Miyakogusa Predicted Gene

Lj0g3v0273669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273669.1 Non Chatacterized Hit- tr|F0Y7C7|F0Y7C7_AURAN
Putative uncharacterized protein (Fragment)
OS=Aureoco,46.3,4e-18,PH_DOMAIN,Pleckstrin homology domain; Pleckstrin
homology domain.,Pleckstrin homology domain; PH,Ple,CUFF.18121.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29700.1 | Symbols: ATPH1, PH1 | pleckstrin homologue 1 | chr...   218   2e-57
AT5G05710.1 | Symbols:  | Pleckstrin homology (PH) domain superf...   196   5e-51

>AT2G29700.1 | Symbols: ATPH1, PH1 | pleckstrin homologue 1 |
           chr2:12697571-12698008 FORWARD LENGTH=145
          Length = 145

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/144 (70%), Positives = 119/144 (82%)

Query: 1   MENLWRVATGQDPNPEDYTGIEFWSNPERAGWLTKQGDYIKTWRRRWFVLKQGKLFWFKD 60
           ME++WR+ATGQDP+ EDY GIEFWSNPER+GWLTKQGDYIKTWRRRWFVLK+GKL WFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  XXXXXXXXXVPRGVISAATSLTVKGAEDVLHKPFSFELSTPHSTMFFVADCDKDKEDWIN 120
                     PRGVIS    LTVKGAEDV++KPF+FELS+   TMFF+AD +K+KE+WIN
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query: 121 SIGRAIVLHSRSHAHSEVLDYENK 144
           SIGR+IV HSRS   SEVLDY+++
Sbjct: 121 SIGRSIVQHSRSVTDSEVLDYDHR 144


>AT5G05710.1 | Symbols:  | Pleckstrin homology (PH) domain
           superfamily protein | chr5:1715943-1716377 FORWARD
           LENGTH=144
          Length = 144

 Score =  196 bits (498), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/145 (65%), Positives = 113/145 (77%), Gaps = 3/145 (2%)

Query: 1   MENLWR-VATGQDPNPEDYTGIEFWSNPERAGWLTKQGDYIKTWRRRWFVLKQGKLFWFK 59
           M +LWR V  GQ+ N EDY G+EFWSNPER GWLTKQG+YIKTWRRRWFVLKQGKLFWFK
Sbjct: 1   MASLWRAVIGGQNNNSEDYGGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFK 60

Query: 60  DXXXXXXXXXVPRGVISAATSLTVKGAEDVLHKPFSFELSTPHSTMFFVADCDKDKEDWI 119
           D          PRGV+   + LT KGAEDVL+K  +FELST + TM+F+AD +K+KEDWI
Sbjct: 61  DSDVTRVSR--PRGVVPVESCLTAKGAEDVLNKQNAFELSTRNETMYFIADSEKEKEDWI 118

Query: 120 NSIGRAIVLHSRSHAHSEVLDYENK 144
           NSIGR+IV +SRS   SE++DY+NK
Sbjct: 119 NSIGRSIVQNSRSVTDSEIVDYDNK 143