Miyakogusa Predicted Gene

Lj0g3v0274139.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0274139.2 Non Chatacterized Hit- tr|I1JH49|I1JH49_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41343
PE,84.99,0,NAD_Glyc3P_dehydrog,Glycerol-3-phosphate dehydrogenase,
NAD-dependent; no description,NAD(P)-binding,CUFF.18158.2
         (438 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40690.1 | Symbols: GLY1, SFD1 | NAD-dependent glycerol-3-pho...   645   0.0  
AT5G40610.1 | Symbols:  | NAD-dependent glycerol-3-phosphate deh...   108   8e-24
AT2G41540.3 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...    65   1e-10
AT2G41540.2 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...    65   1e-10
AT2G41540.1 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...    65   1e-10
AT3G07690.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...    58   1e-08

>AT2G40690.1 | Symbols: GLY1, SFD1 | NAD-dependent
           glycerol-3-phosphate dehydrogenase family protein |
           chr2:16974107-16976241 FORWARD LENGTH=420
          Length = 420

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/357 (88%), Positives = 334/357 (93%)

Query: 82  AWEKLVRWSRSLRSKSNTDVLERTNKVVVLGGGSFGTAMAAHVANRKAQLEVNMLVRDPQ 141
           AWEKLVRWSRSLR+K+ TDVLERT KVVVLGGGSFGTAMAAHVA RK  LEVNMLVRD  
Sbjct: 64  AWEKLVRWSRSLRAKAKTDVLERTRKVVVLGGGSFGTAMAAHVARRKEGLEVNMLVRDSF 123

Query: 142 VCLSINERHCNSNYFPDHTLPENVVATTDAKSALRDADYCLHAVPVQFSSTFLESIADYV 201
           VC SINE H N  YFP+H LPENV+ATTDAK+AL DADYCLHAVPVQFSS+FLE IADYV
Sbjct: 124 VCQSINENHHNCKYFPEHKLPENVIATTDAKAALLDADYCLHAVPVQFSSSFLEGIADYV 183

Query: 202 DPGLPFISLSKGLELNTLRMMAQIIPQALRNPRQPFVALSGPSFALELMNKLPTAMVVAS 261
           DPGLPFISLSKGLELNTLRMM+QIIP AL+NPRQPFVALSGPSFALELMN LPTAMVVAS
Sbjct: 184 DPGLPFISLSKGLELNTLRMMSQIIPIALKNPRQPFVALSGPSFALELMNNLPTAMVVAS 243

Query: 262 KDKKLANRVQQLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALV 321
           KDKKLAN VQQLLASS+LRI+TSSDVTGVEIAGALKNVLAIAAGIV GMNLGNNSMAALV
Sbjct: 244 KDKKLANAVQQLLASSYLRINTSSDVTGVEIAGALKNVLAIAAGIVDGMNLGNNSMAALV 303

Query: 322 SQGCSEIRWLATKMGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLENILNS 381
           SQGCSEIRWLATKMGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE L++IL S
Sbjct: 304 SQGCSEIRWLATKMGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGETLDDILTS 363

Query: 382 MNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKKAVFELMSLPQVEEV 438
           MNQVAEGV+TAGAVIALAQKYNVK+PVLTAVA+IIDNELTP KAV ELM+LPQ+EEV
Sbjct: 364 MNQVAEGVATAGAVIALAQKYNVKLPVLTAVAKIIDNELTPTKAVLELMNLPQIEEV 420


>AT5G40610.1 | Symbols:  | NAD-dependent glycerol-3-phosphate
           dehydrogenase family protein | chr5:16265071-16267258
           REVERSE LENGTH=400
          Length = 400

 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 170/360 (47%), Gaps = 31/360 (8%)

Query: 90  SRSLRSKSNTDVLERTNKVVVLGGGSFGTAMAAHVANRKAQL-----EVNMLVRDP---- 140
           SR      N D     +KV V+G G++G+  A  +A+   +L     EV M V +     
Sbjct: 42  SRQGNGGCNDD---SKSKVTVVGSGNWGSVAAKLIASNALKLPSFHDEVRMWVFEEVLPN 98

Query: 141 --QVCLSINERHCNSNYFPDHTLPENVVATTDAKSALRDADYCLHAVPVQFSSTFLESIA 198
             ++   IN+ + N  Y P   L  NVVA  D ++A++DA+  +   P QF     + + 
Sbjct: 99  GEKLNDVINKTNENVKYLPGIKLGRNVVADPDLENAVKDANMLVFVTPHQFMDGICKKLD 158

Query: 199 DYVDPGLPFISLSKGLELNTLR--MMAQIIPQALRNPRQPFVALSGPSFALEL-MNKLPT 255
             +   +  ISL KG+E+      M++ +I + L         L G + A E+ + K   
Sbjct: 159 GKITGDVEAISLVKGMEVKKEGPCMISSLISKQLG---INCCVLMGANIANEIAVEKFSE 215

Query: 256 AMVVASKDKKLANRVQQLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 315
           A V     +++A+   QL ++ +  ++   DV GVE+ G LKNV+AIAAG V G+ +GNN
Sbjct: 216 ATVGYRGSREIADTWVQLFSTPYFMVTPVHDVEGVELCGTLKNVVAIAAGFVDGLEMGNN 275

Query: 316 SMAALVSQGCSEIRWLATKM--GAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-- 371
           + AA++  G  E++ L+  +    K +T     G  D++ TC     RNR V        
Sbjct: 276 TKAAIMRIGLREMKALSKLLFPSVKDSTFFESCGVADVITTCLG--GRNRRVAEAFAKSR 333

Query: 372 GEKLENILNS---MNQVAEGVSTAGAVIALAQK--YNVKMPVLTAVARIIDNELTPKKAV 426
           G++  + L +     Q  +GVSTA  V  + +   +    P+ + V +I    L P+  V
Sbjct: 334 GKRSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMFPLFSTVHQICTGRLQPEAIV 393


>AT2G41540.3 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 169 TDAKSALRDADYCLHAVPVQFSSTFLESIADYVDPGLP---FISLSKGLE-----LNTLR 220
           T+ + A+ DAD  ++ +P   +    E I+ Y    +     ISLSKG+E     +  + 
Sbjct: 150 TNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPIIISLSKGIETALEPVPHII 209

Query: 221 MMAQIIPQALRNPRQPFVALSGPSFALELMNK-LPTAMVVASKDKKLANRVQQLLASSHL 279
              ++I QA   P    + L GP+ A E+ NK    A +  +   K    + + L   H 
Sbjct: 210 TPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGAA--KWRKPLAKFLRQPHF 267

Query: 280 RISTSSDVTGVEIAGALKNVLAIAAGIVVGM-NLGNNSMAALVSQGCSEIRWLATKMGAK 338
            +  +SD+   E+ G LKNV AI AG+V  + N    S +   +   SE+ ++   +  +
Sbjct: 268 IVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEE 327

Query: 339 PTTITGLSGTGDIMLTCFVNL--SRNRTVGVRLGSGEKLENILNSMN--QVAEGVSTAGA 394
           P  +      G ++   +V L   RN   G  L  GE   ++ +S++   + +GVS  GA
Sbjct: 328 PEKL-----AGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGKGMIQGVSAVGA 382


>AT2G41540.2 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 169 TDAKSALRDADYCLHAVPVQFSSTFLESIADYVDPGLP---FISLSKGLE-----LNTLR 220
           T+ + A+ DAD  ++ +P   +    E I+ Y    +     ISLSKG+E     +  + 
Sbjct: 150 TNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPIIISLSKGIETALEPVPHII 209

Query: 221 MMAQIIPQALRNPRQPFVALSGPSFALELMNK-LPTAMVVASKDKKLANRVQQLLASSHL 279
              ++I QA   P    + L GP+ A E+ NK    A +  +   K    + + L   H 
Sbjct: 210 TPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGAA--KWRKPLAKFLRQPHF 267

Query: 280 RISTSSDVTGVEIAGALKNVLAIAAGIVVGM-NLGNNSMAALVSQGCSEIRWLATKMGAK 338
            +  +SD+   E+ G LKNV AI AG+V  + N    S +   +   SE+ ++   +  +
Sbjct: 268 IVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEE 327

Query: 339 PTTITGLSGTGDIMLTCFVNL--SRNRTVGVRLGSGEKLENILNSMN--QVAEGVSTAGA 394
           P  +      G ++   +V L   RN   G  L  GE   ++ +S++   + +GVS  GA
Sbjct: 328 PEKL-----AGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGKGMIQGVSAVGA 382


>AT2G41540.1 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 169 TDAKSALRDADYCLHAVPVQFSSTFLESIADYVDPGLP---FISLSKGLE-----LNTLR 220
           T+ + A+ DAD  ++ +P   +    E I+ Y    +     ISLSKG+E     +  + 
Sbjct: 150 TNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPIIISLSKGIETALEPVPHII 209

Query: 221 MMAQIIPQALRNPRQPFVALSGPSFALELMNK-LPTAMVVASKDKKLANRVQQLLASSHL 279
              ++I QA   P    + L GP+ A E+ NK    A +  +   K    + + L   H 
Sbjct: 210 TPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGAA--KWRKPLAKFLRQPHF 267

Query: 280 RISTSSDVTGVEIAGALKNVLAIAAGIVVGM-NLGNNSMAALVSQGCSEIRWLATKMGAK 338
            +  +SD+   E+ G LKNV AI AG+V  + N    S +   +   SE+ ++   +  +
Sbjct: 268 IVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEE 327

Query: 339 PTTITGLSGTGDIMLTCFVNL--SRNRTVGVRLGSGEKLENILNSMN--QVAEGVSTAGA 394
           P  +      G ++   +V L   RN   G  L  GE   ++ +S++   + +GVS  GA
Sbjct: 328 PEKL-----AGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGKGMIQGVSAVGA 382


>AT3G07690.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr3:2457232-2459378 FORWARD LENGTH=466
          Length = 466

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 47/326 (14%)

Query: 112 GGGSFGTAMAAH---VANRKAQLEVNMLVRDPQVCLSINERHCNSNYFPDHTLPE----N 164
           GG +   A A H   V N + +L +  L+R       +  R  +   + D  L +    N
Sbjct: 72  GGRAIDKATAEHLFEVINSREEL-LRRLIRRCAYLKYVEARLGDRVLYADEILKDGFCLN 130

Query: 165 VVAT--------TDAKSALRDADYCLHAVPVQFSSTFLESIADYVDPGLP---FISLSKG 213
           ++ T        T+ + A+ DAD  ++ +P   +      I+ Y    +     ISL+KG
Sbjct: 131 MIETPLCPLKVVTNLQEAVWDADIVINGLPSTETFQVFNEISKYWKERVNAPVIISLAKG 190

Query: 214 LELN-----TLRMMAQIIPQALRNPRQPFVALSGPSFALELMNK-LPTAMVVASKDKKLA 267
           +E        +    Q+I +A   P +  + L GP+ A E+ NK    A +  S+  K  
Sbjct: 191 VEAEFEPHPRIVTPTQMIHRATGIPLENILYLGGPNIASEVYNKEYANARICGSE--KWR 248

Query: 268 NRVQQLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVSQGC-- 325
             + + L  SH  +  +SD+   E+ G LKNV AI A  V+        +A L  +    
Sbjct: 249 KPLGKFLRQSHFIVWDNSDLITHEVMGGLKNVYAIGAVFVLAFLYSTGMVATLTKESATS 308

Query: 326 ---------SEIRWLATKMGAKPTTITGLSGTGDIMLTCFVNL--SRNRTVGVRLGSGEK 374
                    SE+ ++   +  +P  +      G ++   +V L   RN   G +L  GE 
Sbjct: 309 KSVYFAHCTSEMIFITHLLAKEPEKL-----AGPLLADTYVTLLKGRNAWYGQKLAKGEL 363

Query: 375 LENILNSM--NQVAEGVSTAGAVIAL 398
              + +S+    + +GVS   A   L
Sbjct: 364 SLEMGDSIKGKGMIQGVSAVKAFFEL 389