Miyakogusa Predicted Gene
- Lj0g3v0276649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0276649.1 Non Chatacterized Hit- tr|I1LAU3|I1LAU3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,57.58,0,coiled-coil,NULL; seg,NULL,CUFF.18356.1
(818 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46980.2 | Symbols: | unknown protein; Has 3995 Blast hits t... 174 3e-43
AT2G46980.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 169 5e-42
AT2G46980.1 | Symbols: | unknown protein; Has 1165 Blast hits t... 94 3e-19
>AT2G46980.2 | Symbols: | unknown protein; Has 3995 Blast hits to
3325 proteins in 374 species: Archae - 19; Bacteria -
205; Metazoa - 2201; Fungi - 364; Plants - 149; Viruses
- 22; Other Eukaryotes - 1035 (source: NCBI BLink). |
chr2:19299868-19303429 REVERSE LENGTH=793
Length = 793
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 203/384 (52%), Gaps = 40/384 (10%)
Query: 452 VSENEKQQESRSSPIKQNVAKSQDEFQSPTFQFXXXXXXXXXXXXXXXXXXANDASSPAS 511
+S+N + E S+ ++ + ++EFQSPTF + SP
Sbjct: 421 LSKNGDKHERPSNIFREKSVEPENEFQSPTFGYKAPISSPSPCCSPEASPLQPRNISPTL 480
Query: 512 TDKR---FSLGSIRNLR--TFQALE-----PDFNGLREPKLSSDMEELKNSSPRXXXXXX 561
+ FS G+ + + T QA + PDF L + + D + SSP
Sbjct: 481 DETETPIFSFGTKKTSQGTTGQASDTEKRLPDF--LEKKR---DYSFRRESSPEPNEDLV 535
Query: 562 XXXXXQDGLSDSSSEEMNFKGS--------HHQGSRVRRSA----ERKSFTLHPIKRLRN 609
LSD SS+E + GS H+ R +A ER +KR N
Sbjct: 536 --------LSDPSSDERDSDGSREDSPVLGHNISPEERETANWTNERSMLGPSSVKRNSN 587
Query: 610 HEGIKFHDTSPAS--SKGTGASDWIDGASEQNQD---GFVRAVELFAXXXXXXXXXXXXM 664
+GI SP S SKG +D SE ++D G RAV LFA
Sbjct: 588 LKGIGRVVLSPPSPLSKGIDKTDSFQHCSEMDEDEDEGLGRAVALFAMALQNFERKLKSA 647
Query: 665 TNQKSSEILKSVAEEIHLQLQDVHSQIQTDIGKLTNIGKSKRKRLETRFEDQQKQLRSIY 724
+KSSEI+ SV+EEIHL+L+++ S I T+ GK +N+ K+KRK ETR ++Q++++R I+
Sbjct: 648 AEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLAKTKRKHAETRLQEQEEKMRMIH 707
Query: 725 DRFKEEVTLHLQDCRSTVEDLEADQIEIKGTLEKQRVAHKKLLSKVEEAVDIQLNDAQRK 784
++FK++V+ HL+D +ST+E+LEA+Q E+KG+++KQR +H+KL++ E ++ +L+DA ++
Sbjct: 708 EKFKDDVSHHLEDFKSTIEELEANQSELKGSIKKQRTSHQKLIAHFEGGIETKLDDATKR 767
Query: 785 ITATQEMARGKLLQLKQVITMCLK 808
I + + ARGK+LQLK ++ CL+
Sbjct: 768 IDSVNKSARGKMLQLKMIVAECLR 791
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 18/288 (6%)
Query: 15 SDCRSFGSNVHQSSQSRKISIGIMVDSNARARCGAVKGDGAVVSNSERV-TFNVGNF-AG 72
SD RSFGSN H SSQSRKISIG+M DS + K DG V++ E++ + V A
Sbjct: 2 SDYRSFGSNYHPSSQSRKISIGVMADSQPKRNLVPDKDDGDVIARVEKLKSATVTELQAN 61
Query: 73 EKSKVEGVTASANMKEIGGAKGVEHSWVS-KSFYQKTPTSETILQANETSNLLVSHGGRD 131
+K K + N ++ G V W S +S ++K T E++L +TS+L S G
Sbjct: 62 KKEKSDLAAKQRNSAQVTGH--VTSPWRSPRSSHRKLGTLESVL-CKQTSSLSGSKGLNK 118
Query: 132 KPDGIKCAAEKQSVQFFSYQTSNFPSDNYKKFDGESSKRKGRNDETPE---ERVEEFTFT 188
G+ A + + + F + P + + +G GRND + ER+EE
Sbjct: 119 ---GLNGAHQTPARESFQNCPISSPQHSLGELNG------GRNDRVMDRSPERMEEPPSA 169
Query: 189 TAPGVVESDKTKAEDKVNRTDNSTENLRMKLCQILGTTSSPKTQDSGSHTRKMDEESSPI 248
V S + K + T+ +T+ LR KL +ILG S +D S T ++++ + +
Sbjct: 170 VLQQKVASQREKMDKPGKETNGTTDVLRSKLWEILGKASPANNEDVNSETPEVEKTNFKL 229
Query: 249 KLRVNQKEHKFAKNIQNSDPIETDSENSGQTRERPVTRSRTRKKASSQ 296
+ K NSD IETDSE+ RPVTRS +++ ++
Sbjct: 230 SQDKGSNDDPLIKPRHNSDSIETDSESPENATRRPVTRSLLQRRVGAK 277
>AT2G46980.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown. | chr2:19299868-19303429
REVERSE LENGTH=790
Length = 790
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 203/384 (52%), Gaps = 43/384 (11%)
Query: 452 VSENEKQQESRSSPIKQNVAKSQDEFQSPTFQFXXXXXXXXXXXXXXXXXXANDASSPAS 511
+S+N + E S+ ++ + ++EFQSPTF + SP
Sbjct: 421 LSKNGDKHERPSNIFREKSVEPENEFQSPTFGYKAPISSPSPCCSPEASPLQPRNISPTL 480
Query: 512 TDKR---FSLGSIRNLR--TFQALE-----PDFNGLREPKLSSDMEELKNSSPRXXXXXX 561
+ FS G+ + + T QA + PDF L + + D + SSP
Sbjct: 481 DETETPIFSFGTKKTSQGTTGQASDTEKRLPDF--LEKKR---DYSFRRESSPEPNEDLV 535
Query: 562 XXXXXQDGLSDSSSEEMNFKGS--------HHQGSRVRRSA----ERKSFTLHPIKRLRN 609
LSD SS+E + GS H+ R +A ER +KR N
Sbjct: 536 --------LSDPSSDERDSDGSREDSPVLGHNISPEERETANWTNERSMLGPSSVKRNSN 587
Query: 610 HEGIKFHDTSPAS--SKGTGASDWIDGASEQNQD---GFVRAVELFAXXXXXXXXXXXXM 664
+GI SP S SKG +D SE ++D G RAV LFA
Sbjct: 588 LKGIGRVVLSPPSPLSKGIDKTDSFQHCSEMDEDEDEGLGRAVALFAMALQNFERKLKSA 647
Query: 665 TNQKSSEILKSVAEEIHLQLQDVHSQIQTDIGKLTNIGKSKRKRLETRFEDQQKQLRSIY 724
+KSSEI+ SV+EEIHL+L+++ S I T+ GK +N+ K+KRK ETR ++Q++++R I+
Sbjct: 648 AEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLAKTKRKHAETRLQEQEEKMRMIH 707
Query: 725 DRFKEEVTLHLQDCRSTVEDLEADQIEIKGTLEKQRVAHKKLLSKVEEAVDIQLNDAQRK 784
++FK++V+ HL+D +ST+E+LEA+Q E+KG+++KQR +H+KL++ E ++ +L+DA ++
Sbjct: 708 EKFKDDVSHHLEDFKSTIEELEANQSELKGSIKKQRTSHQKLIAHFEGGIETKLDDATKR 767
Query: 785 ITATQEMARGKLLQLKQVITMCLK 808
I ++ ARGK+LQLK ++ CL+
Sbjct: 768 IDSS---ARGKMLQLKMIVAECLR 788
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 18/288 (6%)
Query: 15 SDCRSFGSNVHQSSQSRKISIGIMVDSNARARCGAVKGDGAVVSNSERV-TFNVGNF-AG 72
SD RSFGSN H SSQSRKISIG+M DS + K DG V++ E++ + V A
Sbjct: 2 SDYRSFGSNYHPSSQSRKISIGVMADSQPKRNLVPDKDDGDVIARVEKLKSATVTELQAN 61
Query: 73 EKSKVEGVTASANMKEIGGAKGVEHSWVS-KSFYQKTPTSETILQANETSNLLVSHGGRD 131
+K K + N ++ G V W S +S ++K T E++L +TS+L S G
Sbjct: 62 KKEKSDLAAKQRNSAQVTGH--VTSPWRSPRSSHRKLGTLESVL-CKQTSSLSGSKGLNK 118
Query: 132 KPDGIKCAAEKQSVQFFSYQTSNFPSDNYKKFDGESSKRKGRNDETPE---ERVEEFTFT 188
G+ A + + + F + P + + +G GRND + ER+EE
Sbjct: 119 ---GLNGAHQTPARESFQNCPISSPQHSLGELNG------GRNDRVMDRSPERMEEPPSA 169
Query: 189 TAPGVVESDKTKAEDKVNRTDNSTENLRMKLCQILGTTSSPKTQDSGSHTRKMDEESSPI 248
V S + K + T+ +T+ LR KL +ILG S +D S T ++++ + +
Sbjct: 170 VLQQKVASQREKMDKPGKETNGTTDVLRSKLWEILGKASPANNEDVNSETPEVEKTNFKL 229
Query: 249 KLRVNQKEHKFAKNIQNSDPIETDSENSGQTRERPVTRSRTRKKASSQ 296
+ K NSD IETDSE+ RPVTRS +++ ++
Sbjct: 230 SQDKGSNDDPLIKPRHNSDSIETDSESPENATRRPVTRSLLQRRVGAK 277
>AT2G46980.1 | Symbols: | unknown protein; Has 1165 Blast hits to
947 proteins in 158 species: Archae - 0; Bacteria - 33;
Metazoa - 631; Fungi - 90; Plants - 54; Viruses - 14;
Other Eukaryotes - 343 (source: NCBI BLink). |
chr2:19301879-19303429 REVERSE LENGTH=516
Length = 516
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 18/279 (6%)
Query: 15 SDCRSFGSNVHQSSQSRKISIGIMVDSNARARCGAVKGDGAVVSNSERV-TFNVGNF-AG 72
SD RSFGSN H SSQSRKISIG+M DS + K DG V++ E++ + V A
Sbjct: 2 SDYRSFGSNYHPSSQSRKISIGVMADSQPKRNLVPDKDDGDVIARVEKLKSATVTELQAN 61
Query: 73 EKSKVEGVTASANMKEIGGAKGVEHSWVS-KSFYQKTPTSETILQANETSNLLVSHGGRD 131
+K K + N ++ G V W S +S ++K T E++L +TS+L S G
Sbjct: 62 KKEKSDLAAKQRNSAQVTGH--VTSPWRSPRSSHRKLGTLESVL-CKQTSSLSGSKGLNK 118
Query: 132 KPDGIKCAAEKQSVQFFSYQTSNFPSDNYKKFDGESSKRKGRNDETPE---ERVEEFTFT 188
G+ A + + + F + P + + +G GRND + ER+EE
Sbjct: 119 ---GLNGAHQTPARESFQNCPISSPQHSLGELNG------GRNDRVMDRSPERMEEPPSA 169
Query: 189 TAPGVVESDKTKAEDKVNRTDNSTENLRMKLCQILGTTSSPKTQDSGSHTRKMDEESSPI 248
V S + K + T+ +T+ LR KL +ILG S +D S T ++++ + +
Sbjct: 170 VLQQKVASQREKMDKPGKETNGTTDVLRSKLWEILGKASPANNEDVNSETPEVEKTNFKL 229
Query: 249 KLRVNQKEHKFAKNIQNSDPIETDSENSGQTRERPVTRS 287
+ K NSD IETDSE+ RPVTRS
Sbjct: 230 SQDKGSNDDPLIKPRHNSDSIETDSESPENATRRPVTRS 268