Miyakogusa Predicted Gene

Lj0g3v0273799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273799.1 tr|C1FGE2|C1FGE2_MICSR Cwf15/Cwc15 cell cycle
control family protein OS=Micromonas sp. (strain
RCC29,63.51,8e-18,Cwf_Cwc_15,Cwf15/Cwc15 cell cycle control protein;
SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL PROT,CUFF.18136.1
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13200.1 | Symbols: EMB2769 | Cwf15 / Cwc15 cell cycle contro...   130   2e-31

>AT3G13200.1 | Symbols: EMB2769 | Cwf15 / Cwc15 cell cycle control
           family protein | chr3:4242239-4243976 FORWARD LENGTH=230
          Length = 230

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/106 (59%), Positives = 76/106 (71%)

Query: 1   MTTAAQPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRGDRQDTHDXXXXXXXX 60
           MTTAA+PTWAPAKGGNEQGG RIFGPSQKYSSRD+A+HTTLKPR + Q T +        
Sbjct: 1   MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60

Query: 61  XXXXXXXXXHFSSKNKSYSDDRDHGKSNRLFLEGTKRDVEDNIVAR 106
                    HFSSK+KSY+DDRD  + ++L LE +KRD E+ I+ R
Sbjct: 61  DELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEERIIPR 106