Miyakogusa Predicted Gene

Lj0g3v0274919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0274919.1 tr|G7JX88|G7JX88_MEDTR COSII OS=Medicago
truncatula GN=MTR_5g057670 PE=2 SV=1,90.05,0,seg,NULL; DUF1218,Protein
of unknown function DUF1218; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NU,CUFF.18451.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) ...   230   4e-61
AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) ...   139   1e-33
AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) ...   130   5e-31
AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) ...   129   1e-30
AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) ...   121   2e-28
AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) ...   112   1e-25
AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) ...    48   4e-06
AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) ...    48   5e-06

>AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:4589218-4590362 REVERSE LENGTH=188
          Length = 188

 Score =  230 bits (587), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 131/191 (68%), Gaps = 3/191 (1%)

Query: 1   MAEGRGSTXXXXXXXXXXXXXXXXXXXXERRRSVGTMYQVEGKNETYCVYSSDVATGYGV 60
           M EG+ ST                    ERRRS+G   Q    N T+CVY SDVATGYGV
Sbjct: 1   MGEGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGV 60

Query: 61  GAXXXXXXXXXXXMGVTKCMCFGRPLTPGGNRAWSIIYFMSSWATFLVAESCLIAGATKN 120
           GA           M VTKCMCFGRPL PG +RAWSIIYF+SSW TFLVAE+C+IAGATKN
Sbjct: 61  GAFLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKN 120

Query: 121 AYHTKYRGMIYAQNFSCESLRKGIFVTAAVFIVATMILNVYYYMYFTKATTTPLSQKANR 180
           AYHTKY   + +Q FSC SLRKGIF+  AVFIVATM+LNVYYYMYFTK+ ++P + KANR
Sbjct: 121 AYHTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANR 177

Query: 181 VSSTVGMTGYA 191
            SS +GM GYA
Sbjct: 178 SSSNIGMAGYA 188


>AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:13723903-13724872 FORWARD LENGTH=173
          Length = 173

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 88/147 (59%)

Query: 29  ERRRSVGTMYQVEGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTP 88
           E+RRS   + Q       YCVY SD ATGYGVGA           M V++C C G+PL P
Sbjct: 25  EQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVASQILIMLVSRCFCCGKPLKP 84

Query: 89  GGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVTA 148
           GG+RA ++I F+ SW  FL+AE CL+AG+ +NAYHTKYR M       C++LRKG+F   
Sbjct: 85  GGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRTMFMDNPPDCQTLRKGVFAAG 144

Query: 149 AVFIVATMILNVYYYMYFTKATTTPLS 175
           A F+    I++ +YY ++  A    LS
Sbjct: 145 ASFVFFNAIVSQFYYFFYFSAAEASLS 171


>AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:22490430-22491330 REVERSE LENGTH=180
          Length = 180

 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 96/158 (60%), Gaps = 6/158 (3%)

Query: 29  ERRRSVGTMYQV--EGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPL 86
           E+RR   T +Q+  E ++ +YCVY  D+ATG GVG+           M  ++C+C GR L
Sbjct: 25  EQRR---TTWQISRESRDLSYCVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRAL 81

Query: 87  TPGGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFV 146
           TP G+R+W+I  F+++W  F +A+ CL+AG+ +NAYHTKYR      + SC SLRKG+F 
Sbjct: 82  TPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFG 141

Query: 147 TAAVFIVATMILNVYYYMYFTKATT-TPLSQKANRVSS 183
             A FIV T I++  YY+  ++A    P      R+SS
Sbjct: 142 AGAAFIVLTGIVSELYYVTLSRAKDFQPSRDPGIRMSS 179


>AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr3:5226489-5227666 REVERSE LENGTH=175
          Length = 175

 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 1/142 (0%)

Query: 29  ERRRSVGTMYQVEGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTP 88
           E+RRSVG +     K   YCVY +D+AT YG GA           M  ++C C G+ L P
Sbjct: 25  EQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVSQVLIMAASRCFCCGKSLNP 84

Query: 89  GGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQN-FSCESLRKGIFVT 147
           GG+RA +II F+  W  FL+AE CL+A + +NAYHT+YR M   ++  SCE +RKG+F  
Sbjct: 85  GGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEVIRKGVFAA 144

Query: 148 AAVFIVATMILNVYYYMYFTKA 169
            A F + T I++ +YY+ +++A
Sbjct: 145 GAAFTLFTAIVSQFYYVCYSRA 166


>AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:19708114-19709128 FORWARD LENGTH=175
          Length = 175

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)

Query: 29  ERRRSVGTMYQVEGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTP 88
           E+RRSVG +     K   +C Y SD+AT YG GA           M  ++C C G+ L P
Sbjct: 25  EQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFISQVIIMVASRCFCCGKALKP 84

Query: 89  GGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQN-FSCESLRKGIFVT 147
           GG+RA  I+ F+  W  FL+AE CL+AG+ +NAYHT YR M   +N  SCE +RKG+F  
Sbjct: 85  GGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEVIRKGVFAA 144

Query: 148 AAVFIVATMILNVYYYMYFTKA 169
            A F + T I++ +YY+ +++A
Sbjct: 145 GASFALFTAIVSQFYYISYSRA 166


>AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:25570322-25571562 FORWARD LENGTH=201
          Length = 201

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 2/161 (1%)

Query: 29  ERRRSVGTMYQVEGKNETYCVYSSDVATGYGVGAXXXXXXXXXXXMGVTKCMCFGRPLTP 88
           ERRRS       +   +T C Y ++ +T YG+ A            GVTKC+CFG+ L  
Sbjct: 26  ERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVSQAVVNGVTKCLCFGKGLVT 85

Query: 89  GGN-RAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCESLRKGIFVT 147
           G +   W+I++F+ SW +FL AE+CL+ G+ +NAYHTK  G+   +  SC  L  G+F  
Sbjct: 86  GTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEGIYKGKELSCAVLPVGVFAA 145

Query: 148 AAVFIVATMILNVYYYMYFTKATTTPLSQKANRVSSTVGMT 188
            A F + ++I  + YY+  +KA T    +  N     +GMT
Sbjct: 146 GAAFTLMSLIATILYYLAHSKADTGGWEKHQND-GINIGMT 185


>AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656519-5657970 FORWARD LENGTH=209
          Length = 209

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 79  CMCFGR-PLTPGGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSC 137
           C C  + P     N   S+I F+ SW TF++A   L++GA  N  HT+    + A  + C
Sbjct: 78  CFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEES--MNAGTYFC 135

Query: 138 ESLRKGIFVTAAVFIVATMILNVYYYMYFT 167
             ++ G+F T AV  + T+ L + YY+  T
Sbjct: 136 YIVKPGVFSTGAVLSLVTIALGIVYYLCLT 165


>AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656700-5657970 FORWARD LENGTH=175
          Length = 175

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 79  CMCFGR-PLTPGGNRAWSIIYFMSSWATFLVAESCLIAGATKNAYHTKYRGMIYAQNFSC 137
           C C  + P     N   S+I F+ SW TF++A   L++GA  N  HT+    + A  + C
Sbjct: 44  CFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEES--MNAGTYFC 101

Query: 138 ESLRKGIFVTAAVFIVATMILNVYYYMYFTK 168
             ++ G+F T AV  + T+ L + YY+  T 
Sbjct: 102 YIVKPGVFSTGAVLSLVTIALGIVYYLCLTS 132