Miyakogusa Predicted Gene

Lj0g3v0274889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0274889.1 Non Chatacterized Hit- tr|I1KDD7|I1KDD7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.05,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; DNA-glycosylase,DNA glycosylase; no
description,DNA,NODE_17350_length_2207_cov_53.992298.path2.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein | ...   461   e-130
AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   461   e-130
AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   310   1e-84
AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein | ...   293   2e-79
AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein | ...   263   1e-70
AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein | ...   231   6e-61
AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein | ...   231   6e-61
AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein | ...   215   4e-56
AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein | ...   215   5e-56

>AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  461 bits (1185), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/346 (64%), Positives = 266/346 (76%), Gaps = 2/346 (0%)

Query: 1   MSGAPRLRSMNVADSEARPVLGPAGNKTGSLSSRKSASKPLRKVDKLLDEAASAVKEKKP 60
           MSGAPR++SMNVA++E R  LG    K     + K+ SK LRK+++      +   EK  
Sbjct: 1   MSGAPRVQSMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERS-SSGRTGSDEKTS 59

Query: 61  HQVLXXXXXXXPKSYPAARVSSLLSRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLT 120
           +           + +     +S+L RHEQ L+SNLSLNAS SSDAS DSFHSRASTGRL 
Sbjct: 60  YATPTETVSSSSQKH-TLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTGRLI 118

Query: 121 RSYSLGTRRKPYVSKPRSVASDGVLESPPDASQSKKRCAWVTPNTEPCYATFHDEEWGVP 180
           RSYS+G+R K Y SKPRSV S+G L+SPP+ S++KKRC WVTPN++PCY  FHDEEWGVP
Sbjct: 119 RSYSVGSRSKSYPSKPRSVVSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVP 178

Query: 181 VHDDKKLFELLVLSIALAELSWPVILSKRHSFREAFADFDPVAVSKLNEKKMMAPGTVAS 240
           VHDDK+LFELLVLS ALAE +WP ILSKR +FRE FADFDP A+ K+NEKK++ PG+ AS
Sbjct: 179 VHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPAS 238

Query: 241 SLLSELKLRAVIENARQISKVIDEFGSFDKYIWSFVNHKPIVNRFRYPRQVPVKTPKADV 300
           +LLS+LKLRAVIENARQI KVI+E+GSFDKYIWSFV +K IV++FRY RQVP KTPKA+V
Sbjct: 239 TLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEV 298

Query: 301 ISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMSCFRFPECIAAAE 346
           ISKDLVRRGFR VGPTV+YSFMQ AG TNDHL SCFRF  CI   E
Sbjct: 299 ISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHCIFEHE 344


>AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  461 bits (1185), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/346 (64%), Positives = 266/346 (76%), Gaps = 2/346 (0%)

Query: 1   MSGAPRLRSMNVADSEARPVLGPAGNKTGSLSSRKSASKPLRKVDKLLDEAASAVKEKKP 60
           MSGAPR++SMNVA++E R  LG    K     + K+ SK LRK+++      +   EK  
Sbjct: 1   MSGAPRVQSMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERS-SSGRTGSDEKTS 59

Query: 61  HQVLXXXXXXXPKSYPAARVSSLLSRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLT 120
           +           + +     +S+L RHEQ L+SNLSLNAS SSDAS DSFHSRASTGRL 
Sbjct: 60  YATPTETVSSSSQKH-TLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTGRLI 118

Query: 121 RSYSLGTRRKPYVSKPRSVASDGVLESPPDASQSKKRCAWVTPNTEPCYATFHDEEWGVP 180
           RSYS+G+R K Y SKPRSV S+G L+SPP+ S++KKRC WVTPN++PCY  FHDEEWGVP
Sbjct: 119 RSYSVGSRSKSYPSKPRSVVSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVP 178

Query: 181 VHDDKKLFELLVLSIALAELSWPVILSKRHSFREAFADFDPVAVSKLNEKKMMAPGTVAS 240
           VHDDK+LFELLVLS ALAE +WP ILSKR +FRE FADFDP A+ K+NEKK++ PG+ AS
Sbjct: 179 VHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPAS 238

Query: 241 SLLSELKLRAVIENARQISKVIDEFGSFDKYIWSFVNHKPIVNRFRYPRQVPVKTPKADV 300
           +LLS+LKLRAVIENARQI KVI+E+GSFDKYIWSFV +K IV++FRY RQVP KTPKA+V
Sbjct: 239 TLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEV 298

Query: 301 ISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMSCFRFPECIAAAE 346
           ISKDLVRRGFR VGPTV+YSFMQ AG TNDHL SCFRF  CI   E
Sbjct: 299 ISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHCIFEHE 344


>AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:5486544-5488494 REVERSE LENGTH=352
          Length = 352

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/350 (49%), Positives = 222/350 (63%), Gaps = 19/350 (5%)

Query: 1   MSGAPRLRSMNVADSEARPVLGPAGNKTGSLSSRKSASKPLRK---VDKLLDEAASAVKE 57
           MS  PR RS+N  + E R VLGP GNK           KP+ +   +D   ++A      
Sbjct: 1   MSVPPRFRSVNSDEREFRSVLGPTGNKLQRKPPGMKLEKPMMEKTIIDSKDEKAKKPTTP 60

Query: 58  KKPHQVLXXXXXXXPKSYPAARVSSLLSRHEQLLHSNLSLNASCSSDASTDSFHSRASTG 117
             P   L            ++  SS+L ++   + ++ S +AS S ++S  S  S +S  
Sbjct: 61  ASPRTTLKQC---------SSLCSSILRKNSASMTASYSSDASSSCESSPLSVASSSSCK 111

Query: 118 RLTR-SYSLGTRRKPYVSKPRSVASDGVLESPPDASQSKKRCAWVTPNTEPCYATFHDEE 176
           ++ R S S+ + RK  V K     S          +  +KRCAW+TP  +PCY  FHDEE
Sbjct: 112 KVVRRSGSVSSTRKLSVGKEEEKVSGDCF------ADGRKRCAWITPKADPCYVAFHDEE 165

Query: 177 WGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFREAFADFDPVAVSKLNEKKMMAPG 236
           WGVPVHDDKKLFELL LS ALAELSW  ILS+RH  RE F DFDPVAV++LN+KK+ APG
Sbjct: 166 WGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAPG 225

Query: 237 TVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWSFVNHKPIVNRFRYPRQVPVKTP 296
           T A SLLSE+K+R++++N+R + K+I E GS  KY+W+FVN+KP  ++FRY RQVPVKT 
Sbjct: 226 TAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTS 285

Query: 297 KADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMSCFRFPECIAAAE 346
           KA+ ISKDLVRRGFR V PTVIYSFMQ AG TNDHL+ CFR+ +C   AE
Sbjct: 286 KAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDCCVDAE 335


>AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:30385607-30387272 REVERSE LENGTH=327
          Length = 327

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 130/192 (67%), Positives = 154/192 (80%)

Query: 155 KKRCAWVTPNTEPCYATFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFRE 214
           +KRCAW+TP ++ CY  FHDEEWGVPVHDDK+LFELL LS ALAELSW  ILSKR  FRE
Sbjct: 133 RKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFRE 192

Query: 215 AFADFDPVAVSKLNEKKMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWS 274
            F DFDP+A+S+L  KK+ +P   A++LLSE KLR+++ENA Q+ K+I  FGSFDKYIW+
Sbjct: 193 VFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWN 252

Query: 275 FVNHKPIVNRFRYPRQVPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMS 334
           FVN KP  ++FRYPRQVPVKT KA++ISKDLVRRGFR V PTVIYSFMQ AG TNDHL  
Sbjct: 253 FVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTC 312

Query: 335 CFRFPECIAAAE 346
           CFR  +C+   E
Sbjct: 313 CFRHHDCMTKDE 324


>AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:28187647-28189612 REVERSE LENGTH=329
          Length = 329

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 144/191 (75%)

Query: 156 KRCAWVTPNTEPCYATFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFREA 215
           KRC W+TPN++P Y  FHDEEWGVPV DDKKLFELLV S ALAE SWP IL +R  FR+ 
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178

Query: 216 FADFDPVAVSKLNEKKMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWSF 275
           F +FDP A+++  EK++M+       +LSE KLRA++ENA+ + KV  EFGSF  Y W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238

Query: 276 VNHKPIVNRFRYPRQVPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMSC 335
           VNHKP+ N +RY RQVPVK+PKA+ ISKD+++RGFR VGPTV+YSF+Q +G  NDHL +C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298

Query: 336 FRFPECIAAAE 346
           FR+ EC    E
Sbjct: 299 FRYQECNVETE 309


>AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 107/252 (42%), Positives = 166/252 (65%), Gaps = 17/252 (6%)

Query: 102 SSDASTDSFHSRASTGRLTRSYSLGT-----RRKPYVSK--PRSVASDGVLESPPDASQS 154
           +   STDS     ST     S +LG      RR+ +V K  P+ +  D       ++S  
Sbjct: 64  TDSVSTDS----NSTLEQKISLALGLISSPHRREIFVPKSIPQQLCQDF------NSSDE 113

Query: 155 KKRCAWVTPNTEPCYATFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFRE 214
            KRC W+T  ++  Y  FHD++WGVPV+DD  LFE L +S  L + +W  IL ++  FRE
Sbjct: 114 PKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFRE 173

Query: 215 AFADFDPVAVSKLNEKKMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWS 274
           AF +FDP  V+K+ EK++    +  + +L E ++R +++NA+ I+KV++EFGSF  ++W 
Sbjct: 174 AFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWG 233

Query: 275 FVNHKPIVNRFRYPRQVPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMS 334
           F+++KPI+N+F+Y R VP+++PKA++ISKD+++RGFR VGP +++SFMQ AG T DHL+ 
Sbjct: 234 FMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVD 293

Query: 335 CFRFPECIAAAE 346
           CFR  +C++ AE
Sbjct: 294 CFRHGDCVSLAE 305


>AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 107/252 (42%), Positives = 166/252 (65%), Gaps = 17/252 (6%)

Query: 102 SSDASTDSFHSRASTGRLTRSYSLGT-----RRKPYVSK--PRSVASDGVLESPPDASQS 154
           +   STDS     ST     S +LG      RR+ +V K  P+ +  D       ++S  
Sbjct: 64  TDSVSTDS----NSTLEQKISLALGLISSPHRREIFVPKSIPQQLCQDF------NSSDE 113

Query: 155 KKRCAWVTPNTEPCYATFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFRE 214
            KRC W+T  ++  Y  FHD++WGVPV+DD  LFE L +S  L + +W  IL ++  FRE
Sbjct: 114 PKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFRE 173

Query: 215 AFADFDPVAVSKLNEKKMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWS 274
           AF +FDP  V+K+ EK++    +  + +L E ++R +++NA+ I+KV++EFGSF  ++W 
Sbjct: 174 AFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWG 233

Query: 275 FVNHKPIVNRFRYPRQVPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMS 334
           F+++KPI+N+F+Y R VP+++PKA++ISKD+++RGFR VGP +++SFMQ AG T DHL+ 
Sbjct: 234 FMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVD 293

Query: 335 CFRFPECIAAAE 346
           CFR  +C++ AE
Sbjct: 294 CFRHGDCVSLAE 305


>AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr3:4040572-4041828 REVERSE LENGTH=312
          Length = 312

 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 99/197 (50%), Positives = 134/197 (68%), Gaps = 2/197 (1%)

Query: 149 PDASQSKKRCAWVTPNTEPCYATFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSK 208
           P+ +   +RC+++TP ++P Y  +HDEEWGVPVHDDK LFELL LS A     W   L K
Sbjct: 115 PNPNPHPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRK 174

Query: 209 RHSFREAFADFDPVAVSKLNEKKMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSF 268
           RH +R+AF +F+   V+KL EK+M A        +S  K+R V+ENA++I ++   F S 
Sbjct: 175 RHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMS--KVRGVVENAKKIVEIKKAFVSL 232

Query: 269 DKYIWSFVNHKPIVNRFRYPRQVPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFT 328
           +KY+W FVNHKPI   ++   ++PVKT K++ ISKD+VRRGFR VGPTV++SFMQ AG T
Sbjct: 233 EKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLT 292

Query: 329 NDHLMSCFRFPECIAAA 345
           NDHL++C R   C   A
Sbjct: 293 NDHLITCCRHAPCTLLA 309


>AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:18024461-18025893 REVERSE LENGTH=353
          Length = 353

 Score =  215 bits (547), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 198/355 (55%), Gaps = 28/355 (7%)

Query: 7   LRSMNVADSEARPVLGPAGNKTGSLSSRKSASKPLRKVDKLLDEAASAVKEKKPHQVLXX 66
           L   N++    RPVL P  N+  +L  R S  K      K L+  AS +   +P  ++  
Sbjct: 9   LTQENISQINGRPVLQPKSNQVPTLDRRNSLKK---SPPKPLNPIASKIPSPRPISLISP 65

Query: 67  XXXXXPKSY--PAARVSSLLSRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLTRSY- 123
                 KS   PA          ++LL S+ + +    S  ++D  +       + +   
Sbjct: 66  PLSPNTKSLRKPAGSC-------KELLRSSSTKSKPVISPENSDGGYKEVMPMVIVQKQP 118

Query: 124 -SLGTRRKPYVS-----KPRSVASDGVLESPPDASQS-------KKRCAWVTPNTEPCYA 170
            S+   R+  V+     + + ++  G ++S     ++       KKRC+++T +++P Y 
Sbjct: 119 GSIAAARREEVAMKQEERKKKISHYGRIKSVKSNEKNLNVEHEKKKRCSFITTSSDPIYV 178

Query: 171 TFHDEEWGVPVHDDKKLFELLVLSIALAELSWPVILSKRHSFREAFADFDPVAVSKLNEK 230
            +HD+EWGVPVHDD  LFELLVL+ A     W  +L +R++FREAF+ F+   V+  NEK
Sbjct: 179 AYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREAFSGFEAELVADFNEK 238

Query: 231 KMMAPGTVASSLLSELKLRAVIENARQISKVIDEFGSFDKYIWSFVNHKPIVNRFRYPRQ 290
           K+ +   V    ++  ++ AV++NA+QI KV  + GSF+KYIW F+ HKP+  ++   ++
Sbjct: 239 KIQS--IVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNKYIWGFMKHKPVTTKYTSCQK 296

Query: 291 VPVKTPKADVISKDLVRRGFRGVGPTVIYSFMQVAGFTNDHLMSCFRFPECIAAA 345
           +PVKT K++ ISKD+VRRGFR VGPTVI+S MQ AG TNDHL++C R  EC A A
Sbjct: 297 IPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITCPRHLECTAMA 351