Miyakogusa Predicted Gene

Lj0g3v0274789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0274789.1 Non Chatacterized Hit- tr|I1NAJ0|I1NAJ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1205
PE=,92.25,0,HGTP_anticodon,Anticodon-binding; Class II aaRS
ABD-related,Anticodon-binding; THREONYL-TRNA
SYNTHET,NODE_33167_length_858_cov_51.283218.path2.1
         (129 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04842.1 | Symbols: EMB2761 | threonyl-tRNA synthetase, putat...   218   1e-57
AT5G26830.1 | Symbols:  | Threonyl-tRNA synthetase | chr5:943735...    93   4e-20
AT1G17960.1 | Symbols:  | Threonyl-tRNA synthetase | chr1:618101...    87   2e-18
AT1G18130.1 | Symbols:  | Class II aaRS and biotin synthetases s...    80   2e-16

>AT2G04842.1 | Symbols: EMB2761 | threonyl-tRNA synthetase, putative
           / threonine--tRNA ligase, putative |
           chr2:1698466-1701271 REVERSE LENGTH=650
          Length = 650

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 114/129 (88%)

Query: 1   MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQARVLPVTDAQLEYCNDVTNKLKMYGIR 60
           MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQ RVLPVTD QLE+C +V+ KL+  G+R
Sbjct: 522 MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVSKKLRACGVR 581

Query: 61  AEVCHGERLPKLIRNAEKQKIPLMAVVGSKEVETGTVTVRSRFGGELGTMSVDDFINRIK 120
           AE+CHGERLPKLIRNAE QKIPLMAVVG KEVETGTVTVRSRFGGELGT+ VDD IN+I 
Sbjct: 582 AELCHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDLINKIN 641

Query: 121 LGTGNQSSL 129
           +    +++L
Sbjct: 642 IAVETRTAL 650


>AT5G26830.1 | Symbols:  | Threonyl-tRNA synthetase |
           chr5:9437351-9441568 FORWARD LENGTH=709
          Length = 709

 Score = 93.2 bits (230), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 1   MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQARVLPVTDAQLEYCNDVTNKLKMYGIR 60
           MIHRAVLGS+ER F +L+EHY G +P W+SP QA V P+++   +Y   V  ++K  G  
Sbjct: 582 MIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFY 641

Query: 61  AEVCHGER-LPKLIRNAEKQKIPLMAVVGSKEVETGTVTVRSRFGGELGTMSVDDFINRI 119
            +    +R + K +R A+  +   + VVG  E  TG V+VR R        S++D +   
Sbjct: 642 VDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEF 701

Query: 120 KLGTG 124
           K  T 
Sbjct: 702 KAKTA 706


>AT1G17960.1 | Symbols:  | Threonyl-tRNA synthetase |
           chr1:6181015-6183737 REVERSE LENGTH=458
          Length = 458

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 1   MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQARVLPVTDAQLEYCNDVTNKLKMYGIR 60
           MIH AVLGS+ER F +L+EHY G +P WLSP QA V  +++    Y   V  ++   G  
Sbjct: 327 MIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYAKQVQKQINEVGYY 386

Query: 61  AEVCHGER-LPKLIRNAEKQKIPLMAVVGSKEVETGTVTVRSRFGGE----LGTMSVDDF 115
            ++   +R L K + +A       + VVG KEV TG VTVR R   E    L  MS++  
Sbjct: 387 VDIDESDRSLRKKVADARDAPYNYILVVGQKEVATGQVTVRLREDPEGRKDLPEMSIESL 446

Query: 116 INRIKLGTGN 125
           ++  K  T N
Sbjct: 447 LDEFKFKTVN 456


>AT1G18130.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr1:6235895-6238799 FORWARD
           LENGTH=165
          Length = 165

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 1   MIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQARVLPVTDAQLEYCNDVTNKLKMYGIR 60
           +IHRAVL S+ER F +L+E Y G FP WLSP QA V  V++    Y + V +++   G  
Sbjct: 42  LIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAIVCSVSEDYRSYADKVRDQIHEAGYY 101

Query: 61  AEVCHGER-LPKLIRNAEKQKIPLMAVVGSKEVETGTVTVRSRFGGELGTMSVDDFINRI 119
            +V   +R +   ++ A+      + VVG +E  TG VTV  R   E+  MS++   +  
Sbjct: 102 VDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEARTGQVTVWLR--DEM--MSIETLSDEF 157

Query: 120 KLGTGN 125
           KL T N
Sbjct: 158 KLKTAN 163