKQFSSTRTCT-------KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD---LKGQ 556
Query: 128 EMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
+Q+ + + + D ++VGD PW F + VKR+ I +
Sbjct: 557 ----LQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYIQK 596
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 62 QPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDT 121
QP + D+++ C KV+M+G+ I R ++L +GY +L++ LE +FD
Sbjct: 414 QPRKEDITTEATTS---CLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDL 470
Query: 122 TILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
D +++ + + + EG ++VGD PW F + KR+ I
Sbjct: 471 K-------DELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFI 511
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 67 DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWG 126
++ S Q + C+ KV M+G+ I R ++L V NGY +L+ LE +FD L G
Sbjct: 499 EIQSKQFSSTRTCT-------KVQMQGVTIERAVDLSVLNGYDQLILELEELFD---LKG 548
Query: 127 TEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
+Q+ + + D + D ++VGD PW F + VK++ I +
Sbjct: 549 Q----LQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFK 589
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 29/117 (24%)
Query: 56 SRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTL 115
+RG +W S Q E C KV+ME +GR L+L V YQEL + L
Sbjct: 566 ARGLTWN------YSLQGLETGHC--------KVFMESEDVGRTLDLSVIGSYQELYRKL 611
Query: 116 EHMFDTTILWGTEMDGVQSERCHVLT---YEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
MF ER +LT Y D G + +GD P+ F+ A KRL I
Sbjct: 612 AEMFHI------------EERSDLLTHVVYRDANGVIKRIGDEPFSDFMKATKRLTI 656
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 86 FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDG 145
+ KV G +GR +++ ++GY EL L MF + G D + S+ L Y D
Sbjct: 960 YTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFG---IEGQLEDPLTSD--WKLVYTDH 1013
Query: 146 EGDLIMVGDVPWEIFLSAVKRLKI 169
E D+++VGD PWE F++ V+ +KI
Sbjct: 1014 ENDILLVGDDPWEEFVNCVQNIKI 1037
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 73 AAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGV 132
A ++N S+ FVKVY G +GR L++ + Y EL + L MF + G D +
Sbjct: 695 AGQIN-SSNQTKNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMF---AIEGLLEDPL 749
Query: 133 QSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
+S L + D E D++++GD PWE F++ V +KI
Sbjct: 750 RS--GWQLVFVDKENDILLLGDDPWESFVNNVWYIKI 784
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 63 PMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTT 122
P++ S Q++ C+ KV+ +G +GR ++L NGY +L+ LE +F+
Sbjct: 651 PVETPASKPQSSSKRICT-------KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFN-- 701
Query: 123 ILWGTEMDGV--QSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
M+G+ E+ + Y D E D+++VGD PW F + V ++ +
Sbjct: 702 ------MEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHL 744
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 67 DLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWG 126
D S + +V+D S + KV+ME +GR L+L V Y+EL + L MF
Sbjct: 567 DEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---- 622
Query: 127 TEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
+SE + Y D G + G+ P+ FL +RL I
Sbjct: 623 ------KSEMLSSVLYRDASGAIKYAGNEPFSEFLKTARRLTI 659