Miyakogusa Predicted Gene

Lj0g3v0276659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276659.1 tr|A0YX99|A0YX99_LYNSP Protoporphyrinogen oxidase
OS=Lyngbya sp. (strain PCC 8106) GN=L8106_12215
PE,37.82,5e-19,Amino_oxidase,Amine oxidase; FAD-linked reductases,
C-terminal domain,NULL; no description,NULL; pro,CUFF.18363.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01690.2 | Symbols: PPOX | Flavin containing amine oxidoreduc...   174   2e-44
AT4G01690.1 | Symbols: PPOX, HEMG1, PPO1 | Flavin containing ami...   174   2e-44

>AT4G01690.2 | Symbols: PPOX | Flavin containing amine
           oxidoreductase family | chr4:729929-732309 FORWARD
           LENGTH=506
          Length = 506

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 99/120 (82%)

Query: 1   MLPNAISARLGNXXXXXXXXXXXXXXXXGGYSLTYETPEGVVSLQSKTVVMTIPSHIANT 60
           MLP AISARLG+                GGY+LTYETP+G+VS+QSK+VVMT+PSH+A+ 
Sbjct: 285 MLPEAISARLGSKVKLSWKLSGITKLESGGYNLTYETPDGLVSVQSKSVVMTVPSHVASG 344

Query: 61  LLRPVSPAAADALSKFHYPPVAAVSISYPKEDIRSECLIDGELKGFGQLHPRSQGVETLG 120
           LLRP+S +AA+ALSK +YPPVAAVSISYPKE IR+ECLIDGELKGFGQLHPR+QGVETLG
Sbjct: 345 LLRPLSESAANALSKLYYPPVAAVSISYPKEAIRTECLIDGELKGFGQLHPRTQGVETLG 404


>AT4G01690.1 | Symbols: PPOX, HEMG1, PPO1 | Flavin containing amine
           oxidoreductase family | chr4:729929-732309 FORWARD
           LENGTH=537
          Length = 537

 Score =  174 bits (440), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 99/120 (82%)

Query: 1   MLPNAISARLGNXXXXXXXXXXXXXXXXGGYSLTYETPEGVVSLQSKTVVMTIPSHIANT 60
           MLP AISARLG+                GGY+LTYETP+G+VS+QSK+VVMT+PSH+A+ 
Sbjct: 285 MLPEAISARLGSKVKLSWKLSGITKLESGGYNLTYETPDGLVSVQSKSVVMTVPSHVASG 344

Query: 61  LLRPVSPAAADALSKFHYPPVAAVSISYPKEDIRSECLIDGELKGFGQLHPRSQGVETLG 120
           LLRP+S +AA+ALSK +YPPVAAVSISYPKE IR+ECLIDGELKGFGQLHPR+QGVETLG
Sbjct: 345 LLRPLSESAANALSKLYYPPVAAVSISYPKEAIRTECLIDGELKGFGQLHPRTQGVETLG 404