Miyakogusa Predicted Gene
- Lj0g3v0273569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0273569.1 tr|D7ML46|D7ML46_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,20.77,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.18203.1
(553 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 182 5e-46
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 8e-41
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 8e-37
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 141 1e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 141 1e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 7e-32
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 133 3e-31
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 132 8e-31
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 8e-31
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 3e-29
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 4e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 5e-29
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 125 7e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 111 1e-24
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 109 4e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 105 9e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 104 2e-22
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 6e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 102 9e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 101 1e-21
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 99 6e-21
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 97 2e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 7e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 84 2e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 82 1e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 81 2e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 4e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 6e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 76 7e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 9e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 73 6e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 72 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 3e-12
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 69 6e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 68 1e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 66 6e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 3e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 3e-08
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 57 3e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 56 6e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 56 7e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 55 1e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 54 3e-07
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 53 5e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 52 1e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 51 2e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 51 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 49 9e-06
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/536 (42%), Positives = 333/536 (62%), Gaps = 23/536 (4%)
Query: 19 LHSHTAFPRNSNHNAVDD---VAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLEL 75
+H +F +N N + I S + +W+ +S KF S++L+DSL+E +LL
Sbjct: 28 IHGFFSFSSKTNPNPNKQQQILIDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRF 87
Query: 76 KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPG 135
K+P AK ALSFFHWS+ T HG++SY++ IH+LV+A L+ DARAL+ES + N P
Sbjct: 88 KNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIES-SLLNSPPD 146
Query: 136 AVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFN 195
+ + DSL+D +S S V DLLVQ YAK+R E FDV + GF +S+ + N
Sbjct: 147 S--DLVDSLLDTYE-ISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLN 203
Query: 196 SVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGE 255
+++H +S LVW +YE I R YPN +T++IMI LCKEG L+ VD LDRI G+
Sbjct: 204 TLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGK 263
Query: 256 RKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYS 315
R PS IVN+SL+ R++E+ + E ++LLKRLL +N+V D++GYS
Sbjct: 264 R----CLPSVIVNTSLVFRVLEEMRIEES-----------MSLLKRLLMKNMVVDTIGYS 308
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
++V+AK + G L SA ++++EM+ GF NSFVYT F C++G + EA L+ ME
Sbjct: 309 IVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEES 368
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G+ PY ETF+ +IG A G E+ L E M+ G +PSC +F++MV+ + + +V +
Sbjct: 369 GVSPYDETFN-CLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNR 427
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
AN LT+ +DKGF+P E TYS LI+G+ ++ + LKL+YEMEY+ M PG VF S+I
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
LC CGK+E EKYLK MK RL+ P+ IY+ +I + ++ G+ ++ NEM S+
Sbjct: 488 GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 232/517 (44%), Gaps = 68/517 (13%)
Query: 73 LELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNR 132
L LK ND L F +W A H+F +R I +H+L + L A+ L E +AAK
Sbjct: 54 LLLKSQNDQALILKFLNW-ANPHQF-FTLRCKCITLHILTKFKLYKTAQILAEDVAAKTL 111
Query: 133 DPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLA 192
D V SL + S V DL+V++Y+++ L + A + +A GF +
Sbjct: 112 DDEYASLVFKSLQETYDLCY-STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVL 170
Query: 193 SFNSVLHVLQRSDR-VSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDR 251
S+N+VL RS R +S +V++ M+ + PN T I+I C G N+D
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG----NIDVALT 226
Query: 252 IMGERKRSSHSPSAIVNSSLI-----LRMVEKG--------------HLVE--------- 283
+ + + P+ + ++LI LR ++ G +L+
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 284 EEGKRERVAVMVVTLLKR-------------------------------LLQQNLVPDSV 312
EG+ + V+ ++ + +R +L+ L P +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ ++H+ + G+++ A+E ++M + G PN YT+ GF ++G ++EA ++R M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G P T++ +I G +G++E+ + V E M G P +S+ ++ C + D
Sbjct: 407 NDNGFSPSVVTYNALINGHCV-TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
V++A +++KG P TYS LI+G+ + +E LY EM + P +T+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+I C G LE A + M + + PDV Y +I
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 205/488 (42%), Gaps = 64/488 (13%)
Query: 100 GVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVL 159
V +Y+I I AG I A L + + K P V ++LID
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV--TYNTLIDG------------ 249
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
Y K+R + F + ++ +G +L S+N V++ L R R+ V V M R
Sbjct: 250 ------YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
+ VT +I CKEG N + E R +PS I +SLI M + G
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEG----NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 280 HL-----------VEEEGKRERVAVMVVT-------------LLKRLLQQNLVPDSVGYS 315
++ V ER +V +L+ + P V Y+
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
+++ G ++ A+ + E+M G P+ Y++ GFC+ +DEA+ + R M +
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G+KP T+ +I G R +E ++E ML G P ++ ++ C D+E+
Sbjct: 480 GIKPDTITYSSLIQGFCE-QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE----VLKLYYE------MEYKSM-- 483
A +++KG LP TYS+LI G + +E +LKL+YE + Y ++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 484 -CPGLSV--FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
C + S+I+ C G + +A++ ++M + PD Y MI H + G+ +
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 541 VLQLCNEM 548
L EM
Sbjct: 659 AYTLYKEM 666
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 154/397 (38%), Gaps = 49/397 (12%)
Query: 89 HWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV 148
H H V +Y+ IH + +AG + A L+ + + P T
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT------- 385
Query: 149 GFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVS 208
LV +++ A+ V + GF S+ ++N++++ + ++
Sbjct: 386 -------------LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 209 LVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
V E M P+ V+ ++ C+ +VD R+ E P I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCR----SYDVDEALRVKREMVEKGIKPDTITY 488
Query: 269 SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
SSLI E+ +R + A L + +L+ L PD Y+ +++A G L+
Sbjct: 489 SSLIQGFCEQ--------RRTKEAC---DLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
AL+++ EMV G P+ Y+ G K+ R EA L+ + P T+ +I
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 389 IGCA--------------AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
C+ G + E VFE+MLG P +++ M+ C D+
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
+A ++ GFL T L+K +G+V E+
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 140/366 (38%), Gaps = 72/366 (19%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
F+ V +Y+ I+ G + DA A+LE + K P V S+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV----------------SYS 454
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
VL ++Y + A V + +G + +++S++ R D+YE
Sbjct: 455 TVLSGFCRSYD----VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M+R P+ T +I+A C EG L++ + ++ E P + S LI +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKAL----QLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 277 EKGH----------LVEEEGKRERVAVM-------------VVTLLK------------- 300
++ L EE V VV+L+K
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 301 ---RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+L +N PD Y++++H R G + A +Y+EMV SGF ++ +
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 358 KEGRIDE----AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
KEG+++E + ++R E + V++ G ++ L V M GF
Sbjct: 687 KEGKVNELNSVIVHVLRSCELSEAEQ-----AKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 414 IPSCLS 419
+P+ +S
Sbjct: 742 LPNGIS 747
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 223/507 (43%), Gaps = 30/507 (5%)
Query: 51 WDAVS-RKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIH 109
WD K L L V +VL+ELK+ D K A FF WS + F H V SY I H
Sbjct: 93 WDDPGLEKLFDLTLAPIWVPRVLVELKE--DPKLAFKFFKWSMTRNGFKHSVESYCIVAH 150
Query: 110 VLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV-GFVSGSHRPVLDLLVQTYAK 168
+L A + DA ++L+ + D + + V GF V D L
Sbjct: 151 ILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF------GVFDALFSVLID 204
Query: 169 MRLTEAAFDVCCNVEARGFRV--SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNA 226
+ + E A + C + + FRV S N +LH + + V ++ MI P
Sbjct: 205 LGMLEEA--IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTV 262
Query: 227 VTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEG 286
T IMID +CKEG +V+A + E K P + +S+I + G L +
Sbjct: 263 FTYNIMIDCMCKEG----DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD--- 315
Query: 287 KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS 346
V + + PD + Y+ +++ + G L LE Y EM +G +PN
Sbjct: 316 --------TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 347 FVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
Y++ FCKEG + +A++ M GL P T+ +I G L + +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS-LIDANCKIGNLSDAFRLGN 426
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKG 466
ML G + +++ +++ LC+ +++A ++ G +P +Y+ LI G+
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 467 EVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYE 526
+ L+L E++ + + P L ++ + I LC K+E A+ + MK + + IY
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 527 TMIASHEQKGNNARVLQLCNEMASLEL 553
T++ ++ + GN L L +EM L++
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDI 573
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 207/496 (41%), Gaps = 85/496 (17%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +Y+I I + + G + AR L E + + P V +S+ID G V LD
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV--TYNSMIDGFGKVGR-----LD 314
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
V + +M+ D+CC + + ++N++++ + ++ + + Y M
Sbjct: 315 DTVCFFEEMK------DMCCEPD-------VITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN V+ ++DA CKEG++Q+ + + + +R P+ +SLI + G+
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAI----KFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 281 LVE-----EEGKRERVAVMVVT-------------------LLKRLLQQNLVPDSVGYSL 316
L + E + V VVT L ++ ++P+ Y+
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++H V+ ++D ALE+ E+ G +P+ +Y +F G C +I+ A +M M+ G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAM----LGAGFIPSCLSFD----------- 421
+K + ++ SG E L + + M + + C+ D
Sbjct: 538 IKANSLIY-TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 422 ---------------------KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
M++ LC++ VE A +++ KG +P T Y+ L+
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G +G V E L L +M M L +TS++ L C +L+ A +L+ M + P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 521 DVAIYETMIASHEQKG 536
D + +++ H + G
Sbjct: 717 DEVLCISVLKKHYELG 732
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 191/386 (49%), Gaps = 16/386 (4%)
Query: 159 LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI 218
L +++ + + R AF + G+ FN++L+ L RVS ++ + M+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ P +TL +++ LC G + V +DR++ + P+ + ++ M +
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV----ETGFQPNEVTYGPVLNVMCKS 241
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
G + + LL+++ ++N+ D+V YS+I+ + GSLD+A ++ EM
Sbjct: 242 GQ-----------TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
+ GF+ + Y + GGFC GR D+ +L+R M R + P TF V+I G+L
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF-SVLIDSFVKEGKL 349
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E + + M+ G P+ ++++ +++ C+ +E+A + ++ KG P T+++L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I GY + + L+L+ EM + + + +++Q C+ GKLE A+K + M SR +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 519 TPDVAIYETMIASHEQKGNNARVLQL 544
PD+ Y+ ++ G + L++
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEI 495
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 210/450 (46%), Gaps = 37/450 (8%)
Query: 99 HGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGF-------- 150
H + + SI I+ R ++ A + + + +P V + ++L++ +
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTV--IFNTLLNGLCLECRVSEAL 178
Query: 151 ------VSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVE---ARGFRVSLASFNSVLHVL 201
V H+P L L + L D ++ GF+ + ++ VL+V+
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 202 QRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSH 261
+S + +L ++ M +AV I+ID LCK+G ++D + E +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG----SLDNAFNLFNEMEIKGF 294
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAK 321
I ++LI G ++G + LL+ ++++ + P+ V +S+++ +
Sbjct: 295 KADIITYNTLIGGFCNAGRW--DDGAK---------LLRDMIKRKISPNVVTFSVLIDSF 343
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
V+ G L A ++ +EM+ G PN+ Y S GFCKE R++EA++++ M +G P
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 382 ETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
TF+ +I G C A R+++ L +F M G I + ++++ +V+ C++ +E A
Sbjct: 404 MTFNILINGYCKAN--RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
++ + P +Y +L+ G GE+++ L+++ ++E M + ++ +I +C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
K++DA ++ + + D Y MI+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 186/434 (42%), Gaps = 79/434 (18%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y ++V+ ++G A LL + +N +DAV + ++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIK-----------LDAVKY---------SII 269
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD----VYEHMI 218
+ K + AF++ +E +GF+ + ++N+++ + R WD + MI
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR----WDDGAKLLRDMI 325
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ + PN VT ++ID+ KEG L+ D+++ E + +P+ I +SLI ++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREA----DQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
L E A+ +V L+ + + PD + ++++++ + +D LE++ EM
Sbjct: 382 NRLEE--------AIQMVDLM---ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
+ G N+ Y + GFC+ G+++ A +L + M R ++P ++ +++ +G L
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY-KILLDGLCDNGEL 489
Query: 399 EECLGVF-------------------EAMLGA----------------GFIPSCLSFDKM 423
E+ L +F M A G +++ M
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+ +LC + +A+ ++ ++G P E TY++LI+ + + +L EM+
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Query: 484 CPGLSVFTSVIQCL 497
+S VI L
Sbjct: 610 PADVSTVKMVINML 623
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+V+ L K++ + + S++++ R L A +++ G+EP++ ++ +
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
G C E R+ EA+EL+ M G KP T + ++ G +G++ + + + + M+ GF
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL-NGKVSDAVVLIDRMVETGF 224
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P+ +++ ++ +C++ A L ++ ++ YS++I G G +
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ EME K + + ++I C G+ +D K L+ M R ++P+V + +I S
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 534 QKGNNARVLQLCNEM 548
++G QL EM
Sbjct: 345 KEGKLREADQLLKEM 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
+ D+A++L R M P F+ + A + + E L + + M G S +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNR-LFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
M+ C R + A + + +++ G+ P ++ L+ G + V E L+L M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
P L +++ LC GK+ DA + M P+ Y ++ + G A
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 541 VLQLCNEM 548
++L +M
Sbjct: 247 AMELLRKM 254
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 200/461 (43%), Gaps = 58/461 (12%)
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
FH+ F H S S IH+LVR+G ++DA++ L + R G R + +D+
Sbjct: 104 FHFP----NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMI---RRSGVSRLEIVNSLDS 156
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
GS+ V DLL++TY + R A + + ++GF VS+ + N+++ L R V
Sbjct: 157 TFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
L W VY+ + R N TL IM++ALCK+G
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDG--------------------------- 249
Query: 268 NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
K E+V T L ++ ++ + PD V Y+ ++ A G +
Sbjct: 250 -------------------KMEKVG----TFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
+ A E+ M GF P + Y + G CK G+ + A E+ M GL P T+ +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 388 IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
++ A G + E VF M +P + F M+ + ++++A + + G
Sbjct: 347 LME-ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
+P Y++LI+GY KG + + L EM + + + +++ LC+ L +A+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 508 KYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
K M R L PD +I H + GN ++L +M
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 183/390 (46%), Gaps = 18/390 (4%)
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
+ L+ Y+ L E AF++ + +GF + ++N+V++ L + + +V+ M+R
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
P++ T + ++ CK+G +V +++ + + P + SS++ G
Sbjct: 334 SGLSPDSTTYRSLLMEACKKG----DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
+L + A+M +K + L+PD+V Y++++ R G + A+ + EM+
Sbjct: 390 NLDK--------ALMYFNSVK---EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRL 398
G + Y + G CK + EA +L M R L P T +I G C G+ L
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN--L 496
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ + +F+ M ++++ +++ + D++ A ++ K LP +YS+L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ +KG + E +++ EM K++ P + + S+I+ CR G D E +L+ M S
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEM 548
PD Y T+I ++ N ++ L +M
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 161/344 (46%), Gaps = 25/344 (7%)
Query: 220 GRNYPN----AVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS------ 269
G ++PN +++L MI L + G L L R++ +RS S IVNS
Sbjct: 103 GFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMI---RRSGVSRLEIVNSLDSTFS 159
Query: 270 -----SLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
+ ++ + ++ + ++ R A TLL+ + + ++ + VR+
Sbjct: 160 NCGSNDSVFDLLIRTYV---QARKLREAHEAFTLLR---SKGFTVSIDACNALIGSLVRI 213
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G ++ A +Y+E+ SG N + CK+G++++ + ++ +G+ P T+
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I + G +EE + AM G GF P +++ ++ LC++ E+A +L
Sbjct: 274 N-TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
G P TTY L+ KG+V E K++ +M + + P L F+S++ R G L+
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A Y ++K L PD IY +I + +KG + + L NEM
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 22/277 (7%)
Query: 296 VTLLKRLLQQ------NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVY 349
+TL +R + Q N S+ S ++H VR G L A M+ +
Sbjct: 92 LTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIV 151
Query: 350 TSFTGGFCKEGRIDEAMELM--RGMEGRGLKPYGETFD--------------HVIIGCAA 393
S F G D +L+ ++ R L+ E F + +IG
Sbjct: 152 NSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLV 211
Query: 394 GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
G +E GV++ + +G + + + MV LC++ +E+ L+++ +KG P
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
TY+ LI Y++KG ++E +L M K PG+ + +VI LC+ GK E A++ M
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 514 KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
L+PD Y +++ +KG+ ++ ++M S
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 100/248 (40%), Gaps = 30/248 (12%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
L +L+ + K+ + A ++ ++ + R+ + ++N++L + + +++ M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P ++ I+++ALC +G L D ++ + + P+ ++ +S+I
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK----PTVMICNSMIKGYCR 597
Query: 278 KGHLVEEEG------------------------KRERVAVMVVTLLKRLL--QQNLVPDS 311
G+ + E RE L+K++ Q LVPD
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
Y+ I+H R + A + +M+ G P+ YT GF + + EA +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 372 MEGRGLKP 379
M RG P
Sbjct: 718 MLQRGFSP 725
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 198/407 (48%), Gaps = 29/407 (7%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L A+ + + D+C +E +G +L + + +++ R ++SL + +I+
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS-----AIVNSS------ 270
P+ VT +I+ LC EG + ++ +DR++ H P+ A+VN
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMV----EMGHKPTLITLNALVNGLCLNGKV 193
Query: 271 -----LILRMVEKGHLVEEEGKRERVAVM--------VVTLLKRLLQQNLVPDSVGYSLI 317
LI RMVE G E + VM + LL+++ ++ + D+V YS+I
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
+ + GSLD+A ++ EM + GF+ + +YT+ GFC GR D+ +L+R M R +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
P F +I C G+L E + + M+ G P +++ +++ C+ +++AN
Sbjct: 314 TPDVVAF-SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
L ++ KG P T+++LI GY + + L+L+ +M + + + ++IQ
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 498 CRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
C GKLE A++ + M SR + PD+ Y+ ++ G + L++
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 175/353 (49%), Gaps = 18/353 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF+ + ++ VL V+ +S + +L ++ M + +AV I+ID LCK+G +
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG----S 262
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+D + E + I+ ++LI G ++G + LL+ ++++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW--DDGAK---------LLRDMIKR 311
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ PD V +S ++ V+ G L A E+++EM+ G P++ YTS GFCKE ++D+A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
++ M +G P TF+ +I G C A +++ L +F M G + ++++ ++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKAN--LIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ CE +E A ++ + P +Y +L+ G GE ++ L+++ ++E M
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+ ++ +I +C K++DA ++ + + PDV Y MI +KG+
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 157/351 (44%), Gaps = 41/351 (11%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD----VYEHMIRGRNYPNAVT 228
+ AF++ +E +GF+ + + +++ + R WD + MI+ + P+ V
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR----WDDGAKLLRDMIKRKITPDVVA 319
Query: 229 LKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEE--- 285
+ID KEG L R + L + M +R SP + +SLI ++ L +
Sbjct: 320 FSALIDCFVKEGKL-REAEELHKEMIQR---GISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 286 --------GKRERVAVMVVT-------------LLKRLLQQNLVPDSVGYSLIVHAKVRL 324
G R +++ L +++ + +V D+V Y+ ++ L
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G L+ A E+++EMV P+ Y G C G ++A+E+ +E ++ +
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I G S ++++ +F ++ G P +++ M+ LC+ + +A+ ++
Sbjct: 496 NIIIHGMCNAS-KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
+ G P TY++LI+ + +G+ + KL E++ C G SV S ++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR---C-GFSVDASTVK 601
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 135/356 (37%), Gaps = 74/356 (20%)
Query: 95 HRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS-- 152
+ V ++S I V+ G + +A L + + + P V SLID GF
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT--SLID--GFCKEN 366
Query: 153 -----------------GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFN 195
G + ++L+ Y K L + ++ + RG ++N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 196 SVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGE 255
+++ ++ + ++++ M+ R P+ V+ KI++D LC G ++ ++ ++I
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI--- 483
Query: 256 RKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYS 315
E+ K E D Y+
Sbjct: 484 ----------------------------EKSKMEL-------------------DIGIYN 496
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
+I+H +D A +++ + + G +P+ Y GG CK+G + EA L R ME
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
G P G T+ +++I G G + + E + GF + +V+ L + R
Sbjct: 557 GHSPNGCTY-NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 195/411 (47%), Gaps = 37/411 (9%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L AK + + +C +E +G +L + + +++ R ++ L + +I+
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL---------- 271
PN +T +I+ LC EG + ++ +DR++ H P I ++L
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMV----EMGHKPDLITINTLVNGLCLSGKE 209
Query: 272 ------ILRMVEKG------------HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
I +MVE G +++ + G+ + + LL+++ ++N+ D+V
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ----TALAMELLRKMEERNIKLDAVK 265
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
YS+I+ + GSLD+A ++ EM M G N Y GGFC GR D+ +L+R M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
R + P TF V+I G+L E + + M+ G P +++ +++ C+ +
Sbjct: 326 KRKINPNVVTF-SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
++AN + ++ KG P T+++LI GY + + L+L+ +M + + + ++
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
IQ C GKL A++ + M SR + P++ Y+ ++ G + + L++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 173/352 (49%), Gaps = 18/352 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G + + ++ VL+V+ +S + +L ++ M +AV I+ID LCK G +
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG----S 278
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+D + E + + + I + LI G ++G + LL+ ++++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW--DDGAK---------LLRDMIKR 327
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ P+ V +S+++ + V+ G L A E+++EM+ G P++ YTS GFCKE +D+A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
+++ M +G P TF+ +I G C A R+++ L +F M G + ++++ ++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKAN--RIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ CE + A ++ + P TY +L+ G GE ++ L+++ ++E M
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ ++ +I +C K++DA ++ + + P V Y MI +KG
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 175/397 (44%), Gaps = 44/397 (11%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y ++V+ ++G A LL + +N +DAV + ++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIK-----------LDAVKY---------SII 269
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD----VYEHMI 218
+ K + AF++ +E +G ++ ++N ++ + R WD + MI
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR----WDDGAKLLRDMI 325
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ + PN VT ++ID+ KEG L R + L + M R +P I +SLI ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKL-REAEELHKEMIHR---GIAPDTITYTSLIDGFCKE 381
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
HL + + V +MV + P+ ++++++ + +D LE++ +M
Sbjct: 382 NHL---DKANQMVDLMV--------SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
+ G ++ Y + GFC+ G+++ A EL + M R + P T+ ++ G +G
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG-LCDNGES 489
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E+ L +FE + + ++ ++ +C V+ A L KG PG TY+++
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
I G KG + E L+ +ME P + +I+
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+V+ L K++ + + + S++++ R L A +++ G+EPN+ +++
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
G C EGR+ EA+EL+ M G KP T + ++ G SG+ E + + + M+ G
Sbjct: 166 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL-SGKEAEAMLLIDKMVEYGC 224
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P+ +++ ++ +C++ A L ++ ++ YS++I G G +
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ EME K + + + +I C G+ +D K L+ M R + P+V + +I S
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 534 QKGNNARVLQLCNEM 548
++G +L EM
Sbjct: 345 KEGKLREAEELHKEM 359
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 137/355 (38%), Gaps = 74/355 (20%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSH 155
+ N V ++S+ I V+ G + +A L + + + P + SLID GF +H
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT--SLID--GFCKENH 383
Query: 156 RP-------------------VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
++L+ Y K + ++ + RG ++N+
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++ ++++ ++++ M+ + PN VT KI++D LC G ++ ++ ++I
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI---- 499
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
E+ K E D Y++
Sbjct: 500 ---------------------------EKSKMEL-------------------DIGIYNI 513
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
I+H +D A +++ + + G +P Y GG CK+G + EA L R ME G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
P G T+ +++I G G + + + E + GF + +++ L + R
Sbjct: 574 HAPDGWTY-NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 230/513 (44%), Gaps = 37/513 (7%)
Query: 62 ELNDSLVEQVLLEL-KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA 120
+L SLV LL L K PN A F++ + ++ +AI V+ +
Sbjct: 68 KLTPSLVSTTLLSLVKTPNLA------FNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPV 121
Query: 121 RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCC 180
LL+ + ++ ++R + D L+ A + + DLLV+ ++R+ + A +
Sbjct: 122 TQLLKEVVTSRKN--SIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFY 179
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG 240
++ +GF + N +L +L R +R+ W Y M R N T IMI+ LCKEG
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLI----LR-MVEKGHLVEEEGKRERVAVMV 295
L++ +G + P+ + ++L+ LR +E L+ E K + +
Sbjct: 240 KLKKA----KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM 295
Query: 296 VT----------------LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
T +L+ + + LVPDSV Y++++ G L+ A +EMV
Sbjct: 296 QTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRL 398
G P + Y + G E +I+ A L+R + +G+ T++ +I G C G +
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK- 414
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ + + M+ G P+ ++ ++ LC +A+ +++ KG P + L
Sbjct: 415 -KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ G+ A G + L EM+ S+ P + +++ LC GK E+A + + MK R +
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
PD Y T+I+ + +KG+ + +EM SL
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 194/432 (44%), Gaps = 41/432 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++I I+VL + G + A+ L + P V T
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT------------------- 265
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
LVQ ++ E A + ++++GF+ + ++N +L + R S +V M
Sbjct: 266 -LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS---EVLREMKEI 321
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P++V+ I+I G L+ D ++ + P+ ++LI H
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV----KQGMVPTFYTYNTLI-------H 370
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ E K E + L++ + ++ +V DSV Y+++++ + G A +++EM+
Sbjct: 371 GLFMENKIEAAEI----LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLE 399
G +P F YTS C++ + EA EL + G+G+KP + ++ G CA G+ ++
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN--MD 484
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ + M P ++++ ++ LC E+A + + +G P +Y+ LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
GY+ KG+ + + EM P L + ++++ L + + E AE+ L+ MKS +
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 520 PDVAIYETMIAS 531
P+ + + ++I +
Sbjct: 605 PNDSSFCSVIEA 616
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 225/501 (44%), Gaps = 40/501 (7%)
Query: 41 ICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHG 100
+C + R + +D V +ELN + + + + F +S + G
Sbjct: 76 LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 101 VRSYSIAIHVLVRA----GLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
+I LV G +++A AL++ + + P V T LI+ +
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST--LINGLCL------ 187
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
K R++EA + VE GF+ ++ VL+ L +S +L D++
Sbjct: 188 -----------KGRVSEALVLIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M + V I+ID+LCK+G DAL + E + + SSLI +
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFD---DALS-LFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
G ++G + +L+ ++ +N++PD V +S ++ V+ G L A E+Y E
Sbjct: 292 NDGKW--DDGAK---------MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M+ G P++ Y S GFCKE + EA ++ M +G +P T+ ++I +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY-SILINSYCKAK 399
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
R+++ + +F + G IP+ ++++ +V C++ + A ++ +G P TY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
+L+ G GE+ + L+++ +M+ M G+ ++ +I +C K++DA ++ +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 517 LLTPDVAIYETMIASHEQKGN 537
+ PDV Y MI +KG+
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGS 540
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 170/389 (43%), Gaps = 16/389 (4%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L A+ + + C +E G + + +++ R ++ + V +
Sbjct: 76 LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ +T +++ C EG + V +DR++ ++R P + S+LI + KG +
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR----PDLVTVSTLINGLCLKGRV 191
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E + L+ R+++ PD V Y +++ + G+ AL+++ +M
Sbjct: 192 SE-----------ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+ + Y+ CK+G D+A+ L ME +G+K T+ +IG G+ ++
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS-LIGGLCNDGKWDDG 299
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ M+G IP ++F +++ + + +A ++ +G P TY+ LI G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ + + E +++ M K P + ++ +I C+ +++D + + + S+ L P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y T++ Q G +L EM S
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 182/425 (42%), Gaps = 41/425 (9%)
Query: 71 VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAK 130
VL L ++ AL F + V YSI I L + G DA +L + K
Sbjct: 216 VLNRLCKSGNSALALDLFR-KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 131 NRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
++A D V + S D AKM L E R
Sbjct: 275 -----GIKA------DVVTYSSLIGGLCNDGKWDDGAKM-LREMI--------GRNIIPD 314
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ +F++++ V + ++ ++Y MI P+ +T +ID CKE L D
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
++ S IV S+++ K V++ G R L + + + L+P+
Sbjct: 375 LMV-----SKGCEPDIVTYSILINSYCKAKRVDD-GMR---------LFREISSKGLIPN 419
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
++ Y+ +V + G L++A E+++EMV G P+ Y G C G +++A+E+
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
M+ + G ++II + ++++ +F ++ G P ++++ M+ LC+
Sbjct: 480 KMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
+ +A+ ++ + G P + TY++LI+ + + ++L EM+ +C G S
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK---VC-GFSAD 594
Query: 491 TSVIQ 495
+S I+
Sbjct: 595 SSTIK 599
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF------------- 342
+ L + ++Q +P + ++ + A R D L + M ++G
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 343 ----------------------EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPY 380
EP++ +++ GFC EGR+ EA+ L+ M +P
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
T +I G GR+ E L + + M+ GF P +++ ++ +LC++ + A
Sbjct: 175 LVTVSTLINGLCL-KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
++ ++ YS++I G + L L+ EME K + + ++S+I LC
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
GK +D K L+ M R + PDV + +I ++G +L NEM +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 158/390 (40%), Gaps = 62/390 (15%)
Query: 84 ALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDS 143
ALS F+ + V +YS I L G D +L + +N P
Sbjct: 264 ALSLFN-EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP--------- 313
Query: 144 LIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
D V F + ++D+ V+ + +L EA ++ + RG ++NS++ +
Sbjct: 314 --DVVTFSA-----LIDVFVK---EGKLLEAK-ELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
+ + +++ M+ P+ VT I+I++ CK + VD R+ E P
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK----AKRVDDGMRLFREISSKGLIP 418
Query: 264 SAIVNSSLILRMVEKGHL-----VEEEGKRERVAVMVVT---LLKRL------------- 302
+ I ++L+L + G L + +E V VVT LL L
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 303 --LQQNLVPDSVG-YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
+Q++ + +G Y++I+H +D A ++ + G +P+ Y GG CK+
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
G + EA L R M+ G P T++ +I GSG + + + E M GF +
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS-VELIEEMKVCGFSADSST 597
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFL 449
+++ L + R LDK FL
Sbjct: 598 IKMVIDMLSDRR------------LDKSFL 615
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 200/448 (44%), Gaps = 36/448 (8%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SY+I IH + + G I +A LL + K P + T
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST------------------- 286
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+V Y + + + + ++ +G + + + S++ +L R +++ + + MIR
Sbjct: 287 -VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ V +ID CK G ++ A + E +P + +++I + G
Sbjct: 346 GILPDTVVYTTLIDGFCKRG----DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+VE GK L + + L PDSV ++ +++ + G + A ++ M+ +
Sbjct: 402 MVEA-GK----------LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G PN YT+ G CKEG +D A EL+ M GL+P T++ ++ G SG +EE
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEE 509
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ + AG +++ +++ C++ ++++A L +L KG P T+++L+
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G+ G +++ KL M K + P + F S+++ C L+ A K M SR + P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
D YE ++ H + N L EM
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/562 (22%), Positives = 234/562 (41%), Gaps = 71/562 (12%)
Query: 14 VSFHKLHSHTAFPRNSNHNAV---DDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQ 70
+SF L FP S A + I + + RR+ + + R E
Sbjct: 32 LSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRA-EPLRRSLKPYECKFKTDHL 90
Query: 71 VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAK 130
+ + +K D + L FF W A++ R + + S I IH+ V + + A++L+ S +
Sbjct: 91 IWVLMKIKCDYRLVLDFFDW-ARSRR-DSNLESLCIVIHLAVASKDLKVAQSLISSFWER 148
Query: 131 NRDPGAVRAVTDSLIDAVGFV------SGSHRPVLDLLVQTYAKMRLTEAAFDV------ 178
+ VTDS + + GS V D+ Q L A V
Sbjct: 149 PK-----LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLN 203
Query: 179 --------CCNV----------------------EARGFRVSLASFNSVLHVLQRSDRVS 208
CNV G ++AS+N V+H + + R+
Sbjct: 204 YGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIK 263
Query: 209 LVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
+ M P+ ++ +++ C+ G L D + +++ KR P++ +
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIY 319
Query: 269 SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
S+I + L E E +++Q ++PD+V Y+ ++ + G +
Sbjct: 320 GSIIGLLCRICKLAEAE-----------EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
+A + + EM P+ YT+ GFC+ G + EA +L M +GL+P TF +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 389 IG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
G C AG +++ V M+ AG P+ +++ +++ LC+ D++ AN L + G
Sbjct: 429 NGYCKAG--HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
P TY+ ++ G G ++E +KL E E + +T+++ C+ G+++ A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 508 KYLKTMKSRLLTPDVAIYETMI 529
+ LK M + L P + + ++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLM 568
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y++++H +LG + A + M + G+ P+ Y++ G+C+ G +D+ +L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
+GLKP + IIG +L E F M+ G +P + + +++ C+ D+
Sbjct: 309 RKGLKPNSYIYGS-IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
A+ + + P TY+ +I G+ G++ E KL++EM K + P FT +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
I C+ G ++DA + M +P+V Y T+I ++G+ +L +EM + L
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 323 RLGSLDSALEMYEEMVMS----GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
+L DS ++ ++ +V + G +P V+ F G + EA + M GL
Sbjct: 150 KLNVTDSFVQFFDLLVYTYKDWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
++ + + + + + VF G + S++ ++ +C+ +++A+
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L + KG+ P +YS ++ GY GE+ +V KL M+ K + P ++ S+I LC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
R KL +AE+ M + + PD +Y T+I ++G+ + EM S ++
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 200/448 (44%), Gaps = 36/448 (8%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SY+I IH + + G I +A LL + K P + T
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST------------------- 286
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+V Y + + + + ++ +G + + + S++ +L R +++ + + MIR
Sbjct: 287 -VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ V +ID CK G ++ A + E +P + +++I + G
Sbjct: 346 GILPDTVVYTTLIDGFCKRG----DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+VE GK L + + L PDSV ++ +++ + G + A ++ M+ +
Sbjct: 402 MVEA-GK----------LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G PN YT+ G CKEG +D A EL+ M GL+P T++ ++ G SG +EE
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEE 509
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ + AG +++ +++ C++ ++++A L +L KG P T+++L+
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G+ G +++ KL M K + P + F S+++ C L+ A K M SR + P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
D YE ++ H + N L EM
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/562 (22%), Positives = 234/562 (41%), Gaps = 71/562 (12%)
Query: 14 VSFHKLHSHTAFPRNSNHNAV---DDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQ 70
+SF L FP S A + I + + RR+ + + R E
Sbjct: 32 LSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRA-EPLRRSLKPYECKFKTDHL 90
Query: 71 VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAK 130
+ + +K D + L FF W A++ R + + S I IH+ V + + A++L+ S +
Sbjct: 91 IWVLMKIKCDYRLVLDFFDW-ARSRR-DSNLESLCIVIHLAVASKDLKVAQSLISSFWER 148
Query: 131 NRDPGAVRAVTDSLIDAVGFV------SGSHRPVLDLLVQTYAKMRLTEAAFDV------ 178
+ VTDS + + GS V D+ Q L A V
Sbjct: 149 PK-----LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLN 203
Query: 179 --------CCNV----------------------EARGFRVSLASFNSVLHVLQRSDRVS 208
CNV G ++AS+N V+H + + R+
Sbjct: 204 YGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIK 263
Query: 209 LVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
+ M P+ ++ +++ C+ G L D + +++ KR P++ +
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL----DKVWKLIEVMKRKGLKPNSYIY 319
Query: 269 SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
S+I + L E E +++Q ++PD+V Y+ ++ + G +
Sbjct: 320 GSIIGLLCRICKLAEAE-----------EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
+A + + EM P+ YT+ GFC+ G + EA +L M +GL+P TF +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 389 IG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
G C AG +++ V M+ AG P+ +++ +++ LC+ D++ AN L + G
Sbjct: 429 NGYCKAG--HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
P TY+ ++ G G ++E +KL E E + +T+++ C+ G+++ A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 508 KYLKTMKSRLLTPDVAIYETMI 529
+ LK M + L P + + ++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLM 568
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y++++H +LG + A + M + G+ P+ Y++ G+C+ G +D+ +L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
+GLKP + IIG +L E F M+ G +P + + +++ C+ D+
Sbjct: 309 RKGLKPNSYIYGS-IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
A+ + + P TY+ +I G+ G++ E KL++EM K + P FT +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
I C+ G ++DA + M +P+V Y T+I ++G+ +L +EM + L
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 323 RLGSLDSALEMYEEMVMS----GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
+L DS ++ ++ +V + G +P V+ F G + EA + M GL
Sbjct: 150 KLNVTDSFVQFFDLLVYTYKDWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
++ + + + + + VF G + S++ ++ +C+ +++A+
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L + KG+ P +YS ++ GY GE+ +V KL M+ K + P ++ S+I LC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
R KL +AE+ M + + PD +Y T+I ++G+ + EM S ++
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 211/451 (46%), Gaps = 22/451 (4%)
Query: 81 AKTALSFFHWSAKTHRF--NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
K AL F W K +H V+ I H+LVRA + AR +L+ L+ + G
Sbjct: 90 GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS---GKSS 146
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
V +L+ + S+ V D+L++ Y + + + + ++ + GF S+ + N++L
Sbjct: 147 FVFGALMTTYRLCN-SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 205
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
+ +S VW + M++ + P+ T I+I+ LC EG +++ +M + ++
Sbjct: 206 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS----SYLMQKMEK 261
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
S ++P+ + ++++ +KG R + A + LL + + + D Y++++
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKG--------RFKAA---IELLDHMKSKGVDADVCTYNMLI 310
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
H R + + +M PN Y + GF EG++ A +L+ M GL
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
P TF+ +I G G +E L +F M G PS +S+ +++ LC+N + + A
Sbjct: 371 PNHVTFNALIDG-HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
R+ G G TY+ +I G G + E + L EM + P + ++++I C
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ G+ + A++ + + L+P+ IY T+I
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 210/472 (44%), Gaps = 49/472 (10%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++I I+VL G + L++ + P V T
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT------------------- 273
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
++ Y K +AA ++ +++++G + ++N ++H L RS+R++ + + M +
Sbjct: 274 -VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG- 279
+PN VT +I+ EG V +++ E SP+ + ++LI + +G
Sbjct: 333 MIHPNEVTYNTLINGFSNEG----KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 280 --------HLVEEEG---KRERVAVMVVTLLK------------RLLQQNLVPDSVGYSL 316
+++E +G V++ L K R+ + + + Y+
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ + G LD A+ + EM G +P+ Y++ GFCK GR A E++ + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
L P G + +I C G L+E + ++EAM+ G +F+ +V LC+ V +A
Sbjct: 509 LSPNGIIYSTLIYNCCR-MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
+ + G LP ++ LI GY GE + ++ EM P + S+++
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LC+ G L +AEK+LK++ + D +Y T++ + + GN A+ + L EM
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 191/495 (38%), Gaps = 62/495 (12%)
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
F+ K + G +Y+ I L + G + +A LL ++ DP D
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP-----------DI 478
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
V + + L+ + K+ + A ++ C + G + ++++++ R +
Sbjct: 479 VTYSA---------LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCK----------------EGLLQRNV--DAL 249
+YE MI + + T +++ +LCK +G+L V D L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 250 DRIMG-------------ERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
G E + H P+ SL+ + + GHL E E
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----------- 638
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
LK L D+V Y+ ++ A + G+L A+ ++ EMV P+S+ YTS G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
C++G+ A+ + E RG + + +G+ + + E M G P
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++ + M++ +E+ N L + ++ P TTY++L+ GY+ + +V LY
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ + P S++ +C LE K LK R + D + +I+ G
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 537 NNARVLQLCNEMASL 551
L M SL
Sbjct: 879 EINWAFDLVKVMTSL 893
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 143/329 (43%), Gaps = 22/329 (6%)
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNV---DALDRIMGERKRSSHSPSAIVNSSLILRM 275
RG PN V +D + K G + + + +D + H+P + +++I
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL-------GHTPDIVTTNAMI--- 766
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
G+ GK E+ LL + QN P+ Y++++H + + ++ +Y
Sbjct: 767 --DGY--SRMGKIEKTN----DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
++++G P+ S G C+ ++ +++++ RG++ TF+ +I C A +
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA-N 877
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
G + + + M G + D MV L N +++ L + +G P Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
LI G G+++ + EM +CP +++++ L +CGK ++A L+ M
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 516 RLLTPDVAIYETMIASHEQKGNNARVLQL 544
L P +A + T++ + GN L+L
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV 404
N VY + +EG I +++E+ R M G P T + I+G SG
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN-AILGSVVKSGEDVSVWSF 220
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
+ ML P +F+ ++ LC E+++ + ++ G+ P TY+ ++ Y
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
KG + ++L M+ K + + + +I LCR ++ L+ M+ R++ P+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 525 YETMIASHEQKGNNARVLQLCNEMASLEL 553
Y T+I +G QL NEM S L
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 140/334 (41%), Gaps = 24/334 (7%)
Query: 155 HRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVW 211
H P + ++ Y++M E D+ + + +L ++N +LH + VS +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL----------DRIMGERKRSSH 261
+Y +I P+ +T ++ +C+ +L+ + L DR S
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 262 SPSAIVNSS--LILRMVEKGHLVEEEGKRERVAVM--------VVTLLKRLLQQNLVPDS 311
+ +N + L+ M G ++++ V+V+ +L + +Q + P+S
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
Y +++ R+G + +A + EEM+ P + ++ K G+ DEA L+R
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
M L P +F ++ C +G + E L + M G +S++ ++ LC
Sbjct: 995 MLKMKLVPTIASFTTLMHLCCK-NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
D+ A + GFL TTY LI+G A+
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 15/242 (6%)
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
AFD+ + + G + + ++++ VL R+ R V M + P + +I+
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM 294
LC+ G ++ + ++ + P + S+++ + + G E
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKI----CPPNVAESAMVRALAKCGKADE----------- 987
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
LL+ +L+ LVP ++ ++H + G++ ALE+ M G + + Y
Sbjct: 988 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1047
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
G C +G + A EL M+G G T+ +I G A + + +L GFI
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
Query: 415 PS 416
S
Sbjct: 1108 TS 1109
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 236/543 (43%), Gaps = 53/543 (9%)
Query: 40 AICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNH 99
A+ ++ W + + N+ L Q++ DP+ L ++ W K +
Sbjct: 44 AVIADLIEKQHWSKLGVHVTDINPNE-LFRQLISSELDPD---LCLRYYSWLVKNSDISV 99
Query: 100 GVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTD----SLIDAVGFVSGS- 154
+ +H L A + R+ L+ G VR +D S+ A+
Sbjct: 100 SLELTFKLLHSLANAKRYSKIRSFLD---------GFVRNGSDHQVHSIFHAISMCDNVC 150
Query: 155 -HRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
+ + D+LV YA E F+ G+++S S ++ L + +R + V V
Sbjct: 151 VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYV 210
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
Y+ MIR + PN T ++I+ALCK G + + D +M + K SP+ + ++LI
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD----VMEDMKVYGCSPNVVSYNTLID 266
Query: 274 RMVE--------KGHLVEEEGKRERVAVMVVT-------------------LLKRLLQQN 306
+ K V +E V+ + T + K +L Q+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
+ P+ + Y+ +++ G + A+ M ++MV +G +PN Y + GFCK + EA+
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
++ ++G+G P ++ ++I G++++ + E M G +P +++ ++
Sbjct: 387 DMFGSVKGQGAVPTTRMYN-MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LC N ++E A +L KG LP T+ +L++GY KGE ++ L EM + P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTM-KSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
+ V++ C+ G L+ A M K R L +VA Y ++ + QKG L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 546 NEM 548
NEM
Sbjct: 565 NEM 567
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 131/266 (49%), Gaps = 4/266 (1%)
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
+E + V + K ++++ + P+ ++++++A + G ++ A ++ E+M + G PN
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 348 VYTSFTGGFCK---EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV 404
Y + G+CK G++ +A +++ M + P TF+ +I G L + V
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD-NLPGSMKV 318
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
F+ ML P+ +S++ ++ LC + +A + +++ G P TY+ LI G+
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
++E L ++ ++ + P ++ +I C+ GK++D + M+ + PDV
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 525 YETMIASHEQKGNNARVLQLCNEMAS 550
Y +IA + GN +L +++ S
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTS 464
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 212/488 (43%), Gaps = 42/488 (8%)
Query: 82 KTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT 141
++ +FF + + F V +Y + L + T+A++L+E L + + +V
Sbjct: 99 RSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIE-LVVSRKGKNSASSVF 157
Query: 142 DSLIDA-----VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
SL++ GF+ +D L+ TY + A F V + +
Sbjct: 158 ISLVEMRVTPMCGFL-------VDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN 210
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
+L + + + +W Y ++ N I+++ CKEG N+ ++ E
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEG----NISDAQKVFDEI 266
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEE-------EGKRERVAVMVVT------------ 297
+ S P+ + ++LI + G+L E E R R V +
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 298 -----LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
L + ++ L+P+ V ++ ++H R G +D E Y++M+ G +P+ +Y +
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
GFCK G + A ++ GM RGL+P T+ +I G G G +E L + + M G
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG-GDVETALEIRKEMDQNG 445
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
+ F +V +C+ V A L +L G P + TY++++ + KG+ Q
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
KL EM+ P + + ++ LC+ G++++A+ L M + + PD Y T++ H
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Query: 533 EQKGNNAR 540
+ N+++
Sbjct: 566 HRHANSSK 573
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 201/452 (44%), Gaps = 44/452 (9%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG-SHRPVLDL 161
+++ IH L R ++A AL++ + K P V T ++ V+G R +DL
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV---TYGIV-----VNGLCKRGDIDL 239
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
+ KM E + +N+++ L V+ +++ M
Sbjct: 240 ALSLLKKM-------------EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN VT +I LC G R DA R++ + +P+ + S+LI V++G L
Sbjct: 287 IRPNVVTYNSLIRCLCNYG---RWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
VE E L ++++++ PD YS +++ LD A M+E M+
Sbjct: 343 VEAE-----------KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
PN Y + GFCK R+DE MEL R M RGL T+ +I G + EC
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI----HGFFQAREC 447
Query: 402 LG---VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
VF+ M+ G +P +++ +++ LC N VE A L P TY+++
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I+G G+V++ L+ + K + P + +T+++ CR G E+A+ + MK
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
PD Y T+I +H + G+ A +L EM S
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 222/476 (46%), Gaps = 51/476 (10%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
+H + +YSI I+ R ++ A A+L + +P V +SL++ GF G+
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIV--TLNSLLN--GFCHGN--- 165
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
R+++A V VE G++ +FN+++H L R +R S + + M
Sbjct: 166 ------------RISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P+ VT I+++ LCK G ++D ++ + ++ P ++ +++I +
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRG----DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 278 KGHL---------VEEEGKRERVAVM---------------VVTLLKRLLQQNLVPDSVG 313
++ ++ +G R V LL ++++ + P+ V
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
+S ++ A V+ G L A ++Y+EM+ +P+ F Y+S GFC R+DEA + M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 374 GRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ P T++ +I G C A R++E + +F M G + + +++ ++ + R+
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKA--KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+ A +++ G LP TYS+L+ G G+V+ L ++ ++ M P + +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+I+ +C+ GK+ED ++ + + P+V Y TM++ +KG L EM
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 1/255 (0%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+V++L +++ + + YS++++ R L AL + +M+ G+EP+ S
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
GFC RI +A+ L+ M G +P TF+ +I G R E + + + M+ G
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR-HNRASEAVALVDRMVVKGC 217
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P +++ +V LC+ D++ A + L ++ PG Y+ +I V + L
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ EM+ K + P + + S+I+CLC G+ DA + L M R + P+V + +I +
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 534 QKGNNARVLQLCNEM 548
++G +L +EM
Sbjct: 338 KEGKLVEAEKLYDEM 352
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V L +++ P V +S ++ A ++ D + + E+M G N + Y+
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC 125
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FC+ ++ A+ ++ M G +P T + ++ G G+ R+ + + + M+ G+ P
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN-RISDAVSLVGQMVEMGYQP 184
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
+F+ ++ L + +A A + R++ KG P TY +++ G +G++ L L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ME + PG+ ++ ++I LC + DA M ++ + P+V Y ++I
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
LD A+ ++ +MV S P+ ++ K + D + L M+ G+ T+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS- 120
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
++I C +L L V M+ G+ P ++ + ++ C + A + + ++++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ P T++ LI G E + L M K P L + V+ LC+ G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LK M+ + P V IY T+I + N L L EM
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 217/464 (46%), Gaps = 51/464 (10%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
+H + +Y+I I+ R I+ A ALL + +P V SL++ G+ G
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV--TLSSLLN--GYCHGK--- 169
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
R+++A V VE G+R +F +++H L ++ S + + M
Sbjct: 170 ------------RISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
++ PN VT ++++ LCK G ++D ++ + + + + ++ S++I + +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRG----DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 278 KGH-------LVEEEGKRERVAVMVVT-----------------LLKRLLQQNLVPDSVG 313
H E E K R V+ + LL ++++ + P+ V
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++ ++ A V+ G L A ++Y+EM+ +P+ F Y+S GFC R+DEA + M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 374 GRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ P T++ +I G C A R++E + +F M G + + +++ ++ + RD
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAK--RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+ A +++ G P TY+ L+ G G++++ + ++ ++ M P + +
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+I+ +C+ GK+ED ++ + + PDV IY TMI+ +KG
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 163/349 (46%), Gaps = 16/349 (4%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIM 232
+ AF++ +EA ++ +++V+ L + +++ M PN +T +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 233 IDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
I LC +R DA R++ + +P+ + ++LI V++G LVE E
Sbjct: 302 ISCLCN---YERWSDA-SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE------- 350
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
L ++++++ PD YS +++ LD A M+E M+ PN Y +
Sbjct: 351 ----KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
GFCK RIDE +EL R M RGL T+ +I G + VF+ M+ G
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSDG 465
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
P+ ++++ +++ LC+N +E+A L P TY+++I+G G+V++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
L+ + K + P + ++ ++I CR G E+A+ + M+ PD
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 174/400 (43%), Gaps = 27/400 (6%)
Query: 144 LIDAVGFVSG--SHRPV-----LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
L DA+G G RP+ + L+ AKM+ + + ++ G +L ++N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI--MG 254
+++ R ++SL + M++ P+ VTL +++ C + V +D++ MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 255 ERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY 314
R P I ++LI G + + A V L+ R++Q+ P+ V Y
Sbjct: 186 YR------PDTITFTTLI-----HGLFLHNK------ASEAVALVDRMVQRGCQPNLVTY 228
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
++V+ + G +D A + +M + E N +Y++ CK D+A+ L ME
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
+G++P T+ +I C R + + M+ P+ ++F+ +++ + +
Sbjct: 289 KGVRPNVITYSS-LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
+A ++ + P TYS LI G+ + E ++ M K P + + ++I
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
C+ ++++ + + M R L + Y T+I Q
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+V++L +++ + + + Y+++++ R + AL + +M+ G+EP+ +S
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
G+C RI +A+ L+ M G +P TF +I G + E + + + M+ G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL-HNKASEAVALVDRMVQRGC 221
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P+ +++ +V LC+ D++ A L ++ YS +I + L
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ EME K + P + ++S+I CLC + DA + L M R + P+V + +I +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 534 QKGNNARVLQLCNEM 548
++G +L +EM
Sbjct: 342 KEGKLVEAEKLYDEM 356
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
LD A+ ++ MV S P+ F + K + D + L M+ G+ T++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN- 124
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
++I C ++ L + M+ G+ PS ++ ++ C + + A A + ++++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ P T++ LI G + E + L M + P L + V+ LC+ G ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
L M++ + +V IY T+I S + + L L EM
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 197/460 (42%), Gaps = 42/460 (9%)
Query: 71 VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAK 130
V+ L+ + AL FF A ++ F H ++ + I L G + + LL+ + +
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 131 NRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
D I ++ Y ++ L E A ++ ++ G S
Sbjct: 106 -----GFHCSEDLFIS---------------VISVYRQVGLAERAVEMFYRIKEFGCDPS 145
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ +N VL L +R+ +++ VY M R PN T +++ ALCK VD
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK----NNKVDGAK 201
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
+++ E P A+ +++I M E G LV+E R L + P
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVG-LVKE---------------GRELAERFEPV 245
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
Y+ +++ + A E+ EMV G PN Y++ C G+I+ A +
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAML-GAGFIPSCLSFDKMVEKLCE 429
M RG P T ++ GC G + L ++ M+ G G P+ ++++ +V+ C
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFL-RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ ++ +A + + + + G P TY LI G+A +G + + ++ +M CP + V
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+T++++ LCR K ++AE ++ M P V + I
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 190/450 (42%), Gaps = 28/450 (6%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT-DSLIDAVGFV 151
K F V +Y++ + L + + A+ LL ++ K P AV T S + VG V
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 152 SGSHR------PVLDL---LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
PV+ + L+ K + AF++ + +G ++ S++++++VL
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
S ++ L + M++ +PN TL ++ G DALD +
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG---TTFDALDLWNQMIRGFGLQ 349
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P+ + ++L+ G++V+ V++ + + P+ Y +++
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVK-----------AVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
+ GSLD A+ ++ +M+ SG PN VYT+ C+ + EA L+ M P
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI-PSCLSFDKMVEKLCENRDVEQANANLT 441
TF+ I G +GRL+ VF M P+ ++++++++ L + +E+A
Sbjct: 459 TFNAFIKG-LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
+ +G +TY+ L+ G G L+L +M P +I C+ G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 502 KLEDAEKYLKTMKS--RLLTPDVAIYETMI 529
K E A + L + R PDV Y +I
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 30/248 (12%)
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-C 391
+Y +M GFEPN F Y CK ++D A +L+ M +G P ++ VI C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 392 AAG--------SGRLEECLGVFEAMLGA--------------------GFIPSCLSFDKM 423
G + R E + V+ A++ G P+ +S+ +
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM-EYKS 482
+ LC + +E A + LT++L +G P T S L+KG +G + L L+ +M
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVL 542
+ P + + +++Q C G + A M+ +P++ Y ++I ++G+ +
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 543 QLCNEMAS 550
+ N+M +
Sbjct: 408 YIWNKMLT 415
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 132/316 (41%), Gaps = 50/316 (15%)
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY-------SLIVHAKVRL-------- 324
HL+ E + + V +KRL Q++ VP ++ + +L H +
Sbjct: 30 HLLTESPNHAEIKELDV--VKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLA 87
Query: 325 --GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
G +DS + ++M + GF + ++ S + + G + A+E+ ++ G P +
Sbjct: 88 MDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVK 147
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
++HV+ G R++ V+ M GF P+ +++ +++ LC+N V+ A L
Sbjct: 148 IYNHVL-DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 206
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQE------------------------------VL 472
+ +KG P +Y+ +I G V+E
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAF 266
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
+L EM K + P + ++++I LC G++E A +L M R P++ +++
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 533 EQKGNNARVLQLCNEM 548
+G L L N+M
Sbjct: 327 FLRGTTFDALDLWNQM 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 157/385 (40%), Gaps = 43/385 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SYS I+VL +G I A + L + + P SL+ F+ G+ LD
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY--TLSSLVKGC-FLRGTTFDALD 337
Query: 161 L-------------------LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVL 201
L LVQ + A V ++E G ++ ++ S+++
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 202 QRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSH 261
+ + ++ M+ PN V M++ALC+ + ++L IM + +
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF-KEAESLIEIMS---KENC 453
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS-VGYSLIVHA 320
+PS ++ I + + G L E + +++ QQ+ P + V Y+ ++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAE-----------KVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPY 380
+ ++ A + E+ M G E +S Y + G C G A++L+ M G P
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAG---FIPSCLSFDKMVEKLCENRDVEQAN 437
T + +I+ G+ E + + ++ G + P +S+ ++ LC + E
Sbjct: 563 EITMNMIILA-YCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGY 462
L R++ G +P T+S+LI +
Sbjct: 621 ILLERMISAGIVPSIATWSVLINCF 645
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 178/366 (48%), Gaps = 18/366 (4%)
Query: 184 ARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQ 243
ARG + L ++ +V++ L + + L + + M +G+ + V +IDALC
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN----Y 268
Query: 244 RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
+NV+ + E P+ + +SLI + G + LL ++
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS-----------RLLSDMI 317
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
++ + P+ V +S ++ A V+ G L A ++Y+EM+ +P+ F Y+S GFC R+D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
EA + M + P T++ +I G C A R+EE + +F M G + + ++++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAK--RVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
+++ L + D + A +++ G P TYS+L+ G G++++ L ++ ++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVL 542
M P + + +I+ +C+ GK+ED ++ + + P+V IY TMI+ +KG
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 543 QLCNEM 548
L EM
Sbjct: 556 ALFREM 561
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 199/449 (44%), Gaps = 38/449 (8%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG-SHRPVLDL 161
+++ IH L ++A AL++ + A+ P L V+G R +DL
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQP--------DLFTYGTVVNGLCKRGDIDL 238
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
+ KM + DV + +++ L V+ +++ M
Sbjct: 239 ALSLLKKMEKGKIEADV-------------VIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN VT +I LC G R DA R++ + +P+ + S+LI V++G L
Sbjct: 286 IRPNVVTYNSLIRCLCNYG---RWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
VE E L ++++++ PD YS +++ LD A M+E M+
Sbjct: 342 VEAE-----------KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
PN Y + GFCK R++E MEL R M RGL T++ +I G +G +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ-AGDCDMA 449
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+F+ M+ G P +++ +++ LC+ +E+A L P TY+++I+G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
G+V++ L+ + K + P + ++T++I CR G E+A+ + MK P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y T+I + + G+ A +L EM S
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRS 598
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 22/315 (6%)
Query: 242 LQRNV-------DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM 294
L RNV DA+D + GE +S PS +VE L+ K + +
Sbjct: 51 LSRNVLLDLKLDDAVD-LFGEMVQSRPLPS----------IVEFNKLLSAIAKMNKFD-L 98
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V++L +R+ + D Y+++++ R L AL + +M+ G+EP+ +S
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 158
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
G+C RI EA+ L+ M +P TF+ +I G + E + + + M+ G
Sbjct: 159 GYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL-HNKASEAVALIDRMVARGCQ 217
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT-YSLLIKGYAAKGEVQEVLK 473
P ++ +V LC+ D++ A +L + ++KG + + Y+ +I V + L
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ EM+ K + P + + S+I+CLC G+ DA + L M R + P+V + +I +
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 534 QKGNNARVLQLCNEM 548
++G +L +EM
Sbjct: 337 KEGKLVEAEKLYDEM 351
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 32/357 (8%)
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
A ++ ++ +G R ++ ++NS++ L R S + MI + PN VT +ID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL------RMVEKGHLVEEEGKR 288
A KEG L V+A +++ E + S P SSLI R+ E H+ E +
Sbjct: 334 AFVKEGKL---VEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 289 ERVAVMV------------------VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSA 330
+ +V + L + + Q+ LV ++V Y+ ++ + G D A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 331 LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG 390
+++++MV G P+ Y+ G CK G++++A+ + ++ ++P T++ +I G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 391 -CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL 449
C AG ++E+ +F ++ G P+ + + M+ C E+A+A + + G L
Sbjct: 510 MCKAG--KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
P TY+ LI+ G+ +L EM S + VI L G+LE +
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 200/448 (44%), Gaps = 36/448 (8%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+++ IH L ++A AL++ + AK P V ++
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV--------------------TYGVV 227
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
V K T+ AF++ +E + +N+++ L + + ++++ M
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
PN VT +I LC G R DA R++ + +P S+LI V++G LV
Sbjct: 288 RPNVVTYSSLISCLCNYG---RWSDA-SRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
E E L ++++++ P V YS +++ LD A +M+E MV
Sbjct: 344 EAE-----------KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
P+ Y + GFCK R++E ME+ R M RGL T++ +I G +G +
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ-AGDCDMAQ 451
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+F+ M+ G P+ ++++ +++ LC+N +E+A L P TY+++I+G
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
G+V++ L+ + K + P + + ++I CR G E+A+ K MK P+
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 523 AIYETMIASHEQKGNNARVLQLCNEMAS 550
Y T+I + + G+ +L EM S
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 207/474 (43%), Gaps = 49/474 (10%)
Query: 99 HGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPV 158
H +YSI I+ R + A A+L + +P V
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIV--------------------T 153
Query: 159 LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI 218
L L+ Y + A + + G++ + +FN+++H L ++ S + + M+
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
P+ VT ++++ LCK G + D ++ + ++ P ++ +++I + +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRG----DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 279 GHL---------VEEEGKRERVAVM---------------VVTLLKRLLQQNLVPDSVGY 314
H+ +E +G R V LL ++++ + PD +
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
S ++ A V+ G L A ++Y+EMV +P+ Y+S GFC R+DEA ++ M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
+ P T++ +I G R+EE + VF M G + + ++++ +++ L + D +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
A ++ G P TY+ L+ G G++++ + ++ ++ M P + + +I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ +C+ GK+ED + + + PDV Y TMI+ +KG+ L EM
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 14/316 (4%)
Query: 234 DALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAV 293
+ L + GL + +D + GE +S PS ++E L+ K + V
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPS----------IIEFSKLLSAIAKMNKFDV 99
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
V++L +++ + + YS++++ R L AL + +M+ G+EPN +S
Sbjct: 100 -VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
G+C RI EA+ L+ M G +P TF+ +I G + E + + + M+ G
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL-HNKASEAMALIDRMVAKGC 217
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL-PGETTYSLLIKGYAAKGEVQEVL 472
P +++ +V LC+ D + A NL +++G L PG Y+ +I G + + L
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLA-FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
L+ EME K + P + ++S+I CLC G+ DA + L M R + PDV + +I +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 533 EQKGNNARVLQLCNEM 548
++G +L +EM
Sbjct: 337 VKEGKLVEAEKLYDEM 352
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 166/389 (42%), Gaps = 16/389 (4%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ AKM + + ++ G + +++ +++ R ++ L V M++
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN VTL +++ C + V +D++ + + P+ + ++LI G
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMF----VTGYQPNTVTFNTLI-----HGLF 197
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ + A + L+ R++ + PD V Y ++V+ + G D A + +M
Sbjct: 198 LHNK------ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
EP +Y + G CK +D+A+ L + ME +G++P T+ +I C GR +
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS-LISCLCNYGRWSDA 310
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ M+ P +F +++ + + +A ++ + P TYS LI G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ + E +++ M K P + + ++I+ C+ ++E+ + + M R L +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y +I Q G+ ++ EM S
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGF----- 150
+ N V ++S I V+ G + +A L + + ++ DP V SLI+ GF
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV--TYSSLIN--GFCMHDR 376
Query: 151 -----------VSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
VS P + L++ + K + E +V + RG + ++N
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++ L ++ + ++++ M+ PN +T ++D LCK G L++ + + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL---- 492
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+RS P+ + +I M + G + E+G L L + + PD V Y+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKV--EDG---------WDLFCNLSLKGVKPDVVAYNT 541
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ R GS + A +++EM G PNS Y + ++G + + EL++ M G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 377 L 377
Sbjct: 602 F 602
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 216/467 (46%), Gaps = 53/467 (11%)
Query: 87 FFHWSAKTHRFN---------------HGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
FF A+T +FN H + + +I I+ R A ++L +
Sbjct: 94 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 132 RDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSL 191
+P ++LI + F+ G +++EA V VE G + +
Sbjct: 154 YEPDT--TTFNTLIKGL-FLEG----------------KVSEAVVLVDRMVE-NGCQPDV 193
Query: 192 ASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDR 251
++NS+++ + RS SL D+ M + T +ID+LC++G +DA
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC----IDAAIS 249
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
+ E + S + +SL+ + + G +G LLK ++ + +VP+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKW--NDG---------ALLLKDMVSREIVPNV 298
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
+ +++++ V+ G L A E+Y+EM+ G PN Y + G+C + R+ EA ++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 372 MEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
M P TF +I G C R+++ + VF + G + + +++ +V+ C++
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVK--RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
++ A ++ G LP TY +L+ G G++++ L+++ +++ M G+ ++
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
T++I+ +C+ GK+EDA ++ + + P+V Y MI+ +KG+
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 18/362 (4%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
SL F+ + R+ + +LV D + + N TL IMI+ C+ L
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
++M + + P ++LI + +G + E V L+ R+++ P
Sbjct: 147 GKVM----KLGYEPDTTTFNTLIKGLFLEGKVSE-----------AVVLVDRMVENGCQP 191
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D V Y+ IV+ R G AL++ +M + + F Y++ C++G ID A+ L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 370 RGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+ ME +G+K T++ ++ G C AG + + + + M+ +P+ ++F+ +++
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAG--KWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+ +++AN ++ +G P TY+ L+ GY + + E + M P +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
FTS+I+ C +++D K + + R L + Y ++ Q G +L EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 549 AS 550
S
Sbjct: 430 VS 431
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 195/445 (43%), Gaps = 37/445 (8%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+++ I L G +++A L++ + P V +S+++ + SG LDLL
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV--TYNSIVNGI-CRSGDTSLALDLL 216
Query: 163 -----------VQTYAKM-------RLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS 204
V TY+ + +AA + +E +G + S+ ++NS++ L ++
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 205 DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS 264
+ + + + M+ PN +T +++D KEG LQ + + E SP+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA----NELYKEMITRGISPN 332
Query: 265 AIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
I ++L+ + L E +L +++ PD V ++ ++ +
Sbjct: 333 IITYNTLMDGYCMQNRLSEANN-----------MLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
+D ++++ + G N+ Y+ GFC+ G+I A EL + M G+ P T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
++ G +G+LE+ L +FE + + + + ++E +C+ VE A L
Sbjct: 442 GILLDG-LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
KG P TY+++I G KG + E L +ME P + ++I+ R G L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMI 529
+ K ++ MKS + D + + +I
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVI 585
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ L + +++ +P V +S A R + L+ +++ ++G N +
Sbjct: 73 IALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINC 132
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FC+ + A ++ + G +P TF+ +I G G++ E + + + M+ G P
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL-EGKVSEAVVLVDRMVENGCQP 191
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++++ +V +C + D A L ++ ++ TYS +I G + + L+
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
EME K + + + S+++ LC+ GK D LK M SR + P+V + ++ ++
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 536 GNNARVLQLCNEMAS 550
G +L EM +
Sbjct: 312 GKLQEANELYKEMIT 326
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 162/330 (49%), Gaps = 19/330 (5%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ +T +MI CK G + + LDR+ S SP + ++++ + + G L +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM-------SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ +L R+LQ++ PD + Y++++ A R + A+++ +EM G
Sbjct: 223 -----------AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
P+ Y G CKEGR+DEA++ + M G +P T + +I+ +GR +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN-IILRSMCSTGRWMDAEK 330
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ ML GF PS ++F+ ++ LC + +A L ++ G P +Y+ L+ G+
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+ ++ ++ M + P + + +++ LC+ GK+EDA + L + S+ +P +
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 524 IYETMIASHEQKGNNARVLQLCNEMASLEL 553
Y T+I + G + ++L +EM + +L
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 156/327 (47%), Gaps = 16/327 (4%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ VT ++++ +CKEG L + + + + S P+ I ++ ++ M G ++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAI----KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
E LL +L++ P V ++++++ R G L A+++ E+M G +
Sbjct: 328 AE-----------KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
PNS Y GFCKE ++D A+E + M RG P T++ ++ G++E+ +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGKVEDAVE 435
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ + G P ++++ +++ L + +A L + K P TYS L+ G +
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+G+V E +K ++E E + P F S++ LC+ + + A +L M +R P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 524 IYETMIASHEQKGNNARVLQLCNEMAS 550
Y +I +G L+L NE+ +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCN 582
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 181/383 (47%), Gaps = 36/383 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +Y+I I R + A LL+ + RD G V +
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEM----RDRGCTPDVV----------------TYN 278
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+LV K + A ++ + G + ++ + N +L + + R + M+R
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ VT I+I+ LC++GLL R +D L+++ + P+++ + L+ H
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKM----PQHGCQPNSLSYNPLL-------H 387
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+E K +R + L+R++ + PD V Y+ ++ A + G ++ A+E+ ++
Sbjct: 388 GFCKEKKMDRA----IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G P Y + G K G+ +A++L+ M + LKP T+ ++G + G+++E
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS-LVGGLSREGKVDE 502
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ F G P+ ++F+ ++ LC++R ++A L ++++G P ET+Y++LI+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 461 GYAAKGEVQEVLKLYYEMEYKSM 483
G A +G +E L+L E+ K +
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 161/339 (47%), Gaps = 16/339 (4%)
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ ++N++L L S ++ +V + M++ YP+ +T I+I+A C++ + + LD
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
E + +P + + L+ + ++G L E + L + P+
Sbjct: 264 ----EMRDRGCTPDVVTYNVLVNGICKEGRLDE-----------AIKFLNDMPSSGCQPN 308
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
+ +++I+ + G A ++ +M+ GF P+ + C++G + A++++
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
M G +P +++ ++ G +++ + E M+ G P ++++ M+ LC++
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCK-EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
VE A L +L KG P TY+ +I G A G+ + +KL EM K + P +
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+S++ L R GK+++A K+ + + P+ + +++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 21/290 (7%)
Query: 267 VNSSLILRMVE-KGHLVE-------EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
VNSS L VE HL + EEG + L+ ++ VPD + + ++
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFK---------FLENMVYHGNVPDIIPCTTLI 144
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
RLG A ++ E + SG P+ Y G+CK G I+ A+ ++ M +
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VS 201
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
P T++ I+ SG+L++ + V + ML P +++ ++E C + V A
Sbjct: 202 PDVVTYN-TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L + D+G P TY++L+ G +G + E +K +M P + +++ +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G+ DAEK L M + +P V + +I +KG R + + +M
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 71/318 (22%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
F+ V +++I I+ L R GL+ A +LE + P ++ S+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL----------------SYN 383
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
P +LH + ++ + E
Sbjct: 384 P---------------------------------------LLHGFCKEKKMDRAIEYLER 404
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M+ YP+ VT M+ ALCK+G ++ V+ L+++ + SP I +++I +
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK----GCSPVLITYNTVIDGLA 460
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
+ G + GK + LL + ++L PD++ YS +V R G +D A++ + E
Sbjct: 461 KAG----KTGK-------AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
G PN+ + S G CK + D A++ + M RG KP ET ++I A G
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP-NETSYTILIEGLAYEG 568
Query: 397 RLEECLGVFEAMLGAGFI 414
+E L + + G +
Sbjct: 569 MAKEALELLNELCNKGLM 586
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 229/526 (43%), Gaps = 33/526 (6%)
Query: 37 VAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELK---DPNDAKTALSFFHWSAK 93
+A +IC + + + + K S L ++ QV+ EL + SFF W+
Sbjct: 13 IAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDS 72
Query: 94 THRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG 153
H ++S I +L + A LL+ LA R+ + V SL+ V
Sbjct: 73 LPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLA--QRELLSSPLVLRSLVGGVSEDPE 130
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
V L+ YAK + + V + + G + L + +L+ L + VW +
Sbjct: 131 DVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKI 190
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
++ M++ N +++ A K G + + ++++ E + P ++LI
Sbjct: 191 FKKMVKLGVVANIHVYNVLVHACSKSG----DPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 274 RMVEKG-HL----VEEEGKRERVAVMVVTL------------------LKRLLQQNLVPD 310
+K H V++ +R VA +VT L R ++ ++ +
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN 306
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
V Y+ ++ R+ +D AL + E M GF P Y S C++GRI EA L+
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
M G+ ++P T + +I + + V + M+ +G S+ ++ C+
Sbjct: 367 EMSGKKIEPDNITCN-TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
++E A L +++KGF PG TYS L+ G+ + + E+ KL E E + +C ++++
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+I+ +C+ +++ A+ ++M+ + L D I+ TM ++ + G
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 158/393 (40%), Gaps = 37/393 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
+ Y++ +H ++G A LL + K P T
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT------------------- 243
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ Y K + A V +E G ++ ++NS +H R R+ ++ I+
Sbjct: 244 -LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKD 301
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
N VT +ID C+ ++D R+ + SP + +S++ ++ E G
Sbjct: 302 DVTANHVTYTTLIDGYCR----MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGR 357
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ E R LL + + + PD++ + +++A ++ + SA+++ ++M+ S
Sbjct: 358 I--REANR---------LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G + + + Y + GFCK ++ A E + M +G P T+ ++ G + +E
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG-FYNQNKQDE 465
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ E G + ++ ++C+ V+ A + KG + ++ +
Sbjct: 466 ITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAY 525
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
Y G+V E L+ M + + L ++ S+
Sbjct: 526 AYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 197/471 (41%), Gaps = 85/471 (18%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
D KTAL+F HW ++ R+ H V SY+ + +L+ G + G V
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV-----------------GVVFK 144
Query: 140 VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLH 199
+ +I + V G VLDL + R F++ +++ + +N++L+
Sbjct: 145 IRLLMIKSCDSV-GDALYVLDLCRKMNKDER-----FEL-------KYKLIIGCYNTLLN 191
Query: 200 VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L R V + VY M+ + PN T M++ CK G NV+ ++ +
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG----NVEEANQYVS----- 242
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
++VE G L PD Y+ ++
Sbjct: 243 --------------KIVEAG---------------------------LDPDFFTYTSLIM 261
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ LDSA +++ EM + G N YT G C RIDEAM+L M+ P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T+ V+I GS R E L + + M G P+ ++ +++ LC E+A
Sbjct: 322 TVRTYT-VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L ++L+KG +P TY+ LI GY +G +++ + + ME + + P + +I+ C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN---NARVLQLCNE 547
+ A L M R + PDV Y ++I + GN R+L L N+
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 178/377 (47%), Gaps = 19/377 (5%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+++ A ++ +E G + ++ ++ ++ L + ++ M+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN +T +I+ CK G+++ VD ++ +M RK S P+ + LI KG+
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVE-LMESRKLS---PNTRTYNELI-----KGY 438
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
K + +L ++L++ ++PD V Y+ ++ + R G+ DSA + M
Sbjct: 439 CKSNVHK-------AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLE 399
G P+ + YTS CK R++EA +L +E +G+ P + +I G C AG +++
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG--KVD 549
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
E + E ML +P+ L+F+ ++ LC + +++A +++ G P +T ++LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G+ + +M P +T+ IQ CR G+L DAE + M+ ++
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 520 PDVAIYETMIASHEQKG 536
PD+ Y ++I + G
Sbjct: 670 PDLFTYSSLIKGYGDLG 686
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 179/409 (43%), Gaps = 50/409 (12%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ Y + + ++AF V + +G R + ++ ++H L + R+ D++ M
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+P T ++I +LC +R +AL+ ++ E + + P+ + LI + +
Sbjct: 319 CFPTVRTYTVLIKSLCGS---ERKSEALN-LVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E RE LL ++L++ L+P+ + Y+ +++ + G ++ A+++ E M
Sbjct: 375 ---EKARE--------LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 342 FEPNSFVYTSFTGGFCKE----------------------------------GRIDEAME 367
PN+ Y G+CK G D A
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 368 LMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
L+ M RGL P T+ +I S R+EE +F+++ G P+ + + +++
Sbjct: 484 LLSLMNDRGLVPDQWTYTS-MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
C+ V++A+ L ++L K LP T++ LI G A G+++E L +M + P +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 488 SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
S T +I L + G + A + M S PD Y T I ++ ++G
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 177/455 (38%), Gaps = 55/455 (12%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
+ +Y++ I L AR LL + K P + +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI--------------------TYN 397
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ Y K + E A DV +E+R + ++N ++ +S+ V V M+
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLER 456
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
+ P+ VT +ID C+ G N D+ R++ P +S+I + K
Sbjct: 457 KVLPDVVTYNSLIDGQCRSG----NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-KSK 511
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
VEE L L Q+ + P+ V Y+ ++ + G +D A M E+M+
Sbjct: 512 RVEE----------ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
PNS + + G C +G++ EA L M GL+P T D ++I G +
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST-DTILIHRLLKDGDFDH 620
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
F+ ML +G P ++ ++ C + A + ++ + G P TYS LIK
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC--RCGKLEDAEKYLKTMKSRL- 517
GY G+ + M P F S+I+ L + GK + +E L M + +
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 518 ---------------LTPDVAIYETMIASHEQKGN 537
+TP+ YE +I + GN
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 155/380 (40%), Gaps = 53/380 (13%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
++ + K + E A D+ ++E +G ++ + +++ ++ +V + E M+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN++T +I LC +G L+ ++++ + P+ ++ LI R+++ G
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMV----KIGLQPTVSTDTILIHRLLKDGDF 618
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ +++L PD+ Y+ + R G L A +M +M +G
Sbjct: 619 DHAYSR-----------FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI-------IGCAAG 394
P+ F Y+S G+ G+ + A ++++ M G +P TF +I G G
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 395 SG----------RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN---RDVEQANANLT 441
S + + + E M+ P+ S++K++ +CE R E+ ++
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF----------- 490
R ++G P E ++ L+ + E K+ +M P L
Sbjct: 788 R--NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 491 -----TSVIQCLCRCGKLED 505
TSV Q L +CG ED
Sbjct: 846 EKERGTSVFQNLLQCGYYED 865
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 160/391 (40%), Gaps = 35/391 (8%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
N V Y+ I +AG + +A +LE + +KN P ++ ++LI G +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL--TFNALIH--GLCADGKLK 584
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
LL + K+ G + ++++ ++H L + + ++ M
Sbjct: 585 EATLLEEKMVKI----------------GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P+A T I C+EG R +DA D +M + + + SP SSLI +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREG---RLLDAED-MMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 278 KG--HLVEEEGKR------ERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
G + + KR E ++L+K LL+ G + A + D+
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK-GSEPELCAMSNMMEFDT 743
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME-GRGLKPYGETFDHVI 388
+E+ E+MV PN+ Y G C+ G + A ++ M+ G+ P F+ +
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN-AL 802
Query: 389 IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
+ C + E V + M+ G +P S ++ L + + E+ + LL G+
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 449 LPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
E + ++I G +G V+ +L+ ME
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 387 VIIGCA-------AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
+IIGC A G ++E V+ ML P+ +++KMV C+ +VE+AN
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
++++++ G P TY+ LI GY + ++ K++ EM K +T +I LC
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
++++A MK P V Y +I S + L L EM
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 215/507 (42%), Gaps = 64/507 (12%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAV------------RAV 140
+T +H + +YSI I+ R ++ A A+L + +P V + +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 141 TDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEA---RGFRVSLASFNSV 197
+D++ V ++P + L A + V+ RG + L ++ +V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD------- 250
++ L + + L + + M +G+ + V +ID LCK + DAL+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD---DALNLFTEMDN 286
Query: 251 ---------------------------RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
R++ + +P+ + S+LI V++G LVE
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
E L ++++++ PD YS +++ LD A M+E M+
Sbjct: 347 AE-----------KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
PN Y++ GFCK R++E MEL R M RGL T+ +I G +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQM 454
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
VF+ M+ G P+ L+++ +++ LC+N + +A L P TY+++I+G
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G+V++ +L+ + K + P + + ++I CR G E+A+ LK MK P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 524 IYETMIASHEQKGNNARVLQLCNEMAS 550
Y T+I + + G+ +L EM S
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRS 601
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 162/373 (43%), Gaps = 16/373 (4%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ AKM E + ++ G L +++ ++ R ++SL V M++
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ VTL +++ C + V +D+++ + P ++LI G
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMV----EMGYKPDTFTFTTLI-----HGLF 199
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ + A V L+ +++Q+ PD V Y +V+ + G +D AL + ++M
Sbjct: 200 LHNK------ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
E + +Y + G CK +D+A+ L M+ +G++P T+ +I C GR +
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS-LISCLCNYGRWSDA 312
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ M+ P+ ++F +++ + + +A ++ + P TYS LI G
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ + E ++ M K P + ++++I+ C+ ++E+ + + M R L +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 522 VAIYETMIASHEQ 534
Y T+I Q
Sbjct: 433 TVTYTTLIHGFFQ 445
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V L +++ P V ++ ++ A ++ + + + E+M G + + Y+ F
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FC+ ++ A+ ++ M G +P T ++ G S R+ + + + + M+ G+ P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-YCHSKRISDAVALVDQMVEMGYKP 186
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
+F ++ L + +A A + +++ +G P TY ++ G +G++ L L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
+ME + + ++ ++I LC+ ++DA M ++ + PDV Y ++I+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 536 GNNARVLQLCNEM 548
G + +L ++M
Sbjct: 307 GRWSDASRLLSDM 319
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
+D A++++ +MV S P+ + K + + + L M+ G+ T+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY-S 122
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
+ I C +L L V M+ G+ P ++ ++ C ++ + A A + ++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ P T++ LI G + E + L +M + P L + +V+ LC+ G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LK M+ + DV IY T+I + + L L EM
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 130/317 (41%), Gaps = 60/317 (18%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGF----- 150
+ N V ++S I V+ G + +A L + + ++ DP SLI+ GF
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF--TYSSLIN--GFCMHDR 378
Query: 151 -----------VSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
+S P L++ + K + E ++ + RG + ++ +
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++H ++ V++ M+ +PN +T I++D LCK G L + + + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL---- 494
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVE----------------------------EEGKR 288
+RS+ P + +I M + G + + +G +
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 289 ERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV 348
E +LLK++ + +P+S Y+ ++ A++R G +++ E+ +EM GF ++
Sbjct: 555 EEAD----SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Query: 349 YTSFTGGFCKEGRIDEA 365
T +GR+D++
Sbjct: 611 IGLVT-NMLHDGRLDKS 626
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 203/447 (45%), Gaps = 31/447 (6%)
Query: 99 HGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAV------------RAVTDSLID 146
HG+ +Y+I I+ R I+ A ALL + +P V + ++D++
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 147 AVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVE---ARGFRVSLASFNSVLHVLQR 203
V +RP + L A + V+ RG + +L ++ V++ L +
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
L ++ M + + V +ID+LCK R+VD + E + P
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK----YRHVDDALNLFKEMETKGIRP 293
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ + SSLI + G + LL ++++ + P+ V ++ ++ A V+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDAS-----------QLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G A ++Y++M+ +P+ F Y S GFC R+D+A ++ M + P T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
++ +I G S R+E+ +F M G + +++ +++ L + D + A ++
Sbjct: 403 YNTLIKGFCK-SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
+ G P TYS+L+ G G++++ L+++ M+ + + ++T++I+ +C+ GK+
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 504 EDAEKYLKTMKSRLLTPDVAIYETMIA 530
+D ++ + + P+V Y TMI+
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 197/441 (44%), Gaps = 36/441 (8%)
Query: 144 LIDAVGFVSG--SHRPV-----LDLLVQTYAKMRLTEAAFDVCCNVEARGFRV----SLA 192
L DA+G G RP+ + L+ AKM+ FDV ++ + R+ L
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK----KFDVVISLGEKMQRLEIVHGLY 121
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
++N +++ R ++SL + M++ P+ VTL +++ C + V +D++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 253 --MGERKRSSHSPSAIVN----------SSLILRMVEKG-------HLVEEEGKRERVAV 293
MG R + + I +L+ RMV++G + V G +R
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 294 -MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+ + LL ++ + D V ++ I+ + + +D AL +++EM G PN Y+S
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
C GR +A +L+ M + + P TF + +I G+ E +++ M+
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTF-NALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
P +++ +V C + +++A ++ K P TY+ LIKG+ V++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
+L+ EM ++ + +T++IQ L G ++A+K K M S + PD+ Y ++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 533 EQKGNNARVLQLCNEMASLEL 553
G + L++ + M E+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEI 501
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 162/395 (41%), Gaps = 72/395 (18%)
Query: 84 ALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDS 143
AL+ F +T V +YS I L G +DA LL + K +P V ++
Sbjct: 279 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV--TFNA 335
Query: 144 LIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
LIDA FV K E +D ++ R + ++NS+++
Sbjct: 336 LIDA--FVK-------------EGKFVEAEKLYD---DMIKRSIDPDIFTYNSLVNGFCM 377
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
DR+ ++E M+ +P+ VT +I CK ++ + L R M R +
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE-LFREMSHRGLVGDT- 435
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ ++LI + G + + K+++ + PD + YS+++
Sbjct: 436 --VTYTTLIQGLFHDGDCDNAQ-----------KVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G L+ ALE+++ M S + + ++YT+ G CK G++D+ +L + +G+K
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK----- 537
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
P+ ++++ M+ LC R +++A A L ++
Sbjct: 538 -------------------------------PNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+ G LP TY+ LI+ + G+ +L EM
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 206/448 (45%), Gaps = 31/448 (6%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAV------------RAVTDSLI 145
+H + +Y+I I+ R I+ A ALL + +P V + ++D++
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 146 DAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVE---ARGFRVSLASFNSVLHVLQ 202
V +RP + L A + V+ RG + +L ++ V++ L
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
+ + L +++ M + + V +ID+LCK R+VD + E +
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK----YRHVDDALNLFKEMETKGIR 217
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P+ + SSLI + G + LL ++++ + P+ V ++ ++ A V
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDAS-----------QLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
+ G A +++++M+ +P+ F Y S GFC R+D+A ++ M + P +
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
T++ +I G S R+E+ +F M G + +++ +++ L + D + A +
Sbjct: 327 TYNTLIKGFCK-SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
++ G P TYS+L+ G G++++ L+++ M+ + + ++T++I+ +C+ GK
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIA 530
++D ++ + + P+V Y TMI+
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ AKM+ + + ++ G +L ++N +++ R ++SL + M++
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRI--MGERKRSSHSPSAIVNSSLIL------ 273
P+ VTL +++ C + V +D++ MG R P I ++LI
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR------PDTITFTTLIHGLFLHN 129
Query: 274 ----------RMVEKG-------HLVEEEGKRERVAV-MVVTLLKRLLQQNLVPDSVGYS 315
RMV++G + V G +R + + LL ++ + D V ++
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
I+ + + +D AL +++EM G PN Y+S C GR +A +L+ M +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
+ P TF + +I G+ E + + M+ P +++ ++ C + +++
Sbjct: 250 KINPNLVTF-NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A ++ K P TY+ LIKG+ V++ +L+ EM ++ + +T++IQ
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
L G ++A+K K M S + PD+ Y ++ G + L++ + M E+
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+++ +P ++ ++ A ++ D + + E+M G N + Y FC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
I A+ L+ M G +P T ++ G G R+ + + + + M+ G+ P ++F
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFT 119
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ L + +A A + R++ +G P TY +++ G +G++ L +ME
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
+ + +F ++I LC+ ++DA K M+++ + P+V Y ++I+ G +
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 542 LQLCNEM 548
QL ++M
Sbjct: 240 SQLLSDM 246
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 72/395 (18%)
Query: 84 ALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDS 143
AL+ F +T V +YS I L G +DA LL + K +P V ++
Sbjct: 204 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV--TFNA 260
Query: 144 LIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
LIDA FV K E D ++ R + ++NS+++
Sbjct: 261 LIDA--FVKE-------------GKFVEAEKLHD---DMIKRSIDPDIFTYNSLINGFCM 302
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
DR+ ++E M+ +P+ T +I CK ++ + L R M R +
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE-LFREMSHRGLVGDT- 360
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ ++LI + G + + K+++ + PD + YS+++
Sbjct: 361 --VTYTTLIQGLFHDGDCDNAQ-----------KVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G L+ ALE+++ M S + + ++YT+ G CK G++D+ +L + +G+K
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK----- 462
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
P+ ++++ M+ LC R +++A A L ++
Sbjct: 463 -------------------------------PNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+ G LP TY+ LI+ + G+ +L EM
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 194/396 (48%), Gaps = 23/396 (5%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ K++ + + +E G R L +FN V++ +VSL + M++
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMG-ERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ VT+ +++ C+ + V +D+++ K + +AI++S + V
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 281 LVEEEGKRERVAVMVVT-------------------LLKRLLQQNLVPDSVGYSLIVHAK 321
+E +R+ + VVT LL ++++ + P+ + YS ++ A
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
V+ G + A E++EEMV +P+ Y+S G C RIDEA ++ M +G
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 382 ETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
+++ +I G C A R+E+ + +F M G + + ++++ +++ + DV++A
Sbjct: 331 VSYNTLINGFCKAK--RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+++ G P TY++L+ G GE+++ L ++ +M+ + M + +T+VI+ +C+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
GK+E+A ++ + L PD+ Y TM++ KG
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 161/329 (48%), Gaps = 16/329 (4%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G++ + ++N+++ L ++ RV+ +D ++ + R PN VT +++ LC R
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS---SRW 241
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
DA R++ + + +P+ I S+L+ V+ G ++E + L + +++
Sbjct: 242 SDAA-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK-----------ELFEEMVRM 289
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
++ PD V YS +++ +D A +M++ MV G + Y + GFCK R+++
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
M+L R M RGL T++ +I G +G +++ F M G P +++ ++
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQG-FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
LC+N ++E+A + + TY+ +I+G G+V+E L+ + K + P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
+ +T+++ LC G L + E MK
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 168/376 (44%), Gaps = 25/376 (6%)
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM----IRGRNYPNAVTLKIMIDALC 237
V++R F S+ FN +L + + + +V + + M IR Y T I+I+ C
Sbjct: 77 VKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY----TFNIVINCFC 131
Query: 238 KEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT 297
V I+G+ + + P V G LV +R RV+ V+
Sbjct: 132 ----CCFQVSLALSILGKMLKLGYEPDR----------VTIGSLVNGFCRRNRVSD-AVS 176
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L+ ++++ PD V Y+ I+ + + ++ A + ++E+ G PN YT+ G C
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
R +A L+ M + + P T+ ++ +G++ E +FE M+ P
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITY-SALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+++ ++ LC + +++AN ++ KG L +Y+ LI G+ V++ +KL+ E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
M + + + ++IQ + G ++ A+++ M ++PD+ Y ++ G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 538 NARVLQLCNEMASLEL 553
+ L + +M E+
Sbjct: 416 LEKALVIFEDMQKREM 431
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 26/365 (7%)
Query: 122 ALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVL---DLLVQTYAKMRLTEAAFDV 178
+L+ +NR AV SL+D + V ++P + + ++ + K + AFD
Sbjct: 160 SLVNGFCRRNRVSDAV-----SLVDKM--VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK 238
+E +G R ++ ++ ++++ L S R S + MI+ + PN +T ++DA K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 239 EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTL 298
G V + E R S P + SSLI + + E +
Sbjct: 273 NG----KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN-----------QM 317
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
++ + + D V Y+ +++ + ++ ++++ EM G N+ Y + GF +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
G +D+A E M+ G+ P T+ ++++G +G LE+ L +FE M +
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTY-NILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ ++ +C+ VE+A + L KG P TY+ ++ G KG + EV LY +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 479 EYKSM 483
+ + +
Sbjct: 497 KQEGL 501
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 105/235 (44%), Gaps = 1/235 (0%)
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
++R L+ A++++ +MV S P+ + K + D + L + ME G++
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
TF +++I C ++ L + ML G+ P ++ +V C V A +
Sbjct: 118 NDLYTF-NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
+ ++++ G+ P Y+ +I V + + E+E K + P + +T+++ LC
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+ DA + L M + +TP+V Y ++ + + G +L EM + +
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 48/326 (14%)
Query: 95 HRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGS 154
+ V +YS + V+ G + +A+ L E + + DP V SLI+ +
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV--TYSSLINGLCL---- 307
Query: 155 HRPVLDLLVQTYAKMRLTEA--AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
H R+ EA FD+ + ++G + S+N++++ ++ RV
Sbjct: 308 HD-------------RIDEANQMFDL---MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
++ M + N VT +I + G +VD + SP + L+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAG----DVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
+ + G L E+ V+ + KR + ++V Y+ ++ + G ++ A
Sbjct: 408 GGLCDNGEL-------EKALVIFEDMQKREMDLDIVT----YTTVIRGMCKTGKVEEAWS 456
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
++ + + G +P+ YT+ G C +G + E L M+ GL C
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN---------DCT 507
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCL 418
G + + + ML G+ PS L
Sbjct: 508 LSDGDITLSAELIKKMLSCGYAPSLL 533
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 230/515 (44%), Gaps = 33/515 (6%)
Query: 34 VDDVAAAICDSFRRRR----SWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFH 89
V V + +C S+ R+ S V+ F + L V+ L + + AL FF+
Sbjct: 56 VKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFY 115
Query: 90 WSAKTHRFNHGVRSYSIAIHVLVRAGLITDA----RALLESLAAKNRDPGAVRAVTDSLI 145
W+ +F H +R Y + L+ G + A R +L + + R AV V D
Sbjct: 116 WAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQN 175
Query: 146 DAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD 205
+ S + VL++ V+ + L E A +V + RG +S+ ++ R
Sbjct: 176 QGLTPSSITMNCVLEIAVE----LGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 206 RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSA 265
++ MI+ P+ T +++ ALC+ GL+ R + +++ P+
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID----LGFKPNL 287
Query: 266 IVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG 325
I +SLI + +KG + + +L+ +++ P+ ++ ++ + G
Sbjct: 288 INFTSLIDGLCKKGSIKQ-----------AFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 326 SLDSALEMYEEMVMSG-FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
+ A ++ ++V S ++PN YTS GG+CKE +++ A L M+ +GL P T+
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 385 DHVIIG-CAAGS-GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
+I G C AGS GR E + + M GF+P+ +++ ++ LC+ +A L +
Sbjct: 397 TTLINGHCKAGSFGRAYELMNL---MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
G TY++LI+ + ++ + L + M + + +I CR K
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
++++E+ + + S L P Y +MI+ + ++G+
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 162/359 (45%), Gaps = 15/359 (4%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF+ +L +F S++ L + + +++ E M+R PN T +ID LCK G ++
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK- 340
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
A + + ++ P+ +S+I G+ E++ R + L R+ +Q
Sbjct: 341 --AFRLFLKLVRSDTYKPNVHTYTSMI-----GGYCKEDKLNRAEM------LFSRMKEQ 387
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
L P+ Y+ +++ + GS A E+ M GF PN + Y + CK+ R EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
EL+ GL+ G T+ ++I + + L F M GF + ++
Sbjct: 448 YELLNKAFSCGLEADGVTYT-ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C + ++++ ++ G +P + TY+ +I Y +G++ LK ++ M+ P
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
+ S+I LC+ +++A K + M R L+P T+ + ++ ++A + L
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 15/294 (5%)
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAK 321
+PS+I + ++ VE G + E + ++V + +VPDS Y L+V
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSV-----------RGVVPDSSSYKLMVIGC 227
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
R G + A M+ GF P++ T C+ G ++ A+ R M G KP
Sbjct: 228 FRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
Query: 382 ETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
F +I G C GS +++ + E M+ G+ P+ + +++ LC+ E+A
Sbjct: 288 INFTSLIDGLCKKGS--IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 441 TRLL-DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+L+ + P TY+ +I GY + ++ L+ M+ + + P ++ +T++I C+
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
G A + + M P++ Y I S +K +L N+ S L
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
F + GR++EA+ ++ M+ +GL P T + ++ A G +E VF+ M G +P
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMN-CVLEIAVELGLIEYAENVFDEMSVRGVVP 215
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
S+ MV + +++A+ LT ++ +GF+P T +L++ G V + +
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
+M P L FTS+I LC+ G ++ A + L+ M P+V + +I ++
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 536 GNNARVLQL 544
G + +L
Sbjct: 336 GWTEKAFRL 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
G + +A E+MR M L+ + E GRL E +G+ M G PS ++
Sbjct: 141 GNLQKAHEVMRCM----LRNFSEI------------GRLNEAVGMVMDMQNQGLTPSSIT 184
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
+ ++E E +E A + +G +P ++Y L++ G G++QE + M
Sbjct: 185 MNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI 244
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA 539
+ P + T ++ LC G + A Y + M P++ + ++I +KG+
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIK 304
Query: 540 RVLQLCNEM 548
+ ++ EM
Sbjct: 305 QAFEMLEEM 313
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 162/360 (45%), Gaps = 16/360 (4%)
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
SFN V+ L + V +V+ M + P+ T ++D LCKE + V LD +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
E SPS ++ + LI + +KG L V L+ + + VP+ V
Sbjct: 249 QSE----GCSPSPVIYNVLIDGLCKKGDLTR-----------VTKLVDNMFLKGCVPNEV 293
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ ++H G LD A+ + E MV S PN Y + G K+ R +A+ L+ M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
E RG + V+I G+ EE + ++ M G P+ + + +V+ LC
Sbjct: 354 EERGYH-LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+A L R++ G LP TYS L+KG+ G +E ++++ EM+ ++
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
+I LC G++++A M + + PD Y ++I G+ L+L +EM E
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 225/547 (41%), Gaps = 55/547 (10%)
Query: 26 PRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQ-----VLLELKDPND 80
P+ + D +++ +S+ +D+V + + L + ++ + V +
Sbjct: 68 PKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHL 127
Query: 81 AKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAV 140
A+ FH R V+S++ ++V++ GL + + N +
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN----- 182
Query: 141 TDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV 200
I G +L+++ K+R + A +V + R ++ +++
Sbjct: 183 ----ISPNGLS-------FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 201 LQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSS 260
L + +R+ + + M P+ V ++ID LCK+G L R +D +
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF----LKG 287
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEEGKRERVA--------VMVVTLLKRLLQQNLVPDSV 312
P+ + ++LI + KG L + ER+ V TL+ L++Q D+V
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 313 G----------------YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
YS+++ + G + A+ ++ +M G +PN VY+ G
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
C+EG+ +EA E++ M G P T+ ++ G +G EE + V++ M G +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG-FFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
+ +++ LC V++A +++L G P YS +IKG G + LKLY+
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 477 EM----EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
EM E KS P + + ++ LC + A L +M R PDV T + +
Sbjct: 527 EMLCQEEPKSQ-PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 533 EQKGNNA 539
+K N+
Sbjct: 586 SEKSNSC 592
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 199/480 (41%), Gaps = 78/480 (16%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
+++P +A + F + K F G + S I +G LL + +NR
Sbjct: 51 VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR-- 108
Query: 135 GAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNV--EARGFRVSLA 192
+I F+ ++ + Y K L + A D+ + E R R S+
Sbjct: 109 ---------VIIERSFI---------VVFRAYGKAHLPDKAVDLFHRMVDEFRCKR-SVK 149
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRN----YPNAVTLKIMIDALCKEGLLQRNVDA 248
SFNSVL+V+ + Y++++ PN ++ ++I ALCK
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK---------- 199
Query: 249 LDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLV 308
LR V++ + + + + ++ +
Sbjct: 200 ------------------------LRFVDRA----------------IEVFRGMPERKCL 219
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD Y ++ + +D A+ + +EM G P+ +Y G CK+G + +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+ M +G P T++ +I G G+L++ + + E M+ + IP+ +++ ++ L
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCL-KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+ R A L+ + ++G+ + YS+LI G +G+ +E + L+ +M K P +
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
V++ ++ LCR GK +A++ L M + P+ Y +++ + G +Q+ EM
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 149/385 (38%), Gaps = 79/385 (20%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y+ IH L G + A +LLE + + P V T L
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT--------------------L 333
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ K R A + ++E RG+ ++ ++ ++ L + + ++ M
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
PN V +++D LC+EG + L+R++ S P+A SSL+ + G L
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIA----SGCLPNAYTYSSLMKGFFKTG-LC 448
Query: 283 EEEGK----------------------------RERVAVMVVTLLKRLLQQNLVPDSVGY 314
EE + R + A+MV + ++L + PD+V Y
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS---KMLTIGIKPDTVAY 505
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMS---GFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
S I+ +GS+D+AL++Y EM+ +P+ Y G C + I A++L+
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 372 MEGRGLKP-------YGETFDHVIIGCAAGSGRLEECL-------------GVFEAMLGA 411
M RG P + T C G LEE + + E MLG
Sbjct: 566 MLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGK 625
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQA 436
P ++ +V ++C+ + + A
Sbjct: 626 YLAPKTSTWAMIVREICKPKKINAA 650
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P+ LSF+ +++ LC+ R V++A + ++ LP TY L+ G + + E + L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 475 YYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
EM+ + P ++ +I LC+ G L K + M + P+ Y T+I
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 535 KGNNARVLQLCNEMAS 550
KG + + L M S
Sbjct: 305 KGKLDKAVSLLERMVS 320
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 202/470 (42%), Gaps = 36/470 (7%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
+ + AL F +K SYSI IH L G + +A L + + K P + R
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP-STRT 303
Query: 140 VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLH 199
T +L++ L + AF++ + RG + ++ ++ ++
Sbjct: 304 YT-------------------VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
Query: 200 VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L R ++ V M++ R +P+ +T +I+ CK+G R V A + + KR+
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG---RVVPAFELLTVMEKRA 401
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
P+ + L+ + G V LLKR+L L PD V Y++++
Sbjct: 402 C-KPNVRTFNELMEGLCRVGK-----------PYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
R G +++A ++ M EP+ +T+ FCK+G+ D A + M +G+
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS- 508
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
E +I G+ + L + E ++ + + S + +++ L + V++ A
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L ++ G +P TY+ L+ G G++ ++ M+ P + +T +I LC+
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
G++E+AEK L M+ ++P+ Y M+ + G R L+ M
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 213/504 (42%), Gaps = 53/504 (10%)
Query: 35 DDVAAAICDSFRRRRSWDAVSRKFGSL--ELNDSLVEQVLLELKDPNDAKTALSFFHWSA 92
D+VAA S + +W+ S SL +N ++ QV+ + ND + FF W
Sbjct: 38 DEVAAHDVASLLKTPNWEKNS-SLKSLVSHMNPNVASQVISLQRSDND--ICVRFFMWVC 94
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS 152
K + + + ++V +GL A A++ +L + S
Sbjct: 95 KHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKE--------------------CS 134
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
+ +L L+ + ++R E GFR++ ++S+L L + D L +
Sbjct: 135 RCEKEMLKLM-YCFDELR------------EVFGFRLNYPCYSSLLMSLAKLDLGFLAYV 181
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
Y M + + +++ALCK G +A + M + + + + +SL+
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGY----TEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
L G R A+ V ++ + + P+SV YS+++H +G L+ A
Sbjct: 238 LGFC--------RGLNLRDALKVFDVMSK--EVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
+ ++M G +P++ YT C G ID+A L M RG KP T+ +I G
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDG-L 346
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
G++EE GV M+ PS ++++ ++ C++ V A LT + + P
Sbjct: 347 CRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKT 512
T++ L++G G+ + + L M + P + + +I LCR G + A K L +
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 513 MKSRLLTPDVAIYETMIASHEQKG 536
M + PD + +I + ++G
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQG 490
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 172/406 (42%), Gaps = 61/406 (15%)
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
+F ++++ + + + M+R + VT +ID +CK G + + L+ +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEE----GKRERVAVM--VVT--------- 297
+ + R +P ++ ++IL M+ KG V+EE GK ++ ++ VVT
Sbjct: 538 V--KMRILTTPHSL---NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 298 ----------LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
+L+ + +P+ Y++I++ + G ++ A ++ M SG PN
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE-------- 399
YT G+ G++D A+E +R M RG + + ++ G ++
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVS 712
Query: 400 ---------ECLG----VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
EC+ V E + G I F +V +LC+ +++N + +L++
Sbjct: 713 DIALRETDPECINELISVVEQL--GGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLER 768
Query: 447 G-FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
G FL E ++++ Y +K + + ++L + P F VIQ L + G E
Sbjct: 769 GVFL--EKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 506 AEKY---LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A + L T + V Y + ++ G+ + V+ L +++
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
+ M GF+ + + +V LC+N E A ++++L GF+ + L+ G+
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSV-FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+++ LK++ M + C SV ++ +I LC G+LE+A M + P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y +I + +G + L +EM
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEM 327
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 174/400 (43%), Gaps = 27/400 (6%)
Query: 156 RPVLDLLVQTYA-------KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVS 208
RP L QTY+ K R ++ + +E G + ++ +F + VL R+ +++
Sbjct: 220 RPSL----QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 209 LVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
+++ + M P+ VT ++IDALC R +D + + K H P +
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCT----ARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 269 SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
+L+ R + L V + + VPD V ++++V A + G+
Sbjct: 332 ITLLDRFSDNRDLDS-----------VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
A + + M G PN Y + G + R+D+A+EL ME G+KP T+ V
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY-IVF 439
Query: 389 IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
I SG L FE M G P+ ++ + + L + +A L D G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 449 LPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK 508
+P TY++++K Y+ GE+ E +KL EM P + V S+I L + ++++A K
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 509 YLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
MK L P V Y T++A + G ++L M
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 187/454 (41%), Gaps = 42/454 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++I I VL RAG I +A +L+ + + P V LIDA+ LD
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV--LIDALCTARK-----LD 310
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+ + KM+ D RV+ + + D V W M +
Sbjct: 311 CAKEVFEKMKTGRHKPD----------RVTYITLLDRFSDNRDLDSVKQFW---SEMEKD 357
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI---LRMVE 277
+ P+ VT I++DALCK G D LD + + P+ ++LI LR+
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVM----RDQGILPNLHTYNTLICGLLRVHR 413
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
+E G E + V P + Y + + + G SALE +E+M
Sbjct: 414 LDDALELFGNMESLGVK--------------PTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
G PN + K GR EA ++ G++ GL P T+ ++++ C + G
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY-NMMMKCYSKVGE 518
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
++E + + M+ G P + + ++ L + V++A R+ + P TY+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
L+ G G++QE ++L+ M K P F ++ CLC+ ++ A K L M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
PDV Y T+I + G + ++M L
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 166/384 (43%), Gaps = 21/384 (5%)
Query: 111 LVRAGLITDARALLESL---AAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYA 167
LV G+ D ++L + + K+ + R + + +G P +LL+
Sbjct: 739 LVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV--QPKLPTYNLLIGGLL 796
Query: 168 KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV 227
+ + E A DV V++ G +A++N +L +S ++ ++++Y+ M N +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
T I+I L K G + +D +M +R SP+A LI + + G L E +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDR---DFSPTACTYGPLIDGLSKSGRLYEAK-- 911
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
L + +L P+ Y+++++ + G D+A +++ MV G P+
Sbjct: 912 ---------QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
Y+ C GR+DE + + ++ GL P ++ +I G S RLEE L +F
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK-SHRLEEALVLFNE 1021
Query: 408 MLGA-GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKG 466
M + G P +++ ++ L VE+A + G P T++ LI+GY+ G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 467 EVQEVLKLYYEMEYKSMCPGLSVF 490
+ + +Y M P +
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 308 VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAME 367
+PD Y+ ++ A + G +D E+Y+EM E N+ + G K G +D+A++
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 368 LMRG-MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L M R P T+ +I G + SGRL E +FE ML G P+C ++ ++
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSK-SGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
+ + + A A R++ +G P TYS+L+ G V E L + E++ + P
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMK-SRLLTPDVAIYETMI 529
+ + +I L + +LE+A MK SR +TPD+ Y ++I
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
L+++ + V ++ Y+ ++H ++ A+E+Y M++ GF P+ Y+S G K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
ID M L++ ME GLKP TF + I +G++ E + + M G P +
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTF-TICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 294
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ +++ LC R ++ A ++ P TY L+ ++ ++ V + + EM
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
E P + FT ++ LC+ G +A L M+ + + P++ Y T+I +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 539 ARVLQLCNEMASL 551
L+L M SL
Sbjct: 415 DDALELFGNMESL 427
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/485 (20%), Positives = 200/485 (41%), Gaps = 52/485 (10%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS 152
K + V +Y+ + L + G I +A L E + K P + ++L D +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI--TFNTLFDCL---- 618
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
+ L ++ KM D+ C + + ++N+++ L ++ +V
Sbjct: 619 -CKNDEVTLALKMLFKM------MDMGCVPD-------VFTYNTIIFGLVKNGQVKEAM- 663
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
+ H ++ YP+ VTL ++ + K L++ DA I + P+ + LI
Sbjct: 664 CFFHQMKKLVYPDFVTLCTLLPGVVKASLIE---DAYKIITNFLYNCADQPANLFWEDLI 720
Query: 273 LRMVEKGHLVEEEGKRERVAV---------MVVTLLKRLLQQNLV--------------- 308
++ + + ER+ ++V +++ + N V
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 309 --PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
P Y+L++ + ++ A +++ ++ +G P+ Y + K G+IDE
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF-EAMLGAGFIPSCLSFDKMVE 425
EL + M + T + VI G +G +++ L ++ + M F P+ ++ +++
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVK-AGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
L ++ + +A +LD G P Y++LI G+ GE L+ M + + P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
L ++ ++ CLC G++++ Y K +K L PDV Y +I + L L
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 546 NEMAS 550
NEM +
Sbjct: 1020 NEMKT 1024
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L++ GK ++ + L K + +++ +++++ V+ G++D AL++Y +++
Sbjct: 826 LLDAYGKSGKIDELF-ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 341 -GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
F P + Y G K GR+ EA +L GM G +P + +++I +G +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY-NILINGFGKAGEAD 943
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+F+ M+ G P ++ +V+ LC V++ L + G P Y+L+I
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 460 KGYAAKGEVQEVLKLYYEMEY-KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
G ++E L L+ EM+ + + P L + S+I L G +E+A K ++ L
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 519 TPDVAIYETMIASHEQKG 536
P+V + +I + G
Sbjct: 1064 EPNVFTFNALIRGYSLSG 1081
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 179/469 (38%), Gaps = 56/469 (11%)
Query: 117 ITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAF 176
I A L SLA RD A + + L D +G V S +++++ Y+K+ + A
Sbjct: 468 IVACNASLYSLAKAGRDREA-KQIFYGLKD-IGLVPDS--VTYNMMMKCYSKVGEIDEAI 523
Query: 177 DVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDAL 236
+ + G + NS+++ L ++DRV W ++ M + P VT ++ L
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 237 CKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
K G +Q ++ + ++ + P+ I ++L + + + + +
Sbjct: 584 GKNGKIQEAIELFEGMV----QKGCPPNTITFNTLFDCLCKNDEVT-----------LAL 628
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM------------------- 337
+L +++ VPD Y+ I+ V+ G + A+ + +M
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 338 ----------VMSGF------EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
+++ F +P + + G E ID A+ + G+ G
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAML-GAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
++ II + + +FE G P +++ ++ L E +E A
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
++ G +P TY+ L+ Y G++ E+ +LY EM VI L +
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 501 GKLEDA-EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G ++DA + Y M R +P Y +I + G QL M
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 192/489 (39%), Gaps = 73/489 (14%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
+ +Y+ I L+R + DA L ++ + P A + ID G SG L
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV--FIDYYG-KSGDSVSAL- 453
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+T+ KM+ +G ++ + N+ L+ L ++ R ++ +
Sbjct: 454 ---ETFEKMK-------------TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P++VT +M+ K G +D +++ E + P IV +SLI + K
Sbjct: 498 GLVPDSVTYNMMMKCYSKVG----EIDEAIKLLSEMMENGCEPDVIVVNSLI-NTLYKAD 552
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
V+E K + R+ + L P V Y+ ++ + G + A+E++E MV
Sbjct: 553 RVDEAWK----------MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G PN+ + + CK + A++++ M G P T++ +I G +G+++E
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK-NGQVKE 661
Query: 401 CLGVFEAM-------------LGAGFI----------------------PSCLSFDKMVE 425
+ F M L G + P+ L ++ ++
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG 721
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC- 484
+ ++ A + RL+ G + + I Y+ K + +E K +
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 485 -PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
P L + +I L +E A+ +KS PDVA Y ++ ++ + G + +
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 544 LCNEMASLE 552
L EM++ E
Sbjct: 842 LYKEMSTHE 850
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 35/295 (11%)
Query: 94 THRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG 153
TH +++I I LV+AG + DA L L + +RD LID + S
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFSPTACTYGPLIDGL---SK 903
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
S R Y +L E D C R + A +N +++ ++ +
Sbjct: 904 SGR--------LYEAKQLFEGMLDYGC-------RPNCAIYNILINGFGKAGEADAACAL 948
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
++ M++ P+ T +++D LC G VD E K S +P +V +LI+
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVG----RVDEGLHYFKELKESGLNPD-VVCYNLII 1003
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY-SLIVHAKVRLGSLDSALE 332
+ K H +EE A+++ +K + + PD Y SLI++ + G ++ A +
Sbjct: 1004 NGLGKSHRLEE-------ALVLFNEMKT--SRGITPDLYTYNSLILNLGIA-GMVEEAGK 1053
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
+Y E+ +G EPN F + + G+ G+ + A + + M G P T++ +
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
+G+++E + M+ R +K T+ I + G L++ M GF+ +
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTY-LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 189
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
S++ ++ L ++R +A R++ +GF P TYS L+ G + ++ V+ L EM
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
E + P + FT I+ L R GK+ +A + LK M PDV Y +I
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 24/363 (6%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
S+ +N ++ L + R++ +++ M+ R P+ +T +ID CK G +++
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK-- 270
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
+ ER ++ H +++ + +L+ + K +VE+ +LK + VP
Sbjct: 271 ---VRERMKADHIEPSLITFNTLLKGLFKAGMVED----------AENVLKEMKDLGFVP 317
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D+ +S++ ++AL +YE V SG + N++ + CKEG+I++A E++
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 370 RGMEGRGLKPYGETFDHVIIG-CAAGS---GRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
+GL P ++ +I G C G R++ EAM G P L+++ ++
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK-----IEAMEKQGMKPDHLAYNCLIR 432
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
+ CE ++E A + ++ KG P TY++LI GY K E + + EME P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
+ + ++I CLC+ KL +A+ + M+ R ++P V IY +I KG +
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 546 NEM 548
EM
Sbjct: 553 KEM 555
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 208/477 (43%), Gaps = 51/477 (10%)
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
+D L F+ K R V Y++ I L + + DA L + + A+ P +
Sbjct: 193 SDVGKGLELFN-RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI- 250
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
++LID Y K E +F V ++A SL +FN++L
Sbjct: 251 -TYNTLIDG------------------YCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE-------GLLQRNVDALDR 251
L ++ V +V + M P+A T I+ D G+ + VD+
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS--- 348
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
K ++++ S ++N+ + +EGK E+ +L R + + LVP+
Sbjct: 349 ---GVKMNAYTCSILLNA------------LCKEGKIEKAE----EILGREMAKGLVPNE 389
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
V Y+ ++ R G L A E M G +P+ Y FC+ G ++ A + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
M+ +G+ P ET+ +++IG ++C + + M G +P+ +S+ ++ LC+
Sbjct: 450 MKLKGVSPSVETY-NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
+ +A + D+G P Y++LI G +KG++++ + EM K + L +
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
++I L GKL +AE L + + L PDV Y ++I+ + GN R + L EM
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 192/443 (43%), Gaps = 21/443 (4%)
Query: 108 IHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGS--HRPVLDLLVQT 165
+ VL++ I AR +L SL + P A L A S S H LL
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTP---FASPKELFSAFSLSSPSLKHDFSYLLLSVL 118
Query: 166 YAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPN 225
+ ++ A D+ + G S S +L L ++ + + +V+ +++ P+
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 226 AVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEE 285
I A K + + ++ +R+ +R PS + + LI + +
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDR----IYPSVFIYNVLIDGLCK-------- 226
Query: 286 GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
GKR A L +L + L+P + Y+ ++ + G+ + + ++ E M EP+
Sbjct: 227 GKRMNDAEQ---LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
+ + G K G +++A +++ M+ G P TF + G ++ + E LGV+
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE-KAEAALGVY 342
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
E + +G + + ++ LC+ +E+A L R + KG +P E Y+ +I GY K
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
G++ ME + M P + +I+ C G++E+AEK + MK + ++P V Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 526 ETMIASHEQKGNNARVLQLCNEM 548
+I + +K + + EM
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEM 485
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 194/463 (41%), Gaps = 43/463 (9%)
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV---GFVSGSHRPV--- 158
SI ++ L + G I A +L AK P V + +++ID G + G+ +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEV--IYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 159 -----------LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
+ L++ + ++ E A ++ +G S+ ++N ++ R
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCK-EGLLQRNVDALDRIMGERKRSSHSPSAI 266
+D+ + M PN V+ +I+ LCK LL+ + + R M +R SP
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI--VKRDMEDR---GVSPKVR 530
Query: 267 VNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
+ + LI KG + E +LK+ ++ NLV Y+ ++ G
Sbjct: 531 IYNMLIDGCCSKGKI-------EDAFRFSKEMLKKGIELNLVT----YNTLIDGLSMTGK 579
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
L A ++ E+ G +P+ F Y S G+ G + + L M+ G+KP +T+ H
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY-H 638
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGA-GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
++I G + + E + G P L ++ ++ + D+E+A ++++
Sbjct: 639 LLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
K +TTY+ LI G G++ EV L EM + M P + +++ C
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A + + M+ + DV I +++ +++ + + +EM
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGS--LDSALEMYEEMVMSGFE-PNSFVYTSFTGG 355
L+ LLQQN + + G ++ + +R S S E++ +S + F Y +
Sbjct: 62 LRVLLQQNRIETARG---VLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVL 118
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETF----DHVIIGCAAGSGRLEECLGVFEAMLGA 411
+ I EA +L + G+ P ++ DH++ + + + VF +L +
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLV-----KTKQFRVTINVFLNILES 173
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
F PS + K ++ + DV + R+ P Y++LI G + +
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+L+ EM + + P L + ++I C+ G E + K + MK+ + P + + T++
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 532 HEQKGNNARVLQLCNEMASL 551
+ G + EM L
Sbjct: 294 LFKAGMVEDAENVLKEMKDL 313
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 235/544 (43%), Gaps = 64/544 (11%)
Query: 46 RRRRSWD-AVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSY 104
R +RSW+ A+S + S L VE++L+ D D K L FF++ F+H S+
Sbjct: 50 RGKRSWEIALSSELVSRRLKTVHVEEILIGTID--DPKLGLRFFNFLGLHRGFDHSTASF 107
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ 164
I IH LV+A L A +LL++L + P V V S + S S DLL+Q
Sbjct: 108 CILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS---SFDLLIQ 164
Query: 165 TYAKMRLTEAAFDVCCNVEARGFRVSLA----SFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
Y + R D + +VSL + +++LH L + L +++ M+
Sbjct: 165 HYVRSR---RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ +I +LC+ + + R+ + + + + +V
Sbjct: 222 GIRPDVYIYTGVIRSLCE--------------LKDLSRAKEMIAHMEATGCDVNIVPYNV 267
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L++ K+++V V + K L ++L PD V Y +V+ ++ + LEM +EM+
Sbjct: 268 LIDGLCKKQKVW-EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
F P+ +S G K G+I+EA+ L++ + G+ P ++ +I G + E
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR-KFHE 385
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+F+ M G P+ +++ +++ C ++ A + L ++D G Y+ LI
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 461 GYA-----------------------------------AKGEVQEVLKLYYEMEYKSMCP 485
G+ +KG++ + L+LY+EM K + P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
+ FT+++ L R G + DA K M + P+ Y MI + ++G+ ++ +
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 546 NEMA 549
EM
Sbjct: 566 KEMT 569
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 202/478 (42%), Gaps = 42/478 (8%)
Query: 72 LLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
L ELKD + AK ++ H A N + Y++ I L + + +A + + LA K+
Sbjct: 237 LCELKDLSRAKEMIA--HMEATGCDVN--IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 132 RDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSL 191
P V T LV K++ E ++ + F S
Sbjct: 293 LKPDVVTYCT--------------------LVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 192 ASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDR 251
A+ +S++ L++ ++ ++ + ++ PN +ID+LCK DR
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
MG + P+ + S LI +G L ++ L ++ L
Sbjct: 393 -MG---KIGLRPNDVTYSILIDMFCRRGKLD-----------TALSFLGEMVDTGLKLSV 437
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
Y+ +++ + G + +A EM+ EP YTS GG+C +G+I++A+ L
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
M G+G+ P TF ++ G +G + + + +F M P+ ++++ M+E CE
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFR-AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV-F 490
D+ +A L + +KG +P +Y LI G G+ E K++ + +K C + +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICY 615
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
T ++ CR GKLE+A + M R + D+ Y +I + + L EM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 208/488 (42%), Gaps = 46/488 (9%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLE--SLAA------KNRDPGAVRAVTDSLIDAV 148
H VRS + VLV +IT L E +L+A K R G + + ++ +V
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV-SV 221
Query: 149 GFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD 205
G RP + ++++ +++ A ++ ++EA G V++ +N ++ L +
Sbjct: 222 GI-----RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 206 RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSA 265
+V + + + P+ VT ++ LCK + ++ +D ++ R SPS
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR----FSPSE 332
Query: 266 IVNSSLILRMVEKGHLVEEEGKRERVAVMVVT------------------------LLKR 301
SSL+ + ++G + E +RV V+ L R
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+ + L P+ V YS+++ R G LD+AL EMV +G + + + Y S G CK G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
I A M M + L+P T+ ++G G++ + L ++ M G G PS +F
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTS-LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ L + A + + P TY+++I+GY +G++ + + EM K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
+ P + +I LC G+ +A+ ++ + + Y ++ ++G
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 542 LQLCNEMA 549
L +C EM
Sbjct: 632 LSVCQEMV 639
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 178/426 (41%), Gaps = 46/426 (10%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
+ +++ + L RAGLI DA L +A N P +R +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP--------------------NRVTYN 546
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
++++ Y + AF+ + +G S+ ++H L + + S + + +G
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
N + ++ C+EG L+ + + V + L +V G
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEM--------------VQRGVDLDLVCYGV 652
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L++ K + + LLK + + L PD V Y+ ++ AK + G A +++ M+
Sbjct: 653 LIDGSLKHKDRK-LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGC-----AAGS 395
G PN YT+ G CK G ++EA L M+ P + V GC G
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ-----PVSSVPNQVTYGCFLDILTKGE 766
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
+++ + + A+L G + + +++ ++ C +E+A+ +TR++ G P TY
Sbjct: 767 VDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
+ +I + +V++ ++L+ M K + P + ++I C G++ A + M
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Query: 516 RLLTPD 521
+ L P+
Sbjct: 886 QGLIPN 891
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 203/504 (40%), Gaps = 82/504 (16%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT--DSLID----------AVGF 150
+YSI I + R G + A + L + D G +V +SLI+ A GF
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMV----DTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 151 VSGSHRPVLDLLVQTYAKMR-------LTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
++ L+ V TY + A + + +G S+ +F ++L L R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
+ + ++ M PN VT +MI+ C+EG + + + L + +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM---------TE 570
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
IV + R + G + + +V V L + N + + Y+ ++H R
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFV------DGLHKGNCELNEICYTGLLHGFCR 624
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G L+ AL + +EMV G + + Y G K L++ M RGLKP
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP---- 680
Query: 384 FDHVI----IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
D VI I + +G +E G+++ M+ G +P+ +++ ++ LC+ V +A
Sbjct: 681 -DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 440 LTRL---------------LD--------------------KGFLPGETTYSLLIKGYAA 464
+++ LD KG L TY++LI+G+
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR 799
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
+G ++E +L M + P +T++I LCR ++ A + +M + + PD
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 525 YETMIASHEQKGNNARVLQLCNEM 548
Y T+I G + +L NEM
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEM 883
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L++ + RV V+ + + +L+P+ S ++H V+ A+E++ +MV
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG----LKPYGETFDHVIIGCAAGSG 396
G P+ ++YT C+ + A E++ ME G + PY +V+I
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPY-----NVLIDGLCKKQ 276
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
++ E +G+ + + G P +++ +V LC+ ++ E + +L F P E S
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
L++G +G+++E L L + + P L V+ ++I LC+ K +AE M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
L P+ Y +I ++G L EM L
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
RG + + S++ ++ + +++ MI PN VT +I+ LCK G
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF--- 732
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM---------- 294
V+ + + + + S P+ V L ++ KG + ++ A++
Sbjct: 733 -VNEAEVLCSKMQPVSSVPNQ-VTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 295 ---------------VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
L+ R++ + PD + Y+ +++ R + A+E++ M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G P+ Y + G C G + +A EL M +GL P +T
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 167/351 (47%), Gaps = 16/351 (4%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF L +F S+L+ +R+ +++ ++ PN VT +I LCK L
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V+ +++ R P+ + ++L+ + E G + LL+ ++++
Sbjct: 208 VELFNQMGTNGSR----PNVVTYNALVTGLCEIGRWGD-----------AAWLLRDMMKR 252
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ P+ + ++ ++ A V++G L A E+Y M+ P+ F Y S G C G +DEA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
++ ME G P + +I G S R+E+ + +F M G + + +++ +++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHG-FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C + A ++ + P TY++L+ G G+V++ L ++ M + M
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ +T +IQ +C+ GK+EDA ++ S+ + P+V Y TMI+ ++G
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 173/368 (47%), Gaps = 22/368 (5%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ Y E A + + GF+ ++ ++ +++ L ++ ++ +++ M
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDA--LDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
+ PN VT ++ LC+ G R DA L R M +R+ P+ I ++LI V+ G
Sbjct: 219 SRPNVVTYNALVTGLCEIG---RWGDAAWLLRDMMKRRIE---PNVITFTALIDAFVKVG 272
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
L+E +E VM+ Q ++ PD Y +++ G LD A +M+ M
Sbjct: 273 KLMEA---KELYNVMI--------QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRL 398
+G PN +YT+ GFCK R+++ M++ M +G+ T+ +I G C G R
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG--RP 379
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ VF M P +++ +++ LC N VE+A + + TY+++
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I+G G+V++ L+ + K M P + +T++I CR G + +A+ K MK
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 519 TPDVAIYE 526
P+ ++Y+
Sbjct: 500 LPNESVYK 507
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 16/364 (4%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
S+ F +L V+ + +R +V ++E M P T I++ +C R L
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
++M + P + +SL+ + + + L ++L P
Sbjct: 142 GKMM----KLGFEPDLVTFTSLLNGYCHWNRIED-----------AIALFDQILGMGFKP 186
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+ V Y+ ++ + L+ A+E++ +M +G PN Y + G C+ GR +A L+
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
R M R ++P TF +I G+L E ++ M+ P ++ ++ LC
Sbjct: 247 RDMMKRRIEPNVITFT-ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+++A + G P E Y+ LI G+ V++ +K++YEM K +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
+T +IQ C G+ + A++ M SR PD+ Y ++ G + L + M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 550 SLEL 553
E+
Sbjct: 426 KREM 429
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 1/232 (0%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L R++ +P + ++ ++ ++ D + ++E+M + G P C
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ A + M G +P TF ++ G R+E+ + +F+ +LG GF P+
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG-YCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+++ ++ LC+NR + A ++ G P TY+ L+ G G + L +
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
M + + P + FT++I + GKL +A++ M + PDV Y ++I
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/546 (22%), Positives = 233/546 (42%), Gaps = 82/546 (15%)
Query: 62 ELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDAR 121
EL VE+++ EL + + ++ FF + F H S + HVL + +
Sbjct: 46 ELRHVHVEEIMDELMSES-SDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQ 104
Query: 122 ALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCN 181
+LE L ++ G R ++ G V D+L+ +++R+ + + +
Sbjct: 105 VILEQLL---QEEGTFRK-----WESTGLV-------WDMLLFLSSRLRMVDDSLYILKK 149
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY------------------ 223
++ + VS S+NSVL+ + +D++ WDVY+ I+ +N
Sbjct: 150 MKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKE-IKDKNEHTYSTVVDGLCRQQKLED 205
Query: 224 --------------PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS 269
P+ V+ ++ CK G VD + PS ++
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF----VDMAKSFFCTVLKCGLVPSVYSHN 261
Query: 270 SLILRMVEKGHLVE-----EEGKRERVAVMVVT-------------------LLKRLLQQ 305
LI + G + E + + V VT +++ +L +
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS-FTGGFCKEGRIDE 364
L PD + Y++++ + +LG++D L + ++M+ GFE NS + S G CK GRIDE
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
A+ L M+ GL P + VI G G+ + L +++ M +P+ + ++
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCK-LGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
LC+ + +A + L L+ G Y+++I GYA G ++E L+L+ + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
P ++ F S+I C+ + +A K L +K L P V Y T++ ++ GN + +L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 545 CNEMAS 550
EM +
Sbjct: 561 RREMKA 566
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 227/535 (42%), Gaps = 72/535 (13%)
Query: 44 SFRRRRS----WDAVSRKFGSLEL-NDSLVEQVLLELKDPNDAKTALSF----FH----- 89
+FR+ S WD + L + +DSL +L ++KD N + S+ +H
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSL--YILKKMKDQNLNVSTQSYNSVLYHFRETD 173
Query: 90 --WSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
W + +YS + L R + DA L + K+ P V +S++
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF--NSIMSG 231
Query: 148 ---VGFVSGSHR---PVL-----------DLLVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
+GFV + VL ++L+ + A ++ ++ G
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
++N + +S W+V M+ P+ +T I++ C+ G N+D
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG----NIDMGL 347
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
++ + ++I+ S++L + K ++E ++L ++ L PD
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE----------ALSLFNQMKADGLSPD 397
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
V YS+++H +LG D AL +Y+EM PNS + + G C++G + EA L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 371 GMEGRGLKPYGETFD----HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L GET D +++I A SG +EE L +F+ ++ G PS +F+ ++
Sbjct: 458 S-----LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C+ +++ +A L + G P +Y+ L+ YA G + + +L EM+ + + P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 487 LSVFTSVIQCLCRCGK------------LEDAEKYLKTMKSRLLTPDVAIYETMI 529
++ + + LCR K E ++ L+ M+S + PD Y T+I
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/491 (19%), Positives = 190/491 (38%), Gaps = 77/491 (15%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA-VTDSLIDAVGFVSGSHRPVL 159
V S++I I+ L G I +A L + +P +V + +G +SG+ +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 160 DLL-------VQTYA-------KMRLTEAAFDVCCNVEARGFRV-SLASFNSVLHVLQRS 204
D+L V TY ++ + + ++ +RGF + S+ + +L L ++
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 205 DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS 264
R+ ++ M P+ V I+I LCK G + D + +R P+
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL----PN 432
Query: 265 AIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
+ + +L+L + +KG L+E +LL L+ D V Y++++ +
Sbjct: 433 SRTHGALLLGLCQKGMLLEAR-----------SLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM------------------ 366
G ++ ALE+++ ++ +G P+ + S G+CK I EA
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 367 -----------------ELMRGMEGRGLKPYGETFDHVIIGCAAGSGR-----------L 398
EL R M+ G+ P T+ + G G
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E+C M G P ++++ +++ LC + + A L + + TY++L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G +++ Y ++ +++ +T++I+ C G E A K + R
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 519 TPDVAIYETMI 529
+ Y +I
Sbjct: 722 NVSIRDYSAVI 732
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 164/402 (40%), Gaps = 42/402 (10%)
Query: 52 DAVSRKFGSLELNDSLVEQVLLE-LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHV 110
D +SR F ELN + V+L L ALS F+ K + + +YSI IH
Sbjct: 352 DMLSRGF---ELNSIIPCSVMLSGLCKTGRIDEALSLFN-QMKADGLSPDLVAYSIVIHG 407
Query: 111 LVRAGLITDARALLESLAAK-----NRDPGAV-------------RAVTDSLIDAVGFVS 152
L + G A L + + K +R GA+ R++ DSLI S
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS-----S 462
Query: 153 GSHRPVL--DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLV 210
G ++ ++++ YAK E A ++ V G S+A+FNS+++ ++ ++
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 211 WDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSS 270
+ + + P+ V+ ++DA G N ++D + E K P+ V S
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCG----NTKSIDELRREMKAEGIPPTN-VTYS 577
Query: 271 LILRMVEKGHLVEEEGK--RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
+I + + +G E RER+ L+ + + + PD + Y+ I+ R+ L
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG--LKPYGETFDH 386
A E M + +S Y C G I +A + ++ + L + T
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT--- 694
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+I G E + +F +L GF S + ++ +LC
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 197/466 (42%), Gaps = 75/466 (16%)
Query: 70 QVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
+VL ++ + +S FH + H + SY+I I+ L R A +++ +
Sbjct: 74 KVLSKIAKSKNYDLVISLFH-HMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 130 KNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRV 189
+P V SLI+ GF G+ V D A D+ +E GFR
Sbjct: 133 FGYEPDVV--TVSSLIN--GFCQGNR--VFD--------------AIDLVSKMEEMGFR- 171
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
P+ V +ID CK GL+ V+
Sbjct: 172 ----------------------------------PDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
DR+ +R A+ +SL+ + G + L++ ++ +++VP
Sbjct: 198 DRM----ERDGVRADAVTYNSLVAGLCCSGRWSD-----------AARLMRDMVMRDIVP 242
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+ + ++ ++ V+ G A+++YEEM +P+ F Y S G C GR+DEA +++
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M +G P T++ +I G S R++E +F M G + ++++ +++ +
Sbjct: 303 DLMVTKGCLPDVVTYNTLING-FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ A +R+ + P TYS+L+ G V++ L L+ M+ + ++
Sbjct: 362 AGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
+ VI +C+ G +EDA +++ + L PDV Y TMI+ +K
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 150/370 (40%), Gaps = 52/370 (14%)
Query: 167 AKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNA 226
+ M L E C +++R S+ F+ VL + +S LV ++ HM +
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLP-SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 227 VTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEG 286
+ I+I+ LC+ R V AL ++G+ + + P + SSLI + + +
Sbjct: 105 YSYNIVINCLCR---CSRFVIALS-VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD--- 157
Query: 287 KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS 346
+ L+ ++ + PD V Y+ I+ ++G ++ A+E+++ M G ++
Sbjct: 158 --------AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 347 FVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
Y S G C GR +A LMR M R + P TF VI G+ E + ++E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI-DVFVKEGKFSEAMKLYE 268
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKG 466
M + C + DV TY+ LI G G
Sbjct: 269 EM----------------TRRCVDPDV-------------------FTYNSLINGLCMHG 293
Query: 467 EVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYE 526
V E ++ M K P + + ++I C+ ++++ K + M R L D Y
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 527 TMIASHEQKG 536
T+I + Q G
Sbjct: 354 TIIQGYFQAG 363
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 99/228 (43%), Gaps = 9/228 (3%)
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME----GRGLKPYG 381
+L+ ++++ +M+ S P+ ++ K D + L ME G L Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY- 107
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
+++I C R L V M+ G+ P ++ ++ C+ V A ++
Sbjct: 108 ----NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
++ + GF P Y+ +I G G V + ++L+ ME + + S++ LC G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
+ DA + ++ M R + P+V + +I ++G + ++L EM
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 119/292 (40%), Gaps = 36/292 (12%)
Query: 112 VRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQT---YAK 168
VRA +T +L+ L R A R + D ++ + + V+D+ V+
Sbjct: 205 VRADAVT-YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 169 MRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVT 228
M+L E C + + + ++NS+++ L RV + + M+ P+ VT
Sbjct: 264 MKLYEEMTRRCVDPD-------VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 229 LKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG------HLV 282
+I+ CK + VD ++ E + I +++I + G +
Sbjct: 317 YNTLINGFCK----SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 283 EEEGKRERVAVMVV---------------TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
R + + L + + + + D Y++++H ++G++
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ A +++ + G +P+ YT+ GFC++ + D++ L R M+ GL P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/546 (22%), Positives = 233/546 (42%), Gaps = 82/546 (15%)
Query: 62 ELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDAR 121
EL VE+++ EL + + ++ FF + F H S + HVL + +
Sbjct: 46 ELRHVHVEEIMDELMSES-SDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQ 104
Query: 122 ALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCN 181
+LE L ++ G R ++ G V D+L+ +++R+ + + +
Sbjct: 105 VILEQLL---QEEGTFRK-----WESTGLV-------WDMLLFLSSRLRMVDDSLYILKK 149
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY------------------ 223
++ + VS S+NSVL+ + +D++ WDVY+ I+ +N
Sbjct: 150 MKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKE-IKDKNEHTYSTVVDGLCRQQKLED 205
Query: 224 --------------PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS 269
P+ V+ ++ CK G VD + PS ++
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF----VDMAKSFFCTVLKCGLVPSVYSHN 261
Query: 270 SLILRMVEKGHLVE-----EEGKRERVAVMVVT-------------------LLKRLLQQ 305
LI + G + E + + V VT +++ +L +
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS-FTGGFCKEGRIDE 364
L PD + Y++++ + +LG++D L + ++M+ GFE NS + S G CK GRIDE
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
A+ L M+ GL P + VI G G+ + L +++ M +P+ + ++
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCK-LGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
LC+ + +A + L L+ G Y+++I GYA G ++E L+L+ + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
P ++ F S+I C+ + +A K L +K L P V Y T++ ++ GN + +L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 545 CNEMAS 550
EM +
Sbjct: 561 RREMKA 566
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 227/535 (42%), Gaps = 72/535 (13%)
Query: 44 SFRRRRS----WDAVSRKFGSLEL-NDSLVEQVLLELKDPNDAKTALSF----FH----- 89
+FR+ S WD + L + +DSL +L ++KD N + S+ +H
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSLY--ILKKMKDQNLNVSTQSYNSVLYHFRETD 173
Query: 90 --WSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
W + +YS + L R + DA L + K+ P V +S++
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF--NSIMSG 231
Query: 148 ---VGFVSGSHR-----------PVL---DLLVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
+GFV + P + ++L+ + A ++ ++ G
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
++N + +S W+V M+ P+ +T I++ C+ G N+D
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG----NIDMGL 347
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
++ + ++I+ S++L + K ++E ++L ++ L PD
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE----------ALSLFNQMKADGLSPD 397
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
V YS+++H +LG D AL +Y+EM PNS + + G C++G + EA L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 371 GMEGRGLKPYGETFD----HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L GET D +++I A SG +EE L +F+ ++ G PS +F+ ++
Sbjct: 458 S-----LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C+ +++ +A L + G P +Y+ L+ YA G + + +L EM+ + + P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 487 LSVFTSVIQCLCRCGK------------LEDAEKYLKTMKSRLLTPDVAIYETMI 529
++ + + LCR K E ++ L+ M+S + PD Y T+I
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/491 (19%), Positives = 190/491 (38%), Gaps = 77/491 (15%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA-VTDSLIDAVGFVSGSHRPVL 159
V S++I I+ L G I +A L + +P +V + +G +SG+ +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 160 DLL-------VQTYA-------KMRLTEAAFDVCCNVEARGFRV-SLASFNSVLHVLQRS 204
D+L V TY ++ + + ++ +RGF + S+ + +L L ++
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 205 DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS 264
R+ ++ M P+ V I+I LCK G + D + +R P+
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL----PN 432
Query: 265 AIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
+ + +L+L + +KG L+E +LL L+ D V Y++++ +
Sbjct: 433 SRTHGALLLGLCQKGMLLEAR-----------SLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM------------------ 366
G ++ ALE+++ ++ +G P+ + S G+CK I EA
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 367 -----------------ELMRGMEGRGLKPYGETFDHVIIGCAAGSGR-----------L 398
EL R M+ G+ P T+ + G G
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E+C M G P ++++ +++ LC + + A L + + TY++L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G +++ Y ++ +++ +T++I+ C G E A K + R
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 519 TPDVAIYETMI 529
+ Y +I
Sbjct: 722 NVSIRDYSAVI 732
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 164/402 (40%), Gaps = 42/402 (10%)
Query: 52 DAVSRKFGSLELNDSLVEQVLLE-LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHV 110
D +SR F ELN + V+L L ALS F+ K + + +YSI IH
Sbjct: 352 DMLSRGF---ELNSIIPCSVMLSGLCKTGRIDEALSLFN-QMKADGLSPDLVAYSIVIHG 407
Query: 111 LVRAGLITDARALLESLAAK-----NRDPGAV-------------RAVTDSLIDAVGFVS 152
L + G A L + + K +R GA+ R++ DSLI S
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS-----S 462
Query: 153 GSHRPVL--DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLV 210
G ++ ++++ YAK E A ++ V G S+A+FNS+++ ++ ++
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 211 WDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSS 270
+ + + P+ V+ ++DA G N ++D + E K P+ V S
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCG----NTKSIDELRREMKAEGIPPTN-VTYS 577
Query: 271 LILRMVEKGHLVEEEGK--RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
+I + + +G E RER+ L+ + + + PD + Y+ I+ R+ L
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG--LKPYGETFDH 386
A E M + +S Y C G I +A + ++ + L + T
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT--- 694
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+I G E + +F +L GF S + ++ +LC
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 50/478 (10%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
+H + +YSI I+ R ++ A A+L + P V +SL++ GF G+
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIV--TLNSLLN--GFCHGN--- 159
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
R++EA V VE G++ +F +++H L + ++ S + E M
Sbjct: 160 ------------RISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P+ VT +I+ LCK G ++ L+++ ++ ++ +++I + +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM----EKGKIEADVVIYNTIIDGLCK 262
Query: 278 KGHL---------VEEEGKRERVAVM---------------VVTLLKRLLQQNLVPDSVG 313
H+ +E +G + V LL +L++N+ PD V
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGF-EPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
++ ++ A V+ G L A ++Y+EMV S P+ Y + GFCK R++E ME+ R M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
RGL T+ +I G + VF+ M+ G P ++++ +++ LC N +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
VE A + + TY+ +I+ G+V++ L+ + K + P + +T+
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
++ CR G E+A+ MK P+ Y T+I + + G+ A +L EM S
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ L +++ P V +S ++ A ++ D + + E+M G N + Y+ F
Sbjct: 60 IGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY 119
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FC+ ++ A+ ++ M G P T + ++ G G+ R+ E + + + M+ G+ P
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN-RISEAVALVDQMVEMGYQP 178
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++F +V L ++ +A A + R++ KG P TY +I G +GE L L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+ME + + ++ ++I LC+ ++DA M+++ + PDV Y +I+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 145/318 (45%), Gaps = 19/318 (5%)
Query: 237 CKEGLLQR-----NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
C+E L ++ +D + G+ +S PS IV S +L + K + +
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFD-------- 92
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
+V++L +++ + + YS+ ++ R L AL + +M+ G+ P+ S
Sbjct: 93 --LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
GFC RI EA+ L+ M G +P TF ++ G + E + + E M+
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ-HNKASEAVALVERMVVK 209
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT-YSLLIKGYAAKGEVQE 470
G P +++ ++ LC+ + + A NL ++KG + + Y+ +I G + +
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLA-LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
L+ +ME K + P + + +I CLC G+ DA + L M + + PD+ + +I
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 531 SHEQKGNNARVLQLCNEM 548
+ ++G +L +EM
Sbjct: 329 AFVKEGKLVEAEKLYDEM 346
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 120/302 (39%), Gaps = 35/302 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV------------ 148
V +Y+ I L G +DA LL + KN +P V ++LIDA
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV--FFNALIDAFVKEGKLVEAEKL 342
Query: 149 --GFVSGSH----RPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
V H + L++ + K + E +V + RG + ++ +++H
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
++ V++ M+ +P+ +T I++D LC G NV+ + ++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG----NVETALVVFEYMQKRDMK 458
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
+ +++I + + G + E+G L L + + P+ V Y+ ++
Sbjct: 459 LDIVTYTTMIEALCKAGKV--EDG---------WDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
R G + A ++ EM G PNS Y + ++G + EL++ M G
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 383 TF 384
TF
Sbjct: 568 TF 569
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 51/389 (13%)
Query: 184 ARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQ 243
A G + L++FN +L VL + V + + +I+ PN T + I LC+ G L
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL- 267
Query: 244 RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
D R++G P I ++LI + + E E L +++
Sbjct: 268 ---DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE-----------VYLGKMV 313
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ L PDS Y+ ++ + G + A + + V +GF P+ F Y S G C EG +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A+ L G+G+KP ++ +I G + G + E + M G IP +F+ +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKG-LSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK------------------ 465
V LC+ V A+ + ++ KG+ P T+++LI GY+ +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 466 -----------------GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK 508
+ ++V++ Y M K P L F +++ LCR KL++A
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 509 YLKTMKSRLLTPDVAIYETMIASHEQKGN 537
L+ MK++ + PD + T+I + G+
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 210/516 (40%), Gaps = 68/516 (13%)
Query: 67 LVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLES 126
L + V +K D AL F+ K F H + +Y R+++E
Sbjct: 6 LPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTY----------------RSVIEK 49
Query: 127 LAAKNRDPGAVRAVTDSLIDAVGFVSGSH--RPVLDLLVQTYAKMRLTEAAFDVCCNVEA 184
L G A+ + L+D V G+H V ++ Y + + A +V ++
Sbjct: 50 LGYY----GKFEAMEEVLVDMRENV-GNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF 104
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE----- 239
++ S+N+++ VL S VY M P+ + I + + CK
Sbjct: 105 YDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA 164
Query: 240 -------------------------GLLQRNVDALD-RIMGERKRSSHSPSAIVNSSLIL 273
G + N A + G+ S S + L+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 224
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ +KG + E E LL +++++ ++P+ Y+L + + G LD A+ M
Sbjct: 225 VLCKKGDVKECE-----------KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CA 392
++ G +P+ Y + G CK + EA + M GL+P T++ +I G C
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
G +L E + V +A+ GF+P ++ +++ LC + +A A L KG P
Sbjct: 334 GGMVQLAERI-VGDAVFN-GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKT 512
Y+ LIKG + +G + E +L EM K + P + F ++ LC+ G + DA+ +K
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 513 MKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
M S+ PD+ + +I + + L++ + M
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 159/347 (45%), Gaps = 19/347 (5%)
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
++N+++ + V L + + P+ T + +ID LC EG R + +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
+G+ + P+ I+ ++LI + +G ++E L + ++ L+P+
Sbjct: 383 LGKGIK----PNVILYNTLIKGLSNQGMILE-----------AAQLANEMSEKGLIPEVQ 427
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
++++V+ ++G + A + + M+ G+ P+ F + G+ + +++ A+E++ M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G+ P T++ ++ G S + E+ + ++ M+ G P+ +F+ ++E LC R
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTS-KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME--YKSMCPGLSVF 490
+++A L + +K P T+ LI G+ G++ L+ +ME YK + +
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK-VSSSTPTY 605
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+I + AEK + M R L PD Y M+ + GN
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 37/320 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V++++I ++ L + G ++DA L++ + +K P D F +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP-----------DIFTF---------N 465
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ Y+ E A ++ + G + ++NS+L+ L ++ + V + Y+ M+
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN T I++++LC+ R +D ++ E K S +P A+ +LI + G
Sbjct: 526 GCAPNLFTFNILLESLCR----YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV-GYSLIVHAKVRLGSLDSALEMYEEMVM 339
L +G TL +++ + V S Y++I+HA ++ A ++++EMV
Sbjct: 582 L---DG--------AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
P+ + Y GFCK G ++ + + M G P T V I C R+
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV-INCLCVEDRVY 689
Query: 400 ECLGVFEAMLGAGFIPSCLS 419
E G+ M+ G +P ++
Sbjct: 690 EAAGIIHRMVQKGLVPEAVN 709
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 163/402 (40%), Gaps = 56/402 (13%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDAL---CKEGLL 242
GF+ +L+++ SV+ L + + +V M N N + + + A+ ++G +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM--RENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
Q V+ +R+ P+ ++++ +V+ G+ + + R+
Sbjct: 93 QEAVNVFERM----DFYDCEPTVFSYNAIMSVLVDSGYFDQAH-----------KVYMRM 137
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF------ 356
+ + PD +++ + + + +AL + M G E N Y + GGF
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 357 -----------------------------CKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
CK+G + E +L+ + RG+ P T++
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 388 IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
I G G L+ + + ++ G P ++++ ++ LC+N ++A L +++++G
Sbjct: 258 IQGLCQ-RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
P TY+ LI GY G VQ ++ + + P + S+I LC G+ A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 508 KYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
+ + P+V +Y T+I +G QL NEM+
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 208/473 (43%), Gaps = 26/473 (5%)
Query: 81 AKTALSFFHWSAKTH-RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
A+ A F S+++ ++ ++S+S IHVL A T AR L++SL + +
Sbjct: 54 AEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSN 113
Query: 140 VTDSLIDAVGFVSGSHRP--VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFN-- 195
++ L +A+ + V LL+ + +M L E A V +R + S S
Sbjct: 114 MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWV-----SREMKCSPDSKACL 168
Query: 196 SVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGE 255
S+L+ L R R VW Y+ MI P+ ++ K+GL + ++++ E
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK----EKLLDE 224
Query: 256 RKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYS 315
P+ + + IL + + E E E L+K+ ++P+ YS
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFE--------LMKK---HGVLPNLYTYS 273
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
++ + G++ A +Y+E++++ PN V+ + GFCK + A L M
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G+ P ++ +I G SG + E +G+ M P ++ ++ LC V +
Sbjct: 334 GVDPNLYVYNCLIHG-HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
AN ++ ++ P TY+ LI GY + +++ L L EM + P + F+++I
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
C ++ A M + + PDV Y +I +H ++ N L+L ++M
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 207/470 (44%), Gaps = 37/470 (7%)
Query: 74 ELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRD 133
E+K D+K LS + + RF+ S + +++ GL+ D +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFD----SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 134 PGAVRAVTDSLIDAVGFVSGSHRP--------VLDLLVQTYAKMRLTEAAFDVCCNVEAR 185
+ + + L+D + S +P +LDL KM E F++ ++
Sbjct: 213 --GLYSKKEKLLDEM--TSLGIKPNVYIYTIYILDLCRDN--KMEEAEKMFEL---MKKH 263
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G +L ++++++ ++ V + +Y+ ++ PN V ++D CK R
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK----ARE 319
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+ + + P+ V + LI + G+++E G LL +
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG-----------LLSEMESL 368
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
NL PD Y+++++ + A ++++M P+S Y S G+CKE +++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
++L M G++P TF +I G ++ +G++ M G +P +++ +++
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDG-YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
+ ++++A + +L+ G P + T++ L+ G+ +G + + Y E + C
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
FT +I+ LC+ G + A ++ M+S +TPD+ Y +M+ H Q+
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQE 597
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
++ + LVPD Y ++ + G ++ +EM G +PN ++YT + C++ +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
++EA ++ M+ G+ P T+ +I G +G + + G+++ +L A +P+ + F
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDG-YCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+V+ C+ R++ A + ++ G P Y+ LI G+ G + E + L EME
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
++ P + +T +I LC ++ +A + + MK+ + P A Y ++I + ++ N +
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 542 LQLCNEMAS 550
L LC+EM +
Sbjct: 429 LDLCSEMTA 437
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 5/244 (2%)
Query: 311 SVG-YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
S+G +SL++ + +G + AL + EM S P+S S G + R D
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
+ M RGL P + V+ C G + + + M G P+ + + LC
Sbjct: 188 QLMISRGLVPDVHIY-FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ +E+A + G LP TYS +I GY G V++ LY E+ + P + V
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
F +++ C+ +L A M + P++ +Y +I H + GN + L +EM
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 550 SLEL 553
SL L
Sbjct: 367 SLNL 370
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 16/351 (4%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G S+ +F S+L+ R DRV +++ M+ PN V +ID LCK +
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+D L+R+ ++ P + +SLI + G + MV + KR
Sbjct: 206 LDLLNRM----EKDGIGPDVVTYNSLISGLCSSGRWSD-------ATRMVSCMTKR---- 250
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ PD ++ ++ A V+ G + A E YEEM+ +P+ Y+ G C R+DEA
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
E+ M +G P T+ +I G S ++E + +F M G + + +++ +++
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILING-YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C + A R++ G P TY++L+ G G++++ L + +M+ M
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ + +I+ +C+ G++ DA ++ + L PD+ Y TM+ +KG
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 16/359 (4%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
S+A F+ +L + + + +V ++E M N T I+++ C+ L + L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
G+ + H PS + SL L +G V + + + +++ P
Sbjct: 140 ----GKMIKLGHEPSIVTFGSL-LNGFCRGDRVYD----------ALYMFDQMVGMGYKP 184
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+ V Y+ I+ + +D+AL++ M G P+ Y S G C GR +A ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M R + P TF+ +I C GR+ E +E M+ P +++ ++ LC
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVK-EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+++A ++ KG P TYS+LI GY +V+ +KL+ EM + +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+T +IQ CR GKL AE+ + M + P++ Y ++ G + L + +M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 163/378 (43%), Gaps = 16/378 (4%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ +KM+ + + ++ G +L + N +L+ R ++SL MI+
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ P+ VT +++ C+ + + D+++G + P+ ++ +++I + + +
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG----MGYKPNVVIYNTIIDGLCKSKQV 202
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ LL R+ + + PD V Y+ ++ G A M M
Sbjct: 203 DN-----------ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
P+ F + + KEGR+ EA E M R L P T+ +I G S RL+E
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS-RLDEA 310
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+F M+ G P +++ ++ C+++ VE + +G + TY++LI+G
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
Y G++ +++ M + + P + + ++ LC GK+E A L M+ + D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 522 VAIYETMIASHEQKGNNA 539
+ Y +I + G A
Sbjct: 431 IVTYNIIIRGMCKAGEVA 448
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 31/402 (7%)
Query: 99 HGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR------------AVTDSLID 146
H + + +I ++ R ++ A + L + +P V V D+L
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 147 AVGFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
V ++P + + ++ K + + A D+ +E G + ++NS++ L
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
S R S + M + YP+ T +IDA KEG V + E R S P
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG----RVSEAEEFYEEMIRRSLDP 289
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ S LI + L E E E MV + PD V YS++++ +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAE---EMFGFMV--------SKGCFPDVVTYSILINGYCK 338
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
++ ++++ EM G N+ YT G+C+ G+++ A E+ R M G+ P T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
++ ++ G +G++E+ L + M G ++++ ++ +C+ +V A L
Sbjct: 399 YNVLLHG-LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
+G +P TY+ ++ G KG +E L+ +M+ + P
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L ++Q +P +S ++ A ++ D + ++E+M M G N FC
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ ++ A+ + M G +P TF ++ G G R+ + L +F+ M+G G+ P+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD-RVYDALYMFDQMVGMGYKPNV 186
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+ ++ +++ LC+++ V+ A L R+ G P TY+ LI G + G + ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
M + + P + F ++I + G++ +AE++ + M R L PD+ Y +I
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 2/256 (0%)
Query: 295 VVTLLKRLLQQNLVPDSV-GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
VV L +Q +P ++ +++++ R L AL +M+ G EP+ + S
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
GFC+ R+ +A+ + M G G KP ++ +I G S +++ L + M G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG-LCKSKQVDNALDLLNRMEKDGI 217
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P ++++ ++ LC + A ++ + + P T++ LI +G V E +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
Y EM +S+ P + ++ +I LC +L++AE+ M S+ PDV Y +I +
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 534 QKGNNARVLQLCNEMA 549
+ ++L EM+
Sbjct: 338 KSKKVEHGMKLFCEMS 353
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 196/451 (43%), Gaps = 34/451 (7%)
Query: 85 LSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA---RALLESLAAKNRDPGAVRAVT 141
L FH S ++ + + + +VR G D L++ P AVR +
Sbjct: 93 LKIFHRSCRSGNYIESLH----LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM- 147
Query: 142 DSLIDAVGFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
+++ G +P + L+ + KM + A V + ++ F ++N ++
Sbjct: 148 -EILEKFG------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L ++ L V ++ P +T I+I+A EG VD ++M E
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG----GVDEALKLMDEMLS 256
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
P +++I M + EG +R MV + L + PD + Y++++
Sbjct: 257 RGLKPDMFTYNTIIRGMCK-------EGMVDRAFEMV----RNLELKGCEPDVISYNILL 305
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
A + G + ++ +M +PN Y+ C++G+I+EAM L++ M+ +GL
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
P ++D +I GRL+ + E M+ G +P ++++ ++ LC+N +QA
Sbjct: 366 PDAYSYDP-LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
+L + G P ++Y+ + + G+ L + EM + P + S+I CLC
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
R G +++A + L M+S P V Y ++
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 51/321 (15%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ +I+ CK +D R++ + SP + + +I + +G L
Sbjct: 156 PDVFAYNALINGFCK----MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD- 210
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ + +L +LL N P + Y++++ A + G +D AL++ +EM+ G +
Sbjct: 211 ----------LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
P+ F Y + G CKEG +D A E++R +E +G +P
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP------------------------ 296
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+S++ ++ L E+ +T++ + P TYS+LI
Sbjct: 297 ------------DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G+++E + L M+ K + P + +I CR G+L+ A ++L+TM S PD+
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 524 IYETMIASHEQKGNNARVLQL 544
Y T++A+ + G + L++
Sbjct: 405 NYNTVLATLCKNGKADQALEI 425
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 138/279 (49%), Gaps = 13/279 (4%)
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
R ++P I+ + LI KG + AV V+ +L++ Q PD Y+ +
Sbjct: 117 RKGYNPDVILCTKLI-----KGFFTLRNIPK---AVRVMEILEKFGQ----PDVFAYNAL 164
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
++ ++ +D A + + M F P++ Y G C G++D A++++ +
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
+P T+ ++I G ++E L + + ML G P +++ ++ +C+ V++A
Sbjct: 225 QPTVITYT-ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
+ L KG P +Y++L++ +G+ +E KL +M + P + ++ +I L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 498 CRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
CR GK+E+A LK MK + LTPD Y+ +IA+ ++G
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 182/392 (46%), Gaps = 30/392 (7%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF FN +L + S + W + + + + + I+I C+ G ++++
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH------LVEEEGKRERVA------V 293
D ++ E SP+ ++ ++LI +KG L E GK VA V
Sbjct: 183 FD----LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 294 MVVTLLK------------RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
++ L K ++ + + P+ Y+ +++ + G A ++++EM G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
N Y + GG C+E +++EA +++ M+ G+ P T++ +I G G G+L +
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG-FCGVGKLGKA 357
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L + + G PS ++++ +V C D A + + ++G P + TY++LI
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+A +++ ++L ME + P + ++ +I C G++ +A + K+M + P+
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
IY TMI + ++G++ R L+L EM EL
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 178/392 (45%), Gaps = 16/392 (4%)
Query: 133 DPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLA 192
+ G + D LI+ F + + L+ K E A D+ + G +
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
++ +++ L ++ +++YE M +PN T +++ LCK+G R DA ++
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG---RTKDAF-QV 290
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
E + S + + ++LI G L E E A VV +K + P+ +
Sbjct: 291 FDEMRERGVSCNIVTYNTLI------GGLCREMKLNE--ANKVVDQMK---SDGINPNLI 339
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ ++ +G L AL + ++ G P+ Y GFC++G A ++++ M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
E RG+KP T+ ++I A S +E+ + + +M G +P ++ ++ C
Sbjct: 400 EERGIKPSKVTYT-ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+ +A+ +++K P E Y+ +I GY +G LKL EME K + P ++ +
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
+I+ LC+ K ++AE+ ++ M + P +I
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 172 TEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
T+ AF V + RG ++ ++N+++ L R +++ V + M PN +T
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
+ID C G L + + +L R + R SPS + + L+ KG + G
Sbjct: 344 LIDGFCGVGKLGKAL-SLCRDLKSR---GLSPSLVTYNILVSGFCRKG---DTSG----- 391
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
++K + ++ + P V Y++++ R +++ A+++ M G P+ Y+
Sbjct: 392 ---AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLG 410
GFC +G+++EA L + M + +P ++ +I+G C GS L + + M
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY--RALKLLKEMEE 506
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
P+ S+ M+E LC+ R ++A + +++D G P + SL+
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 194/470 (41%), Gaps = 72/470 (15%)
Query: 84 ALSFFHWSAKTHR-FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTD 142
AL F ++ K+H F H +Y + L RA +L+ L +N P ++ +
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL--RNSYP-PIKCGEN 121
Query: 143 SLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
ID L++ Y E++ + + G + S+ S N++L+VL
Sbjct: 122 LFID---------------LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI 166
Query: 203 RSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSH 261
++ R LV ++++ PN T +++ ALCK+ ++ LD I
Sbjct: 167 QNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI--------- 217
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAK 321
PS LVP+ V Y+ I+
Sbjct: 218 -PS----------------------------------------MGLVPNLVTYTTILGGY 236
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
V G ++SA + EEM+ G+ P++ YT G+CK GR EA +M ME ++P
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
T+ V+I + E +F+ ML F+P K+++ LCE+ V++A
Sbjct: 297 VTYG-VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
++L +P S LI +G V E KL+ E E S+ P L + ++I +C G
Sbjct: 356 KMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKG 414
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
+L +A + M R P+ Y +I + GN +++ EM +
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
V+ L +V ++ M++ P+ L +I LCKEG V ++ E
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG----RVTEARKLFDEF 392
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
++ S PS + ++LI M EKG L E G+ L + ++ P++ Y++
Sbjct: 393 EKGS-IPSLLTYNTLIAGMCEKGELTEA-GR----------LWDDMYERKCKPNAFTYNV 440
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL--MRGMEG 374
++ + G++ + + EEM+ G PN + G K G+ ++AM++ M M G
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Query: 375 RGLKPYGETF 384
+ K E F
Sbjct: 501 KVDKESWELF 510
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 217/512 (42%), Gaps = 84/512 (16%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
+H + +Y+I I+ L R ++ A A+L + P V +SL++ GF G+
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIV--TLNSLLN--GFCHGN--- 149
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
R++EA V VE G++ +F +++H L + ++ S + E M
Sbjct: 150 ------------RISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P+ VT +I+ LCK G ++ L+++ ++ ++ S++I + +
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM----EKGKIEADVVIYSTVIDSLCK 252
Query: 278 KGHL-------VEEEGKRERVAVMVVT-----------------LLKRLLQQNLVPDSVG 313
H+ E + K R V + LL +L++ + P+ V
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA-------- 365
++ ++ A + G L A ++++EM+ +PN Y S GFC R+DEA
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 366 ---------------------------MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
MEL R M RGL T+ +I G S
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD-C 431
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ VF+ M+ G P+ ++++ +++ LC+N +E+A L P TY+++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+G G+V++ L+ + K + P + + ++I C+ G E+A MK
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
PD Y T+I +H + G+ A +L EM S
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V L +++ P V +S ++ A ++ D + E+M + G N + Y
Sbjct: 50 VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
C+ ++ A+ ++ M G P T + ++ G G+ R+ E + + + M+ G+ P
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN-RISEAVALVDQMVEMGYQP 168
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++F +V L ++ +A A + R++ KG P TY +I G +GE L L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
+ME + + ++++VI LC+ ++DA M ++ + PDV Y ++I+
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 536 GNNARVLQLCNEM 548
G + +L ++M
Sbjct: 289 GRWSDASRLLSDM 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
LD A++++ EMV S P+ ++ K + D + ME G+ T++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN- 104
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
++I C +L L + M+ G+ PS ++ + ++ C + +A A + ++++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ P T++ L+ G + E + L M K P L + +VI LC+ G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
L M+ + DV IY T+I S + + L L EM
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 26/355 (7%)
Query: 182 VEARGFRVSLASFNSVL-----HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDAL 236
V+ RG RVS+ N+++ H + S+ W +I P+ T I+I+ L
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW-----IIANDCKPDVATYNILINRL 355
Query: 237 CKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
CKEG + V LD E + P+ + + LI + + +
Sbjct: 356 CKEGKKEVAVGFLD----EASKKGLIPNNLSYAPLIQAYC-----------KSKEYDIAS 400
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
LL ++ ++ PD V Y +++H V G +D A+ M +++ G P++ +Y G
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
CK GR A L M R + P + +I G SG +E VF + G
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR-SGDFDEARKVFSLSVEKGVKVD 519
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
+ + M++ C + +++A A + R+ ++ +P + TYS +I GY + ++ +K++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
ME P + +TS+I C G + AE+ K M+ R L P+V Y T+I S
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 197/480 (41%), Gaps = 23/480 (4%)
Query: 68 VEQVLLELKDPNDAKT--ALS-FFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALL 124
+E VL L++ N T ALS H A++ + V Y + + + +LL
Sbjct: 118 IEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLL 177
Query: 125 ESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEA 184
SL K+R G R V D + D V +L V+ E +
Sbjct: 178 -SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL---VKGMCNEGKVEVGRKLIEGRWG 233
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
+G ++ +N+++ + + + V++ + P T MI+ CKEG
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG---- 289
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+ A DR++ E K S +++I G+ V+ E + ++ K
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA---ESIGWIIANDCK---- 342
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
PD Y+++++ + G + A+ +E G PN+ Y +CK D
Sbjct: 343 ----PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
A +L+ M RG KP T+ +I G SG +++ + + ++ G P ++ ++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVV-SGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
LC+ A + +LD+ LP Y+ LI G+ G+ E K++ K +
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
+ ++I+ CR G L++A + M L PD Y T+I + ++ + A +++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 179/412 (43%), Gaps = 52/412 (12%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
++ A+ R+ DV N+ +++ + + VLH S +S ++Y++++
Sbjct: 105 FLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELY 164
Query: 222 N-YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
+ P+ + ++ L K L D M +R S + S + L+ M +G
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDE-MCDRGDSVDNYSTCI---LVKGMCNEGK 220
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ E G++ L++ + +P+ V Y+ I+ +LG +++A +++E+ +
Sbjct: 221 V--EVGRK---------LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL----------------------- 377
GF P + + GFCKEG + L+ ++ RGL
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 378 ------------KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
KP T++ ++I G+ E +G + G IP+ LS+ +++
Sbjct: 330 AESIGWIIANDCKPDVATYN-ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ 388
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C++++ + A+ L ++ ++G P TY +LI G G + + + + ++ + + P
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+++ ++ LC+ G+ A+ M R + PD +Y T+I + G+
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 188/472 (39%), Gaps = 71/472 (15%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +Y+I I+ L + G A L+ + K P + S+ P
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL----------------SYAP--- 385
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+Q Y K + + A + + RG + + ++ ++H L S + ++ +I
Sbjct: 386 -LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+A +++ LCK G R + A + E + P A V ++LI + G
Sbjct: 445 GVSPDAAIYNMLMSGLCKTG---RFLPA-KLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 281 LVE---------EEGKRERVA---VMV------------VTLLKRLLQQNLVPDSVGYSL 316
E E+G + V M+ + + R+ +++LVPD YS
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
I+ V+ + +A++++ M + +PN YTS GFC +G A E + M+ R
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
L P T+ +I A S LE+ + +E M+ +P+ ++F+ +++
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ----------- 669
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
GF+ + L + G+ + ++ M+ + + S + C
Sbjct: 670 ----------GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVC 719
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA--RVLQLCN 546
LC G ++ A + M + +PD + ++ GN+ R + CN
Sbjct: 720 LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCN 771
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 231/538 (42%), Gaps = 78/538 (14%)
Query: 70 QVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
++L L+ D AL F+ ++K F+ Y + L R+G D + +LE + +
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 130 KNRDPGA------------------VRAVTDSLIDAVGFVSGSH--RPVLDLLVQTYAKM 169
+ G + +V D +ID G +H +L+LLV + +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNS-L 170
Query: 170 RLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV-------------SLVWD---- 212
+L E + + G + +++FN ++ L R+ ++ LV D
Sbjct: 171 KLVEISH---AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 213 ------------------VYEHMIR-GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
+ E M+ G ++ N V++ +++ CKEG R DAL+ I
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSN-VSVNVIVHGFCKEG---RVEDALNFIQ 283
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
+ P ++L+ + + GH+ + + +M V +LQ+ PD
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHV------KHAIEIMDV-----MLQEGYDPDVYT 332
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y+ ++ +LG + A+E+ ++M+ PN+ Y + CKE +++EA EL R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 374 GRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+G+ P TF+ +I G C + R+ + +FE M G P +++ +++ LC
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+++A L ++ G TY+ LI G+ + +E +++ EME + + +
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+I LC+ ++EDA + + M PD Y +++ + G+ + + M S
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 178/366 (48%), Gaps = 22/366 (6%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF +FN++++ L ++ V ++ + M++ P+ T +I LCK G ++
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V+ LD+++ SP+ + ++LI + ++ VEE + RV L +
Sbjct: 350 VEVLDQMITR----DCSPNTVTYNTLISTLCKENQ-VEEATELARV----------LTSK 394
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
++PD ++ ++ + A+E++EEM G EP+ F Y C +G++DEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
+ +++ ME G T++ +I G C A R E +F+ M G + ++++ ++
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTR--EAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ LC++R VE A + +++ +G P + TY+ L+ + G++++ + M
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKT--MKSRLLTPDVAIYETMIASHEQKGNNARVL 542
P + + ++I LC+ G++E A K L++ MK LTP Y +I +K +
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAI 630
Query: 543 QLCNEM 548
L EM
Sbjct: 631 NLFREM 636
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 188/459 (40%), Gaps = 74/459 (16%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
S ++ +H + G + DA ++ ++ N+D GF + + L
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMS--NQD---------------GFFPDQY--TFNTL 301
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
V K + A ++ + G+ + ++NSV+ L + V +V + MI
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRM-VEKGHL 281
PN VT +I LCKE ++ + L R++ + P +SLI + + + H
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATE-LARVLTSK---GILPDVCTFNSLIQGLCLTRNH- 416
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL---------- 331
RVA+ L + + + PD Y++++ + G LD AL
Sbjct: 417 --------RVAM---ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 332 -------------------------EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
E+++EM + G NS Y + G CK R+++A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
+LM M G KP T++ ++ G G +++ + +AM G P +++ ++
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRG-GDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LC+ VE A+ L + KG Y+ +I+G K + E + L+ EM ++ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 487 LSV-FTSVIQCLCR-CGKLEDAEKYLKTMKSRLLTPDVA 523
+V + V + LC G + +A +L + + P+ +
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/484 (20%), Positives = 201/484 (41%), Gaps = 58/484 (11%)
Query: 84 ALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP--------- 134
AL+F + F +++ ++ L +AG + A +++ + + DP
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 135 ------GAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFR 188
G V+ + L + + + L+ T K E A ++ + ++G
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 189 VSLASFNSVLH--VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
+ +FNS++ L R+ RV++ +++E M P+ T ++ID+LC +G L +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAM--ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT--------- 297
+ L ++ + S + S I ++LI + E E + + V V+
Sbjct: 456 NMLKQM----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 298 ---------------LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
L+ +++ + PD Y+ ++ R G + A ++ + M +G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
EP+ Y + G CK GR++ A +L+R ++ +G+ ++ VI G + E +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR-KTTEAI 630
Query: 403 GVFEAMLGAG-FIPSCLSFDKMVEKLCENR-DVEQANANLTRLLDKGFLPGETTYSLLIK 460
+F ML P +S+ + LC + +A L LL+KGF+P ++ +L +
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 461 GYAAKGEVQEVLKLY--------YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKT 512
G + ++KL + E SM GL L G + D+ + +T
Sbjct: 691 GLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRT 750
Query: 513 MKSR 516
+SR
Sbjct: 751 YRSR 754
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
V + ++ K T+ A ++ +E+RG ++ S+N+V+ R + L V+ ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ PN T I+ID + Q ++ ++ + S+ + +V ++I + +
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS----SNIEVNGVVYQTIINGLCK 560
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
G + RE +A M+ ++ L + Y+ I+ + G +DSA+ YEEM
Sbjct: 561 VG---QTSKARELLANMIE-------EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
+G PN YTS G CK R+D+A+E+ M+ +G+K + +I G S
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN- 669
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
+E +F +L G PS ++ ++ ++ A ++L G TY+
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
LI G G + +LY EM+ + P ++T ++ L + G+ K + MK
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+TP+V IY +IA H ++GN +L +EM
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 52/360 (14%)
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
N ++ LCK+G D ++ + + P+ + ++++L GH
Sbjct: 442 NVFVCNTILSWLCKQG----KTDEATELLSKMESRGIGPNVVSYNNVML-----GHC--- 489
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
R++ + + +L++ L P++ YS+++ R +ALE+ M S E
Sbjct: 490 ---RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
N VY + G CK G+ +A EL+ M E + L +++ +I G G ++ +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK-EGEMDSAVA 605
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENR-------------------------------- 431
+E M G G P+ +++ ++ LC+N
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 432 ---DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
++E A+A + LL++G P + Y+ LI G+ G + L LY +M + L
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+T++I L + G L A + M++ L PD IY ++ +KG +V+++ EM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 211/523 (40%), Gaps = 92/523 (17%)
Query: 64 NDSLVEQVLLELKDPNDAKTALSFFHWSAKTHR--FNHGVRSYSIAIHVLVRAGLITDAR 121
+D+ V VLL + N+ + AL F++W A+ R F G + + IH+LV + T R
Sbjct: 71 DDASVIDVLLNRR--NNPEAALRFYNW-ARPWRGSFEDG-DVFWVLIHILVSSPE-TYGR 125
Query: 122 A---LLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDV 178
A L+ ++ N P A V+ + A F + + L+ Y+K R T+ A D+
Sbjct: 126 ASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDI 185
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI----RGRNY----------- 223
+ N L L + + ++ ++Y M+ G N
Sbjct: 186 VNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR 245
Query: 224 --------------------PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
P+++ + + A CK L ++L R M E+K P
Sbjct: 246 EEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAM-ANSLLREMKEKKLCV--P 302
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
S +S+IL V++G++ + + L +L + + V + ++ +
Sbjct: 303 SQETYTSVILASVKQGNMDD-----------AIRLKDEMLSDGISMNVVAATSLITGHCK 351
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP---- 379
L SAL ++++M G PNS ++ F K G +++A+E + ME GL P
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH 411
Query: 380 --------------------YGETFD---------HVIIGCAAGSGRLEECLGVFEAMLG 410
+ E+F+ + I+ G+ +E + M
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
G P+ +S++ ++ C ++++ A + +L+KG P TYS+LI G + Q
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
L++ M ++ V+ ++I LC+ G+ A + L M
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 138/315 (43%), Gaps = 19/315 (6%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCN-VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
V ++ K+ T A ++ N +E + VS S+NS++ + + YE
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M PN +T +++ LCK + + ++ D + N + L +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK--------------NKGVKLDIP 655
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
G L++ KR + L LL++ L P Y+ ++ LG++ +AL++Y++
Sbjct: 656 AYGALIDGFCKRSNMES-ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M+ G + YT+ G K+G + A EL M+ GL P E VI+ + G
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP-DEIIYTVIVNGLSKKG 773
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+ + + +FE M P+ L ++ ++ ++++A +LDKG LP T+
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 457 LLIKGYAAKGEVQEV 471
+L+ G G +Q V
Sbjct: 834 ILVSGQV--GNLQPV 846
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 36/275 (13%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L R++ + D+V L++ A +R ALE+ + G EP+S +Y+ C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 358 KEGRIDEAMELMRGMEGRGL-KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
K + A L+R M+ + L P ET+ VI+ + G +++ + + + ML G +
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILA-SVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++ ++ C+N D+ A ++ +G P T+S+LI+ + GE+++ L+ Y
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 477 EMEYKSMCP-------------------------------GLS---VFTSVIQCLCRCGK 502
+ME + P GL+ V +++ LC+ GK
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
++A + L M+SR + P+V Y ++ H ++ N
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 50/336 (14%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
D + AL + ++ +GV Y I+ L + G + AR LL ++ + R + +
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGV-VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 140 VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLH 199
+S+ID GF +D V Y +M C N G ++ ++ S+++
Sbjct: 587 Y-NSIID--GFFKEGE---MDSAVAAYEEM---------CGN----GISPNVITYTSLMN 627
Query: 200 VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L +++R+ ++ + M + +ID CK + N+++ + E
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK----RSNMESASALFSELLEE 683
Query: 260 SHSPSAIVNSSLILRMVEKGHLVE---------EEGKRERVAVMVVTLLKRLLQQN---- 306
+PS + +SLI G++V ++G R + TL+ LL+
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT-TLIDGLLKDGNLIL 742
Query: 307 ------------LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
LVPD + Y++IV+ + G ++M+EEM + PN +Y +
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG 390
G +EG +DEA L M +G+ P G TFD ++ G
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 219/521 (42%), Gaps = 44/521 (8%)
Query: 70 QVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
QV L+ +D + AL FF+W+ + R+ H Y + VL + L +R +L +
Sbjct: 176 QVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKR 235
Query: 130 KN--RDPGAVRAVTDS------LIDAVGFVSGSHRP-------VLDLLVQTYAKMRLTEA 174
+ R P A V S L DA+ ++ R + + + + + E
Sbjct: 236 RGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
A ++ G ++ ++N ++ RV ++ E M P+ V+ ++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV----------------EK 278
LCKE +R V+ D + K P + ++LI + EK
Sbjct: 356 YLCKE---KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 279 GHLVEEEG---------KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
G +++ G K R++ + + L + + PD V Y+ +V+ RLG +D
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
A ++ + M G +PN+ YT+ G C+ G+ EA E+M E P T+ VI+
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS-VIM 531
Query: 390 GCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL 449
G+L E V M+ GF P + + +++ LC + +A + L+KG
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKY 509
++ +I G+ E+ L + +M + + +T+++ L + G++ +A +
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 510 LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+K M + + P Y T+I + Q G ++ + +M S
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 19/331 (5%)
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI-RGRNYPNAVTLKIMIDALCKE 239
+ + +GFR+ +++++H L + R+S D+ M+ +G P+ VT +++ C+
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
G VD +++ H P+ + ++L+ M G +E RE ++
Sbjct: 468 G----EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE---ARE--------MM 512
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
+ P+S+ YS+I+H R G L A ++ EMV+ GF P C++
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
GR EA + M +G F VI G L+ L V + M +
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND-ELDAALSVLDDMYLINKHADVFT 631
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
+ +V+ L + + +A + ++L KG P TY +I Y G+V +++ + +M
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
+ C +++ VI+ LC GKLE+A+ L
Sbjct: 692 SRQKC--RTIYNQVIEKLCVLGKLEEADTLL 720
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 212/501 (42%), Gaps = 38/501 (7%)
Query: 52 DAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVL 111
D RKF ++L+ + V VL + A SFF WS K ++ H + Y + VL
Sbjct: 104 DGFCRKF-LIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 112 VRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRL 171
A + R + S K P V A + L++++ K+ +
Sbjct: 163 ALAKDVDRIR-FVSSEIKKFEFPMTVSAA-------------------NALIKSFGKLGM 202
Query: 172 TEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
E V ++ G +L ++N +++ L + V V+E M GR P+ VT
Sbjct: 203 VEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT 262
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
MI CK G Q+ ++ L R M R H I + M++ + + G
Sbjct: 263 MIKGYCKAGQTQKAMEKL-RDMETR---GHEADKIT----YMTMIQACYADSDFGS---- 310
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
V L + + ++ + +SL++ + G L+ ++E M+ G +PN +YT
Sbjct: 311 ---CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G+ K G +++A+ L+ M G KP T+ V+ G +GR+EE L F
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK-NGRVEEALDYFHTCRFD 426
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G + + + +++ L + V++A + +KG Y+ LI + +V E
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 472 LKLYYEMEYKSMC-PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+ L+ ME + C + +T ++ + + + E+A K M + +TP A + +
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 531 SHEQKGNNARVLQLCNEMASL 551
G AR ++ +E+A +
Sbjct: 547 GLCLSGKVARACKILDELAPM 567
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 226/558 (40%), Gaps = 84/558 (15%)
Query: 60 SLELNDSLVEQVLLEL-KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLIT 118
S EL+ V ++L +L ++ DA L FF WS H RS S IH+LV +
Sbjct: 104 STELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNM-- 161
Query: 119 DARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD----LLVQTYAKMRLTEA 174
+ RA+ L + G R++ + D F + R VL+ +L+ + R
Sbjct: 162 NYRAVDMLLCLVKKCSGEERSLCLVMKDL--FETRIDRRVLETVFSILIDCCIRERKVNM 219
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI-RGRNY---------- 223
A + V+ G S S+L + R + L + EHM+ RGR+
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 224 ------------------------PNAVTLKIMIDALCKEGLLQRNVDALDRIM------ 253
P+ V + ID LCK G L+ L ++
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 254 ------------------GERKRSSHS----PSAIVNSSLILRMVEKGHLVEEEGKRERV 291
E + HS P+ V SS + + G ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS------ 393
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
T+ + + + L+PD V Y+ ++ LG D A + + ++ SG P+ T
Sbjct: 394 -----TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G + G I +A + R M+ GLK T+++++ G + +L + + + M A
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG-YGKTHQLNKVFELIDEMRSA 507
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G P +++ ++ + +++AN ++ L+ +GF+P ++ +I G++ +G+ QE
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
L++ M M P + ++++ C+ ++E A + L PDV +Y T+I
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 532 HEQKGNNARVLQLCNEMA 549
+ G+ + +L M
Sbjct: 628 YCSVGDIEKACELIGLMV 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 118/295 (40%), Gaps = 33/295 (11%)
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
RER M + L ++ Q + P ++ +R+ L+ A E E M+ G N+
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV-FE 406
V + F +C +G D+ EL+ GM+ G++P F V I +G L+E V F+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT-VFIDKLCKAGFLKEATSVLFK 331
Query: 407 AMLGA-------------GFI------------------PSCLSFDKMVEKLCENRDVEQ 435
L GF P+ + + +C D+ +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A+ + + G LP Y+ +I GY G + + + + P L+ T +I
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
R G + DAE + MK+ L DV Y ++ + + +V +L +EM S
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG 240
N++ G ++ + ++N+++H ++ +++ V+++ + M P+ T I+I ++ G
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLI---------------------LRM---- 275
+D + I+ E R PS + + +I LRM
Sbjct: 528 Y----IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
V L+ K +R+ +V L +LL L PD V Y+ ++H +G ++ A E+
Sbjct: 584 VTCSALLHGYCKAQRMEKAIV-LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 336 EMVMSGFEPN 345
MV G PN
Sbjct: 643 LMVQRGMLPN 652
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 226/558 (40%), Gaps = 84/558 (15%)
Query: 60 SLELNDSLVEQVLLEL-KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLIT 118
S EL+ V ++L +L ++ DA L FF WS H RS S IH+LV +
Sbjct: 104 STELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNM-- 161
Query: 119 DARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD----LLVQTYAKMRLTEA 174
+ RA+ L + G R++ + D F + R VL+ +L+ + R
Sbjct: 162 NYRAVDMLLCLVKKCSGEERSLCLVMKDL--FETRIDRRVLETVFSILIDCCIRERKVNM 219
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI-RGRNY---------- 223
A + V+ G S S+L + R + L + EHM+ RGR+
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 224 ------------------------PNAVTLKIMIDALCKEGLLQRNVDALDRIM------ 253
P+ V + ID LCK G L+ L ++
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 254 ------------------GERKRSSHS----PSAIVNSSLILRMVEKGHLVEEEGKRERV 291
E + HS P+ V SS + + G ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS------ 393
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
T+ + + + L+PD V Y+ ++ LG D A + + ++ SG P+ T
Sbjct: 394 -----TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G + G I +A + R M+ GLK T+++++ G + +L + + + M A
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG-YGKTHQLNKVFELIDEMRSA 507
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G P +++ ++ + +++AN ++ L+ +GF+P ++ +I G++ +G+ QE
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
L++ M M P + ++++ C+ ++E A + L PDV +Y T+I
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 532 HEQKGNNARVLQLCNEMA 549
+ G+ + +L M
Sbjct: 628 YCSVGDIEKACELIGLMV 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 118/295 (40%), Gaps = 33/295 (11%)
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
RER M + L ++ Q + P ++ +R+ L+ A E E M+ G N+
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV-FE 406
V + F +C +G D+ EL+ GM+ G++P F V I +G L+E V F+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT-VFIDKLCKAGFLKEATSVLFK 331
Query: 407 AMLGA-------------GFI------------------PSCLSFDKMVEKLCENRDVEQ 435
L GF P+ + + +C D+ +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A+ + + G LP Y+ +I GY G + + + + P L+ T +I
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
R G + DAE + MK+ L DV Y ++ + + +V +L +EM S
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG 240
N++ G ++ + ++N+++H ++ +++ V+++ + M P+ T I+I ++ G
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLI---------------------LRM---- 275
+D + I+ E R PS + + +I LRM
Sbjct: 528 Y----IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
V L+ K +R+ +V L +LL L PD V Y+ ++H +G ++ A E+
Sbjct: 584 VTCSALLHGYCKAQRMEKAIV-LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 336 EMVMSGFEPN 345
MV G PN
Sbjct: 643 LMVQRGMLPN 652
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 167/363 (46%), Gaps = 16/363 (4%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GFR S+ + S+L+ + +R + + M PN V +I+ LCK L
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN-- 201
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+AL+ K+ + A+ ++LI + G + LL+ ++++
Sbjct: 202 -NALEVFYCMEKKGIRA-DAVTYNTLISGLSNSGRWTD-----------AARLLRDMVKR 248
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ P+ + ++ ++ V+ G+L A +Y+EM+ PN F Y S GFC G + +A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
+ M +G P T++ +I G S R+E+ + +F M G + +++ ++
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITG-FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C+ + A R++D G P TY++L+ G++++ L + +++ M
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
+ + +IQ LCR KL++A +++ + + PD Y TMI+ +KG +LC
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 546 NEM 548
M
Sbjct: 488 RRM 490
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 201/436 (46%), Gaps = 38/436 (8%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
+H + S++I IH R ++ A ALL + P V SL++ GF G+
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIV--TLGSLLN--GFCQGN--- 163
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
R EA + +++ GF ++ +N+V++ L ++ ++ +V+ M
Sbjct: 164 ------------RFQEAV-SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ +AVT +I L G R DA R++ + + P+ I ++LI V+
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSG---RWTDAA-RLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
+G+L+E L K ++++++VP+ Y+ +++ G L A M++ M
Sbjct: 267 EGNLLEAR-----------NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSG 396
V G P+ Y + GFCK R+++ M+L M +GL T++ +I G C AG
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG-- 373
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+L VF M+ G P ++++ +++ LC N +E+A + L TY+
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
++I+G +++E L+ + K + P + ++I LCR G +A+K + MK
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 517 LLTPDVAIYETMIASH 532
P IY+ + H
Sbjct: 494 GFMPSERIYDETLRDH 509
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 16/381 (4%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIM 232
+ AF + C + S+ F VL V+ + ++ +V +Y M + + I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 233 IDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
I C+ L + L ++M + PS + SL+ + E
Sbjct: 121 IHCFCRCSRLSLALALLGKMM----KLGFRPSIVTLGSLLNGFCQGNRFQE--------- 167
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
V+L+ + VP+ V Y+ +++ + L++ALE++ M G ++ Y +
Sbjct: 168 --AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
G GR +A L+R M R + P F +I G L E +++ M+
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDP-NVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
+P+ +++ ++ C + + A ++ KG P TY+ LI G+ V++ +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
KL+ EM Y+ + + ++I C+ GKL A+K M ++PD+ Y ++
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 533 EQKGNNARVLQLCNEMASLEL 553
G + L + ++ E+
Sbjct: 405 CNNGKIEKALVMVEDLQKSEM 425
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 189/466 (40%), Gaps = 72/466 (15%)
Query: 85 LSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSL 144
+ FF W+ K F H +Y I L A L + ++ + VR S+
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEV---------VRNTYVSV 160
Query: 145 IDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS 204
AV L LV+ + ++ A V + R + + +++NSV+ +L +
Sbjct: 161 SPAV----------LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE 210
Query: 205 DRVSLVWDVYEHMI-RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
+ V +VY M G +P+ +T +I + K G RN D+ R+ E K + P
Sbjct: 211 GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG---RN-DSAIRLFDEMKDNCMQP 266
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ + Y+ ++ +
Sbjct: 267 TEKI----------------------------------------------YTTLLGIYFK 280
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
+G ++ AL+++EEM +G P + YT G K GR+DEA + M GL P
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP-DVV 339
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR-DVEQANANLTR 442
F + ++ GR+EE VF M P+ +S++ +++ L E++ V + ++ +
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+ P E TYS+LI GY V++ L L EM+ K P + + S+I L + +
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
E A + K +K +Y MI + G + + L NEM
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 174/456 (38%), Gaps = 94/456 (20%)
Query: 27 RNSNHNAVDDVAAAIC---DSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKD----PN 79
+ H V +V +C D F ++ A+ + L NDS + ++ E+KD P
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI-RLFDEMKDNCMQPT 267
Query: 80 DA--KTALSFFHWSAKTHRF------------NHGVRSYSIAIHVLVRAGLITDARALLE 125
+ T L + K + + V +Y+ I L +AG + +A +
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEAR 185
+ P V ++L++ +G V ++ L +++M +
Sbjct: 328 DMLRDGLTPDVV--FLNNLMNILGKVGR-----VEELTNVFSEMGMWRCT---------- 370
Query: 186 GFRVSLASFNSVLHVLQRSD-RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
++ S+N+V+ L S VS V ++ M P+ T I+ID CK +++
Sbjct: 371 ---PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+ L+ + + K P+A + L+ GK +R L K L +
Sbjct: 428 ALLLLEEM--DEKGFPPCPAAYCS------------LINALGKAKRYEA-ANELFKELKE 472
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
S Y++++ + G L A++++ EM G P+ + Y + G K G I+E
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE 532
Query: 365 AMELMRGMEGRG-----------------------------------LKPYGETFDHVII 389
A L+R ME G +KP G T++ ++
Sbjct: 533 ANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN-TLL 591
Query: 390 GCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
GC A +G EE + M GF +++ +++
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 188/436 (43%), Gaps = 36/436 (8%)
Query: 94 THRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG 153
+H N Y I V+ + G++ A+AL + + A P A +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS------------ 387
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
L++ Y + + +++ ++ R +S ++ +V+ + S + +++
Sbjct: 388 --------LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
+ MI PN V +I + R DA+ R++ E K +P +SLI+
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQN---SRFGDAM-RVLKEMKEQGIAPDIFCYNSLII 495
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ + + E + L +++ L P++ Y + + SA +
Sbjct: 496 GLSKAKRMDEAR-----------SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA 393
+EM G PN + T +CK+G++ EA R M +G+ +T+ V++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY-TVLMNGLF 603
Query: 394 GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
+ ++++ +F M G G P S+ ++ + ++++A++ ++++G P
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
Y++L+ G+ GE+++ +L EM K + P + ++I C+ G L +A + M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 514 KSRLLTPDVAIYETMI 529
K + L PD +Y T++
Sbjct: 724 KLKGLVPDSFVYTTLV 739
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 219/525 (41%), Gaps = 47/525 (8%)
Query: 10 LLSRVSFHKLHSHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVE 69
L++R +F S + N + D +A I ++ D + S+E+N +V
Sbjct: 12 LVTRANFLLFRSFSV-----NVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVL 66
Query: 70 QVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
VL K +D LSFF+W + S+S L G A +++E +
Sbjct: 67 SVLRS-KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE 125
Query: 130 KNRDPGAVRAVTDSLID-AVGFVSGSHRPVL-DLLVQTY-AKMRLTEAAFDVCCNVEARG 186
+N V V S++ + FV S VL +L Y AK + EA F V +
Sbjct: 126 RNW---PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF-VFSSSMGLE 181
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
L+ +L L R +R+ L WDVY+ M+ + T ++I A C+ G +Q
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQN 306
D L + E + +A +N L++ E ++ +
Sbjct: 242 DVLFKTEKEFR------TATLNVDGALKLKES-----------------------MICKG 272
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
LVP Y +++ ++ L+ A + EM G ++ Y+ G K D A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 367 ELMRGMEGRG--LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
L+ M G +KPY +D I + G +E+ +F+ M+ +G IP ++ ++
Sbjct: 333 GLVHEMVSHGINIKPY--MYDCCIC-VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
E C ++V Q L + + + TY ++KG + G++ + EM
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
P + ++T++I+ + + DA + LK MK + + PD+ Y ++I
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 174/393 (44%), Gaps = 24/393 (6%)
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV----SLVWDVYE 215
D+L+ K++ E A + +++ G + +++ ++ L + LV ++
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 216 HMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRM 275
H I + Y + +M KEG++++ D ++ S P A +SLI
Sbjct: 341 HGINIKPYMYDCCICVM----SKEGVMEKAKALFDGMIA----SGLIPQAQAYASLI--- 389
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
+G+ RE+ LL + ++N+V Y +V G LD A + +
Sbjct: 390 --EGYC------REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
EM+ SG PN +YT+ F + R +AM +++ M+ +G+ P ++ +IIG +
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
R++E M+ G P+ ++ + E + A+ + + + G LP +
Sbjct: 502 -RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
+ LI Y KG+V E Y M + + +T ++ L + K++DAE+ + M+
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 516 RLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ + PDV Y +I + GN + + +EM
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 183/447 (40%), Gaps = 36/447 (8%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y + I L + + DA++LL + D++G +H LL
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEM------------------DSLGVSLDNH--TYSLL 318
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ K R +AA + + + G + ++ + V+ + + +++ MI
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
P A +I+ C+E +NV ++ E K+ + S +++ M G L
Sbjct: 379 IPQAQAYASLIEGYCRE----KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL- 433
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
+G ++K ++ P+ V Y+ ++ ++ A+ + +EM G
Sbjct: 434 --DG--------AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
P+ F Y S G K R+DEA + M GLKP T+ I G S
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS-EFASAD 542
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+ M G +P+ + ++ + C+ V +A + ++D+G L TY++L+ G
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
+V + +++ EM K + P + + +I + G ++ A M LTP+V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 523 AIYETMIASHEQKGNNARVLQLCNEMA 549
IY ++ + G + +L +EM+
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMS 689
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 149/339 (43%), Gaps = 21/339 (6%)
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
Y M+ +A T ++++ L K VD + I E + +P LI
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFK----NDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ G++ + ++ ++++ L P+ + Y++++ R G ++ A E+
Sbjct: 636 GFSKLGNMQKAS-----------SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA 393
+EM + G PN+ Y + G+CK G + EA L M+ +GL P + ++ GC
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 394 GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF----L 449
+E + +F G S F+ ++ + + E L RL+D F
Sbjct: 745 -LNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKY 509
P + TY+++I +G ++ +L+++M+ ++ P + +TS++ + G+ +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 510 LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ + PD +Y +I + ++G + L L ++M
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 165/392 (42%), Gaps = 68/392 (17%)
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDR 251
++ +++ L ++D+V +++ M RG+ P+ + ++I+ K G +Q+ D
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
++ E +P+ I+ + L+ G + E+ K LL + + L P++
Sbjct: 653 MVEE----GLTPNVIIYNMLLGGFCRSGEI--EKAKE---------LLDEMSVKGLHPNA 697
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
V Y I+ + G L A +++EM + G P+SFVYT+ G C+ ++ A+ + G
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-G 756
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF----IPSCLSFDKMVEKL 427
+G F + +I G+ E V ++ F P+ ++++ M++ L
Sbjct: 757 TNKKGCASSTAPF-NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
C+ ++E A ++ + +P TY+ L+ GY G E+ ++ E + P
Sbjct: 816 CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDH 875
Query: 488 SVFTSVIQCL--------------------------------CRC--------GKLEDAE 507
+++ +I CR G++E AE
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 508 KYLKTMKSRLLTPDVA-----IYETMIASHEQ 534
K ++ M PD A I E+ I+S+++
Sbjct: 936 KVMENMVRLQYIPDSATVIELINESCISSNQR 967
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 216/508 (42%), Gaps = 70/508 (13%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALL------ESLAAKNRDPGAV--------RAVTDS 143
N VR+ + + VL+R GL+ DA +L ES+ NR + R +T+
Sbjct: 184 NSQVRN--VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEE 241
Query: 144 LIDAV--GFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
I A+ F S P L + + K AA+D+ ++ + FN++L
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALL 301
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L R+ +S + D+ M + P+ VTL I+I+ LCK + ++ +++ G+R
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTD 361
Query: 259 SSH--SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ +I ++LI + + G L E E L++ L++ P++V Y+
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEE----------LLVRMKLEERCAPNAVTYNC 411
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ R G L++A E+ M +PN + GG C+ ++ A+ ME G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC------------------- 417
+K T+ +I C + S +E+ + +E ML AG P
Sbjct: 472 VKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 418 ----------------LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L+++ ++ C+ + E+ LT + +G P TY+ LI
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK-SRLLTP 520
+ + + V ++ +M + P ++ + +VI C G+L++A K K M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
+ IY +I + + GN + L L EM
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 167/428 (39%), Gaps = 79/428 (18%)
Query: 156 RP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLAS--------FNSVLHVLQRS 204
RP L +L+ T K R + A +V + RG R + FN+++ L +
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVF--EKMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 205 DRVSLVWDVYEHM-IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
R+ ++ M + R PNAVT +ID C+ G L+ + + R+ K P
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM----KEDEIKP 439
Query: 264 SAIVNSSLILRMVEKGHL---------VEEEGKRERVAVMVVTLL--------------- 299
+ + ++++ M L +E+EG + V V +TL+
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV-VTYMTLIHACCSVSNVEKAMYW 498
Query: 300 -KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
+++L+ PD+ Y ++ ++ A+ + E++ GF + Y G FC
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVI------------------------------ 388
+ ++ E++ ME G KP T++ +I
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 389 ----IGCAAGSGRLEECLGVFEAM-LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
I G L+E L +F+ M L + P+ + ++ ++ + + QA + +
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
K P TY+ L K K + + +LKL EM +S P +++ L +L
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 504 EDAEKYLK 511
K+++
Sbjct: 739 VKLRKFMQ 746
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 216/508 (42%), Gaps = 70/508 (13%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALL------ESLAAKNRDPGAV--------RAVTDS 143
N VR+ + + VL+R GL+ DA +L ES+ NR + R +T+
Sbjct: 184 NSQVRN--VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 144 LIDAV--GFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
I A+ F S P L + + K A+D+ ++ + FN++L
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L R+ +S + D+ M + P+ VTL I+I+ LCK + ++ +++ G+R
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 259 SSH--SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ +I ++LI + + G L E E L++ L++ VP++V Y+
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEE----------LLVRMKLEERCVPNAVTYNC 411
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ R G L++A E+ M +PN + GG C+ ++ A+ ME G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC------------------- 417
+K T+ +I C + S +E+ + +E ML AG P
Sbjct: 472 VKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 418 ----------------LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L+++ ++ C+ + E+ LT + +G P TY+ LI
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK-SRLLTP 520
+ + + V ++ +M + P ++ + +VI C G+L++A K K M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
+ IY +I + + GN + L L EM
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 181/411 (44%), Gaps = 39/411 (9%)
Query: 156 RP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLAS--------FNSVLHVLQRS 204
RP L +L+ T K R + A +V + RG R + FN+++ L +
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVF--EQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 205 DRVSLVWDVYEHM-IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
R+ ++ M + R PNAVT +ID C+ G L+ + + R+ K P
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM----KEDEIKP 439
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ + ++++ G + G M V + ++ + + V Y ++HA
Sbjct: 440 NVVTVNTIV------GGMCRHHGLN-----MAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
+ +++ A+ YE+M+ +G P++ +Y + G C+ R +A+ ++ LK G +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-----LKEGGFS 543
Query: 384 FD----HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
D +++IG E+ + M G P ++++ ++ +++D E
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS-MCPGLSVFTSVIQCLC 498
+ ++ + G P TTY +I Y + GE+ E LKL+ +M S + P ++ +I
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
+ G A + MK +++ P+V Y + +K +L+L +EM
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 166/376 (44%), Gaps = 16/376 (4%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ + + A V + G+ S+ +F S+LH +R+ + + M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN V +ID LCK G L ++ L+ E ++ + ++L+ + G
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLN----EMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ +L+ ++++++ PD V ++ ++ V+ G+LD A E+Y+EM+ S
Sbjct: 227 WSD-----------AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
+PN+ Y S G C GR+ +A + M +G P T++ +I G ++E
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR-MVDE 334
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ +F+ M GF +++ ++ C+ + A ++ + P T+ +L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G GE++ L + +M G+ + +I LC+ K+E A + + + P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 521 DVAIYETMIASHEQKG 536
D Y MI + G
Sbjct: 455 DARTYTIMILGLCKNG 470
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 321 KVRLGSLDS-----ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
K+R G L S A ++ EMV S P+ +T R + + + ME
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G+ +F ++I C RL L V M+ G+ PS ++F ++ C +
Sbjct: 101 GISHDLYSFT-ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A + + ++ G+ P Y+ LI G GE+ L+L EME K + + + +++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LC G+ DA + L+ M R + PDV + +I ++GN +L EM
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 216/508 (42%), Gaps = 70/508 (13%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALL------ESLAAKNRDPGAV--------RAVTDS 143
N VR+ + + VL+R GL+ DA +L ES+ NR + R +T+
Sbjct: 184 NSQVRN--VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 144 LIDAV--GFVSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
I A+ F S P L + + K A+D+ ++ + FN++L
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L R+ +S + D+ M + P+ VTL I+I+ LCK + ++ +++ G+R
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 259 SSH--SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ +I ++LI + + G L E E L++ L++ VP++V Y+
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEE----------LLVRMKLEERCVPNAVTYNC 411
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ R G L++A E+ M +PN + GG C+ ++ A+ ME G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC------------------- 417
+K T+ +I C + S +E+ + +E ML AG P
Sbjct: 472 VKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 418 ----------------LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L+++ ++ C+ + E+ LT + +G P TY+ LI
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK-SRLLTP 520
+ + + V ++ +M + P ++ + +VI C G+L++A K K M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
+ IY +I + + GN + L L EM
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 181/411 (44%), Gaps = 39/411 (9%)
Query: 156 RP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLAS--------FNSVLHVLQRS 204
RP L +L+ T K R + A +V + RG R + FN+++ L +
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVF--EQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 205 DRVSLVWDVYEHM-IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
R+ ++ M + R PNAVT +ID C+ G L+ + + R+ K P
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM----KEDEIKP 439
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+ + ++++ G + G M V + ++ + + V Y ++HA
Sbjct: 440 NVVTVNTIV------GGMCRHHGLN-----MAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
+ +++ A+ YE+M+ +G P++ +Y + G C+ R +A+ ++ LK G +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-----LKEGGFS 543
Query: 384 FD----HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
D +++IG E+ + M G P ++++ ++ +++D E
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS-MCPGLSVFTSVIQCLC 498
+ ++ + G P TTY +I Y + GE+ E LKL+ +M S + P ++ +I
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
+ G A + MK +++ P+V Y + +K +L+L +EM
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ ++R A V ++ GF + L ++N ++ + + V+++ M +
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+++T +I K ++ ++++R+M + + P+ ++I G L
Sbjct: 577 KKPDSITYNTLISFFGK----HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 282 VEEEGKRERVAVMVVTLLKRL-LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
E + L K + L + P++V Y+++++A +LG+ AL + EEM M
Sbjct: 633 DE-----------ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
PN Y + ++ + + ++LM M + +P T + +++ +GS L
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME-ILMERLSGSDEL 738
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 214/482 (44%), Gaps = 28/482 (5%)
Query: 81 AKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGL----ITDARALLESLAAKNRDPGA 136
+T +SFF W A+T + + +VR+ L DA++LL S R A
Sbjct: 55 PETLVSFFQW-AQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYI---RTSDA 110
Query: 137 VRAVTDSLIDA-VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFN 195
++ +SL+ + + + D+ + Y A + + + +L + N
Sbjct: 111 SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 196 SVLHVLQR---SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
++L L R S +S +V++ M++ N T ++++ C EG L+ + L+R+
Sbjct: 171 TLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
+ E K + P + ++++ M +KG L + + LL + + LVP+ V
Sbjct: 231 VSEFKVN---PDNVTYNTILKAMSKKGRLSD-----------LKELLLDMKKNGLVPNRV 276
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ +V+ +LGSL A ++ E M + P+ Y G C G + E +ELM M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ L+P T++ +I GC LE + E M G + ++ + ++ LC+
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLE-ARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 433 VEQANANLTRLLD-KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
E + L+D GF P TY LIK Y G++ L++ EM K +
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
+++ LC+ KL++A L + R D Y T+I ++ + L++ +EM +
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 552 EL 553
++
Sbjct: 516 KI 517
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 200/479 (41%), Gaps = 60/479 (12%)
Query: 100 GVRSYSIAIHVLVRAGLITDARALLESLAAKNR-DPGAVRAVTDSLIDAVGFVSGSHRPV 158
V+++++ ++ G + DA +LE + ++ + +P V T
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT----------------- 245
Query: 159 LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI 218
+L K RL++ ++ +++ G + ++N++++ + + + + E M
Sbjct: 246 --ILKAMSKKGRLSDLK-ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ P+ T I+I+ LC G ++ ++ +D + K P + ++LI E
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAM----KSLKLQPDVVTYNTLIDGCFEL 358
Query: 279 GHLVE----------------------------EEGKRERVAVMVVTLLKRLLQQNLVPD 310
G +E +E KRE V V L+ PD
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD---MHGFSPD 415
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
V Y ++ A +++G L ALEM EM G + N+ + CKE ++DEA L+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
RG T+ +I+G ++E+ L +++ M P+ +F+ ++ LC +
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREE-KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
E A L + G LP ++T++ +I GY +G V++ + Y E S P
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 491 TSVIQCLCRCGKLEDAEKYLKTM-KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
++ LC+ G E A + T+ + R + D Y TMI++ + L +EM
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 177/418 (42%), Gaps = 42/418 (10%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y+I I+ L AG + + L++++ + P V ++LID
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV--TYNTLIDGC-------------- 355
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
++ L+ A + +E G + + + N L L + ++ V + ++
Sbjct: 356 ----FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 223 Y-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGER--KRSSHSPSAIVNSSLILRMVEKG 279
+ P+ VT +I A K G L ++ + R MG++ K ++ + + I+++ R +++
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMM-REMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
H LL ++ + D V Y ++ R ++ ALEM++EM
Sbjct: 471 H----------------NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
P + S GG C G+ + AME + GL P TF+ +I+G GR+E
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK-EGRVE 573
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ + + F P + + ++ LC+ E+A L+++ + TY+ +I
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMI 632
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+ +++E L EME K + P + S I L GKL + ++ LK +
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 122/307 (39%), Gaps = 57/307 (18%)
Query: 99 HGVRSYSIAIHVLVRAGL-ITDARALLESLAAKNRDPGAVRAVT-DSLIDAVGFVSGSHR 156
HG + H L++A L + D LE + + + +T ++++DA+
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL-------- 461
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
K R + A ++ + RGF V ++ +++ R ++V ++++
Sbjct: 462 ----------CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M + + P T +I LC G + ++ D E S P +S+IL
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD----ELAESGLLPDDSTFNSIILGYC 567
Query: 277 EKGHLVE----------------------------EEGKRERVAVMVVTLLKRLLQQNLV 308
++G + + +EG E+ + L+++ V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA----LNFFNTLIEEREV 623
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
D+V Y+ ++ A + L A ++ EM G EP+ F Y SF ++G++ E EL
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 369 MRGMEGR 375
++ G+
Sbjct: 683 LKKFSGK 689
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 201/453 (44%), Gaps = 34/453 (7%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAV------------RAV 140
+T +H + +YSI I+ R ++ A A+L + +P V + +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 141 TDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEA---RGFRVSLASFNSV 197
+D++ V ++P + L A + V+ RG + L ++ +V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERK 257
++ L + + L ++ M R N V +ID+LCK R+V+ + E +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK----YRHVEVAVDLFTEME 285
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
P+ + +SLI + G + LL +L++ + P+ V ++ +
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDAS-----------RLLSNMLEKKINPNVVTFNAL 334
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
+ A + G L A +++EEM+ +P++ Y GFC R+DEA ++ + M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
P +T++ +I G R+E+ + +F M G + + +++ +++ + D + A
Sbjct: 395 LPNIQTYNTLING-FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
+++ TYS+L+ G + G++ L ++ ++ M + ++ ++I+ +
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 498 CRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
C+ GK+ +A ++ + PDV Y TMI+
Sbjct: 514 CKAGKVGEAWDLFCSLS---IKPDVVTYNTMIS 543
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 169/389 (43%), Gaps = 16/389 (4%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ AKM E + ++ G L +++ ++ R ++SL V M++
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ VTL +++ C + V +D+++ + P ++LI G
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMV----EMGYKPDTFTFTTLI-----HGLF 199
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ + V L+ +++Q+ PD V Y +V+ + G +D AL + +M +
Sbjct: 200 LHNKASE------AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+ N ++ + CK ++ A++L ME +G++P T++ +I C GR +
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS-LINCLCNYGRWSDA 312
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ ML P+ ++F+ +++ + + +A ++ + P TY+LLI G
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ + E +++ M K P + + ++I C+C ++ED + + M R L +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y T+I Q G+ + +M S
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 193/449 (42%), Gaps = 41/449 (9%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG-SHRPVLDL 161
+++ IH L ++A AL++ + + P V T V+G R +DL
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT--------VVNGLCKRGDIDL 241
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
+ KM EA + ++ FN+++ L + V + D++ M
Sbjct: 242 ALNLLNKM-------------EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN VT +I+ LC G R DA R++ +P+ + ++LI ++G L
Sbjct: 289 IRPNVVTYNSLINCLCNYG---RWSDA-SRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
VE E E ++Q+++ PD++ Y+L+++ LD A +M++ MV
Sbjct: 345 VEAEKLHEE-----------MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
PN Y + GFCK R+++ +EL R M RGL T+ +I G +G +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ-AGDCDSA 452
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
VF+ M+ +++ ++ LC ++ A L Y+ +I+G
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
G+V E L+ + K P + + ++I LC L++A+ + MK P+
Sbjct: 513 MCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y T+I ++ + + A +L EM S
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 120/288 (41%), Gaps = 36/288 (12%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V L +++ P V ++ ++ A ++ + + + E+M G + + Y+ F
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FC+ ++ A+ ++ M G +P T ++ G S R+ + + + + M+ G+ P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-YCHSKRISDAVALVDQMVEMGYKP 186
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK-- 473
+F ++ L + +A A + +++ +G P TY ++ G +G++ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 474 ---------------------------------LYYEMEYKSMCPGLSVFTSVIQCLCRC 500
L+ EME K + P + + S+I CLC
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G+ DA + L M + + P+V + +I + ++G +L EM
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
++D+A++L M P F+ ++ A + E + + E M G ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNK-LLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
+ C + A A L +++ G+ P T S L+ GY + + + L +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
P FT++I L K +A + M R PD+ Y T++ ++G+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 541 VLQLCNEM 548
L L N+M
Sbjct: 242 ALNLLNKM 249
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 174/373 (46%), Gaps = 19/373 (5%)
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM-IRGRNYPNAVTLKIMIDALCKEG 240
VE+R S+ F +L+V+ + + +V ++ +H+ I G ++ + T ++++ C+
Sbjct: 64 VESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH-DLYTCNLLMNCFCQSS 121
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
L ++M + P + +SLI G+ +EE ++++
Sbjct: 122 QPYLASSFLGKMM----KLGFEPDIVTFTSLINGFC-LGNRMEE----------AMSMVN 166
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
++++ + PD V Y+ I+ + + G ++ AL ++++M G P+ +YTS G C G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
R +A L+RGM R +KP TF+ +I G+ + ++ M+ P+ ++
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFN-ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
++ C V++A + KG P Y+ LI G+ +V + +K++YEM
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
K + +T++IQ + GK A++ M SR + P++ Y ++ G +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 541 VLQLCNEMASLEL 553
L + +M E+
Sbjct: 406 ALMIFEDMQKREM 418
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 154/334 (46%), Gaps = 19/334 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF + +F S+++ +R+ + M+ P+ V +ID+LCK G +
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
+ D++ R P ++ +SL+ + G + + +LL+ + ++
Sbjct: 197 LSLFDQMENYGIR----PDVVMYTSLVNGLCNSGRWRDAD-----------SLLRGMTKR 241
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ PD + ++ ++ A V+ G A E+Y EM+ PN F YTS GFC EG +DEA
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
++ ME +G P + +I G ++++ + +F M G + +++ +++
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLING-FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM-- 483
+ A + ++ +G P TY++L+ G+V++ L ++ +M+ + M
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 484 -CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
P + + ++ LC GKLE A + M+ R
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 172/354 (48%), Gaps = 19/354 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G + + + +++ L ++ V+ +++ M P+ V +++ LC G R+
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR-WRD 230
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
D+L R M +RK P I ++LI V++G ++ E L +++
Sbjct: 231 ADSLLRGMTKRKIK---PDVITFNALIDAFVKEGKFLDAE-----------ELYNEMIRM 276
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
++ P+ Y+ +++ G +D A +M+ M G P+ YTS GFCK ++D+A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
M++ M +GL T+ +I G G+ VF M+ G P+ +++ ++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQ-VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 426 KLCENRDVEQANANLTRLLDK---GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
LC N V++A + + G P TY++L+ G G++++ L ++ +M +
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
M G+ +T +IQ +C+ GK+++A ++ S+ + P+V Y TMI+ ++G
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
+ AL+++ MV S P+ +T K + D + L ++ G+ T +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
+++ C S + M+ GF P ++F ++ C +E+A + + ++++
Sbjct: 112 -LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
G P Y+ +I G V L L+ +ME + P + ++TS++ LC G+ D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
A+ L+ M R + PDV + +I + ++G +L NEM + +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
+ +Y+ I+ G + +AR + + K P D V + S
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP-----------DVVAYTS-------- 322
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ + K + + A + + +G + ++ +++ + + ++ +V+ HM+
Sbjct: 323 -LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN T +++ LC G +++ + + M +R+ +P+ + L+ H
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFED-MQKREMDGVAPNIWTYNVLL-------H 433
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ GK E+ ++ + KR + + Y++I+ + G + +A+ ++ +
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIG----IITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
G +PN YT+ G +EG EA L R M+ G+
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/563 (22%), Positives = 241/563 (42%), Gaps = 62/563 (11%)
Query: 13 RVSFHKLHSHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVL 72
R SF H A + SN D + +A+C + R+RR W+ + +F S L + L+ +VL
Sbjct: 9 RTSFLVRCFHVA-KKFSNPEPEDILFSALCLNLRQRR-WNTL-HQFSS-SLTNPLISRVL 64
Query: 73 LELKDPNDAKTALSFFHWSAKTH---RFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
E + + K AL F++W +++ + + + + IH+LV + DA +++ +L +
Sbjct: 65 REFR--SSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMS 122
Query: 130 KNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRV 189
+ + V LI + GS V D LV+ + + A++V A GF V
Sbjct: 123 VEGEKLSPLHVLSGLIRSYQ-ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCV 181
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEH--------------------------------- 216
S+ + N+ + L + + W VY+
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF 241
Query: 217 --MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILR 274
M++ +PN V+ +MID CK G ++ + L + MG + SP+A+ +S+I
Sbjct: 242 YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK-MGMMSGNFVSPNAVTYNSVING 300
Query: 275 MVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMY 334
+ G L E R +++ + + Y +V A R GS D AL +
Sbjct: 301 FCKAGRLDLAERIR-----------GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 335 EEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAG 394
+EM G N+ +Y S EG I+ AM ++R M + ++ T V+ G
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR- 408
Query: 395 SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT 454
+G ++E + + + + + ++ ++ + A+ L +L +G +
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 455 YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
+ LI GY +G+++ L++Y M + L ++ S++ L + G AE + M+
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Query: 515 SRLLTPDVAIYETMIASHEQKGN 537
+ D+ Y T++ + GN
Sbjct: 529 IK----DIVTYNTLLNESLKTGN 547
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 151/339 (44%), Gaps = 24/339 (7%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
LV Y + ++ A +C + ++G V+ +NS+++ L + V M
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ T I++ LC+ G ++ V+ R + E+K + +++L+ V
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVE-FQRQISEKKLVE---DIVCHNTLMHHFV----- 442
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
R++ +L +L Q L D++ + ++ ++ G L+ ALE+Y+ M+
Sbjct: 443 ------RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
N +Y S G K G A ++ ME + + Y + ++ + +G +EE
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTY-----NTLLNESLKTGNVEEA 551
Query: 402 LGVFEAML---GAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ M G + S ++F+ M+ LC+ E+A L ++++G +P TY L
Sbjct: 552 DDILSKMQKQDGEKSV-SLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
I ++ ++V++L+ + + + P ++ S+++ L
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 163/356 (45%), Gaps = 28/356 (7%)
Query: 186 GFRVSLASFNSVL----HVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEG 240
GF S+ +F S++ HV + + +SLV I G Y PN V +ID+LC++G
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLV-----DQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
+ +D L + K+ P + +SLI R+ G G R+ L
Sbjct: 199 QVNTALDVLKHM----KKMGIRPDVVTYNSLITRLFHSG----TWGVSARI-------LS 243
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
+++ + PD + +S ++ + G L A + Y EM+ PN Y S G C G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
+DEA +++ + +G P T++ +I G C A R+++ + + M G +
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK--RVDDGMKILCVMSRDGVDGDTFT 361
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ + + C+ A L R++ G P T+++L+ G G++ + L +++
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
G+ + +I+ LC+ K+EDA ++ + ++PDV Y TM+ +K
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 19/337 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G+ ++ +N+++ L +V+ DV +HM + P+ VT +I L G
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG--TWG 236
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V A RI+ + R SP I S+LI ++G L+E + + ++Q+
Sbjct: 237 VSA--RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNE-----------MIQR 283
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
++ P+ V Y+ +++ G LD A ++ +V GF PN+ Y + G+CK R+D+
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
M+++ M G+ T++ + G C AG E V M+ G P +F+ ++
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE--KVLGRMVSCGVHPDMYTFNILL 401
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ LC++ + +A L L + G TY+++IKG +V++ L+ + K +
Sbjct: 402 DGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Query: 485 PGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRLLTP 520
P + + +++ L R +A E Y K K L P
Sbjct: 462 PDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+ ++ L ++++ P V + +V+ + A+ + +++V G+EPN +Y +
Sbjct: 132 LALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTII 191
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI------------------------- 388
C++G+++ A+++++ M+ G++P T++ +I
Sbjct: 192 DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
Query: 389 ---------IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
I G+L E + M+ P+ ++++ ++ LC + +++A
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L L+ KGF P TY+ LI GY V + +K+ M + + ++ Q C+
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVL 542
GK AEK L M S + PD+ + ++ G + L
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 1/222 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
+ AL ++ +M S P+ ++ K + + + L R +E G+ +F
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT- 118
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
+I C RL L M+ GF PS ++F +V C +A + + +++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ P Y+ +I KG+V L + M+ + P + + S+I L G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ L M ++PDV + +I + ++G + NEM
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 175/367 (47%), Gaps = 20/367 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G + ++A +L+ L +++R+ V E M+ P+A +++ LCK G N
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG----N 156
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V +++ + + + + + ++L+ + G L + + ++RL+Q+
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS-----------LQFVERLMQK 205
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
L P++ YS ++ A + D A+++ +E+++ G EPN Y GFCKEGR D+A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
M L R + +G K +++ +++ C GR EE + M G PS ++++ ++
Sbjct: 266 MALFRELPAKGFKANVVSYN-ILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 426 KLCENRDVEQANANLTRLLDKG---FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
L + EQA + + + KG F T+Y+ +I +G+V V+K EM Y+
Sbjct: 325 SLAFHGRTEQA-LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVL 542
P + ++ K+++A ++++ ++ Y+++I S +KGN
Sbjct: 384 CKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAF 443
Query: 543 QLCNEMA 549
QL EM
Sbjct: 444 QLLYEMT 450
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 167/396 (42%), Gaps = 23/396 (5%)
Query: 140 VTDSLIDAVGFVSGSHRPVL---DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
++DS V+G H+P + L+ K + A V + + G +++
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYP-NAVTLKIMIDALCKEGLLQRNVDALDRIMGE 255
+++ L + V + E M YP N VT ++ LC G L +++ ++R+M
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM-- 203
Query: 256 RKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYS 315
+ +P+A S L+ E +ER V LL ++ + P+ V Y+
Sbjct: 204 --QKGLAPNAFTYSFLL-----------EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYN 250
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
+++ + G D A+ ++ E+ GF+ N Y C +GR +EA L+ M+G
Sbjct: 251 VLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG 310
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG--FIPSCLSFDKMVEKLCENRDV 433
P T++ ++I A GR E+ L V + M F + S++ ++ +LC+ V
Sbjct: 311 DRAPSVVTYN-ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
+ L ++ + P E TY+ + +VQE + + K C + SV
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 429
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
I LCR G A + L M PD Y +I
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
L+ L+ P+ + +++ + L A+ + E MV SG P++ YT CK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSC 417
G + AM+L+ ME G T++ ++ G C GS L + L E ++ G P+
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS--LNQSLQFVERLMQKGLAPNA 211
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
++ ++E + R ++A L ++ KG P +Y++L+ G+ +G + + L+ E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+ K + + +++CLC G+ E+A L M P V Y +I S G
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 538 NARVLQLCNEMA 549
+ LQ+ EM+
Sbjct: 332 TEQALQVLKEMS 343
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 168/422 (39%), Gaps = 94/422 (22%)
Query: 98 NHGVRSYSIAIHVLVRA----GLITDARALLESLAAKNRDPGAV------------RAVT 141
+HG S ++ + LVR G + + +E L K P A R
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 142 DS--LIDAVGFVSGSHRPV-LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
++ L+D + G V ++L+ + K T+ A + + A+GF+ ++ S+N +L
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L R + M G P+ VT I+I++L G R AL +++ E +
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG---RTEQAL-QVLKEMSK 344
Query: 259 SSHS--PSAIVNSSLILRMVEKGH----------------------------LVEEEGKR 288
+H +A + +I R+ ++G L E K
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKV 404
Query: 289 ERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV 348
+ ++ +L + Q+ D Y ++ + R G+ +A ++ EM GF+P++
Sbjct: 405 QEAFYIIQSLSNK--QKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHT 460
Query: 349 YTSFTGGFCKEGRIDEAMELMRGME-GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
Y++ G C EG AME++ ME KP + F+ +I+G
Sbjct: 461 YSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILG----------------- 503
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
LC+ R + A +++K +P ETTY++L++G A + E
Sbjct: 504 -------------------LCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Query: 468 VQ 469
++
Sbjct: 545 LE 546
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 132/644 (20%), Positives = 262/644 (40%), Gaps = 113/644 (17%)
Query: 12 SRVSFHK---LHSHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLV 68
SR FH L P S + D S +RS D K L+
Sbjct: 34 SRKCFHTSRYLQQCVHRPDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEF 93
Query: 69 EQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLA 128
+++ E + + KTAL FF ++ + F+ +RSY + I +L+ A L++ AR +L L
Sbjct: 94 DRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLI 153
Query: 129 AKNRD--PGAVRAVTDSLIDAVG-----FVSGSHRPVLDLLVQTYAKMRLTEA---AFDV 178
N P +R ++ DA+ F R + DLL++ Y + A DV
Sbjct: 154 NGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDV 213
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK 238
+ +G S + N +L L R++ + ++ + +G + P+ I+A CK
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCK 272
Query: 239 EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI----------------LRMVEKGH-- 280
G ++ V ++ + + + +P+ + +++I +MVE+G
Sbjct: 273 GGKVEEAV----KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 281 -------LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
LV+ + +R+ +LK + ++ P+ + Y+ ++ + + GSL+ A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYF-VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGR-------------------------------- 361
+ MV G S Y + G+CK G+
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 362 ---IDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAG----------------------- 394
D A+ + M R + P G +I G C G
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 395 ----------SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+G+L+E + + +LG G + +S++ ++ C + +++A L ++
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
+G P TYS+LI G +V+E ++ + + + M P + ++ +I C+ + E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ +++ M S+ + P+ +Y +I ++ + G + L+L +M
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 206/472 (43%), Gaps = 53/472 (11%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFV-SGSHRPVL-- 159
+YSI + L RA I DA +L+ + K P + V ++LID+ F+ +GS +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI--VYNNLIDS--FIEAGSLNKAIEI 387
Query: 160 -DLLVQTYAKMRLTEAAFDV-----CCNVEAR------------GFRVSLASFNSVLHVL 201
DL+V + LT + ++ C N +A GF V+ SF SV+ +L
Sbjct: 388 KDLMVS--KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 202 QRSDRVSLVWD-----VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
L++D V E ++R + P L +I LCK G + ++ + + +
Sbjct: 446 CSH----LMFDSALRFVGEMLLRNMS-PGGGLLTTLISGLCKHGKHSKALELWFQFLNK- 499
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+++L+ + E G L E + K +L + V D V Y+
Sbjct: 500 ---GFVVDTRTSNALLHGLCEAGKLDE-----------AFRIQKEILGRGCVMDRVSYNT 545
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ LD A +EMV G +P+++ Y+ G +++EA++ + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
+ P T+ +I GC R EE F+ M+ P+ + ++ ++ C + + A
Sbjct: 606 MLPDVYTYSVMIDGCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
+ KG P TY+ LIKG + V+E L+ EM + + P + +T++I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ G++ E L+ M S+ + P+ Y MI + + GN +L NEM
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 169/413 (40%), Gaps = 38/413 (9%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
FN S++ I +L + A + + +N PG + +LI + G H
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG--GLLTTLISGLC-KHGKHS 487
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
L+L Q K GF V + N++LH L + ++ + + +
Sbjct: 488 KALELWFQFLNK-----------------GFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER-KRSSHSPSAIVNSSLILRM 275
++ + V+ +I C + L LD ++ K +++ S ++ +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
VE+ ++ KR ++PD YS+++ + + E ++
Sbjct: 591 VEEAIQFWDDCKR----------------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
EM+ +PN+ VY +C+ GR+ A+EL M+ +G+ P T+ +I G + S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
R+EE +FE M G P+ + +++ + + + L + K P + TY
Sbjct: 695 -RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK 508
+++I GYA G V E +L EM K + P + I + G + +A K
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 102/250 (40%), Gaps = 37/250 (14%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
L + + P ++++ + VR E ++ +V G P+ +++T+ FCK G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+ EE + +F M AG P+ ++F+
Sbjct: 276 V------------------------------------EEAVKLFSKMEEAGVAPNVVTFN 299
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+++ L ++A +++++G P TYS+L+KG + + + EM K
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
P + V+ ++I G L A + M S+ L+ + Y T+I + + G
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 542 LQLCNEMASL 551
+L EM S+
Sbjct: 420 ERLLKEMLSI 429
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 132/644 (20%), Positives = 262/644 (40%), Gaps = 113/644 (17%)
Query: 12 SRVSFHK---LHSHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLV 68
SR FH L P S + D S +RS D K L+
Sbjct: 34 SRKCFHTSRYLQQCVHRPDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEF 93
Query: 69 EQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLA 128
+++ E + + KTAL FF ++ + F+ +RSY + I +L+ A L++ AR +L L
Sbjct: 94 DRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLI 153
Query: 129 AKNRD--PGAVRAVTDSLIDAVG-----FVSGSHRPVLDLLVQTYAKMRLTEA---AFDV 178
N P +R ++ DA+ F R + DLL++ Y + A DV
Sbjct: 154 NGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDV 213
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK 238
+ +G S + N +L L R++ + ++ + +G + P+ I+A CK
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCK 272
Query: 239 EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI----------------LRMVEKGH-- 280
G ++ V ++ + + + +P+ + +++I +MVE+G
Sbjct: 273 GGKVEEAV----KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 281 -------LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
LV+ + +R+ +LK + ++ P+ + Y+ ++ + + GSL+ A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYF-VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGR-------------------------------- 361
+ MV G S Y + G+CK G+
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 362 ---IDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAG----------------------- 394
D A+ + M R + P G +I G C G
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 395 ----------SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+G+L+E + + +LG G + +S++ ++ C + +++A L ++
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
+G P TYS+LI G +V+E ++ + + + M P + ++ +I C+ + E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ +++ M S+ + P+ +Y +I ++ + G + L+L +M
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 206/472 (43%), Gaps = 53/472 (11%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFV-SGSHRPVL-- 159
+YSI + L RA I DA +L+ + K P + V ++LID+ F+ +GS +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI--VYNNLIDS--FIEAGSLNKAIEI 387
Query: 160 -DLLVQTYAKMRLTEAAFDV-----CCNVEAR------------GFRVSLASFNSVLHVL 201
DL+V + LT + ++ C N +A GF V+ SF SV+ +L
Sbjct: 388 KDLMVS--KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 202 QRSDRVSLVWD-----VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
L++D V E ++R + P L +I LCK G + ++ + + +
Sbjct: 446 CSH----LMFDSALRFVGEMLLRNMS-PGGGLLTTLISGLCKHGKHSKALELWFQFLNK- 499
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+++L+ + E G L E + K +L + V D V Y+
Sbjct: 500 ---GFVVDTRTSNALLHGLCEAGKLDE-----------AFRIQKEILGRGCVMDRVSYNT 545
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ LD A +EMV G +P+++ Y+ G +++EA++ + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
+ P T+ +I GC R EE F+ M+ P+ + ++ ++ C + + A
Sbjct: 606 MLPDVYTYSVMIDGCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
+ KG P TY+ LIKG + V+E L+ EM + + P + +T++I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ G++ E L+ M S+ + P+ Y MI + + GN +L NEM
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 169/413 (40%), Gaps = 38/413 (9%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
FN S++ I +L + A + + +N PG + +LI + G H
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG--GLLTTLISGLC-KHGKHS 487
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
L+L Q K GF V + N++LH L + ++ + + +
Sbjct: 488 KALELWFQFLNK-----------------GFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER-KRSSHSPSAIVNSSLILRM 275
++ + V+ +I C + L LD ++ K +++ S ++ +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
VE+ ++ KR ++PD YS+++ + + E ++
Sbjct: 591 VEEAIQFWDDCKR----------------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
EM+ +PN+ VY +C+ GR+ A+EL M+ +G+ P T+ +I G + S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
R+EE +FE M G P+ + +++ + + + L + K P + TY
Sbjct: 695 -RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK 508
+++I GYA G V E +L EM K + P + I + G + +A K
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 102/250 (40%), Gaps = 37/250 (14%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
L + + P ++++ + VR E ++ +V G P+ +++T+ FCK G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+ EE + +F M AG P+ ++F+
Sbjct: 276 V------------------------------------EEAVKLFSKMEEAGVAPNVVTFN 299
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+++ L ++A +++++G P TYS+L+KG + + + EM K
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
P + V+ ++I G L A + M S+ L+ + Y T+I + + G
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 542 LQLCNEMASL 551
+L EM S+
Sbjct: 420 ERLLKEMLSI 429
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 174/421 (41%), Gaps = 74/421 (17%)
Query: 169 MRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVT 228
++L E F + C +A +FN V+ L + DR++ + M+ P+ +T
Sbjct: 272 LQLLEEMFLMGCVPDAE-------TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 229 LKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEG-- 286
+++ LCK G + D RI P ++ ++LI V G L + +
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRI--------PKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 287 -----------------------KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+E + + + +L + + P+ Y+++V +
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
LG +D A + EM G +PN+ + FCKE RI EA+E+ R M +G KP T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 384 FDHVIIG-CAAGS---------------------------------GRLEECLGVFEAML 409
F+ +I G C G ++E + M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 410 GAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQ 469
G ++++ +++ LC +V++A + ++L G P + ++LI G G V+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 470 EVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
E ++ EM + P + F S+I LCR G++ED + +++ + PD + T++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 530 A 530
+
Sbjct: 677 S 677
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 201/487 (41%), Gaps = 56/487 (11%)
Query: 72 LLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
LLEL P + T++ F W+ + + H Y + I L G ++ L +
Sbjct: 84 LLEL--PLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKT----IDRLLIQM 137
Query: 132 RDPGAVRAVTDSLI-------DAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEA 184
+D G V +SL D GF + R +L++ Y+ E F
Sbjct: 138 KDEGIV--FKESLFISIMRDYDKAGFPGQTTRLMLEMR-NVYS----CEPTF-------- 182
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
S+N VL +L + + +V+ M+ + P T +++ A C
Sbjct: 183 -------KSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA----VN 231
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+D+ ++ + + P++++ +LI + K + V E + LL+ +
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLI-HSLSKCNRVNE----------ALQLLEEMFL 280
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
VPD+ ++ ++ + ++ A +M M++ GF P+ Y G CK GR+D
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA-GFIPSCLSFDKM 423
A +L R KP F+ +I G GRL++ V M+ + G +P +++ +
Sbjct: 341 AKDLFY----RIPKPEIVIFNTLIHGFVT-HGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+ + V A L + +KG P +Y++L+ G+ G++ E + EM +
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
P F +I C+ ++ +A + + M + PDV + ++I+ + L
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 544 LCNEMAS 550
L +M S
Sbjct: 516 LLRDMIS 522
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 139/301 (46%), Gaps = 18/301 (5%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+LV + K+ + A++V + A G + + FN ++ + R+ +++ M R
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ T +I LC+ ++ + L ++ E + + ++LI + +G
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVANTVTYNTLINAFLRRGE 544
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ E L+ ++ Q D + Y+ ++ R G +D A ++E+M+
Sbjct: 545 IKEAR-----------KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLE 399
G P++ G C+ G ++EA+E + M RG P TF+ +I G C AG R+E
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG--RIE 651
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ L +F + G P ++F+ ++ LC+ V A L ++ GF+P T+S+L+
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 460 K 460
+
Sbjct: 712 Q 712
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 153/339 (45%), Gaps = 20/339 (5%)
Query: 170 RLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTL 229
RL +A + V + G + ++NS+++ + V L +V M PN +
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 230 KIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRE 289
I++D CK G +D ++ E P+ + + LI K H + E
Sbjct: 428 TILVDGFCKLG----KIDEAYNVLNEMSADGLKPNTVGFNCLISAFC-KEHRIPE----- 477
Query: 290 RVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVY 349
V + + + ++ PD ++ ++ + + AL + +M+ G N+ Y
Sbjct: 478 -----AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 350 TSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE-TFDHVIIG-CAAGSGRLEECLGVFEA 407
+ F + G I EA +L+ M +G P E T++ +I G C AG +++ +FE
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAG--EVDKARSLFEK 589
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
ML G PS +S + ++ LC + VE+A ++ +G P T++ LI G G
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
+++ L ++ +++ + + P F +++ LC+ G + DA
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 159/394 (40%), Gaps = 35/394 (8%)
Query: 104 YSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLV 163
++ IH V G + DA+A+L + G V V + L+
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSY---GIVPDVC----------------TYNSLI 396
Query: 164 QTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY 223
Y K L A +V ++ +G + ++ S+ ++ + ++ ++V M
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN V +I A CKE + V+ I E R P +SLI + E +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVE----IFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ LL+ ++ + +V ++V Y+ +++A +R G + A ++ EMV G
Sbjct: 513 -----------ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
+ Y S G C+ G +D+A L M G P + + +I G SG +EE +
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR-SGMVEEAVE 620
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ M+ G P ++F+ ++ LC +E +L +G P T++ L+
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
G V + L E P ++ ++Q +
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 36/316 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SY+I + + G I +A +L ++A P + VGF +
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP-----------NTVGF---------N 463
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ + K A ++ + +G + + +FNS++ L D + + MI
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
N VT +I+A + G + +++ E I +SLI + G
Sbjct: 524 GVVANTVTYNTLINAFLRRG----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG- 578
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
E + R +L +++L+ P ++ +++++ R G ++ A+E +EMV+
Sbjct: 579 ----EVDKAR------SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G P+ + S G C+ GRI++ + + R ++ G+ P TF+ ++ G +
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 401 CLGVFEAMLGAGFIPS 416
CL + + + GF+P+
Sbjct: 689 CL-LLDEGIEDGFVPN 703
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 184/419 (43%), Gaps = 24/419 (5%)
Query: 122 ALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCN 181
A L+ L + A+RA D + + S V+ +++ K +A ++
Sbjct: 140 AFLKGLGFHKKFDLALRAF-DWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNG 198
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGL 241
++ GF + + S+ S++ S R +V++ M P +T ++++ K G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 242 LQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKR 301
+ +L M K +P A ++LI ++G L +E + + +
Sbjct: 259 PWNKITSLVEKM---KSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQ----------VFEE 304
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+ D V Y+ ++ + A+++ EMV++GF P+ Y S + ++G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+DEAMEL M +G KP T+ ++ G +G++E + +FE M AG P+ +F+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFER-AGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 422 KMVEKLCENRDVEQANANLTRLLDK----GFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+ K+ NR + ++ D+ G P T++ L+ + G EV ++ E
Sbjct: 424 AFI-KMYGNRG---KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
M+ P F ++I RCG E A + M +TPD++ Y T++A+ + G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/484 (19%), Positives = 184/484 (38%), Gaps = 74/484 (15%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP----- 157
+Y+ I R L +A + E + A V ++L+D G SHRP
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV--TYNALLDVYG---KSHRPKEAMK 335
Query: 158 ---------------VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
+ L+ YA+ + + A ++ + +G + + ++ ++L +
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
R+ +V ++E M PN T I G + D I S
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI----NVCGLS 451
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P + ++L+ + G E G + K + + VP+ ++ ++ A
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSG-----------VFKEMKRAGFVPERETFNTLISAYS 500
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
R GS + A+ +Y M+ +G P+ Y + + G +++ +++ ME KP
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 383 TFDHVIIGCAAG--------------SGRLE--------------------ECLGVFEAM 408
T+ ++ A G SG +E E F +
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 409 LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEV 468
GF P + + MV + V +AN L + ++GF P TY+ L+ ++ +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 469 QEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETM 528
+ ++ E+ K + P + + +VI CR ++ DA + M++ + PDV Y T
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 529 IASH 532
I S+
Sbjct: 741 IGSY 744
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 137/302 (45%), Gaps = 14/302 (4%)
Query: 248 ALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNL 307
A D M ++ S +++V ++I+ M+ GK RV+ + L +
Sbjct: 157 AFDWFMKQKDYQSMLDNSVV--AIIISML---------GKEGRVSS-AANMFNGLQEDGF 204
Query: 308 VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR-IDEAM 366
D Y+ ++ A G A+ ++++M G +P Y F K G ++
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L+ M+ G+ P T++ +I C GS +E VFE M AGF ++++ +++
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLH-QEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
++ ++A L ++ GF P TY+ LI YA G + E ++L +M K P
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+ +T+++ R GK+E A + M++ P++ + I + +G ++++ +
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 547 EM 548
E+
Sbjct: 444 EI 445
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 120/255 (47%), Gaps = 4/255 (1%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS-LDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V + K++ + P + Y++I++ ++G+ + + E+M G P+++ Y +
Sbjct: 228 VNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 355 GFCKEGRI-DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
CK G + EA ++ M+ G Y + + ++ S R +E + V M+ GF
Sbjct: 288 C-CKRGSLHQEAAQVFEEMKAAGFS-YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
PS ++++ ++ + +++A ++ +KG P TY+ L+ G+ G+V+ +
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
++ EM P + F + I+ GK + K + L+PD+ + T++A
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 534 QKGNNARVLQLCNEM 548
Q G ++ V + EM
Sbjct: 466 QNGMDSEVSGVFKEM 480
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 51/369 (13%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF +FN+++ R VY M+ P+ T ++ AL + G+ +++
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG------HLVEEE---GKRERVAVMVV 296
++++ E + P+ + SL L G H + EE G E AV++
Sbjct: 544 ----EKVLAEMEDGRCKPNELTYCSL-LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
TL+ + +L+P+ A + E+ GF P+ S +
Sbjct: 599 TLVLVCSKCDLLPE-------------------AERAFSELKERGFSPDITTLNSMVSIY 639
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVII--GCAAGSGRLEECLGVFEAMLGAGFI 414
+ + +A ++ M+ RG P T++ ++ +A G+ EE L +L G
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL---REILAKGIK 696
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P +S++ ++ C N + A+ + + + G +P TY+ I YAA +E + +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 475 YYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
M P + + S++ C+ + ++A+ +++ +++ L P H
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN--LDP-----------HAP 803
Query: 535 KGNNARVLQ 543
KG + R+L+
Sbjct: 804 KGEDLRLLE 812
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 213/487 (43%), Gaps = 41/487 (8%)
Query: 28 NSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSF 87
++N V+ V I + F R+ +AV + L+L+ L+ +VL + K A F
Sbjct: 125 STNPEEVERVCKVIDELFALDRNMEAVLDEM-KLDLSHDLIVEVLERFRHAR--KPAFRF 181
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
F W+A+ F H R+Y+ + +L + ++LE + K L+
Sbjct: 182 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG------------LLTM 229
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
F + ++ +A + + A + ++ F++ + + N +L L R+ ++
Sbjct: 230 ETFT---------IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KL 279
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
V ++ R PN +T ++++ C+ RN+ RI + P +
Sbjct: 280 GKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----VRNLIEAARIWNDMIDQGLKPDIVA 335
Query: 268 NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
++ ++ ++ R R + L + + P+ Y++++ + S+
Sbjct: 336 HNVMLEGLL-----------RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
++A+E +++MV SG +P++ VYT GF + ++D EL++ M+ +G P G+T++
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN-A 443
Query: 388 IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
+I A E ++ M+ PS +F+ +++ R+ E A ++ KG
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
P + +Y++LI+G +G+ +E + EM K M L + R G+ E E
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFE 563
Query: 508 KYLKTMK 514
+ + K
Sbjct: 564 ELAQRAK 570
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 3/192 (1%)
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEE 400
F PN YT G+C+ + EA + M +GLKP + H V++ S + +
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKP--DIVAHNVMLEGLLRSRKKSD 351
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ +F M G P+ S+ M+ C+ +E A ++D G P Y+ LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G+ + ++ V +L EM+ K P + ++I+ + E A + M + P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 521 DVAIYETMIASH 532
+ + ++ S+
Sbjct: 472 SIHTFNMIMKSY 483
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 36/242 (14%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GF +S Y S K + + + ++ M +GL ETF + AA R ++
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM-ETFTIAMKAFAAAKER-KK 247
Query: 401 CLGVFEAM----------------------------------LGAGFIPSCLSFDKMVEK 426
+G+FE M L F P+ +++ ++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C R++ +A ++D+G P ++++++G + + +KL++ M+ K CP
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+ +T +I+ C+ +E A +Y M L PD A+Y +I + V +L
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 547 EM 548
EM
Sbjct: 428 EM 429
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 161/392 (41%), Gaps = 22/392 (5%)
Query: 160 DLLVQTYAKMR-LTEAAFDV-CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
DL+V+ + R + AF C E +GF ++NS++ +L ++ + + V E M
Sbjct: 162 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 221
Query: 218 -IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
+G T+ + A KE ++ + +M + K + + +L +
Sbjct: 222 GTKGLLTMETFTIAMKAFAAAKE---RKKAVGIFELMKKYK----FKIGVETINCLLDSL 274
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
+ L GK +V L L++ P+ + Y+++++ R+ +L A ++ +
Sbjct: 275 GRAKL----GKEAQV-------LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 323
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M+ G +P+ + G + + +A++L M+ +G P ++ ++I
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT-IMIRDFCKQS 382
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+E + F+ M+ +G P + ++ + ++ L + +KG P TY+
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
LIK A + + ++Y +M + P + F +++ E + M +
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ PD Y +I +G + + EM
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 224/542 (41%), Gaps = 66/542 (12%)
Query: 43 DSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVR 102
DS + R W S +F L + +L+ +VL ++ + A FF+W + +
Sbjct: 65 DSNKPNRKWS--SHQFRLLLTDPNLLIRVLNMIR--VKPEIAFRFFNWIQRQSDVKQSRQ 120
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+++ + +L L+++A + A ++ D G + + D LID F +LDLL
Sbjct: 121 AFAAMLEILAENDLMSEAYLV----AERSIDLG-MHEIDDLLIDG-SFDKLIALKLLDLL 174
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ Y K + E + +GF S+ + N VL VL+ S ++ VYE MI
Sbjct: 175 LWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGI 234
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
P +T M+D+ K G L+R +D+I E KR + S + + LI + G +
Sbjct: 235 MPTVITFNTMLDSCFKAGDLER----VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKM- 289
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
EE +R + + ++ ++ + G D A + +EM+ +G
Sbjct: 290 -EEARR---------FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
P + Y + C GRID+A EL+ M + Y T H I G+ E
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN-TLMHGYIKM----GKFVEAS 394
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+F+ + PS ++++ +++ LCE+ ++E A + + P TY+ L+KG+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 463 AAKGEVQEVLKLYYEMEYKSM------------------------------------CPG 486
G + ++Y EM K + P
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
L+++ I LC+ G L A ++ + + L PD Y T+I + + G L +
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 547 EM 548
EM
Sbjct: 575 EM 576
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 210/502 (41%), Gaps = 59/502 (11%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
F VR+ +I + VL + ++ A A+ E++ P + ++++D+ F +G
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI--TFNTMLDSC-FKAGDLE 255
Query: 157 PVLDLLVQTYAK-MRLTEAAFDVCCN--------VEAR---------GFRVSLASFNSVL 198
V + ++ + + +E +++ N EAR GF V+ SFN ++
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI------ 252
+ W V + M+ YP T I I ALC G + + L +
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV 375
Query: 253 -----------MGERKRSSH----------SPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
MG+ +S PS + ++LI + E G+L EG +
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL---EGAQR-- 430
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
L + + Q + PD + Y+ +V V+ G+L A E+Y+EM+ G +P+ + YT+
Sbjct: 431 ------LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G + G D+A L M T +V I G L + + +
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G +P +++ ++ EN + A +L K P TY +LI G+A G +++
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+ EM+ + + P + +++ +C+ G +++A +YL M+ + P+ Y +I+
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 532 HEQKGNNARVLQLCNEMASLEL 553
+ V++L EM E+
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEI 686
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 50/330 (15%)
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ S+N+++H + + +++ + G +P+ VT +ID LC+ G N++
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG----NLEGAQ 429
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
R+ E P I ++L+ V+ G+L M + +L++ + PD
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS-----------MATEVYDEMLRKGIKPD 478
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE-PNSFVYTSFTGGFCKEGRIDEAMELM 369
Y+ ++RLG D A ++EEMV + P+ +Y G CK G + +A+E
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 370 RGMEGRGLKPYGETFDHVIIGCA----------------------------------AGS 395
R + GL P T+ VI G A +
Sbjct: 539 RKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKA 598
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
GRLE+ M G P+ ++ + ++ +C+ ++++A L ++ ++G P + +Y
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
++LI + +EV+KLY EM K + P
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 187 FRVSLA----SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLL 242
FRV L ++ +V+ + + + ++Y+ M+R R YP+ +T ++I K G L
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
++ + E K+ P+ + +++L+ M + G++ +E R L ++
Sbjct: 602 EQAF----QYSTEMKKRGVRPNVMTHNALLYGMCKAGNI--DEAYR---------YLCKM 646
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVY 349
++ + P+ Y++++ + +++Y+EM+ EP+ + +
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 207/474 (43%), Gaps = 37/474 (7%)
Query: 68 VEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVR----SYSIAIHVLVRAGLITDARAL 123
+ +VLL + +DA A++FF W +F+ G R +Y + +H+LV + A
Sbjct: 82 ISRVLLRFQ--SDASRAITFFKWV----KFDLGKRPNVGNYCLLLHILVSSKKFPLAMQF 135
Query: 124 L---ESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCC 180
L L +K + R + S D + V D+LV+ Y K+ L E F V
Sbjct: 136 LCELIELTSKKEEVDVFRVLV-SATDECNW----DPVVFDMLVKGYLKLGLVEEGFRVFR 190
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG 240
V GF VS+ + N +L+ L + D + W VY M R +PN T I+ + C +
Sbjct: 191 EVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDS 250
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
N +D + + + P + ++L+ +G L E L K
Sbjct: 251 ----NFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE-----------AFYLYK 295
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
+ ++ +VPD V Y+ ++ + G + A + + MV G +P+ Y + +CKEG
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 355
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG-VFEAMLGAGFIPSCLS 419
+ ++ +L+ M G + P T VI+ GRL + V E IP +
Sbjct: 356 MMQQSKKLLHEMLGNSVVPDRFTC-KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC 414
Query: 420 FDKMVEKLCENRDVEQANANLTRLL-DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
D ++ LC+ A L R++ ++G TY+ LI+ + ++E L L ++
Sbjct: 415 -DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
+ ++ + ++I CLCR G+ +AE + M + PD I ++ +
Sbjct: 474 KNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGY 527
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 322 VRLGSLDSALEMYEEMVMSGFEPN--SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ L S ++++ +V + E N V+ G+ K G ++E + R + G
Sbjct: 140 IELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSV 199
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T +H++ G +E+C V+ M G P+ +F+ + C + + + +
Sbjct: 200 SVVTCNHLLNG-LLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDF 258
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L ++ ++GF P TY+ L+ Y +G ++E LY M + + P L +TS+I+ LC+
Sbjct: 259 LEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCK 318
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G++ +A + M R + PD Y T+I ++ ++G + +L +EM
Sbjct: 319 DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
++ ++Y M G PN++ + T FC + E + + ME G +P T++
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYN- 275
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
++ GRL+E +++ M +P +++ +++ LC++ V +A+ R++D+
Sbjct: 276 TLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G P +Y+ LI Y +G +Q+ KL +EM S+ P +++ R G+L A
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
++ ++ + + + +I S Q+G
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLCQEG 425
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L+E K+E V V V L+ + N D V + ++V ++LG ++ ++ E++ S
Sbjct: 139 LIELTSKKEEVDVFRV-LVSATDECNW--DPVVFDMLVKGYLKLGLVEEGFRVFREVLDS 195
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GF + G K +++ ++ M G+ P TF+ ++ E
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFN-ILTNVFCNDSNFRE 254
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
E M GF P ++++ +V C +++A + + +P TY+ LIK
Sbjct: 255 VDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIK 314
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G G V+E + ++ M + + P + ++I C+ G ++ ++K L M + P
Sbjct: 315 GLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Query: 521 DVAIYETMIASHEQKG 536
D + ++ ++G
Sbjct: 375 DRFTCKVIVEGFVREG 390
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
RG + S+N++++ + + + M+ P+ T K++++ +EG R
Sbjct: 335 RGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG---R 391
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG----------HLVEEEG---KRERV 291
+ A++ ++ R+ P + + LI+ + ++G ++EEEG K E
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDF-LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETY 450
Query: 292 AVMVVTLLK------------RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
++ +L + +L QN V D+ Y ++ R+G A + EM
Sbjct: 451 NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFD 510
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMR--GMEGRGLKPYGETFDHVIIG-CAAGSG 396
S +P+SF+ + G+CKE D+A L+ ME R P E+++ ++ C G G
Sbjct: 511 SEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDP--ESYNSLVKAVCETGCG 568
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
++ L + E M GF+P+ L+ +++ L
Sbjct: 569 -YKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 219/508 (43%), Gaps = 45/508 (8%)
Query: 71 VLLELK-DPNDAKTALSFFHW---SAKTHRFNHGVRSYSIAIHVLVRAGLITDARALL-E 125
VLL L+ +PN +AL +F W S K F Y+IA HVL+R G+ A + E
Sbjct: 75 VLLSLESEPN---SALKYFRWAEISGKDPSF------YTIA-HVLIRNGMFDVADKVFDE 124
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEAR 185
+ + +D + ++ D +DA V L++ + + + A ++
Sbjct: 125 MITNRGKDFNVLGSIRDRSLDA---------DVCKFLMECCCRYGMVDKALEIFVYSTQL 175
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK-IMIDALCKEGLLQR 244
G + S +L+ L SDRV L+ D ++ + RG P+ V+ ++DAL +G + +
Sbjct: 176 GVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH----LVEEEGKRERVAVMVV---- 296
+D +M R V L + +E LV + G V
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 297 -----------TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
L K + Q+ + PD + YS ++ + G L +++ + + G + +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
V++S + K G + A + + M +G+ P T+ +I G GR+ E G++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ-DGRIYEAFGMY 414
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+L G PS +++ +++ C+ ++ A ++ G+ P Y +L+ G + +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
G + ++ +M +S+ + VF S+I CR + ++A K + M + PDVA +
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 526 ETMIASHEQKGNNARVLQLCNEMASLEL 553
T++ +G L L M + L
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 176/396 (44%), Gaps = 23/396 (5%)
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
+H VLD L + K +T+A D V RGFRV + S N VL L D++ + +
Sbjct: 219 AHGFVLDAL---FCKGEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRL 273
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
++ PN VT +I+ CK G + R D L ++M +R P I S+LI
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD-LFKVMEQR---GIEPDLIAYSTLID 329
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ G L M L + L + + D V +S + V+ G L +A +
Sbjct: 330 GYFKAGMLG-----------MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CA 392
Y+ M+ G PN YT G C++GRI EA + + RG++P T+ +I G C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
G+ L ++E M+ G+ P + + +V+ L + + A ++L +
Sbjct: 439 CGN--LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKT 512
++ LI G+ E LK++ M + P ++ FT+V++ G+LE+A
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 513 MKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
M L PD Y T+I + + LQL + M
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 169/397 (42%), Gaps = 51/397 (12%)
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
AF + + RG S+ +++S++ + + + +YE MI+ P+ V +++D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM 294
L K+GL+ + +++G+ R + +V +SLI E
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLN----VVVFNSLIDGWCRLNRFDE----------- 514
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
+ + + + + PD ++ ++ + G L+ AL ++ M G EP++ Y +
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 355 GFCKE-----------------------------------GRIDEAMELMRGMEGRGLKP 379
FCK RI++A + + ++P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T++ +I G + RL+E +FE + F P+ ++ ++ LC+N D++ A
Sbjct: 635 DIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ + +KG P TY L+ ++ +++ KL+ EM+ K + P + ++ +I LC+
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
G++++A L PDV Y +I + + G
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 147/364 (40%), Gaps = 51/364 (14%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
V + L+ + ++ + A V + G + +A+F +V+ V R+ ++ M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ P+A+ +IDA CK + D +M K S+ I ++++ ++
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD-LMQRNKISAD----IAVCNVVIHLLF 612
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
K H +E+ K L++ + PD V Y+ ++ L LD A ++E +
Sbjct: 613 KCHRIEDASK----------FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
++ F PN+ T CK +D A+ + M +G KP T+ GC
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY-----GC------ 711
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
+++ ++ D+E + + +KG P +YS+
Sbjct: 712 -------------------------LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+I G +G V E ++++ + P + + +I+ C+ G+L +A + M
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 518 LTPD 521
+ PD
Sbjct: 807 VKPD 810
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ 164
++ IH+L + I DA +L +P V T ++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT--------------------MIC 644
Query: 165 TYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP 224
Y +R + A + ++ F + + ++HVL +++ + ++ M + P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
NAVT ++D K +++ ++ E + SPS + S +I + ++G + E
Sbjct: 705 NAVTYGCLMDWFSK----SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE- 759
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
+ + + L+PD V Y++++ ++G L A +YE M+ +G +P
Sbjct: 760 ----------ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 345 NSFV 348
+ +
Sbjct: 810 DDLL 813
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 192/444 (43%), Gaps = 44/444 (9%)
Query: 115 GLITDA---RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRL 171
GL+ D + + +L + + A R +D +D + + +L+++ + K+ L
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 172 TEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
E A + ++ SL S+N L L R + V + M P+ + I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
++D LCK G+L DA I+G KR+ P A+ L+ H GK +
Sbjct: 367 LMDGLCKLGMLS---DA-KTIVGLMKRNGVCPDAVTYGCLL-------HGYCSVGKVDAA 415
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
+LL+ +++ N +P++ ++++H+ ++G + A E+ +M G+ ++
Sbjct: 416 K----SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGE-----------------------TFDHVI 388
G C G +D+A+E+++GM G G T+ ++
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 389 IG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
G C AG R E +F M+G P ++++ + C+ + A L + KG
Sbjct: 532 NGLCKAG--RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
TY+ LI G K ++ E+ L EM+ K + P + + + IQ LC K+EDA
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 508 KYLKTMKSRLLTPDVAIYETMIAS 531
L M + + P+V ++ +I +
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEA 673
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
+L+ E +ER V L K ++ + P + ++L++ A +D+A E+++EM
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
G +PN F + G+CK G D+ +EL+ ME G+ P + + I+ GR +
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLP-NKVIYNTIVSSFCREGRND 234
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL----PGETTY 455
+ + E M G +P ++F+ + LC+ V A+ + + +L P TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
+L++KG+ G +++ L+ + L + +Q L R GK +AE LK M
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 516 RLLTPDVAIYETMI 529
+ + P + Y ++
Sbjct: 355 KGIGPSIYSYNILM 368
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 158/371 (42%), Gaps = 31/371 (8%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
++SY+I + LVR G +A +L+ + K P +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS--------------------YN 365
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ K+ + A + ++ G ++ +LH +V + + M+R
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS------AIVNSSLILR 274
PNA T I++ +L K G + + L R M E+ + + + S + +
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISE-AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 275 MVE--KGHLVEEEGKRERVAVMVVTLL-KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL 331
+E KG V + + L+ L++ N +PD + YS +++ + G A
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 332 EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGC 391
++ EM+ +P+S Y F FCK+G+I A +++ ME +G ET++ +I+G
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Query: 392 AAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG 451
++ E G+ + M G P+ +++ ++ LCE VE A L ++ K P
Sbjct: 605 GI-KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 452 ETTYSLLIKGY 462
++ LI+ +
Sbjct: 664 VFSFKYLIEAF 674
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 208/505 (41%), Gaps = 92/505 (18%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDP----------GAVRA-VTDS---LIDAV 148
++++ I L + + AR L + + K P G +A +TD L++A+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 149 -GFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
F ++ + + +V ++ + + + + + G + +FNS + L + +V
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 208 SLVWDVYEHM----IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
++ M G PN++T +M+ CK GLL+ DA + + E R +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE---DA--KTLFESIRENDDL 323
Query: 264 SAIVNSSLILR-MVEKGHLVEEEGKRERV---------------------------AVMV 295
+++ + ++ L+ +V G +E E +++ A +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V L+KR + PD+V Y ++H +G +D+A + +EM+ + PN++
Sbjct: 384 VGLMKR---NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYG-ETFD-HVIIGCAAGSGRLEECLGVFEAM----- 408
K GRI EA EL+R M +G YG +T ++I+ GSG L++ + + + M
Sbjct: 441 LWKMGRISEAEELLRKMNEKG---YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 409 -----LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
LG +I L D ++E C LP TYS L+ G
Sbjct: 498 AALGNLGNSYIG--LVDDSLIENNC--------------------LPDLITYSTLLNGLC 535
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G E L+ EM + + P + I C+ GK+ A + LK M+ + +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y ++I K + L +EM
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEM 620
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 168/394 (42%), Gaps = 24/394 (6%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEAR--GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
+V +AK + AF V +R + S+ +N +L + RV V +Y+ M+
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
P T ++I ALC VDA + E P+ L+ + G
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSC----VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
+ ++G + LL + ++P+ V Y+ IV + R G D + +M E+M
Sbjct: 197 --LTDKG---------LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE 245
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME---GRGL-KPYGETFDHVIIG-CAAG 394
G P+ + S CKEG++ +A + ME GL +P T++ ++ G C G
Sbjct: 246 EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Query: 395 SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT 454
LE+ +FE++ + S S++ ++ L + +A L ++ DKG P +
Sbjct: 306 --LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 455 YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
Y++L+ G G + + + M+ +CP + ++ C GK++ A+ L+ M
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 515 SRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
P+ ++ S + G + +L +M
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 356 FCKEGRIDEAMELMRGMEGRGL--KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
F K ID+A + + R KP ++ ++ C R+E +++ M+ G
Sbjct: 85 FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIK-ERRVEFVSWLYKDMVLCGI 143
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P +F+ ++ LC++ V+ A + +KG P E T+ +L++GY G + L+
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L ME + P ++ +++ CR G+ +D+EK ++ M+ L PD+ + + I++
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 534 QKGNNARVLQLCNEMASLEL 553
++G +VL + +EL
Sbjct: 264 KEG---KVLDASRIFSDMEL 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 42/380 (11%)
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ 164
+I +H L + G I++A LL + K + VT ++I V + GS LD ++
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGY---GLDTVTCNII--VDGLCGSGE--LDKAIE 487
Query: 165 TYAKMRL-TEAAFDVCCN----------VEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
MR+ AA N +E L +++++L+ L ++ R + ++
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP-DLITYSTLLNGLCKAGRFAEAKNL 546
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
+ M+ + P++V I I CK+G + + R++ + ++ S +SLIL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQG----KISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ K + E G L+ + ++ + P+ Y+ + ++ A +
Sbjct: 603 GLGIKNQIFEIHG-----------LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR---GMEGRGLKPYGETFDHVIIG 390
+EM+ PN F + FCK D A E+ + G+ Y F+ ++
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL-- 709
Query: 391 CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLP 450
+G+L + + EA+L GF + +VE LC+ ++E A+ L +++D+G+
Sbjct: 710 ---AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 451 GETTYSLLIKGYAAKGEVQE 470
+I G G +E
Sbjct: 767 DPAALMPVIDGLGKMGNKKE 786
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+YS ++ L +AG +A+ L + + P D+V + ++
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP-----------DSVAY---------NIF 565
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ + K +AF V ++E +G SL ++NS++ L +++ + + + M
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
PN T I LC+ ++ + LD +M + + +P+ LI + V
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMM----QKNIAPNVFSFKYLIEAFCK----V 677
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
+ + V V++ + ++ L YSL+ + + G L A E+ E ++ GF
Sbjct: 678 PDFDMAQEVFETAVSICGQ--KEGL------YSLMFNELLAAGQLLKATELLEAVLDRGF 729
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
E +F+Y CK+ ++ A ++ M RG
Sbjct: 730 ELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 202/472 (42%), Gaps = 77/472 (16%)
Query: 71 VLLELK-DPNDAKTALSFFHW---SAKTHRFNHGVRSYSIAIHVLVRAGLITDARALL-E 125
VLL L+ +PN +AL +F W S K F Y+IA HVL+R G+ A + E
Sbjct: 75 VLLSLESEPN---SALKYFRWAEISGKDPSF------YTIA-HVLIRNGMFDVADKVFDE 124
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEAR 185
+ + +D + ++ D +DA V L++ + + + A ++
Sbjct: 125 MITNRGKDFNVLGSIRDRSLDA---------DVCKFLMECCCRYGMVDKALEIFVYSTQL 175
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK-IMIDALCKEGLLQR 244
G + S +L+ L SDRV L+ D ++ + RG P+ V+ ++DAL +G + +
Sbjct: 176 GVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+D R++ ER IV+ + +L KG V++ + + RLL
Sbjct: 236 ALD-FHRLVMERGFRV----GIVSCNKVL----KGLSVDQ-----------IEVASRLL- 274
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+LV D G PN + + GFCK G +D
Sbjct: 275 -SLVLDC-----------------------------GPAPNVVTFCTLINGFCKRGEMDR 304
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
A +L + ME RG++P + +I G +G L +F L G + F +
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDG-YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ ++ D+ A+ R+L +G P TY++LIKG G + E +Y ++ + M
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
P + ++S+I C+CG L + M PDV IY ++ ++G
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 174/421 (41%), Gaps = 64/421 (15%)
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
+H VLD L + K +T+A D V RGFRV + S N VL L D++ + +
Sbjct: 219 AHGFVLDAL---FCKGEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRL 273
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
++ PN VT +I+ CK G + R D L ++M +R P I S+LI
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD-LFKVMEQR---GIEPDLIAYSTLID 329
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ G L M L + L + + D V +S + V+ G L +A +
Sbjct: 330 GYFKAGMLG-----------MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CA 392
Y+ M+ G PN YT G C++GRI EA + + RG++P T+ +I G C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
G+ L ++E M+ G+ P + + +V+ L + + A ++L +
Sbjct: 439 CGN--LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV------------------- 493
++ LI G+ E LK++ M + P ++ FT+V
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 494 ----------------------IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
I L +C ++EDA K+ + + PD+ Y TMI
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 532 H 532
+
Sbjct: 617 Y 617
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 70/417 (16%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
+G ++ + F+S + V +S ++ VY+ M+ PN VT I+I LC++G R
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG---R 406
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV------------A 292
+A + G+ + PS + SSLI + G+L E +
Sbjct: 407 IYEAFG-MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 293 VMVVTLLK------------RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
V+V L K ++L Q++ + V ++ ++ RL D AL+++ M +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 341 GFEPNSFVYTS------FTGGFCKE----------------------------------- 359
G +P+ +T+ FCK
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
RI++A + + ++P T++ +I G + RL+E +FE + F P+ ++
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVT 644
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ LC+N D++ A + + +KG P TY L+ ++ +++ KL+ EM+
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
K + P + ++ +I LC+ G++++A L PDV Y +I + + G
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 168/377 (44%), Gaps = 35/377 (9%)
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
AF + + RG S+ +++S++ + + + +YE MI+ P+ V +++D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI-----LRMVEKG----HLVEEE 285
L K+GL+ + +++G+ R + +V +SLI L ++ L+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLN----VVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 286 GKRERVA----VMVVTLLKR----------------LLQQNLVPDSVGY-SLIVHAKVRL 324
G + VA VM V++++ L+Q+N + + ++++H +
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
++ A + + ++ EP+ Y + G+C R+DEA + ++ P T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
++I + ++ + +F M G P+ +++ +++ ++ D+E + +
Sbjct: 646 T-ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
+KG P +YS++I G +G V E ++++ + P + + +I+ C+ G+L
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 505 DAEKYLKTMKSRLLTPD 521
+A + M + PD
Sbjct: 765 EAALLYEHMLRNGVKPD 781
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 162/400 (40%), Gaps = 56/400 (14%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV--------GF-- 150
V +Y+I I L + G I +A + + + +P V SLID GF
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV--TYSSLIDGFCKCGNLRSGFAL 448
Query: 151 ----VSGSHRP---VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
+ + P + +LV +K L A + + R+++ FNS++ R
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 204 SDRVSLVWDVYEHM-IRG-----RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERK 257
+R V+ M I G + + + IM DA CK + D +M K
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD-LMQRNK 567
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEE---------EGKRERVAVMVVTL------LKRL 302
S+ I ++++ ++ K H +E+ EGK E V T+ L+RL
Sbjct: 568 ISAD----IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 303 LQQNLV----------PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+ + P++V ++++H + +D A+ M+ M G +PN+ Y
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
F K I+ + +L M+ +G+ P ++ +I G GR++E +F + A
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK-RGRVDEATNIFHQAIDAK 742
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
+P +++ ++ C+ + +A +L G P +
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 323 RLGSLDSALEMYEEMVMSGFE-PNSFVY---TSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
R G +D ALE++ G P VY S G + D +L RG G++
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG----GIE 213
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
P G + ++ G + + L ++ GF +S +K+++ L ++ +E A+
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASR 272
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L+ +LD G P T+ LI G+ +GE+ L+ ME + + P L ++++I
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA 539
+ G L K + + DV ++ + I + + G+ A
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ 164
++ IH+L + I DA +L +P V T ++
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT--------------------MIC 615
Query: 165 TYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP 224
Y +R + A + ++ F + + ++HVL +++ + ++ M + P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
NAVT ++D K +++ ++ E + SPS + S +I + ++G + E
Sbjct: 676 NAVTYGCLMDWFSK----SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE- 730
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
+ + + L+PD V Y++++ ++G L A +YE M+ +G +P
Sbjct: 731 ----------ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 345 NSFV 348
+ +
Sbjct: 781 DDLL 784
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 215/490 (43%), Gaps = 47/490 (9%)
Query: 28 NSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSF 87
++N V+ V I + F R+ +AV + L+L+ L+ +VL + K A F
Sbjct: 125 STNPEEVERVCKVIDELFALDRNMEAVLDEM-KLDLSHDLIVEVLERFRHAR--KPAFRF 181
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
F W+A+ F H R+Y+ + +L + ++LE + K L+
Sbjct: 182 FCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG------------LLTM 229
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
F + ++ +A + + A + ++ F++ + + N +L L R+ ++
Sbjct: 230 ETFT---------IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KL 279
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
V ++ R PN +T ++++ C+ RN+ RI + P +
Sbjct: 280 GKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----VRNLIEAARIWNDMIDHGLKPDIVA 335
Query: 268 NSSLI---LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
++ ++ LR ++K + L + + P+ Y++++ +
Sbjct: 336 HNVMLEGLLRSMKKSD--------------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 381
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
S+++A+E +++MV SG +P++ VYT GF + ++D EL++ M+ +G P G+T+
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I A E ++ M+ PS +F+ +++ R+ E A ++
Sbjct: 442 N-ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 500
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
KG P + +Y++LI+G ++G+ +E + EM K M L + R G+ E
Sbjct: 501 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Query: 505 DAEKYLKTMK 514
E+ + K
Sbjct: 561 IFEELAQRAK 570
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEE 400
F PN YT G+C+ + EA + M GLKP + H V++ S + +
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP--DIVAHNVMLEGLLRSMKKSD 351
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ +F M G P+ S+ M+ C+ +E A ++D G P Y+ LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G+ + ++ V +L EM+ K P + ++I+ + E + M + P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 521 DVAIYETMIASH 532
+ + ++ S+
Sbjct: 472 SIHTFNMIMKSY 483
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GF S Y S K + + + ++ M +GL ETF + AA R ++
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM-ETFTIAMKAFAAAKER-KK 247
Query: 401 CLGVFEAM----------------------------------LGAGFIPSCLSFDKMVEK 426
+G+FE M L F P+ +++ ++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C R++ +A ++D G P ++++++G + + +KL++ M+ K CP
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+ +T +I+ C+ +E A +Y M L PD A+Y +I + V +L
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 547 EM 548
EM
Sbjct: 428 EM 429
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 161/392 (41%), Gaps = 22/392 (5%)
Query: 160 DLLVQTYAKMR-LTEAAFDV-CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
DL+V+ + R + AF C E +GF + ++NS++ +L ++ + + V E M
Sbjct: 162 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM 221
Query: 218 -IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
+G T+ + A KE ++ + +M + K + + +L +
Sbjct: 222 GTKGLLTMETFTIAMKAFAAAKE---RKKAVGIFELMKKYKFKI----GVETINCLLDSL 274
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
+ L GK +V L L++ P+ + Y+++++ R+ +L A ++ +
Sbjct: 275 GRAKL----GKEAQV-------LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 323
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M+ G +P+ + G + + +A++L M+ +G P ++ ++I
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT-IMIRDFCKQS 382
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+E + F+ M+ +G P + ++ + ++ L + +KG P TY+
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
LIK A + + ++Y +M + P + F +++ E M +
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ PD Y +I +G + + EM
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 167/355 (47%), Gaps = 28/355 (7%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR---GRNYPNAVTLKIMIDALCKEGLL 242
GF +S + F+SV++ L ++ + W + +R G N +A T ++I + G++
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMV 189
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE--------KGHLVEEEGKRERVAVM 294
Q+ + A + + S + S+ LR++E +GH+ R A M
Sbjct: 190 QQAIRAFE--------FARSYEPVCKSATELRLLEVLLDALCKEGHV--------REASM 233
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
+ + + N VP ++++++ R L A +++EEM +P Y +
Sbjct: 234 YLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIE 293
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
G+C+ R+ AME++ M+ ++ F+ +I G +GRL E LG+ E
Sbjct: 294 GYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE-AGRLSEALGMMERFFVCESG 352
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P+ ++++ +V+ C+ D+ A+ L ++ +G P TTY+ K ++ + +E + L
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 475 YYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
Y+++ P + +++ LC GKL A + K MK+R + PD+ +I
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 194/449 (43%), Gaps = 47/449 (10%)
Query: 130 KNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRV 189
+N D + V +SL + GF+ + L ++KM++ + F V V +
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSP 161
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
++ ++++ + +S + L + M R PN VT +ID CK G L+ V
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS-- 219
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
+ E +R S + + ++LI +KG + E + R+++ + P
Sbjct: 220 --LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE-----------EMYSRMVEDRVEP 266
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+S+ Y+ I+ + G D+A++ +M+ G + Y G C G++ EA E++
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
ME L P F ++ SGR++ + ++ ++ GF P ++ M++ + +
Sbjct: 327 EDMEKSDLVPDMVIFT-TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 430 NRD---------VEQAN-----------------ANLTRLLDK----GFLPGETTYSLLI 459
N +E+AN + RL K G +P + Y+ I
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G +G + + KL M + + L +T++I L G + +A + M + ++
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEM 548
PD A+++ +I ++E++GN A L +M
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 25/373 (6%)
Query: 184 ARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQ 243
+RG+ +SFNSV+ + + +V D+ M R P+ ++ +ID C+ G ++
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 244 RNVDALDRIMGERKRSSHS---PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
L+ + R+SH IV+ + + K +++E V V + +LK
Sbjct: 109 SASLVLESL-----RASHGFICKPDIVSFNSLFNGFSKMKMLDE------VFVYMGVMLK 157
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
P+ V YS + + G L AL+ + M PN +T G+CK G
Sbjct: 158 -----CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAG 212
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGS-GRLEECLGVFEAMLGAGFIPSCL 418
++ A+ L + M + T+ +I G C G R EE ++ M+ P+ L
Sbjct: 213 DLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE---MYSRMVEDRVEPNSL 269
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+ +++ + D + A L ++L++G T Y ++I G G+++E ++ +M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN- 537
E + P + +FT+++ + G+++ A + R PDV TMI + G
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 538 NARVLQLCNEMAS 550
+ ++ C E A+
Sbjct: 390 HEAIVYFCIEKAN 402
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 163/358 (45%), Gaps = 34/358 (9%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
++ +F ++ ++ + + +Y+ M R R N VT +ID CK+G +QR +
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKG----------HLVEEEGKRERVAVMVVT-- 297
R++ +R P+++V +++I ++G ++ + + + A V+
Sbjct: 257 SRMVEDRVE----PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 298 ------------LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
+++ + + +LVPD V ++ +++A + G + +A+ MY +++ GFEP+
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
++ G K G++ EA+ ++ + V+I G E +F
Sbjct: 373 VVALSTMIDGIAKNGQLHEAIVYF------CIEKANDVMYTVLIDALCKEGDFIEVERLF 426
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+ AG +P + + LC+ ++ A TR++ +G L Y+ LI G A+K
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G + E +++ EM + P +VF +I+ + G + A L M+ R L V+
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS-GF--EPNSFVYTSFTGGFCKEGRIDEA 365
PD + Y+ ++ R G + SA + E + S GF +P+ + S GF K +DE
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
M G+ + P T+ I SG L+ L F +M P+ ++F +++
Sbjct: 149 FVYM-GVMLKCCSPNVVTYS-TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C+ D+E A + + TY+ LI G+ KGE+Q ++Y M + P
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
V+T++I + G ++A K+L M ++ + D+ Y +I+ G ++
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 546 NEMASLEL 553
+M +L
Sbjct: 327 EDMEKSDL 334
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 211/480 (43%), Gaps = 47/480 (9%)
Query: 28 NSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSF 87
++N V+ V I + F R+ +AV + L+L+ L+ +VL + K A F
Sbjct: 124 STNPEEVERVCKVIDELFALDRNMEAVLDEM-KLDLSHDLIVEVLERFRHAR--KPAFRF 180
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
F W+A+ F H R+Y+ + +L + ++LE + K L+
Sbjct: 181 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG------------LLTM 228
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
F + ++ +A + + A + ++ F++ + + N +L L R+ ++
Sbjct: 229 ETFT---------IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KL 278
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
V ++ R PN +T ++++ C+ RN+ RI + P +
Sbjct: 279 GKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----VRNLIEAARIWNDMIDHGLKPDIVA 334
Query: 268 NSSLI---LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
++ ++ LR ++K + L + + P+ Y++++ +
Sbjct: 335 HNVMLEGLLRSMKKSD--------------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 380
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
S+++A+E +++MV SG +P++ VYT GF + ++D EL++ M+ +G P G+T+
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I A E ++ M+ PS +F+ +++ R+ E A ++
Sbjct: 441 N-ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 499
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
KG P + +Y++LI+G ++G+ +E + EM K M L + R G+ E
Sbjct: 500 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 559
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEE 400
F PN YT G+C+ + EA + M GLKP + H V++ S + +
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKP--DIVAHNVMLEGLLRSMKKSD 350
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ +F M G P+ S+ M+ C+ +E A ++D G P Y+ LI
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G+ + ++ V +L EM+ K P + ++I+ + E + M + P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 521 DVAIYETMIASH 532
+ + ++ S+
Sbjct: 471 SIHTFNMIMKSY 482
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 36/242 (14%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GF +S Y S K + + + ++ M +GL ETF + AA R ++
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM-ETFTIAMKAFAAAKER-KK 246
Query: 401 CLGVFEAM----------------------------------LGAGFIPSCLSFDKMVEK 426
+G+FE M L F P+ +++ ++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 306
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C R++ +A ++D G P ++++++G + + +KL++ M+ K CP
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+ +T +I+ C+ +E A +Y M L PD A+Y +I + V +L
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 547 EM 548
EM
Sbjct: 427 EM 428
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 160/392 (40%), Gaps = 22/392 (5%)
Query: 160 DLLVQTYAKMR-LTEAAFDV-CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
DL+V+ + R + AF C E +GF ++NS++ +L ++ + + V E M
Sbjct: 161 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 220
Query: 218 -IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
+G T+ + A KE ++ + +M + K + + +L +
Sbjct: 221 GTKGLLTMETFTIAMKAFAAAKE---RKKAVGIFELMKKYKFKI----GVETINCLLDSL 273
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
+ L GK +V L L++ P+ + Y+++++ R+ +L A ++ +
Sbjct: 274 GRAKL----GKEAQV-------LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 322
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M+ G +P+ + G + + +A++L M+ +G P ++ ++I
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT-IMIRDFCKQS 381
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+E + F+ M+ +G P + ++ + ++ L + +KG P TY+
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
LIK A + + ++Y +M + P + F +++ E M +
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ PD Y +I +G + + EM
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 206/495 (41%), Gaps = 81/495 (16%)
Query: 59 GSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLIT 118
S++L+ +L+E+VL +L N ALS F W+ F H +Y+
Sbjct: 88 ASVKLSPALIEEVLKKL--SNAGVLALSVFKWAENQKGFKHTTSNYN------------- 132
Query: 119 DARALLESLAAKNRDPGAVRA--VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAF 176
AL+ESL G ++ + SL+D + + L+ + YA+ R + A
Sbjct: 133 ---ALIESL-------GKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAI 182
Query: 177 DVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDAL 236
+E GF++ + FN +L L +S V V++ M + R P+ + I+++
Sbjct: 183 GAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW 242
Query: 237 CKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
+E L R VD ++R M ++EG
Sbjct: 243 GQELNLLR-VDEVNREM-----------------------------KDEG---------- 262
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
PD V Y +I++A + + A+ + EM +P+ ++ S G
Sbjct: 263 ----------FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
E ++++A+E + G T++ ++G S R+E+ + M G P+
Sbjct: 313 GSEKKLNDALEFFERSKSSGFPLEAPTYN-ALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++D ++ L + ++A + P +TY ++++ + K + +K++
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
EM+ K + PG+ +F+S+I LC KL++A +Y M + P ++ + + +G
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Query: 537 NNARVLQLCNEMASL 551
+V L +M L
Sbjct: 489 RKDKVTDLVVKMDRL 503
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 164/393 (41%), Gaps = 65/393 (16%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIM 232
E AF V + +GF ++++ VL+ L + ++ L + ++E M RG + T IM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 233 IDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
+D+ CK GL+ E+ ++
Sbjct: 525 VDSFCKAGLI-----------------------------------------EQARK---- 539
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+ + P+ V Y+ ++HA ++ + A E++E M+ G PN Y++
Sbjct: 540 -----WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKP----YGETFDH-----------VIIGCAAGSGR 397
G CK G++++A ++ M G P Y + +D ++ S R
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
+EE + +AM G P+ + +D +++ LC+ +++A T + + GF TYS
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
LI Y K+ +M S P + ++T +I LC+ GK ++A K ++ M+ +
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
P+V Y MI G L+L M S
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/579 (20%), Positives = 233/579 (40%), Gaps = 84/579 (14%)
Query: 12 SRVSFHKLHSHTAFP----RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSL 67
S V + ++ H P + + A+ D + + D F R+ R+F +L++SL
Sbjct: 78 SLVDYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQ--KFLRQFRE-KLSESL 134
Query: 68 VEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESL 127
V +VL + P+ +SFF W+ + + H Y+ + ++VR D + E
Sbjct: 135 VIEVLRLIARPS---AVISFFVWAGRQIGYKHTAPVYNALVDLIVR----DDDEKVPEEF 187
Query: 128 AAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGF 187
+ RD + G L++LV+ + + A + ++ F
Sbjct: 188 LQQIRDDDK---------EVFG-------EFLNVLVRKHCRNGSFSIALEELGRLKDFRF 231
Query: 188 RVSLASFNSVLHVLQRSDRV---SLV----------------------------WDVYEH 216
R S +++N ++ ++DR+ SL+ W
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 217 MIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRM 275
++ N+ P+ V +I LC+ L + +D L+R+ + +S P+ + S+L+
Sbjct: 292 LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM----RATSCLPNVVTYSTLLCGC 347
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
+ K L G+ +RV L ++ + P ++ +VHA G A ++ +
Sbjct: 348 LNKKQL----GRCKRV-------LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 336 EMVMSGFEPNSFVYTSFTGGFC--KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG--- 390
+MV G P VY G C K+ + ++L L G + + +
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA-GVVLNKINVSSFT 455
Query: 391 -CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL 449
C +G+ E+ V M+G GFIP ++ K++ LC +E A + G +
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKY 509
TY++++ + G +++ K + EM P + +T++I + K+ A +
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 510 LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+TM S P++ Y +I H + G + Q+ M
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 195/458 (42%), Gaps = 30/458 (6%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +Y+ IH ++A ++ A L E++ ++ P V +LID G ++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV--TYSALID--GHCKAGQ---VE 605
Query: 161 LLVQTYAKMRLTEAAFDVCC---NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
Q + +M ++ DV + R ++ ++ ++L +S RV + + M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
PN + +ID LCK G L D + E + SSLI R +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKL----DEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
KR+ +A V L ++L+ + P+ V Y+ ++ ++G D A ++ + M
Sbjct: 722 V--------KRQDLASKV---LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
G +PN YT+ GF G+I+ +EL+ M +G+ P T+ V+I +G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY-RVLIDHCCKNGA 829
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
L+ + E M + + K++E N++ ++ L + P + Y L
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 887
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKS--MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
LI ++ L+L E+ S + S + S+I+ LC K+E A + M
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947
Query: 516 RLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+ + P++ + ++I + + L L + ++ +E+
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 154/327 (47%), Gaps = 18/327 (5%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
RG + L ++ +V++ L + L ++ M + N V +ID+LCK R
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK----YR 267
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+ D + E + P+ I SSLI + G + LL +++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS-----------RLLSDMIE 316
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ + P+ V +S ++ A V+ G L A ++YEEM+ +PN F Y+S GFC R+ E
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A +++ M + P T++ +I G C A R+++ + +F M G + + +++ +
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAK--RVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+ + RD + A +++ G P TY++L+ G G++ + + ++ ++ +M
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYL 510
P + + +I+ +C+ GK + Y
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 167/368 (45%), Gaps = 19/368 (5%)
Query: 183 EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM-IRGRNYPNAVTLKIMIDALCKEGL 241
++R F S+ F+ +L + + ++ LV E M I G ++ N T I+I+ C+
Sbjct: 71 QSRPFP-SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISH-NLYTYNILINCFCRCSR 128
Query: 242 LQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKR 301
L + L ++M + + P + +SL+ + + V L+ +
Sbjct: 129 LSLALALLGKMM----KLGYEPDIVTLNSLLNGFCHGNRISD-----------AVALVDQ 173
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+++ PD+V ++ ++H A+ + + MV G +P+ Y + G CK G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
D A+ L+ ME ++ + VI ++ L +F M G P+ +++
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGVRPNVITYS 292
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ LC A+ L+ ++++ P T+S LI + KG++ + KLY EM +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
S+ P + ++S+I C +L +A++ L+ M + P+V Y T+I + +
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 542 LQLCNEMA 549
++L EM+
Sbjct: 413 MELFREMS 420
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 171/401 (42%), Gaps = 29/401 (7%)
Query: 144 LIDAVGF--VSGSHRPVLDL-----LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
L DA+G V RP + L+ AKM + +E G +L ++N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
+++ R R+SL + M++ P+ VTL +++ C + V +D+++
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV--- 175
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ P + ++LI G + + V L+ R++Q+ PD V Y
Sbjct: 176 -EMGYKPDTVTFTTLI-----HGLFLHNKASE------AVALIDRMVQRGCQPDLVTYGA 223
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+V+ + G D AL + +M + E N +Y++ CK D+A+ L ME +G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
++P T+ +I C GR + + M+ P+ ++F +++ + + +A
Sbjct: 284 VRPNVITYSS-LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAA---KGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
++ + P TYS LI G+ GE +++L+L M K P + + ++
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL---MIRKDCLPNVVTYNTL 399
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
I C+ +++ + + M R L + Y T+I Q
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 35/368 (9%)
Query: 117 ITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPV--LDLLVQ--------TY 166
I+DA AL++ + P V T LI + + + V +D +VQ TY
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTT--LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 167 A-------KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
K T+ A ++ +EA ++ +++V+ L + +++ M
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
PN +T +I LC G R DA R++ + +P+ + S+LI V+KG
Sbjct: 282 KGVRPNVITYSSLISCLCNYG---RWSDA-SRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
LV+ E L + ++++++ P+ YS +++ L L A +M E M+
Sbjct: 338 KLVKAE-----------KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
PN Y + GFCK R+D+ MEL R M RGL T+ +I G +
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD-CD 445
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
VF+ M+ G P+ L+++ +++ LC+N + +A L P TY+++I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 460 KGYAAKGE 467
+G G+
Sbjct: 506 EGMCKAGK 513
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 20/308 (6%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ VT +++ LC EG + + + +DR++ E H P + + L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEE----GHQPYGTIINGLC----------- 52
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ G E + LL ++ + ++ V Y+ I+ + G A ++ EM G
Sbjct: 53 KMGDTESA----LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF 108
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
P+ Y+ FC+ GR +A +L+R M R + P TF +I G++ E
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS-ALINALVKEGKVSEAEE 167
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
++ ML G P+ ++++ M++ C+ + A L + K P T+S LI GY
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
V ++++ EM + + +T++I C+ G L+ A+ L M S + P+
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Query: 524 IYETMIAS 531
+++M+AS
Sbjct: 288 TFQSMLAS 295
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 23/297 (7%)
Query: 150 FVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSL 209
V H+P ++ KM TE+A ++ +E + + +N+++ L +
Sbjct: 36 MVEEGHQP-YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH 94
Query: 210 VWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDA--LDRIMGERKRSSHSPSAIV 267
+++ M +P+ +T MID+ C+ G R DA L R M ER+ +P +
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSG---RWTDAEQLLRDMIERQI---NPDVVT 148
Query: 268 NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
S+LI +V++G + E E + +L++ + P ++ Y+ ++ + L
Sbjct: 149 FSALINALVKEGKVSEAE-----------EIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
+ A M + M P+ +++ G+CK R+D ME+ M RG+ T+ +
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 388 IIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
I G C G L+ + M+ +G P+ ++F M+ LC +++ +A A L L
Sbjct: 258 IHGFCQVGD--LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
MV +G P+ +T+ G C EGR+ +A+ L+ M G +PYG II G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYG-----TIINGLCKMG 55
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
E L + M + ++ ++++LC++ A T + DKG P TYS
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
+I + G + +L +M + + P + F+++I L + GK+ +AE+ M R
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 517 LLTPDVAIYETMIAS--HEQKGNNARVLQLCNEMAS 550
+ P Y +MI + + N+A+ ++ + MAS
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAK--RMLDSMAS 209
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 5/255 (1%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ L+ R++++ P Y I++ ++G +SAL + +M + + + +Y +
Sbjct: 30 LALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDR 85
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
CK+G A L M +G+ P T+ +I SGR + + M+ P
Sbjct: 86 LCKDGHHIHAQNLFTEMHDKGIFPDVITYSG-MIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++F ++ L + V +A +L +G P TY+ +I G+ + + + ++
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
M KS P + F+++I C+ ++++ + M R + + Y T+I Q
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 536 GNNARVLQLCNEMAS 550
G+ L N M S
Sbjct: 265 GDLDAAQDLLNVMIS 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
R + +F+++++ L + +VS ++Y M+R +P +T MID CK Q
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK----QD 195
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
++ R++ S SP + S+LI G+ + KR + + + R
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLI-----NGYC---KAKRVDNGMEIFCEMHR--- 244
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ +V ++V Y+ ++H ++G LD+A ++ M+ SG PN + S C + + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 365 AMELMRGME 373
A ++ ++
Sbjct: 305 AFAILEDLQ 313
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 178/442 (40%), Gaps = 82/442 (18%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
D +TALSF W ++ F H V SY A L+T L P V
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSY---------ASLVT--------LLCSQEIPYEVPK 81
Query: 140 VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLH 199
+T +I + V + L V + + +F++ ++++ +N++L
Sbjct: 82 ITILMIKSCNSVRDA------LFVVDFCRTMRKGDSFEI-------KYKLTPKCYNNLLS 128
Query: 200 VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L R V + +Y M+ P+ T +++ CK
Sbjct: 129 SLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK--------------------- 167
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
G++VE A VT L +Q PD Y+ +
Sbjct: 168 ------------------LGYVVE--------AKQYVTWL---IQAGCDPDYFTYTSFIT 198
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
R +D+A ++++EM +G N YT G + +IDEA+ L+ M+ P
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP 258
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T+ V+I GSG+ E + +F+ M +G P + +++ C +++A+
Sbjct: 259 NVRTYT-VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L +L+ G +P TY+ LIKG+ K V + + L +M +++ P L + ++I C
Sbjct: 318 LEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 500 CGKLEDAEKYLKTMKSRLLTPD 521
G L+ A + L M+ L P+
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPN 398
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y+ ++ + R G ++ +Y EM+ P+ + + + G+CK G + EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
G P T+ I G ++ VF+ M G + +S+ +++ L E + +
Sbjct: 183 QAGCDPDYFTYTSFITG-HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
++A + L ++ D P TY++LI G+ E + L+ +M + P ++T +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
IQ C L++A L+ M L P+V Y +I +K
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN 344
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 171/383 (44%), Gaps = 15/383 (3%)
Query: 166 YAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPN 225
+ K +AA +E +G ++ +N+++ R + L ++ M+ PN
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 226 AVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEE 285
T I+ID K Q D ++++ S+ + ++ +++I + + G
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQM----NASNFEANEVIYNTIINGLCKVG------ 568
Query: 286 GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
+ + M+ L+K ++ Y+ I+ V++G DSA+E Y EM +G PN
Sbjct: 569 -QTSKAKEMLQNLIK---EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPN 624
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
+TS GFCK R+D A+E+ M+ LK + +I G + ++ +F
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND-MKTAYTLF 683
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+ G +P+ ++ ++ ++ A ++++ G TY+ +I G
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
G + LY E+ + P + ++ L + G+ A K L+ MK + +TP+V +Y
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 526 ETMIASHEQKGNNARVLQLCNEM 548
T+IA H ++GN +L +EM
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEM 826
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 197/471 (41%), Gaps = 54/471 (11%)
Query: 63 LNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARA 122
++D+ V +VLL + ND +AL + +W HR G + + IH+L
Sbjct: 77 VDDARVIEVLLGRR--NDPVSALQYCNWVKPLHRLCEGGDVFWVLIHIL----------- 123
Query: 123 LLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNV 182
L S+ +R + V FVS + + +++V L +++
Sbjct: 124 -LSSIHTHDRASNLL----------VMFVSNNPTLIPNVMVNN-----LVDSS------- 160
Query: 183 EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLL 242
+ GF ++ +FN +L+ R+ R+ D + M+ + P + ++ +L + L+
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
+ ++++ + ++ +++ + L RER V + +R+
Sbjct: 221 DEAKEIYNKMVL---------IGVAGDNVTTQLLMRASL------RERKPEEAVKIFRRV 265
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS-GFEPNSFVYTSFTGGFCKEGR 361
+ + PD + +SL V A + L AL++ EM G + YTS F KEG
Sbjct: 266 MSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN 325
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
++EA+ +M M G G+ P ++ L + L +F M G P + F
Sbjct: 326 MEEAVRVMDEMVGFGI-PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
MVE C+N ++E+A R+ P +I+G K E E + ++
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFE 443
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
S + + C+ GK++ A +LK M+ + + P+V Y M+ +H
Sbjct: 444 SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 165/391 (42%), Gaps = 33/391 (8%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G +S+ + S+++ + + + D++ M P+ V +M++ CK +++
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 246 VDALDRIMGERKRSS--------------HSPSA---IVNSSLILRMVEKGHLVEE---- 284
++ R+ R S SP A I N S + G + +
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF-ESWIAHGFMCNKIFLL 458
Query: 285 ---EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+GK + + LK + Q+ + P+ V Y+ ++ A R+ ++D A ++ EM+ G
Sbjct: 459 FCKQGKVDAAT----SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAG-SGRLE 399
EPN+F Y+ GF K A +++ M + ++ +I G C G + + +
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
E L + + SC S++ +++ + D + A + + G P T++ LI
Sbjct: 575 EMLQ--NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G+ + L++ +EM+ + L + ++I C+ ++ A + L
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
P+V++Y ++I+ G + L +M +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
++ +L++ L P++ YS+++ + +A ++ +M S FE N +Y + G
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
CK G+ +A E+++ + T + II G + + + M G P+
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPN 624
Query: 417 CLSFDKMVEKLCENRDVEQA---NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
++F ++ C++ ++ A + + K LP Y LI G+ K +++
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA---YGALIDGFCKKNDMKTAYT 681
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
L+ E+ + P +SV+ S+I GK++ A K M + ++ D+ Y TMI
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 534 QKGNNARVLQLCNEMASL 551
+ GN L +E+ L
Sbjct: 742 KDGNINLASDLYSELLDL 759
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/328 (17%), Positives = 126/328 (38%), Gaps = 39/328 (11%)
Query: 48 RRSWDAVSRKFGS-LELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSI 106
+ +WD +++ S E N+ + ++ L A K R++ SY+
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 107 AIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR---------- 156
I V+ G A ++ + P V SLI+ GF +
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT--SLIN--GFCKSNRMDLALEMTHEM 651
Query: 157 ---------PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
P L+ + K + A+ + + G +++ +NS++ + ++
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
D+Y+ M+ + T MID L K+G N++ + E P I+
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG----NINLASDLYSELLDLGIVPDEIL 767
Query: 268 NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
+ L+ + +KG ++ +L+ + ++++ P+ + YS ++ R G+L
Sbjct: 768 HMVLVNGLSKKGQFLKAS-----------KMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ A +++EM+ G + V+ G
Sbjct: 817 NEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 180/422 (42%), Gaps = 45/422 (10%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+LV ++ K + AF++ +E R R++ ++ ++H + R+ + ++E M R
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
+ ++I LCK ++++ + E KRS P + L+ E+
Sbjct: 313 GMNADIALYDVLIGGLCK----HKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 281 L------VEEEGKRERVAVMVVTLLKRLLQQNLV-------------------------- 308
L + + ++ V ++ +L + ++ +LV
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 309 --------PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
PDS S++++ V+ +D A+ + ++V +G P +Y + G CKEG
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
R +E+++L+ M+ G++P T + I GC A L + + M GF P
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLN-CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
+V+KLCEN A L + +GFL + I G V L+L+ ++
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
CP + + +I+ LC+ + +A+ M S+ L P VA Y +MI ++G R
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 541 VL 542
L
Sbjct: 668 GL 669
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 16/333 (4%)
Query: 193 SFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRI 252
S + V++ L ++++V + + +++ P + +I+ +CKEG R+ ++L ++
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG---RSEESL-KL 496
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
+GE K + PS + + + E+ V + LLK++ P
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVG-----------ALDLLKKMRFYGFEPWIK 545
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
+ +V G A + +++ GF + T+ G K +D +EL R +
Sbjct: 546 HTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDI 605
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G P + HV+I + R E +F M+ G P+ +++ M++ C+ +
Sbjct: 606 CANGHCPDVIAY-HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+++ + + R+ + P TY+ LI G A G E + + EM+ K P F +
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
+IQ LC+CG +A Y + M+ + + PD A+Y
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 34/294 (11%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
M VTLL ++Q L+P + Y+ I+ + G + +L++ EM +G EP+ F
Sbjct: 457 MAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPY----------------------------GETF- 384
G + A++L++ M G +P+ GE F
Sbjct: 517 GCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFL 576
Query: 385 DHVIIGCAAGSGRL-----EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
H++ AA G + + L +F + G P +++ +++ LC+ +A+
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
++ KG P TY+ +I G+ +GE+ L M P + +TS+I LC
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
G+ +A MK + P+ + +I + G + L EM E+
Sbjct: 697 SGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEM 750
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 193/482 (40%), Gaps = 63/482 (13%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
S ELN +VE VL K A FF+W++K + + + +Y+ +L RA
Sbjct: 68 SPELNTKVVETVLNGFKR---WGLAYLFFNWASKQEGYRNDMYAYNAMASILSRA----- 119
Query: 120 ARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVC 179
R +++A+ ++++ F+S ++ L + A V
Sbjct: 120 ------------RQNASLKALVVDVLNSRCFMSPG---AFGFFIRCLGNAGLVDEASSVF 164
Query: 180 CNVEARGFRVSLA-SFNSVLHVLQRSDR--VSLVWDVYEHMIRGRNYPNAVTLKIMIDAL 236
V G V A ++N +L + +S+ V LV + M + + TL ++
Sbjct: 165 DRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY 224
Query: 237 CKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
C G +R + + I+ H + +V S V+K
Sbjct: 225 CNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAF---------------- 268
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
L++ L ++++ + Y +++H V+ +D A +++E+M G + +Y GG
Sbjct: 269 ELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 357 CKEGRIDEAMELM-----------RGMEGRGLKPYGET-----FDHVIIGCAAGSGRLEE 400
CK ++ A+ L RG+ G+ L + E VIIG +
Sbjct: 329 CKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLL 388
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD--KGFLPGETTYSLL 458
+FE + + SF ++ L N + + + + L D K LP + S++
Sbjct: 389 YKSLFEGFIRNDLVHEAYSF---IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIV 445
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I +V + L +++ + PG ++ ++I+ +C+ G+ E++ K L MK +
Sbjct: 446 INCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGV 505
Query: 519 TP 520
P
Sbjct: 506 EP 507
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 148/387 (38%), Gaps = 44/387 (11%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
S SI I+ LV+A + A LL + PG + + + +
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM--------------------MYNNI 480
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVL-QRSDRVSLVWDVYEHMIRGR 221
++ K +E + + ++ G S + N + L +R D V + D+ + M
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGAL-DLLKKMRFYG 539
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDA---LDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
P ++ LC+ G R VDA LD + GE + MV
Sbjct: 540 FEPWIKHTTFLVKKLCENG---RAVDACKYLDDVAGE--------------GFLGHMVAS 582
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
++ K E V + L + + PD + Y +++ A + A ++ EMV
Sbjct: 583 TAAIDGLIKNEGVD-RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV 641
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
G +P Y S G+CKEG ID + + M P T+ +I G A SGR
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA-SGRP 700
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E + + M G P+ ++F +++ LC+ +A + +K P Y L
Sbjct: 701 SEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSL 760
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCP 485
+ + + + ++ EM +K P
Sbjct: 761 VSSFLSSENINAGFGIFREMVHKGRFP 787
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 171/391 (43%), Gaps = 24/391 (6%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
+V KM T++A ++ +E + + +++++ L + S ++ M+
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN T MID C G R DA R++ + +P + ++LI V++G L
Sbjct: 327 IAPNVFTYNCMIDGFCSFG---RWSDA-QRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E E L +L + + PD+V Y+ +++ + D A M++ M
Sbjct: 383 FEAE-----------KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 428
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEE 400
P+ + + +C+ R+DE M+L+R + RGL T++ +I G C + L
Sbjct: 429 -SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN--LNA 485
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT-YSLLI 459
+F+ M+ G P ++ + ++ CEN +E+A L ++ + +T Y+++I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA-LELFEVIQMSKIDLDTVAYNIII 544
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G +V E L+ + + P + + +I C + DA MK
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
PD + Y T+I + G + ++L +EM S
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 35/352 (9%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY---------------PNAVTLK 230
GF+ + +FN++LH L DR+S ++ +M+ P +T
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
+I+ LC EG + +++++G+ L + +V G +V K
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGK--------------GLHIDVVTYGTIVNGMCKMGD 276
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+ LL ++ + ++ PD V YS I+ + G A ++ EM+ G PN F Y
Sbjct: 277 TK-SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
GFC GR +A L+R M R + P TF+ +I + G+L E + + ML
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN-ALISASVKEGKLFEAEKLCDEMLH 394
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
P ++++ M+ C++ + A + D P T++ +I Y V E
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
++L E+ + + + + ++I C L A+ + M S + PD
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 301 RLLQQNLVPDSVGYSLIVHA----------------KVRLGSLDSALEMYEEMVMSGFEP 344
+L + PD V ++ ++H V G L+ A+ ++++MV G P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTP 224
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLG 403
+ + G C EGR+ EA L+ M G+GL T+ ++ G C G + L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK--SALN 282
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ M P + + ++++LC++ A + +L+KG P TY+ +I G+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+ G + +L +M + + P + F ++I + GKL +AEK M R + PD
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 524 IYETMI 529
Y +MI
Sbjct: 403 TYNSMI 408
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 16/270 (5%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+ ++L +++ + + + +++++ L +L + ++ GF+P+ + +
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 354 GGFCKEGRIDEAMELM---------------RGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
G C E RI EA+ L M GL P TF+ +I G GR+
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL-EGRV 242
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E + M+G G +++ +V +C+ D + A L+++ + P YS +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G + L+ EM K + P + + +I C G+ DA++ L+ M R +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEM 548
PDV + +I++ ++G +LC+EM
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 163/410 (39%), Gaps = 70/410 (17%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
D K+AL+ +TH V YS I L + G +DA+ L + K P
Sbjct: 276 DTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF-- 332
Query: 140 VTDSLID---AVGFVSGSHRPVLDLL-------VQTYAKM--------RLTEAAFDVCCN 181
+ +ID + G S + R + D++ V T+ + +L EA +C
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE-KLCDE 391
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK--- 238
+ R ++NS+++ + +R +D +HM P+ VT +ID C+
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 239 --EGL-LQR-------------------------NVDALDRIMGERKRSSHSPSAIVNSS 270
EG+ L R N++A + E P I +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 271 LILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSA 330
L+ E L E + L + + + D+V Y++I+H + +D A
Sbjct: 508 LLYGFCENEKLEE-----------ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 331 LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG 390
+++ + + G EP+ Y GFC + I +A L M+ G +P T++ +I G
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 391 CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
C +G +++ + + M GF + KMV L + ++++ +++
Sbjct: 617 CLK-AGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSFSDM 664
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 237/541 (43%), Gaps = 57/541 (10%)
Query: 43 DSFRRRRSWDAVSRKFGSLEL----NDSLVEQVLLELK-DPNDAKTALSFFHWSAKTHRF 97
++F + W V F E + VL+++ + + A F W K F
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK-EGF 180
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS-GSHR 156
V SYS I+ L +AG + DA L + ++ + P + LID GF+ H+
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV--TCYNILID--GFLKEKDHK 236
Query: 157 PVLDLL------------VQTYAKM--RLTEAA-FDVCCNVEARGFR----VSLASFNSV 197
++L V+T+ M L++ D C + R + L +++S+
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERK 257
+H L + V V+ + + + VT M+ C+ G ++ +++ L RIM E K
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIM-EHK 354
Query: 258 RSSHSPSAIVNSSLILR-MVEKGHLVEEEGKRERVAVMVVTLLKRLLQ-QNLVPDSVGYS 315
S + IV+ +++++ ++E G + E T++ RL+ + D Y
Sbjct: 355 NSVN----IVSYNILIKGLLENGKIDE------------ATMIWRLMPAKGYAADKTTYG 398
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
+ +H G ++ AL + +E+ SG + + Y S CK+ R++EA L++ M
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 376 GLKPYGETFDHV---IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G+ E HV +IG RL E M G P+ +S++ ++ LC+
Sbjct: 459 GV----ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+A+A + +L+ G+ P TYS+L+ G ++ L+L+++ + + +
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
+I LC GKL+DA + M+ R T ++ Y T++ + G++ R + M +
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 553 L 553
L
Sbjct: 635 L 635
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 172/374 (45%), Gaps = 24/374 (6%)
Query: 162 LVQTYAKMRLTEAAFDVCCNV-EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+++TY K + + A DV + E G ++ S+N++L+ + + V ++ +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER-KRSSHSPSAIVNS---------- 269
PN T ++I CK+ ++ LD + E K S S ++N
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 270 -SLILRMVEKG--------HLVEEEGKRERVAVMVVTLLKRLLQQNLV-PDSVGYSLIVH 319
L M E+G +++ + +E+ + L RLL+ + V P+ +++++
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ G +D L+++E M + E + + Y+S G C G +D+A + ++ R
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T++ ++G G+++E L ++ M + + +S++ +++ L EN +++A
Sbjct: 324 DVVTYN-TMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMI 381
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ KG+ +TTY + I G G V + L + E+E + + S+I CLC+
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 500 CGKLEDAEKYLKTM 513
+LE+A +K M
Sbjct: 442 KKRLEEASNLVKEM 455
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
P Y+ +++A V ++ +G PN Y CK+ ++A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 369 MRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
+ M G KP + F + +I A +G+L++ L +F+ M G P ++ +++
Sbjct: 172 LDWMWKEGFKP--DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Query: 428 CENRDVEQANANLTRLL-DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
+ +D + A RLL D P T++++I G + G V + LK++ M+
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
L ++S+I LC G ++ AE + R + DV Y TM+ + G L+L
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 399 EECLGVFEAMLGA-GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
++ L VF+ M G P+ S++ ++ E + + + G P TY++
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
LIK K E ++ M + P + +++VI L + GKL+DA + M R
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ PDV Y +I ++ ++ ++L + +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 201/520 (38%), Gaps = 70/520 (13%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
S + V VL LKD N A+ +F W + H SY+ + V+ R
Sbjct: 60 SFKPQPEFVIGVLRRLKDVN---RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDA 116
Query: 120 ARALLESLAAKNRDP----------GAVRA-----------------------VTDSLID 146
+L ++ P G V+A +LI
Sbjct: 117 LDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIG 176
Query: 147 AVGFVSGS--------------HRPVLDL---LVQTYAKMRLTEAAFDVCCNVEARGFRV 189
A V+ S + P + L L++ +AK ++A + +++
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
+ +N + + +V + W + + P+ VT MI LCK L V+
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
+ + R+ P +++I+ G E +LL+R + +P
Sbjct: 297 EHLEKNRR----VPCTYAYNTMIMGYGSAGKFDE-----------AYSLLERQRAKGSIP 341
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+ Y+ I+ ++G +D AL+++EEM PN Y C+ G++D A EL
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M+ GL P T + +++ S +L+E +FE M P ++F +++ L +
Sbjct: 401 DSMQKAGLFPNVRTVN-IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
V+ A ++LD Y+ LIK + G ++ K+Y +M ++ P L +
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ + C+ + G+ E + +K+R PD Y +I
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 175/429 (40%), Gaps = 36/429 (8%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
VR+ +I + L ++ + +A A+ E + K P + SLID +G V +D
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC--SLIDGLGKVGR-----VD 464
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+ Y KM D C R + + S++ R +Y+ MI
Sbjct: 465 DAYKVYEKM------LDSDC-------RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ L +D + K G ++ + I R P A S LI +++ G
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR----FVPDARSYSILIHGLIKAGF 567
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
E L + +Q V D+ Y++++ + G ++ A ++ EEM
Sbjct: 568 ANE-----------TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GFEP Y S G K R+DEA L + + ++ + +I G GR++E
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK-VGRIDE 675
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ E ++ G P+ +++ +++ L + ++ +A + + P + TY +LI
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G + + + EM+ + M P +T++I L + G + +A K+ P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 521 DVAIYETMI 529
D A Y MI
Sbjct: 796 DSACYNAMI 804
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 171/407 (42%), Gaps = 52/407 (12%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
+ ++ + ++ K+ + A+ +EA G + ++ S++ VL +++R+ +++EH+
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ R P MI G L ER+R+ S +++ + IL +
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL-----ERQRAKGSIPSVIAYNCILTCLR 354
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
K V+E A+ V +K+ + P+ Y++++ R G LD+A E+ + M
Sbjct: 355 KMGKVDE-------ALKVFEEMKK----DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
+G PN CK ++DEA + M+ + P TF +I G GR
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK-VGR 462
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN----------RDV-------------- 433
+++ V+E ML + + + + +++ + +D+
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 434 -----------EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
E+ A + + F+P +YS+LI G G E +L+Y M+ +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ VI C+CGK+ A + L+ MK++ P V Y ++I
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 187/440 (42%), Gaps = 42/440 (9%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y+I I +L RAG + A L +S+ P VR V ++D L
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN-VRTVN---------------IMVDRL 422
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLA---SFNSVLHVLQRSDRVSLVWDVYEHMIR 219
++ +L EA C E ++V +F S++ L + RV + VYE M+
Sbjct: 423 CKS---QKLDEA----CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
N++ +I G R D +I + + SP + ++ + M + G
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHG---RKEDG-HKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
E+G+ + + + + VPD+ YS+++H ++ G + E++ M
Sbjct: 532 E--PEKGR---------AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
G ++ Y GFCK G++++A +L+ M+ +G +P T+ VI G A RL+
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK-IDRLD 639
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
E +FE + + + +++ + +++A L L+ KG P T++ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
E+ E L + M+ P + +I LC+ K A + + M+ + +
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 520 PDVAIYETMIASHEQKGNNA 539
P Y TMI+ + GN A
Sbjct: 760 PSTISYTTMISGLAKAGNIA 779
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 36/314 (11%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS 152
K RF RSYSI IH L++AG + L S+ ++ G V +D +
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSM----KEQGCV-------LDTRAY-- 590
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
++++ + K A+ + ++ +GF ++ ++ SV+ L + DR+ +
Sbjct: 591 -------NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
++E R N V +ID K G +D I+ E + +P+ +SL+
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVG----RIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
+V+ + E A++ +K L P+ V Y ++++ ++ + A
Sbjct: 700 DALVKAEEINE--------ALVCFQSMKEL---KCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
++EM G +P++ YT+ G K G I EA L + G P ++ +I G +
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 393 AGSGRLEECLGVFE 406
G+ R + +FE
Sbjct: 809 NGN-RAMDAFSLFE 821
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 132/352 (37%), Gaps = 53/352 (15%)
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
VL L+ +R + YE + P + +++ A C RN DALD+I+GE
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARC------RNFDALDQILGEM 124
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ PS ++L V+ L R VV ++++ P Y+
Sbjct: 125 SVAGFGPSVNTCIEMVLGCVKANKL--------REGYDVVQMMRKF---KFRPAFSAYTT 173
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++ A + D L ++++M G+EP ++T+ GF KE
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE----------------- 216
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
GR++ L + + M + + ++ ++ + V+ A
Sbjct: 217 -------------------GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
+ G P E TY+ +I + E ++++ +E P + ++I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
GK ++A L+ +++ P V Y ++ + G L++ EM
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 161/349 (46%), Gaps = 17/349 (4%)
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGL 241
++ RG + S+N ++ + + +V W Y+ M P+ T IM+++ K+G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQG- 587
Query: 242 LQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKR 301
+ + + ++ + K PS + + ++ + E G + E + +L +
Sbjct: 588 ---DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE-----------AIHILNQ 633
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
++ + P+ Y + + + D+ + +E ++ G + + VY + CK G
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+A +M ME RG P TF+ ++ G GS + + L + M+ AG P+ +++
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS-HVRKALSTYSVMMEAGISPNVATYN 752
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ L + +++ + L+ + +G P + TY+ LI G A G ++ + +Y EM
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+ P S + +I GK+ A + LK M R ++P+ + Y TMI+
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 179/424 (42%), Gaps = 89/424 (20%)
Query: 194 FNSVLHVLQRS----DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
+NS++H + D+VSL+ Y MI P+ L ++I + CK G L + L
Sbjct: 96 WNSLIHQFNVNGLVHDQVSLI---YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL 152
Query: 250 -DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLV 308
+R++ S + +++I + E G L +E L +++ ++
Sbjct: 153 RNRVI--------SIDTVTYNTVISGLCEHG-LADE----------AYQFLSEMVKMGIL 193
Query: 309 PDSVGYSLIVHAKVRLGS----------------------------LDSALEMYEEMVMS 340
PD+V Y+ ++ ++G+ L + E Y +MVMS
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH-------------- 386
GF+P+ ++S CK G++ E L+R ME + P T+
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 387 --------------------VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
V++ +G L E F+ +L +P+ +++ +V+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LC+ D+ A +T++L+K +P TYS +I GY KG ++E + L +ME +++ P
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+ +VI L + GK E A + K M+ + + I + ++ ++ G V L
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 547 EMAS 550
+M S
Sbjct: 494 DMVS 497
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 198/448 (44%), Gaps = 37/448 (8%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +YS I+ V+ G++ +A +LL + +N P T +ID + F +G +
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT--VIDGL-FKAGKE----E 451
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+ ++ +MRL VE + +++++ L+R R+ V + + M+
Sbjct: 452 MAIELSKEMRLI--------GVEENNY-----ILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
+ + +ID K G + + M ER S V S +L+ + G
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWA-EEMQERGMPWDVVSYNVLISGMLKFGKVGA 557
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+G RE+ + PD ++++++++ + G + L+++++M
Sbjct: 558 DWAYKGMREK---------------GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G +P+ G C+ G+++EA+ ++ M + P T+ + + ++ R +
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY-RIFLDTSSKHKRADA 661
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
E +L G S ++ ++ LC+ ++A + + +GF+P T++ L+
Sbjct: 662 IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH 721
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
GY V++ L Y M + P ++ + ++I+ L G +++ +K+L MKSR + P
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
D Y +I+ + GN + + EM
Sbjct: 782 DDFTYNALISGQAKIGNMKGSMTIYCEM 809
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 206/499 (41%), Gaps = 70/499 (14%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP--VLD 160
+Y+ I L GL +A L + P V ++LID V R ++D
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY--NTLIDGFCKVGNFVRAKALVD 220
Query: 161 -----------LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSL 209
+L+ +Y + E A+ ++ GF + +F+S+++ L + +V
Sbjct: 221 EISELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 210 VWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS 269
+ M YPN VT ++D+L K + R+ AL M R +V +
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY-RHALALYSQMVVR---GIPVDLVVYT 333
Query: 270 SLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
L+ + + G L E E K LL+ N VP+ V Y+ +V + G L S
Sbjct: 334 VLMDGLFKAGDLREAE-----------KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
A + +M+ PN Y+S G+ K+G ++EA+ L+R ME + + P G T+ VI
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 390 GCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL 449
G +G+ E + + + M G + D +V L +++ + ++ KG
Sbjct: 443 GLFK-AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKY 509
+ Y+ LI + G+ + L EM+ + M + + +I + + GK+ A+
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWA 560
Query: 510 LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC------------------------ 545
K M+ + + PD+A + M+ S ++G++ +L+L
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 546 -----------NEMASLEL 553
N+M +E+
Sbjct: 621 NGKMEEAIHILNQMMLMEI 639
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 208/560 (37%), Gaps = 144/560 (25%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
F+ V ++S I+ L + G + + LL + + P V T L+D++ F + +R
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT--LVDSL-FKANIYR 311
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
L L Y++M + RG V L + ++ L ++ + ++
Sbjct: 312 HALAL----YSQMVV-------------RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
++ PN VT ++D LCK G ++ + + I+ + S P+ + SS+I V
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAG----DLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY---------------------- 314
+KG L E V+LL+++ QN+VP+ Y
Sbjct: 411 KKGMLEE-----------AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Query: 315 --------------SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS-----FTGG 355
+L+ H K R+G + + ++MV G + YTS F GG
Sbjct: 460 MRLIGVEENNYILDALVNHLK-RIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Query: 356 ------------------------------FCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
K G++ A +GM +G++P TF+
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFN 577
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
+++ G E L +++ M G PS +S + +V LCEN +E+A L +++
Sbjct: 578 -IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
P TTY + + + + K + + + V+ ++I LC+ G +
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 506 AEKYLKTMKSRLLTPD-----------------------------------VAIYETMIA 530
A + M++R PD VA Y T+I
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 531 SHEQKGNNARVLQLCNEMAS 550
G V + +EM S
Sbjct: 757 GLSDAGLIKEVDKWLSEMKS 776
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 25/258 (9%)
Query: 107 AIHVLVRAGL------ITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
AIH+L + L +T R L++ ++K++ A+ ++L+ +S R V +
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDT-SSKHKRADAIFKTHETLLSYGIKLS---RQVYN 682
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ T K+ +T+ A V ++EARGF +FNS++H V Y M+
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN T +I L GL++ +D+ + E K P ++LI + G+
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKE----VDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ +G +T+ ++ LVP + Y++++ +G + A E+ +EM
Sbjct: 799 M---KGS--------MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 341 GFEPNSFVYTSFTGGFCK 358
G PN+ Y + G CK
Sbjct: 848 GVSPNTSTYCTMISGLCK 865
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 192/452 (42%), Gaps = 44/452 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++ I+ L G + +A AL+ + K ID V + +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLH-----------IDVVTYGT-------- 266
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+V KM T++A ++ +E + + +++++ L + S ++ M+
Sbjct: 267 -IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
PN T MID C G R DA R++ + +P + ++LI V++G
Sbjct: 326 GIAPNVFTYNCMIDGFCSFG---RWSDA-QRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L E E L +L + + PD+V Y+ +++ + D A M++ M
Sbjct: 382 LFEAE-----------KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-- 428
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLE 399
P+ + + +C+ R+DE M+L+R + RGL T++ +I G C + L
Sbjct: 429 --SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN--LN 484
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT-YSLL 458
+F+ M+ G P ++ + ++ CEN +E+A L ++ + +T Y+++
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA-LELFEVIQMSKIDLDTVAYNII 543
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G +V E L+ + + P + + +I C + DA MK
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
PD + Y T+I + G + ++L +EM S
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 35/352 (9%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY---------------PNAVTLK 230
GF+ + +FN++LH L DR+S ++ +M+ P +T
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
+I+ LC EG + +++++G+ L + +V G +V K
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGK--------------GLHIDVVTYGTIVNGMCKMGD 276
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+ LL ++ + ++ PD V YS I+ + G A ++ EM+ G PN F Y
Sbjct: 277 TK-SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
GFC GR +A L+R M R + P TF+ +I + G+L E + + ML
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN-ALISASVKEGKLFEAEKLCDEMLH 394
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
P ++++ M+ C++ + A + D P T++ +I Y V E
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
++L E+ + + + + ++I C L A+ + M S + PD
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 180/435 (41%), Gaps = 47/435 (10%)
Query: 80 DAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
D K+AL+ +TH V YS I L + G +DA+ L + K P
Sbjct: 276 DTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF-- 332
Query: 140 VTDSLID---AVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
+ +ID + G S + R + D++ R + +FN+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMI---------------------EREINPDVLTFNA 371
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++ + ++ + + M+ +P+ VT MI CK D +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 428
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
SP +V + I+ + + V+E + LL+ + ++ LV ++ Y+
Sbjct: 429 -----SPD-VVTFNTIIDVYCRAKRVDEG----------MQLLREISRRGLVANTTTYNT 472
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++H + +L++A ++++EM+ G P++ GFC+ +++EA+EL ++
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
+ ++ +I G GS +++E +F ++ G P +++ M+ C + A
Sbjct: 533 IDLDTVAYNIIIHGMCKGS-KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
N ++ D G P +TY+ LI+G GE+ + ++L EM +
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEI 651
Query: 497 LCRCGKLEDAEKYLK 511
+CR E E YL+
Sbjct: 652 ICRVSDEEIIENYLR 666
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 144/335 (42%), Gaps = 35/335 (10%)
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL 271
D +++M+R R + AV +I + + +L R M R+ P I + ++
Sbjct: 92 DFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAI-SLYRKMEIRR----IPLNIYSFNI 146
Query: 272 ILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA----------- 320
+++ H + ++ +L + PD V ++ ++H
Sbjct: 147 LIKCFCDCHKLS----------FSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 321 -----KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
V G L+ A+ ++++MV G P + + G C EGR+ EA L+ M G+
Sbjct: 197 ALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 376 GLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
GL T+ ++ G C G + L + M P + + ++++LC++
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
A + +L+KG P TY+ +I G+ + G + +L +M + + P + F ++I
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ GKL +AEK M R + PD Y +MI
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 16/270 (5%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+ ++L +++ + + + +++++ L +L + ++ GF+P+ + +
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 354 GGFCKEGRIDEAMELMRGMEGRG---------------LKPYGETFDHVIIGCAAGSGRL 398
G C E RI EA+ L M G L P TF+ +I G GR+
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL-EGRV 242
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E + M+G G +++ +V +C+ D + A L+++ + P YS +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G + L+ EM K + P + + +I C G+ DA++ L+ M R +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEM 548
PDV + +I++ ++G +LC+EM
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEM 392
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 149/309 (48%), Gaps = 16/309 (5%)
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
TL +I AL G R ++A + + E ++S P ++L+ V+ G L + E
Sbjct: 306 TLVSIISALADSG---RTLEA-EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAES- 360
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
MV + KR + PD YSL++ A V G +SA + +EM +PNSF
Sbjct: 361 ------MVSEMEKR----GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 410
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
V++ GF G + ++++ M+ G+KP F +V+I L+ + F+
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
ML G P ++++ +++ C++ A + +G LP TTY+++I Y +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
++ +L +M+ + + P + T+++ + G+ DA + L+ MKS L P +Y
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 528 MIASHEQKG 536
+I ++ Q+G
Sbjct: 590 LINAYAQRG 598
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 128/308 (41%), Gaps = 16/308 (5%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ T ++IDA G ++ ++ E + P++ V S L+ ++G +
Sbjct: 372 PDEHTYSLLIDAYVNAG----RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+LK + + PD Y++++ + LD A+ ++ M+ G E
Sbjct: 428 -----------TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
P+ + + CK GR A E+ ME RG P T++ ++I R ++
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN-IMINSYGDQERWDDMKR 535
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ M G +P+ ++ +V+ ++ A L + G P T Y+ LI YA
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+G ++ + + M + P L S+I + +A L+ MK + PDV
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 524 IYETMIAS 531
Y T++ +
Sbjct: 656 TYTTLMKA 663
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 161/383 (42%), Gaps = 18/383 (4%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVS--LVWDVYEHMIRGRNYPNAVTLK 230
E A ++ + G++ +++ V+ L RS+++ ++ +Y+ + R + + +
Sbjct: 214 EKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVN 273
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
+I K G + + +++G + + S S+I + + G +E E
Sbjct: 274 DIIMGFAKSGDPSKAL----QLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA---- 325
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
L + L Q + P + Y+ ++ V+ G L A M EM G P+ Y+
Sbjct: 326 -------LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
+ GR + A +++ ME ++P F ++ G G ++ V + M
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR-DRGEWQKTFQVLKEMKS 437
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
G P ++ +++ + ++ A R+L +G P T++ LI + G
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+++ ME + P + + +I + +D ++ L MKS+ + P+V + T++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 531 SHEQKGNNARVLQLCNEMASLEL 553
+ + G ++ EM S+ L
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGL 580
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 172/436 (39%), Gaps = 38/436 (8%)
Query: 61 LELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA 120
LEL+ LV +++ D AL + T SI I L +G +A
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSI-ISALADSGRTLEA 323
Query: 121 RALLESLAAKNRDP----------GAVRAVTDSLIDAVGFVSGSHR----P---VLDLLV 163
AL E L P G V+ T L DA VS + P LL+
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVK--TGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 164 QTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY 223
Y E+A V +EA + + F+ +L + + V + M
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG-HLV 282
P+ ++ID K L + DR++ E P + ++LI + G H+V
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE----GIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
EE + + + ++ +P + Y++++++ D + +M G
Sbjct: 498 AEE------------MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
PN +T+ + K GR ++A+E + M+ GLKP T + +I A G E+ +
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP-SSTMYNALINAYAQRGLSEQAV 604
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
F M G PS L+ + ++ E+R +A A L + + G P TY+ L+K
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Query: 463 AAKGEVQEVLKLYYEM 478
+ Q+V +Y EM
Sbjct: 665 IRVDKFQKVPVVYEEM 680
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/574 (20%), Positives = 241/574 (41%), Gaps = 90/574 (15%)
Query: 37 VAAAICDSFRRRRS-W-DAVSRKFGSLE-LNDSLVEQVLLELKDPNDAKTALSFFHWSAK 93
+A + D+FR+ R+ W +V + L + S+V +VL K NDA A FFHW+ K
Sbjct: 94 IARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVL---KLGNDAAVAAKFFHWAGK 150
Query: 94 THRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSG 153
+ H +Y+ + L R G A L E + ++ R P +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQ--------------- 195
Query: 154 SHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDV 213
++L++ +A R + V ++ GF+ + +N ++ L ++ L V
Sbjct: 196 -----FEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
YE + T I++ LCK G ++ ++ L R+ + + P +++I
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRM----RENLCKPDVFAYTAMIK 306
Query: 274 RMVEKGHL-----VEEEGKRERV-------AVMVVTLLK------------RLLQQNLVP 309
+V +G+L V +E +R+ + +VV L K + + ++
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D Y +++ V G + SA ++E++V SG+ + +Y + G C ++D+A +L
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS----------CLS 419
+ L+P ET +++ RL + V E + G+ S C
Sbjct: 427 QVAIEEELEPDFETLSPIMVAYVV-MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCAD 485
Query: 420 FDK------------------------MVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
+K ++E L + D++++ + + GF P ++Y
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
S+ I + KG+V+ + ++ S P ++ + S+ + LC+ G+++ ++
Sbjct: 546 SIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLG 605
Query: 516 RLLTPDVAIYETMIASHEQKGNNA-RVLQLCNEM 548
+ + + + H KG+NA +V+++ +EM
Sbjct: 606 NVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEM 639
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G++ + Y +F + G A +L M+ +G P + F+ ++I A + R
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFE-ILIRMHADNRRGLR 211
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
V+E M GF P ++++++ L +N + A A + G + TT+ +L+K
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G G ++E+L++ M P + +T++I+ L G L+ + + M+ + P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
DV Y T++ + G R +L EM ++
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
P GY ++V A + ++M + G + + Y + CK RI+ A
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+ M+ RG+ P TF+ + G + G +++ GV E +L GF P ++F ++ LC
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSV-RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLC 506
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
++++ A +L+ G P E TY++LI+ + G+ +KL+ +M+ + P L
Sbjct: 507 RAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLY 566
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ + IQ C+ K++ AE+ LKTM L PD Y T+I + + G
Sbjct: 567 AYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 178/412 (43%), Gaps = 29/412 (7%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ ++ ++ L + DV + G + S +N+V+ L +S+ + L + ++ M
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ T I+I +CK+G+ VD R++ + ++ + P+ + LI + G
Sbjct: 210 GCKPDRFTYNILIHGVCKKGV----VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 281 LVEEEGKRERVAVMVVT------------------------LLKRLLQQNLVPDSVGYSL 316
+ E + E + V + +L ++++ VGY
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+++ + ++ G+ P+S + + K + E + G RG
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
+KP G V++ + R E + M G + S S++ +++ LC+ R +E A
Sbjct: 386 VKP-GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
LT + D+G P T++ + GY+ +G+V++V + ++ P + F+ +I C
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LCR +++DA K M + P+ Y +I S G+ R ++L +M
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 163/408 (39%), Gaps = 47/408 (11%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDP--GAVRAVTDSLIDA----------V 148
V +Y+I I + AG + +A LE + + +P +R + V
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLV 309
Query: 149 GFV---SGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD 205
GF+ S R D ++ + + + + RG+ ++FN+ + L +
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH 369
Query: 206 RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK-----EG---LLQRNVDALDRIMGERK 257
+ +++ + P +++ AL EG L Q VD L
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGL-------L 422
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
S +S +A+++ R +E A M +T ++ + + P+ V ++
Sbjct: 423 SSVYSYNAVIDCLCKARRIEN-------------AAMFLTEMQ---DRGISPNLVTFNTF 466
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
+ G + + E++++ GF+P+ ++ C+ I +A + + M G+
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
+P T++ +I C + +G + + +F M G P +++ ++ C+ R V++A
Sbjct: 527 EPNEITYNILIRSCCS-TGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
L +L G P TYS LIK + G E +++ +E P
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
++G + +MEL++ + G + E V+IG G + C VF + G PS
Sbjct: 122 RKGPLLLSMELLKEIRDSGYRISDELM-CVLIGSWGRLGLAKYCNDVFAQISFLGMKPST 180
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
++ +++ L ++ ++ A ++ G P TY++LI G KG V E ++L +
Sbjct: 181 RLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ 240
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
ME + P + +T +I G++++A K L+ M+ R L P+ A T +
Sbjct: 241 MEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 45/253 (17%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SY+ I L +A I +A L + R ++ +L+ F+SG
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQD--------RGISPNLVTFNTFLSG------- 469
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
Y+ + V + GF+ + +F+ +++ L R+ + +D ++ M+
Sbjct: 470 -----YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW 524
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP-----SAIVNSSLILRM 275
PN +T I+I + C G R+V ++ + K + SP +A + S +R
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSV----KLFAKMKENGLSPDLYAYNATIQSFCKMRK 580
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
V+K EE LLK +L+ L PD+ YS ++ A G A EM+
Sbjct: 581 VKKA----EE------------LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 336 EMVMSGFEPNSFV 348
+ G P+S+
Sbjct: 625 SIERHGCVPDSYT 637
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 23/348 (6%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
S ++ +VL +L ++++L + Y++M P +L ++I ALC+ VDA
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN---DGTVDAG 176
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
+I E + P + +LI + G + +E K+ L +++++ P
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI--DEAKK---------LFTEMVEKDCAP 225
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
V Y+ +++ ++D A+ EEM G EPN F Y+S G CK+GR +AMEL
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M RG +P T+ +I G +++E + + + M G P + K++ C
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCK-EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSL-------LIKGYAAKGEVQEVLKLYYEMEYKS 482
+A L ++ G P T+++ +++G A LY M +
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRG 403
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+ + S+++CLC+ G+ + A + + + + P ++ +I
Sbjct: 404 ISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 176/420 (41%), Gaps = 60/420 (14%)
Query: 174 AAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMI 233
A FD A G+ +SF ++ L +++ D+ M N V + ++
Sbjct: 34 AVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM----KIENCVVSEDIL 89
Query: 234 DALCK-EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
++C+ G + R D+L R+ + K PS +++ +VE+ L
Sbjct: 90 LSICRGYGRVHRPFDSL-RVFHKMKDFDCDPSQKAYVTVLAILVEENQLN---------- 138
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL-GSLDSALEMYEEMVMSGFEPNSFVYTS 351
+ K + + L P ++++ A R G++D+ L+++ EM G +P+S+ Y +
Sbjct: 139 -LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G C+ GRIDEA +L M + P T+ +I G GS ++E + E M
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING-LCGSKNVDEAMRYLEEMKSK 256
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G P+ ++ +++ LC++ QA ++ +G P TY+ LI G + ++QE
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLK-------------------- 511
++L M + + P ++ VI C K +A +L
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 512 ---------------------TMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+M+SR ++ +V E+++ +KG + +QL +E+ +
Sbjct: 377 SNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN VT +I LCK G R DA +R + E +P+ I S+LI ++G L +
Sbjct: 81 PNVVTYSSLITGLCKSG---RLADA-ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
V ++ K ++Q ++ P+ YS +++ +D A++M + M+ G
Sbjct: 137 -----------VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
PN Y++ GF K R+D+ ++L+ M RG+ + + +I G +G+++ LG
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ-AGKIDLALG 244
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
VF M G IP+ S++ ++ L N +VE+A + + TY+++I G
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 304
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
V+E L+Y++++K + P +T +I L R G +A+
Sbjct: 305 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 16/312 (5%)
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
+ V I+ID LCK L+ ++ L R+ K SP+ + SSLI + + G L +
Sbjct: 47 DVVVDTILIDTLCKNRLVVPALEVLKRM----KDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
E + L + + + P+ + +S ++ A + G L +Y+ M+ +P
Sbjct: 103 ERR-----------LHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV 404
N F Y+S G C R+DEA++++ M +G P T+ + G S R+++ + +
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS-RVDDGIKL 210
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
+ M G + +S + +++ + ++ A + G +P +Y++++ G A
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
GEV++ L + M+ + +T +I +C+ +++A +K + + PD
Sbjct: 271 NGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKA 330
Query: 525 YETMIASHEQKG 536
Y MIA + G
Sbjct: 331 YTIMIAELNRAG 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
+M+ G EP+ +S GFC I +A+ + ME G+K D ++I +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIK-RDVVVDTILIDTLCKN 61
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
+ L V + M G P+ +++ ++ LC++ + A L + K P T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 456 SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
S LI YA +G++ +V +Y M S+ P + ++S+I LC ++++A K L M S
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 516 RLLTPDVAIYETM 528
+ TP+V Y T+
Sbjct: 182 KGCTPNVVTYSTL 194
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%)
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
M+ G P ++ +V C + ++ A ++ G ++LI
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
V L++ M+ + + P + ++S+I LC+ G+L DAE+ L M S+ + P+V +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 528 MIASHEQKGNNARV 541
+I ++ ++G ++V
Sbjct: 124 LIDAYAKRGKLSKV 137
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 200/461 (43%), Gaps = 39/461 (8%)
Query: 38 AAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRF 97
A +I R + W + R S ++ L L+ N+ +L FF ++ +
Sbjct: 45 AVSILTHHRSKSRWSTL-RSLQPSGFTPSQFSEITLCLR--NNPHLSLRFFLFTRRYSLC 101
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLE---SLAAKNRDPGAVRAVTDSLIDAVGFVSGS 154
+H S S IH+L R+ L + A ++ LAA + D V V SLI + GS
Sbjct: 102 SHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRC-GS 160
Query: 155 HRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVY 214
V DLL+++ + + A V + +RG +++ N+++ + R S + +Y
Sbjct: 161 APFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMY 220
Query: 215 EHM-------------IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS-S 260
+ + G+ PNA T M+ + +EG + ++RI E +
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREG----ETEMVERIWREMEEEVG 276
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA 320
SP+ + L+ +G + E E E + V + +V D V Y+ ++
Sbjct: 277 CSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKV-----------RGVVYDIVAYNTMIGG 325
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPY 380
+ A E++ +M + G E Y G+CK G +D + + R M+ +G +
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 381 GETFDHVIIG-CAAGSGR--LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
G T + ++ G C G+ +E V +A+ A F PS ++ +V++LCE+ +++A
Sbjct: 386 GLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRAL 445
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ KGF P + TY I GY G+ + L EM
Sbjct: 446 NIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR-GLKPYGETF 384
S+D A +M + +PN+ + S F +EG + + R ME G P ++
Sbjct: 230 SVDEAKKM-----IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ V++ G + E V+E M G + ++++ M+ LC N +V +A +
Sbjct: 285 N-VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM-CPGLSVFTSVIQCLC--RCG 501
KG TY L+ GY G+V L +Y EM+ K GL++ ++++ LC R G
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI-EALVEGLCDDRDG 402
Query: 502 K--LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ +E A+ ++ + P YE ++ + G R L + EM
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 153/332 (46%), Gaps = 18/332 (5%)
Query: 183 EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLL 242
E FR ++ S++ ++ + +W + + M++ A T ++I + + GL
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 200
Query: 243 QRNVDALDRIMGERKRS-SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKR 301
++ V + R HS +AI+NS L V++ L+E + K+
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHSYNAILNS---LLGVKQYKLIE-------------WVYKQ 244
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+L+ PD + Y++++ RLG +D +++EM GF P+S+ Y K +
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
A+ + M+ G+ P + +I G + +G LE C + M+ AG P + +
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR-AGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
M+ + ++++A + KG LP TY+ +I+G GE +E L EME +
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
P V+++++ L + GKL +A K ++ M
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 182/429 (42%), Gaps = 44/429 (10%)
Query: 25 FPRNSNHNAVDDVAAAICD--SFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDA- 81
F ++NH+A + D F + D ++ + L + + LV +L L N A
Sbjct: 69 FLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLV-GILRNLSYDNKAR 127
Query: 82 --KTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRA 139
K A FF WS + F H V SY + + + G + A+
Sbjct: 128 CAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECG-----------------EYKAMWR 170
Query: 140 VTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLH 199
+ D ++ GF + + +LL+ + + L + A + +R S+N++L+
Sbjct: 171 LVDEMVQD-GFPTTAR--TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILN 227
Query: 200 VLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L + L+ VY+ M+ P+ +T I++ + G +D DR+ E R
Sbjct: 228 SLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG----KMDRFDRLFDEMARD 283
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
SP + +++L ++ KG+ + +T L + + + P + Y+ ++
Sbjct: 284 GFSPDSYT-YNILLHILGKGN----------KPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
R G+L++ +EMV +G P+ YT G+ G +D+A E+ R M +G P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 380 YGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
T++ +I G C AG R E + + M G P+ + + +V L + + +A
Sbjct: 393 NVFTYNSMIRGLCMAGEFR--EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 439 NLTRLLDKG 447
+ ++ KG
Sbjct: 451 VIREMVKKG 459
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 204/504 (40%), Gaps = 82/504 (16%)
Query: 21 SHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKF------GSLELNDSLVEQVLLE 74
SH +NS + D+ A+ + S+R R + + K +EL L+E+VL
Sbjct: 66 SHNDRTKNSKY---DEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNR 122
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
D + FF W+AK R+ H + Y + +L + L+E + +N
Sbjct: 123 CGDAGN--LGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--- 177
Query: 135 GAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASF 194
LI+ FV +LVQ +A + + A +V + GF
Sbjct: 178 -------PQLIEPELFV---------VLVQRFASADMVKKAIEVLDEMPKFGFE------ 215
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMG 254
P+ ++DALCK G ++ DA +
Sbjct: 216 -----------------------------PDEYVFGCLLDALCKHGSVK---DAAK--LF 241
Query: 255 ERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY 314
E R + +SL+ G ++E + +L ++ + PD V Y
Sbjct: 242 EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAK-----------YVLVQMNEAGFEPDIVDY 290
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
+ ++ G + A ++ +M GFEPN+ YT CK R++EAM++ ME
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
+ T+ ++ G G++++C V + M+ G +PS L++ ++ + E
Sbjct: 351 YECEADVVTYTALVSGFCKW-GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
+ + ++ + P Y+++I+ GEV+E ++L+ EME + PG+ F +I
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLL 518
L G L +A + K M +R L
Sbjct: 470 NGLASQGCLLEASDHFKEMVTRGL 493
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 155/350 (44%), Gaps = 22/350 (6%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVT---LKIMIDALCKEGLLQRNV 246
S+ + S++ +L + + VW + E M R N P + +++ ++++ +
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM-RKEN-PQLIEPELFVVLVQRFASADMVKKAI 203
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQN 306
+ LD E + P V L+ + + G + + A + ++ N
Sbjct: 204 EVLD----EMPKFGFEPDEYVFGCLLDALCKHGSVKD--------AAKLFEDMRMRFPVN 251
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
L ++ +++ R+G + A + +M +GFEP+ YT+ G+ G++ +A
Sbjct: 252 LR----YFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
+L+R M RG +P + V+I R+EE + VF M +++ +V
Sbjct: 308 DLLRDMRRRGFEPNANCYT-VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C+ +++ L ++ KG +P E TY ++ + K +E L+L +M P
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ ++ VI+ C+ G++++A + M+ L+P V + MI +G
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 7/261 (2%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD---SALEMYEEMVMSGFEPNSFVYTS 351
V L++ + ++N P + L V R S D A+E+ +EM GFEP+ +V+
Sbjct: 166 VWGLIEEMRKEN--PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
CK G + +A +L M R P + ++ G++ E V M A
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRF--PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA 281
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
GF P + + ++ + A L + +GF P Y++LI+ ++E
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+K++ EME + +T+++ C+ GK++ L M + L P Y ++ +
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 532 HEQKGNNARVLQLCNEMASLE 552
HE+K + L+L +M +E
Sbjct: 402 HEKKESFEECLELMEKMRQIE 422
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 149/370 (40%), Gaps = 41/370 (11%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSH 155
RF +R ++ ++ R G + +A+ +L + +P ++D +SG
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEP--------DIVDYTNLLSG-- 296
Query: 156 RPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYE 215
YA A+D+ ++ RGF + + ++ L + DR+ V+
Sbjct: 297 ----------YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFV 346
Query: 216 HMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRM 275
M R + VT ++ CK G + + LD ++ + PS + +++
Sbjct: 347 EMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI----KKGLMPSELTYMHIMVAH 402
Query: 276 VEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYE 335
EK EE + L++++ Q PD Y++++ +LG + A+ ++
Sbjct: 403 -EKKESFEE----------CLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 336 EMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL---KPYGETFDHVIIGCA 392
EM +G P + G +G + EA + + M RGL YG +++
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTL--KLLLNTV 509
Query: 393 AGSGRLEECLGVFEAMLGAGFIP-SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG 451
+LE V+ + G + LS+ + L ++A + +++ F+P
Sbjct: 510 LKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQ 569
Query: 452 ETTYSLLIKG 461
T++ L+KG
Sbjct: 570 PDTFAKLMKG 579
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 188/410 (45%), Gaps = 27/410 (6%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ YA R + A ++ G +SL +++ ++ ++ ++ R
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH 409
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL----ILRMVE 277
NA +I A C+ ++R +AL R M E +P AI ++ + ++ +
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMER-AEALVREMEEE--GIDAPIAIYHTMMDGYTMVADEK 466
Query: 278 KGHLVEEEGKRERVAVMVVTL------------------LKRLLQQNLVPDSVG-YSLIV 318
KG +V + K VVT + R++++ V ++ YS+++
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
+ V+L +A ++E+MV G +P+ +Y + FC G +D A++ ++ M+ +
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
P TF +I G A SG + L VF+ M G +P+ +F+ ++ L E R +E+A
Sbjct: 587 PTTRTFMPIIHGYAK-SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L + G E TY+ +++GYA+ G+ + + + ++ + + + + ++++ C
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ G+++ A K M +R + + +Y +I ++G+ L +M
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 171/393 (43%), Gaps = 22/393 (5%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ Y K+ A +V ++ G + +L +++ +++ + + + V+E M++
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ + +I A C G N+D + + E ++ H P+ +I + G +
Sbjct: 550 MKPDVILYNNIISAFCGMG----NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
R ++ V +++R VP ++ +++ V ++ A+E+ +EM ++G
Sbjct: 606 --------RRSLEVFDMMRRC---GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
N YT G+ G +A E ++ GL T++ ++ C SGR++
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK-SGRMQSA 713
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L V + M + ++ +++ DV +A + ++ +G P TY+ I
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ G++ + EME + P + +T++I+ R E A + MK+ + PD
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 522 VAIYETMIASHEQKGNNAR------VLQLCNEM 548
A+Y ++ S + + A V+ +C EM
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 36/278 (12%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
P + L+V R G + A E +E M G P S +YTS + +DEA+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+R M+ G++ T+ VI+G + +G E F+ + + K++ C
Sbjct: 367 VRKMKEEGIEMSLVTYS-VIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 429 ENRDVEQANA-----------------------------------NLTRLLDKGFLPGET 453
+ ++E+A A RL + GF P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
TY LI Y G++ + L++ M+ + + L ++ +I + +A + M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 514 KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
+ PDV +Y +I++ GN R +Q EM L
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 192/457 (42%), Gaps = 31/457 (6%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAA--KNRDPGAVRAVTDSLIDAVGFVSGS 154
F G+R + +V+ GL D R+ + L A K R + ++D SG
Sbjct: 170 FEEGLRVFD----YMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD-----SGV 220
Query: 155 HRPV--LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
V L ++V+ + E + + +G + ++N++++ + S V
Sbjct: 221 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEG 280
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
V + M + N VT ++++ K G + DA +++ E + V +SLI
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMS---DA-EKLFDEMRERGIESDVHVYTSLI 336
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
KG++ KR L L ++ L P S Y ++ ++G + +A
Sbjct: 337 SWNCRKGNM-----KR------AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD-HVIIGC 391
+ EM G V+ + G+C++G +DEA + ME +G + + F + I C
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ--ADVFTCNTIASC 443
Query: 392 AAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG 451
R +E M+ G S +S+ +++ C+ +VE+A + KG P
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 452 ETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLK 511
TY+++I Y +G+++E KL ME M P +TS+I C +++A +
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 512 TMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
M + L + Y MI+ + G + L +EM
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 177/413 (42%), Gaps = 39/413 (9%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAK------------------NRDPGAVRAVTD 142
V S +I + L R G + ++ L++ + K RD V V
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 143 SLI-DAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVL 201
+ D V + ++ +++L V+ KM E FD + RG + + S++
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKN-GKMSDAEKLFD---EMRERGIESDVHVYTSLISWN 339
Query: 202 QRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSH 261
R + + +++ + P++ T +ID +CK G + A + +M E +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG----EMGAAEILMNEMQSKGV 395
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAK 321
+ + +V ++LI KG +V+E A M+ +++ Q+ D + I
Sbjct: 396 NITQVVFNTLIDGYCRKG-MVDE-------ASMIYDVME---QKGFQADVFTCNTIASCF 444
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
RL D A + M+ G + ++ YT+ +CKEG ++EA L M +G++P
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
T+ +V+I G+++E + M G P ++ ++ C +V++A +
Sbjct: 505 ITY-NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
+ KG TY+++I G + G+ E LY EM+ K V+T++I
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 158/391 (40%), Gaps = 51/391 (13%)
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
DL+ + Y + E V + +G + S L ++ R+ L +++ M+
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
+L I+++ LC+ G ++++ +++ E P A +++I V++
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKS----KKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
EG +LK + + +V + V Y+L++ V+ G + A ++++EM
Sbjct: 274 DFSGVEG-----------VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
G E + VYTS C++G + A L
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLL------------------------------- 351
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
F+ + G PS ++ +++ +C+ ++ A + + KG + ++ LI
Sbjct: 352 -----FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
GY KG V E +Y ME K + ++ C R + ++A+++L M +
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
Y +I + ++GN +L EM+S
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 20/238 (8%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
V + L+ Y + + + A + +E +GF+ + + N++ R R M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
+ G + V+ +ID CKEG NV+ R+ E P+AI + +I +
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEG----NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
+G + E R + + PDS Y+ ++H + ++D A+ ++ EM
Sbjct: 517 QGKIKEARKLRANMEA-----------NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
+ G + NS YT G K G+ DEA L M+ +G T D+ + GS
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY-----TIDNKVYTALIGS 618
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 209/499 (41%), Gaps = 26/499 (5%)
Query: 21 SHTAFP--RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDP 78
++T P RN D + S + WD +++ S L+ V+ VLL+++
Sbjct: 37 ANTPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKL--SDHLDSFRVKNVLLKIQ-- 92
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
D +L FF+W+ + +H + +++I +H L + A ++L + N
Sbjct: 93 KDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV-NGGVDLPA 151
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
V D+L+ + + R V D L +T+A ++ A D ++ GF ++ S N+ +
Sbjct: 152 KVFDALLYSYRECDSTPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM 210
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L RV + Y M R + PN TL +++ C+ G L + ++ L + +R
Sbjct: 211 SSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ----DMER 266
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
+ + ++LI EKG L + L + + L P+ V ++ ++
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSS-----------ALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
H R L A +++ EM PN+ Y + G+ ++G + A M G++
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 379 PYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
T++ +I G C R + + + +P+ +F ++ C ++ ++
Sbjct: 376 RDILTYNALIFGLCKQAKTR--KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
++ G P E T+++L+ + + ++ EM +S+ V L
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 498 CRCGKLEDAEKYLKTMKSR 516
GK + +K L+ M+ +
Sbjct: 494 KHQGKDQLVKKLLQEMEGK 512
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G +D AL Y EM PN + G+C+ G++D+ +EL++ ME G + ++
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I G G L L + M +G P+ ++F+ ++ C +++A+ +
Sbjct: 277 NTLIAG-HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
P TY+ LI GY+ +G+ + + Y +M + + + ++I LC+ K
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A +++K + L P+ + + +I + N R +L M
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSF--VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
G +D ++++ ++ S E +S V+ S F + A + M+ G P E
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
+ + + G GR++ L + M P+ + + ++ C + +++ L
Sbjct: 205 SCN-AYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+ GF + +Y+ LI G+ KG + LKL M + P + F ++I CR K
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
L++A K MK+ + P+ Y T+I + Q+G++ + +M
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 209/499 (41%), Gaps = 26/499 (5%)
Query: 21 SHTAFP--RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDP 78
++T P RN D + S + WD +++ S L+ V+ VLL+++
Sbjct: 37 ANTPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKL--SDHLDSFRVKNVLLKIQ-- 92
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
D +L FF+W+ + +H + +++I +H L + A ++L + N
Sbjct: 93 KDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV-NGGVDLPA 151
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
V D+L+ + + R V D L +T+A ++ A D ++ GF ++ S N+ +
Sbjct: 152 KVFDALLYSYRECDSTPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM 210
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L RV + Y M R + PN TL +++ C+ G L + ++ L + +R
Sbjct: 211 SSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ----DMER 266
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
+ + ++LI EKG L + L + + L P+ V ++ ++
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSS-----------ALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
H R L A +++ EM PN+ Y + G+ ++G + A M G++
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 379 PYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
T++ +I G C R + + + +P+ +F ++ C ++ ++
Sbjct: 376 RDILTYNALIFGLCKQAKTR--KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
++ G P E T+++L+ + + ++ EM +S+ V L
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 498 CRCGKLEDAEKYLKTMKSR 516
GK + +K L+ M+ +
Sbjct: 494 KHQGKDQLVKKLLQEMEGK 512
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G +D AL Y EM PN + G+C+ G++D+ +EL++ ME G + ++
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ +I G G L L + M +G P+ ++F+ ++ C +++A+ +
Sbjct: 277 NTLIAG-HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
P TY+ LI GY+ +G+ + + Y +M + + + ++I LC+ K
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A +++K + L P+ + + +I + N R +L M
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSF--VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
G +D ++++ ++ S E +S V+ S F + A + M+ G P E
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
+ + + G GR++ L + M P+ + + ++ C + +++ L
Sbjct: 205 SCN-AYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+ GF + +Y+ LI G+ KG + LKL M + P + F ++I CR K
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
L++A K MK+ + P+ Y T+I + Q+G++ + +M
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 220/512 (42%), Gaps = 54/512 (10%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
SL+ +D L+ +L L+ +A L F+ ++K +F ++Y +H+L RA
Sbjct: 65 SLDFSDELLNSILRRLRLNPEA--CLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQ 122
Query: 120 ARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP-VLDLLVQTYAKMRLTEAAFDV 178
++ L L A N G V V L+ F S P V D++++ YA+ L + A V
Sbjct: 123 TKSYLCELVALNHS-GFV--VWGELVRV--FKEFSFSPTVFDMILKVYAEKGLVKNALHV 177
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK 238
N+ G SL S NS+L L R + VY+ MI P+ T I+++A C+
Sbjct: 178 FDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCR 237
Query: 239 EGLLQR--------------------------------NVDALDRIMGERKRSSHSPSAI 266
G + + +V+ + R++ S + +
Sbjct: 238 SGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVV 297
Query: 267 VNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
+SLI +KG + E E V LLK ++ LV D Y +++ R G
Sbjct: 298 TYTSLIKGYCKKGLMEEAE--------HVFELLK---EKKLVADQHMYGVLMDGYCRTGQ 346
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
+ A+ +++ M+ G N+ + S G+CK G++ EA ++ M LKP T++
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 387 VIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
++ G C AG ++E L + + M +P+ ++++ +++ + +L
Sbjct: 407 LVDGYCRAGY--VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+G E + S L++ G+ E +KL+ + + + +I LC+ K+ +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
A++ L + P V Y+ + + + GN
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGN 556
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 199/488 (40%), Gaps = 60/488 (12%)
Query: 90 WSAKT--HRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
WS K H +N V Y RAG + +A L + + K P +
Sbjct: 395 WSLKPDHHTYNTLVDGYC-------RAGYVDEALKLCDQMCQKEVVPTVM---------- 437
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
++L++ Y+++ + + RG S +++L L +
Sbjct: 438 ----------TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER-KRSSHSPSAI 266
+ ++E+++ + +TL +MI LCK + + LD + R K + + A+
Sbjct: 488 NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Query: 267 VNSSLILRMVEKGHLVEEEGKRE-----------------------RVAVMVVTLLKRLL 303
+ + +++ V+E +R+ +VA +V+ L R
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR-- 605
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
L P Y ++ +G +D A EM+ G N + + + +ID
Sbjct: 606 --GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 364 EAMELMRGM-EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE-AMLGAGFIPSCLSFD 421
EA L++ + + L P ++ + A + ++ E + +P+ + ++
Sbjct: 664 EACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYN 723
Query: 422 KMVEKLCENRDVEQANANLTRLLDKG-FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
+ LC+ +E A + LL F+P E TY++LI G A G++ + L EM
Sbjct: 724 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 783
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
K + P + + ++I+ LC+ G ++ A++ L + + +TP+ Y T+I + GN A
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Query: 541 VLQLCNEM 548
++L +M
Sbjct: 844 AMRLKEKM 851
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 159/392 (40%), Gaps = 26/392 (6%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ YA + E V + RG ++ ++ S++ + + V+E + +
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ +++D C+ G ++ V D ++ R++ + + +SLI + G L
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT----ICNSLINGYCKSGQL 382
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
VE E + R+ +L PD Y+ +V R G +D AL++ ++M
Sbjct: 383 VEAE-----------QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
P Y G+ + G + + L + M RG+ E ++ G E
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA-DEISCSTLLEALFKLGDFNEA 490
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA-----NANLTRLLDKGFLPGETTYS 456
+ ++E +L G + ++ + M+ LC+ V +A N N+ R P TY
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK-----PAVQTYQ 545
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
L GY G ++E + ME K + P + ++ ++I + L + +++R
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LTP VA Y +I G + C EM
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR-GLKPY 380
VR G AL +Y++M+ P+ F + +C+ G +D+AM + E GL+
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
T++ +I G A G +E V M G + +++ +++ C+ +E+A
Sbjct: 261 VVTYNSLINGYAM-IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
L +K + + Y +L+ GY G++++ ++++ M + ++ S+I C+
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
G+L +AE+ M L PD Y T++ + + G L+LC++M E+
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
PN+ VY G CK G++++A +L + P T+ +I GCA +G + +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI-AGDINKAF 775
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+ + M G IP+ ++++ +++ LC+ +V++A L +L KG P TY+ LI G
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPG 486
G V E ++L +M K + G
Sbjct: 836 VKSGNVAEAMRLKEKMIEKGLVRG 859
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN + + I LCK G L+ DA P + LI G + +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLE---DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINK 773
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
R+ +A+ + ++P+ V Y+ ++ +LG++D A + ++ G
Sbjct: 774 AFTLRDEMAL-----------KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
PN+ Y + G K G + EAM L M +GL
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 181/449 (40%), Gaps = 43/449 (9%)
Query: 61 LELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA 120
L L + V VL + D L FF W+A+ F+H ++ +L A L+T
Sbjct: 108 LRLTEKFVLDVLSHTR--YDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLVT-- 163
Query: 121 RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVL-DLLVQTYAKMRLTEAAFDVC 179
+ D L +VGF S H L D LV YA T+ A
Sbjct: 164 ------------------LMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHF 205
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE 239
N+ RG + ++ +L+ L ++ +DV I R + AVT I++ CK+
Sbjct: 206 GNMRFRGLDLDSFGYHVLLNALV-EEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQ 264
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
G L D L ++ S I+ +L +R LL
Sbjct: 265 GKLDEAEDYLRALLPNDPAGCGSGLGILVDALC---------------SKRKFQEATKLL 309
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV-MSGFEPNSFVYTSFTGGFCK 358
+ V Y++ + A ++ G L++ + +++ + G E F Y S K
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVI-IGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
E +D +++ M RG+ P +T + + C AG ++E L ++ + GF P+
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF--VDEALELYRSRSEIGFAPTA 427
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+S++ ++ LC N VEQA L +D+G G T+S L KG+ +L
Sbjct: 428 MSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIA 487
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
+ + P +I LC GK+EDA
Sbjct: 488 AAERDLLPKRIAGCKIISALCDVGKVEDA 516
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 149/385 (38%), Gaps = 74/385 (19%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVY-EHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
G + + +NS++ L + + + V+D+ E M+RG + PN T+ + CK G
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVS-PNKKTMNAALCFFCKAGF--- 407
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRM----------------VEKGHLVE----- 283
VD + R +P+A+ + LI + +++GH +
Sbjct: 408 -VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFS 466
Query: 284 -------EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
+GK + +V+ +R +L+P + I+ A +G ++ AL + E
Sbjct: 467 TLTNALCWKGKPDMARELVIAAAER----DLLPKRIAGCKIISALCDVGKVEDALMINEL 522
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI-------- 388
SG + + ++TS G R D A +L+ M+ +G P + +VI
Sbjct: 523 FNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMES 582
Query: 389 ---------------------------IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
I A +G+ + V++ M G P+ S
Sbjct: 583 GEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNI 642
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
M++ +N + A L ++G + Y ++I G ++ + + EM+ +
Sbjct: 643 LMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGE 701
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDA 506
+ P + + IQ LC K ++A
Sbjct: 702 GLQPSIECYEVNIQKLCNEEKYDEA 726
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 188/450 (41%), Gaps = 42/450 (9%)
Query: 61 LELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA 120
L ++ +VE VL + N FF WS K + H VR+Y H+++ +
Sbjct: 96 LRVSQEVVEDVLNRFR--NAGLLTYRFFQWSEKQRHYEHSVRAY----HMMIESTAKIRQ 149
Query: 121 RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCC 180
L+ L R + T ++ ++ YA+ + + A
Sbjct: 150 YKLMWDLINAMRKKKMLNVETFCIV-----------------MRKYARAQKVDEAIYAFN 192
Query: 181 NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG 240
+E +L +FN +L L +S V +V+E+M R R P++ T I+++ KE
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEP 251
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
N+ + E + P + S ++ + + G + E G +++
Sbjct: 252 ----NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG-----------IVR 296
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
+ P + YS++VH L+ A++ + EM SG + + V+ S G FCK
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKAN 356
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
R+ +++ M+ +G+ P ++ + +I+ G +E VF M+ P ++
Sbjct: 357 RMKNVYRVLKEMKSKGVTPNSKSCN-IILRHLIERGEKDEAFDVFRKMIKVC-EPDADTY 414
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
+++ CE +++E A+ + KG P T+S+LI G + Q+ L EM
Sbjct: 415 TMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 474
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
+ P F + Q L + + ED K+L
Sbjct: 475 MGIRPSGVTFGRLRQLLIK-EEREDVLKFL 503
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 26/355 (7%)
Query: 214 YEHMIRGRNYPNAVTLKI--------MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSA 265
YEH +R + T KI +I+A+ K+ +L NV+ +M + R+ A
Sbjct: 130 YEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML--NVETFCIVMRKYARAQKVDEA 187
Query: 266 IVNSSLILRMVEKGHLVEEEG--------KRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
I +++ + +LV G K R A V ++ PDS YS++
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR----DRFTPDSKTYSIL 243
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
+ + +L A E++ EM+ +G P+ Y+ CK GR+DEA+ ++R M+
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 378 KPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQA 436
KP TF + V++ RLEE + F M +G F+ ++ C+ ++
Sbjct: 304 KP--TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
Query: 437 NANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQC 496
L + KG P + +++++ +GE E ++ +M K P +T VI+
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKM 420
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
C ++E A+K K M+ + + P + + +I ++ + L EM +
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEM 475
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
L R L+ D+V Y++I++ + ALE+ +EMV G PN Y + GF +
Sbjct: 183 LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
G+I A E M+ R + T+ V+ G +G ++ VF+ M+ G +PS
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV-AGEIKRARNVFDEMIREGVLPSVA 301
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+++ M++ LC+ +VE A ++ +G+ P TTY++LI+G GE +L M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
E + P + +I+ C ++E A + M S P++ Y +I+
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 167/384 (43%), Gaps = 53/384 (13%)
Query: 66 SLVEQVLLELKDPNDAKTALSFFHWSAKTHR-FNHGVRSYSIAIHVLVRAGLITDARALL 124
+LV VL L N AL FFH+ HR + H S+ +AI + R L +L+
Sbjct: 57 NLVNSVLKRLW--NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 125 ESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEA 184
+ + P ++ + YA + A + N+
Sbjct: 115 HRMRSLRIGPSP--------------------KTFAIVAERYASAGKPDKAVKLFLNMHE 154
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
G LASFN++L VL +S RV ++++ +RGR + VT ++++ C L++R
Sbjct: 155 HGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWC---LIKR 210
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE-----EGKRERVAVMVVTL- 298
AL+ ++ E +P+ ++++ G + E K+ + VVT
Sbjct: 211 TPKALE-VLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 299 -----------LKR-------LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+KR ++++ ++P Y+ ++ + ++++A+ M+EEMV
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G+EPN Y G G ELM+ ME G +P +T++ ++I + +E+
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYN-MMIRYYSECSEVEK 388
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMV 424
LG+FE M +P+ +++ ++
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILI 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 2/254 (0%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V +L+ R+ + P ++++ G D A++++ M G + + +
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
CK R+++A EL R + GR T++ VI+ R + L V + M+ G
Sbjct: 170 VLCKSKRVEKAYELFRALRGR-FSVDTVTYN-VILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P+ +++ M++ + A + + TY+ ++ G+ GE++ +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 475 YYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
+ EM + + P ++ + ++IQ LC+ +E+A + M R P+V Y +I
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 535 KGNNARVLQLCNEM 548
G +R +L M
Sbjct: 348 AGEFSRGEELMQRM 361
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 2/245 (0%)
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ V D+ + L + RL + + M P+ + + G+ D
Sbjct: 84 HREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD 143
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
+A++L M G +F+ I+ S R+E+ +F A+ G F ++++ +
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFN-TILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+ C + +A L ++++G P TTY+ ++KG+ G+++ + + EM+ +
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
+ +T+V+ G+++ A M + P VA Y MI +K N +
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 544 LCNEM 548
+ EM
Sbjct: 322 MFEEM 326
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 163/355 (45%), Gaps = 17/355 (4%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD-RVSLVWDVYEHMIR 219
+L+ YAKM + E A + ++ R + ++N +L V+ R + L + VY M++
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
PN T I++D L K+G R DA ++ + SP+ + + LI + ++G
Sbjct: 192 CNCSPNLYTFGILMDGLYKKG---RTSDA-QKMFDDMTGRGISPNRVTYTILISGLCQRG 247
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
++ ++ L + PDSV ++ ++ +LG + A E+
Sbjct: 248 S--ADDARK---------LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
GF Y+S G + R +A EL M + +KP + +I G + +G++E
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK-AGKIE 355
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ L + +M G P ++ +++ LC +E+ + + + P T+++LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
G V+E +++ E+E P ++ F ++I LC+ G+L++A L M+
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 17/344 (4%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
F V+ +L + L W E + G ++ ++I A K G+ ++ V++ R+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM- 153
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV-TLLKRLLQQNLVPDSV 312
K P + ++ILR++ RE V M+ + +L+ N P+
Sbjct: 154 ---KEFDCRPD-VFTYNVILRVM----------MREEVFFMLAFAVYNEMLKCNCSPNLY 199
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
+ +++ + G A +M+++M G PN YT G C+ G D+A +L M
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ G P + ++ G GR+ E + GF+ + +++ L R
Sbjct: 260 QTSGNYPDSVAHNALLDGFCK-LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
QA +L K P Y++LI+G + G++++ LKL M K + P + +
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
VI+ LC G LE+ M PD + +I S + G
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDS-ALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
R+ + + PD Y++I+ +R A +Y EM+ PN + + G K+
Sbjct: 152 RMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCL 418
GR +A ++ M GRG+ P T+ +I G C GS ++ +F M +G P +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA--DDARKLFYEMQTSGNYPDSV 269
Query: 419 SFDKMVEKLCE-NRDVEQANANLTRLLDK-GFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
+ + +++ C+ R VE L RL +K GF+ G YS LI G + +LY
Sbjct: 270 AHNALLDGFCKLGRMVEAFE--LLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
M K++ P + ++T +IQ L + GK+EDA K L +M S+ ++PD Y +I + +G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 537 --NNARVLQLCNEMASLE 552
R LQL EM+ E
Sbjct: 388 LLEEGRSLQL--EMSETE 403
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 191/489 (39%), Gaps = 73/489 (14%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHR 156
F G+R YS I L RA T A L ++ KN P +
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII------------------- 339
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
+ +L+Q +K E A + ++ ++G +N+V+ L + +
Sbjct: 340 -LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M ++P+A T I+I ++C+ GL++ + I E ++S SPS ++LI +
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREA----EEIFTEIEKSGCSPSVATFNALIDGLC 454
Query: 277 EKGHLVEEE---GKRE--RVAVMVVTL-----------------------LKRLLQQNLV 308
+ G L E K E R A + + L L
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSS 514
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD V Y+++++ R G +D AL++ + + G P+S Y + G + GR +EA +L
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM--VEK 426
+ P V S R + L F + SCL + +E+
Sbjct: 575 FYAKDDFRHSP------AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQ 628
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETT---YSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+ + E+A L RL++ E T Y++ + G G E L ++ + K +
Sbjct: 629 CFKEGETERA---LRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKI 685
Query: 484 CPGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRL-LTPDVAIY--ETMIASHEQKGNNA 539
+I LC+ +L+ A E +L T+ + L P V Y +++ S E+
Sbjct: 686 LVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKM---E 742
Query: 540 RVLQLCNEM 548
V QL N M
Sbjct: 743 IVSQLTNRM 751
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 201/492 (40%), Gaps = 91/492 (18%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
S ++ + V Q L +K P D L FF W + F+H +S+ + + L RA +
Sbjct: 63 SQTISRTTVLQTLRLIKVPADG---LRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNV 118
Query: 120 ARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVC 179
AR L S+ + R G V+ + D ++ L+++Y L + + +
Sbjct: 119 ARNFLFSI--ERRSNGCVK-LQDRYFNS--------------LIRSYGNAGLFQESVKLF 161
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCK 238
++ G S+ +FNS+L +L + R + D+++ M R P++ T +I+ CK
Sbjct: 162 QTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCK 221
Query: 239 EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTL 298
+ VD RI + +
Sbjct: 222 NSM----VDEAFRIFKDME----------------------------------------- 236
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV--MSGFEPNSFVYTSFTGGF 356
L N PD V Y+ I+ R G + A + M+ + PN YT+ G+
Sbjct: 237 ---LYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGY 291
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG---- 412
C + IDEA+ + M RGLKP T++ +I G + R +E + + ++G
Sbjct: 292 CMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH-RYDE---IKDILIGGNDAFT 347
Query: 413 -FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
F P +F+ +++ C+ ++ A +L+ P +YS+LI+ + E
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 472 LKLYYEMEYKSMC-------PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
L+ E+ K + P + + + + LC GK + AEK + + R + D
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPS 466
Query: 525 YETMIASHEQKG 536
Y+T+I H ++G
Sbjct: 467 YKTLITGHCREG 478
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 8/264 (3%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS-GFEPNSFVYTSFTG 354
V L + + Q + P + ++ ++ ++ G A ++++EM + G P+S+ + +
Sbjct: 158 VKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLIN 217
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAML--GA 411
GFCK +DEA + + ME P T++ +I G C AG ++ V ML
Sbjct: 218 GFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH--NVLSGMLKKAT 275
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
P+ +S+ +V C +++++A +L +G P TY+ LIKG + E+
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Query: 472 LKLYY--EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ + + P F +I+ C G L+ A K + M + L PD A Y +I
Sbjct: 336 KDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Query: 530 ASHEQKGNNARVLQLCNEMASLEL 553
+ + R L NE+ E+
Sbjct: 396 RTLCMRNEFDRAETLFNELFEKEV 419
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 92/470 (19%), Positives = 178/470 (37%), Gaps = 82/470 (17%)
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP------------------GAVR 138
FN +RSY AGL ++ L +++ P G
Sbjct: 141 FNSLIRSYG-------NAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 193
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
+ D + G S+ + L+ + K + + AF + ++E + ++N+++
Sbjct: 194 DLFDEMRRTYGVTPDSY--TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRN--YPNAVTLKIMIDALCKEGLLQRNV----DALDR- 251
L R+ +V + +V M++ +PN V+ ++ C + + V D L R
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 252 ----------------------------IMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
I G ++ +P A + LI + GHL
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD- 370
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL----EMYEEMVM 339
A M V + +L L PDS YS+++ D A E++E+ V+
Sbjct: 371 --------AAMKV--FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 340 SGFE---PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
G + P + Y C G+ +A ++ R + RG++ ++ +I G G
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD-PPSYKTLITG-HCREG 478
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+ + + ML F+P +++ +++ L + + A+ L R+L +LP TT+
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 538
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
++ A + E L M K + + + T V++ L + E A
Sbjct: 539 SVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKA 588
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 95/499 (19%), Positives = 179/499 (35%), Gaps = 99/499 (19%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRP 157
N V +Y+ I L RAG + A +L G ++ TD + V + +
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLS---------GMLKKATDVHPNVVSYTT----- 286
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
LV+ Y + + A V ++ +RG + + ++N+++ L + R + D+ +
Sbjct: 287 ----LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI---L 339
Query: 218 IRGRNY-----PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
I G + P+A T I+I A C G L + ++ + + +++ +L
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
Query: 273 LR------------MVEKGHLVEEE-------------------GKRERVAVMVVTLLKR 301
+R + EK L+ ++ GK ++ + L+KR
Sbjct: 400 MRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR 459
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+Q D Y ++ R G A E+ M+ F P+ Y G K G
Sbjct: 460 GVQ-----DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGE 514
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAA---------------------------- 393
A + ++ M P TF V+ A
Sbjct: 515 ALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQ 574
Query: 394 ------GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
S + E+ + + G++ + ++++ LCENR + A+ + L+K
Sbjct: 575 VVRLLFSSAQKEKAFLIVRLLYDNGYL---VKMEELLGYLCENRKLLDAHTLVLFCLEKS 631
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
+ T + +I+G E LY E+ LS + L GK E+ +
Sbjct: 632 QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 691
Query: 508 KYLKTMKSRLLTPDVAIYE 526
K M + + D ++ E
Sbjct: 692 FVSKRMATLRESDDCSVLE 710
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 165/368 (44%), Gaps = 26/368 (7%)
Query: 166 YAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS----DRVSLVWDVYEHMIRGR 221
Y K+ + + F+ A G+ ++ +F++++ RS + +S+ + E+ +R
Sbjct: 246 YGKVTIAKRIFETAF---AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLR-- 300
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PN VT +IDA K G+ + V + E +R+ P I +SL L + +G L
Sbjct: 301 --PNLVTYNAVIDACGKGGMEFKQVA---KFFDEMQRNGVQPDRITFNSL-LAVCSRGGL 354
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E L + + + D Y+ ++ A + G +D A E+ +M +
Sbjct: 355 WE----------AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
PN Y++ GF K GR DEA+ L M G+ +++ ++ GR EE
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN-TLLSIYTKVGRSEEA 463
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L + M G ++++ ++ + ++ T + + LP TYS LI G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
Y+ G +E ++++ E + + + +++++I LC+ G + A + M ++P+
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 522 VAIYETMI 529
V Y ++I
Sbjct: 584 VVTYNSII 591
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 158/355 (44%), Gaps = 17/355 (4%)
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV-TLKIMIDALCKEGLLQRNVDALDRIM 253
++++ L R +V++ ++E G Y N V +I A + GL + + + +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAG-GYGNTVYAFSALISAYGRSGLHEEAISVFNSM- 294
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
K P+ + +++I + GK V + + + PD +
Sbjct: 295 ---KEYGLRPNLVTYNAVI----------DACGKGGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++ ++ R G ++A +++EM E + F Y + CK G++D A E++ M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
+ + P ++ VI G A +GR +E L +F M G +S++ ++ +
Sbjct: 402 VKRIMPNVVSYSTVIDGFAK-AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
E+A L + G TY+ L+ GY +G+ EV K++ EM+ + + P L ++++
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
I + G ++A + + KS L DV +Y +I + + G + L +EM
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 169/413 (40%), Gaps = 39/413 (9%)
Query: 71 VLLELKDPNDAKTALSFFHWSAK-THRFNHGVRSYSIAIHVLVRAGLITDARALLESLAA 129
++ EL + N+ A+ F+ ++ K R N + S I L R G +T A+ + E+ A
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 130 KNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL--VQTYA---KMRLTEAAFDVCCN--- 181
G +LI A G SG H + + ++ Y + A D C
Sbjct: 262 GGY--GNTVYAFSALISAYG-RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 182 -----------VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK 230
++ G + +FNS+L V R ++++ M R + +
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
++DA+CK G +D I+ + P+ + S++I + G E
Sbjct: 379 TLLDAICKGG----QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE------- 427
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+ L + + D V Y+ ++ ++G + AL++ EM G + + Y
Sbjct: 428 ----ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
+ GG+ K+G+ DE ++ M+ + P T+ +I G + G G +E + +F
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG-GLYKEAMEIFREFKS 542
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
AG + + +++ LC+N V A + + + +G P TY+ +I +
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 107/238 (44%), Gaps = 2/238 (0%)
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
S ++ R G + A ++E G+ + +++ + + G +EA+ + M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
GL+P T++ VI C G ++ F+ M G P ++F+ ++ +C +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 435 QANANL-TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
+A NL + ++ +Y+ L+ G++ ++ +M K + P + +++V
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
I + G+ ++A M+ + D Y T+++ + + G + L + EMAS+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 51/333 (15%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR--AVTDSLIDAVGFVSG 153
R V SY+ + + + G + A +L + K P V V D A F
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 154 SH-------------RPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV 200
+ R + L+ Y K+ +E A D+ + + G + + ++N++L
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 201 LQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSS 260
+ + V V+ M R PN +T +ID K GL + ++ I E K +
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME----IFREFKSAG 544
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA 320
++ S+LI + + G + V+L+ + ++ + P+ V Y+ I+ A
Sbjct: 545 LRADVVLYSALIDALCKNG-----------LVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 321 KVRLGSLD---------------SALEMYEEM----VMSGFEPNSFVYTSFTGGFCKEG- 360
R ++D SAL E V+ F + + T C+EG
Sbjct: 594 FGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM 653
Query: 361 -RIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
+ +E+ R M +KP TF ++ C+
Sbjct: 654 QELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 194/463 (41%), Gaps = 44/463 (9%)
Query: 36 DVAAAICDSFRRRRSWD-AVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKT 94
++A + R R+ W + F S + D L LL K N+ +L FF W
Sbjct: 49 EMAKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELL--KSQNNVLFSLWFFRWLCSN 106
Query: 95 HRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGS 154
+ + G S +I L+ D AV+A S +D GF
Sbjct: 107 YDYTPGPVSLNILFGALL--------------------DGKAVKAA-KSFLDTTGF--KP 143
Query: 155 HRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVY 214
+L+ V+ ++ L E A +V ++ G S+ + NSVL ++ ++ W+++
Sbjct: 144 EPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELH 203
Query: 215 EHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILR 274
+ M+ ++ ++ +I ALC G + + L + + + P V + LI
Sbjct: 204 KEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGL----KQGLDPGQYVYAKLISG 257
Query: 275 MVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMY 334
E G+ + +L ++ N P Y I+ A ++
Sbjct: 258 FCEIGNYA-----------CMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 335 EEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAG 394
+ + G+ P+ VYT+ GFC++G + A +L M +G++P E +V+I
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRP-NEFAYNVMIHGHFK 365
Query: 395 SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT 454
G + + ML G+ + LS + M++ C + ++A + + G P T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 455 YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
Y+ LIKG+ + +V++ LKLY E++ + P + ++++ L
Sbjct: 426 YNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 144/372 (38%), Gaps = 70/372 (18%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P V+L I+ AL ++ LD + P + + + E+G LVE
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDT-------TGFKPEPTLLEQYVKCLSEEG-LVE 162
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG-----SLDSALEMYEEMV 338
E A+ V +LK + + S++ V LG LD E+++EMV
Sbjct: 163 E-------AIEVYNVLKDM--------GISSSVVTCNSVLLGCLKARKLDRFWELHKEMV 207
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGR 397
S F+ C G + E EL++ +GL P + +I G C G+
Sbjct: 208 ESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGN-- 263
Query: 398 LEECLG-VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
C+ V M+ PS + K+++ LC N+ +A L DKG+ P Y+
Sbjct: 264 -YACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF-------------------------- 490
+I+G+ KG + KL++EM K M P +
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 491 ---------TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
++I+ C GK ++A + K M +TP+ Y +I ++ +
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 542 LQLCNEMASLEL 553
L+L E+ +L L
Sbjct: 443 LKLYKELKALGL 454
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 141/343 (41%), Gaps = 27/343 (7%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL---------R 274
P L+ + L +EGL++ ++ + + K S S + +S++L R
Sbjct: 143 PEPTLLEQYVKCLSEEGLVEEAIEVYNVL----KDMGISSSVVTCNSVLLGCLKARKLDR 198
Query: 275 MVE-KGHLVEEEGKRERVAVMV------------VTLLKRLLQQNLVPDSVGYSLIVHAK 321
E +VE E ER+ ++ LLK+ L+Q L P Y+ ++
Sbjct: 199 FWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
+G+ E+ M+ P+ ++Y G C + EA + + ++ +G P
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
+ +I G G L ++ M+ G P+ +++ M+ + ++ A
Sbjct: 319 VVYTTMIRGFCE-KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
+L G+ + + +IKG+ + G+ E +++ M + P + ++I+ C+
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
K+E K K +K+ L P Y ++ + + + A L L
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 128/257 (49%), Gaps = 3/257 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
LL +++ P++V Y+ ++H+ R L A+ ++ +M +G EP+ Y +
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
K G +D AM++ + M+ GL P +TF + VII C +G L +F M+G G P+
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSP--DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++F+ M+ + R+ E A + + GF P + TYS++++ G ++E ++
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
EM+ K+ P V+ ++ + G ++ A ++ + M L P+V +++++ +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 537 NNARVLQLCNEMASLEL 553
+ L M +L L
Sbjct: 619 RMSEAYNLLQSMLALGL 635
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 12/282 (4%)
Query: 249 LDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLV 308
+++++ E R P+ + + LI +L E + + ++ +
Sbjct: 378 INKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE-----------AMNVFNQMQEAGCE 426
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD V Y ++ + G LD A++MY+ M +G P++F Y+ K G + A L
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRL 486
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
M G+G P TF+ ++I A + E L ++ M AGF P +++ ++E L
Sbjct: 487 FCEMVGQGCTPNLVTFN-IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+E+A + K ++P E Y LL+ + G V + + Y M + P +
Sbjct: 546 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
S++ R ++ +A L++M + L P + Y +++
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 147/369 (39%), Gaps = 42/369 (11%)
Query: 44 SFRRRRSWDAVSRK----FGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNH 99
S RR W + + FG ++ QVL ++ ++ AL FF+W + F H
Sbjct: 302 SILRRFKWGHAAEEALHNFG-FRMDAYQANQVLKQM---DNYANALGFFYWLKRQPGFKH 357
Query: 100 GVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS------- 152
+Y+ + L RA + LL+ + P V + LI + G +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTV--TYNRLIHSYGRANYLKEAMN 415
Query: 153 ----------GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
R L+ +AK + A D+ ++ G +++ +++ L
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLG 475
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
++ + ++ M+ PN VT IMI K RN + ++ + + +
Sbjct: 476 KAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA----RNYETALKLYRDMQNAGFQ 531
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P + S ++ + G L E EG + + ++N VPD Y L+V
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEG-----------VFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
+ G++D A + Y+ M+ +G PN S F + R+ EA L++ M GL P +
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 383 TFDHVIIGC 391
T+ ++ C
Sbjct: 641 TYTLLLSCC 649
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 133/311 (42%), Gaps = 16/311 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
GF+ ++ +++ L R+ + + + + M+R PN VT +I + + L+
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
++ +++ + + P + +LI + G L + + + +R+ +
Sbjct: 414 MNVFNQM----QEAGCEPDRVTYCTLIDIHAKAGFLD-----------IAMDMYQRMQEA 458
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
L PD+ YS+I++ + G L +A ++ EMV G PN + K + A
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 518
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
++L R M+ G +P T+ +++ G LEE GVF M ++P + +V+
Sbjct: 519 LKLYRDMQNAGFQPDKVTYS-IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
+ +V++A +L G P T + L+ + + E L M + P
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Query: 486 GLSVFTSVIQC 496
L +T ++ C
Sbjct: 638 SLQTYTLLLSC 648
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G K G T+ ++G + + E + + M+ G P+ +++++++ +++
Sbjct: 354 GFKHDGHTYT-TMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A ++ + G P TY LI +A G + + +Y M+ + P ++ +I
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
CL + G L A + M + TP++ + MIA H + N L+L +M
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 208/512 (40%), Gaps = 87/512 (16%)
Query: 63 LNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFN--HGVRSYSIAIHVLVRAGLITDA 120
L+ +L + E+ D + F W + N H +Y++ L +AGL A
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 121 RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYA---KMRLTEA--- 174
+ E + + P + +L LV ++A K+ A
Sbjct: 123 GQMFECMKSDGVSP--------------------NNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 175 -AFDV--CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
+F+V CC V NS+L+ L + DRV +++ +R ++ + T I
Sbjct: 163 QSFEVEGCCMV-----------VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI 211
Query: 232 MIDALCKEGLLQRNVDALDRIMG---------------------ERKRSSH--------- 261
+I LC G ++ ++ L + G E ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 262 --SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
SP + +S+I + G + E +LL +L+ + P +V ++++V
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREAS-----------SLLDDMLRLGIYPTNVTFNVLVD 320
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ G + +A E+ +M+ G P+ +TS G+C+ G++ + L M RG+ P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T+ ++I RL + + + IP ++ +++ C+ V +AN
Sbjct: 381 NAFTYS-ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ + K P + T+++LI G+ KG + E + ++++M P +S++ CL +
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
G ++A +L + + + +V ET A+
Sbjct: 500 AGMAKEA-YHLNQIARKGQSNNVVPLETKTAN 530
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 36/343 (10%)
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL------ 281
T ++ +LCK GL D ++ K SP+ + L+ EKG L
Sbjct: 105 TYNLLTRSLCKAGLH----DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 282 ----VEEEGKRERVAVMVVTLLK--------RLLQQNL----VPDSVGYSLIVHAKVRLG 325
E EG V ++ TL+K +L ++L D+ +++++ +G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 326 SLDSALEMYEEMVMSGF--EPNSFVYTSFTGGFCKEGRIDEAMELMRGME-GRGLKPYGE 382
+ ALE+ VMSGF EP+ Y + GFCK +++A E+ + ++ G P
Sbjct: 221 KAEKALELLG--VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 383 TFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
T+ +I G C AG ++ E + + ML G P+ ++F+ +V+ + ++ A
Sbjct: 279 TYTSMISGYCKAG--KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
+++ G P T++ LI GY G+V + +L+ EM + M P ++ +I LC
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG--NNARVL 542
+L A + L + S+ + P +Y +I + G N A V+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 208/512 (40%), Gaps = 87/512 (16%)
Query: 63 LNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFN--HGVRSYSIAIHVLVRAGLITDA 120
L+ +L + E+ D + F W + N H +Y++ L +AGL A
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 121 RALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYA---KMRLTEA--- 174
+ E + + P + +L LV ++A K+ A
Sbjct: 123 GQMFECMKSDGVSP--------------------NNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 175 -AFDV--CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
+F+V CC V NS+L+ L + DRV +++ +R ++ + T I
Sbjct: 163 QSFEVEGCCMV-----------VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI 211
Query: 232 MIDALCKEGLLQRNVDALDRIMG---------------------ERKRSSH--------- 261
+I LC G ++ ++ L + G E ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 262 --SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
SP + +S+I + G + E +LL +L+ + P +V ++++V
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREAS-----------SLLDDMLRLGIYPTNVTFNVLVD 320
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
+ G + +A E+ +M+ G P+ +TS G+C+ G++ + L M RG+ P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T+ ++I RL + + + IP ++ +++ C+ V +AN
Sbjct: 381 NAFTYS-ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ + K P + T+++LI G+ KG + E + ++++M P +S++ CL +
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
G ++A +L + + + +V ET A+
Sbjct: 500 AGMAKEA-YHLNQIARKGQSNNVVPLETKTAN 530
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 36/343 (10%)
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL------ 281
T ++ +LCK GL D ++ K SP+ + L+ EKG L
Sbjct: 105 TYNLLTRSLCKAGLH----DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 282 ----VEEEGKRERVAVMVVTLLK--------RLLQQNL----VPDSVGYSLIVHAKVRLG 325
E EG V ++ TL+K +L ++L D+ +++++ +G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 326 SLDSALEMYEEMVMSGF--EPNSFVYTSFTGGFCKEGRIDEAMELMRGME-GRGLKPYGE 382
+ ALE+ VMSGF EP+ Y + GFCK +++A E+ + ++ G P
Sbjct: 221 KAEKALELLG--VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 383 TFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
T+ +I G C AG ++ E + + ML G P+ ++F+ +V+ + ++ A
Sbjct: 279 TYTSMISGYCKAG--KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
+++ G P T++ LI GY G+V + +L+ EM + M P ++ +I LC
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG--NNARVL 542
+L A + L + S+ + P +Y +I + G N A V+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
P+ Y++++ R G LD LE+++EM G + F YT+ + + GR + ++EL
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG------------------------- 403
+ M+ + P T++ VI CA G E LG
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 404 ----------VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
VF M G +P ++ +VE + R +E+ L + G LP T
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
+Y++L++ YA G ++E + ++++M+ P + ++ ++ + G+ +D + M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 514 KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
KS PD A Y +I + G V+ L ++M
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 19/308 (6%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGER-KRSSHSPSAIVNSSLILRMVEKGHLV 282
PN IMI L +EGLL + ++ D + + RS S +A++N+
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY------------ 186
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG-SLDSALEMYEEMVMSG 341
G+ R + LL R+ + + P + Y+ +++A R G + L ++ EM G
Sbjct: 187 ---GRNGRYET-SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+P+ Y + G DEA + R M G+ P T+ H ++ RLE+
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH-LVETFGKLRRLEKV 301
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ M G +P S++ ++E ++ +++A ++ G P TYS+L+
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ G +V +L+ EM+ + P + + +I+ G ++ M + PD
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 522 VAIYETMI 529
+ YE +I
Sbjct: 422 METYEGII 429
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 159/390 (40%), Gaps = 53/390 (13%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
LV+T+ K+R E D+ + + G + S+N +L +S + V+ M
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PNA T ++++ + G D + ++ E K S+ P A + LI E G+
Sbjct: 348 CTPNANTYSVLLNLFGQSG----RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E VVTL ++++N+ PD Y I+ A + G + A ++ + M +
Sbjct: 404 KE-----------VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
P+S YT F + +EA+ M G P ETF ++ A G
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG------- 505
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
G+ V+++ A L+RL+D G T++ I+
Sbjct: 506 -GL----------------------------VKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 462 YAAKGEVQEVLKLYYEMEYKSMC-PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
Y G+ +E +K Y +ME KS C P +V+ +++ + + MK+ + P
Sbjct: 537 YKQGGKFEEAVKTYVDME-KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+ Y M+A + + V +L EM S
Sbjct: 596 SIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 186/433 (42%), Gaps = 31/433 (7%)
Query: 123 LLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVL---DLLVQTYAKMRLTEAAFDVC 179
L+ L + R P ++ ++LI+ H+P L LV + + + +
Sbjct: 325 LMNGLIERGR-PQEAHSIFNTLIEE------GHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE 239
VE G + FN++++ S + ++E M P A T +I K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 240 GLLQRNVDALDRIMGER--KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT 297
G L+ + LD ++ + + + + + +V + R +E+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAW----------------N 481
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM-YEEMVMSGFEPNSFVYTSFTGGF 356
++ ++ + PD V ++ + A R+GS +A +M M+ + +PN + G+
Sbjct: 482 IVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGY 541
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
C+EG+++EA+ M+ G+ P F+ +I G ++ V + M G P
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNINDMDGVGEVVDLMEEFGVKPD 600
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++F ++ D+++ T +L+ G P +S+L KGYA GE ++ ++
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQK 535
+M + P + ++T +I C G+++ A + K M + L+P++ YET+I +
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEA 720
Query: 536 GNNARVLQLCNEM 548
+ +L +M
Sbjct: 721 KQPWKAEELLKDM 733
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 147/362 (40%), Gaps = 82/362 (22%)
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA 320
H PS I ++L+ + + H +++L+ ++ + L PD++ ++ I++A
Sbjct: 350 HKPSLITYTTLVTALTRQKHFHS-----------LLSLISKVEKNGLKPDTILFNAIINA 398
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF------------------------ 356
G+LD A++++E+M SG +P + + + G+
Sbjct: 399 SSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQP 458
Query: 357 ------------CKEGRIDEAMELMRGMEGRGLKPYGETFDHV----------------- 387
C + +I+EA ++ M+ G+KP TF+ +
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 388 ------------------IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
I+ G++EE L F M G P+ F+ +++
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
D++ + + + G P T+S L+ +++ G+++ ++Y +M + P +
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
F+ + + R G+ E AE+ L M+ + P+V IY +I+ G + +Q+ +M
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Query: 550 SL 551
+
Sbjct: 699 GI 700
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 130/257 (50%), Gaps = 3/257 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
LL +++ P++V Y+ ++H+ R L+ A+ ++ +M +G +P+ Y +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
K G +D AM++ + M+ GL P +TF + VII C +G L +F M+ G P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSP--DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++++ M++ + R+ + A + + GF P + TYS++++ G ++E ++
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
EM+ K+ P V+ ++ + G +E A ++ + M L P+V +++++ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 537 NNARVLQLCNEMASLEL 553
A +L M +L L
Sbjct: 624 KIAEAYELLQNMLALGL 640
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 244 RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
+ A+++++ E R P+ + + LI +L E + + ++
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE-----------AMNVFNQMQ 426
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ PD V Y ++ + G LD A++MY+ M G P++F Y+ K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A +L M +G P T++ +++ A + + L ++ M AGF P +++ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+E L +E+A A T + K ++P E Y LL+ + G V++ + Y M + +
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
P + S++ R K+ +A + L+ M + L P + Y T++ S G + +
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGRSKLDMG 664
Query: 544 LCNEM 548
C ++
Sbjct: 665 FCGQL 669
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 36/387 (9%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
LK ND AL FF+W + F H +Y+ + L RA LL+ + P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 135 GAVRAVTDSLIDAVGFVS-----------------GSHRPVLDLLVQTYAKMRLTEAAFD 177
V + LI + G + R L+ +AK + A D
Sbjct: 398 NTV--TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 178 VCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALC 237
+ ++A G +++ +++ L ++ + ++ M+ PN VT IM+D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 238 KEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT 297
K RN ++ + + + P + S ++ + G+L E E
Sbjct: 516 KA----RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA----------- 560
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ + Q+N +PD Y L+V + G+++ A + Y+ M+ +G PN S F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ +I EA EL++ M GL+P +T+ ++ C G +L+ +G ++ + P+
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD--MGFCGQLMASTGHPAH 678
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLL 444
+ KM + +V N L+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLM 705
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
LKR Q D Y+ +V R + ++ +EMV G +PN+ Y + +
Sbjct: 354 LKR--QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
++EAM + M+ G KP T+ +I A +G L+ + +++ M G P
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTY-CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ ++ L + + A+ ++D+G P TY++++ +A Q LKLY +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+ P ++ V++ L CG LE+AE M+ + PD +Y ++ + GN
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 539 ARVLQLCNEM 548
+ Q M
Sbjct: 591 EKAWQWYQAM 600
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 130/257 (50%), Gaps = 3/257 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
LL +++ P++V Y+ ++H+ R L+ A+ ++ +M +G +P+ Y +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
K G +D AM++ + M+ GL P +TF + VII C +G L +F M+ G P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSP--DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++++ M++ + R+ + A + + GF P + TYS++++ G ++E ++
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
EM+ K+ P V+ ++ + G +E A ++ + M L P+V +++++ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 537 NNARVLQLCNEMASLEL 553
A +L M +L L
Sbjct: 624 KIAEAYELLQNMLALGL 640
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 129/287 (44%), Gaps = 12/287 (4%)
Query: 244 RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
+ A+++++ E R P+ + + LI +L E + + ++
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE-----------AMNVFNQMQ 426
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ PD V Y ++ + G LD A++MY+ M G P++F Y+ K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A +L M +G P T++ +++ A + + L ++ M AGF P +++ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+E L +E+A A T + K ++P E Y LL+ + G V++ + Y M + +
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
P + S++ R K+ +A + L+ M + L P + Y +++
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 36/387 (9%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
LK ND AL FF+W + F H +Y+ + L RA LL+ + P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 135 GAVRAVTDSLIDAVGFVS-----------------GSHRPVLDLLVQTYAKMRLTEAAFD 177
V + LI + G + R L+ +AK + A D
Sbjct: 398 NTV--TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 178 VCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALC 237
+ ++A G +++ +++ L ++ + ++ M+ PN VT IM+D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 238 KEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT 297
K RN ++ + + + P + S ++ + G+L E E
Sbjct: 516 KA----RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE-----------A 560
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ + Q+N +PD Y L+V + G+++ A + Y+ M+ +G PN S F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ +I EA EL++ M GL+P +T+ ++ C G +L+ +G ++ + P+
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD--MGFCGQLMASTGHPAH 678
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLL 444
+ KM + +V N L+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLM 705
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
LKR Q D Y+ +V R + ++ +EMV G +PN+ Y + +
Sbjct: 354 LKR--QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
++EAM + M+ G KP T+ +I A +G L+ + +++ M G P
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTY-CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ ++ L + + A+ ++D+G P TY++++ +A Q LKLY +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+ P ++ V++ L CG LE+AE M+ + PD +Y ++ + GN
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 539 ARVLQLCNEM 548
+ Q M
Sbjct: 591 EKAWQWYQAM 600
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 130/257 (50%), Gaps = 3/257 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
LL +++ P++V Y+ ++H+ R L+ A+ ++ +M +G +P+ Y +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDH-VIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
K G +D AM++ + M+ GL P +TF + VII C +G L +F M+ G P+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSP--DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
++++ M++ + R+ + A + + GF P + TYS++++ G ++E ++
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
EM+ K+ P V+ ++ + G +E A ++ + M L P+V +++++ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 537 NNARVLQLCNEMASLEL 553
A +L M +L L
Sbjct: 624 KIAEAYELLQNMLALGL 640
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 129/287 (44%), Gaps = 12/287 (4%)
Query: 244 RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
+ A+++++ E R P+ + + LI +L E + + ++
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE-----------AMNVFNQMQ 426
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ PD V Y ++ + G LD A++MY+ M G P++F Y+ K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A +L M +G P T++ +++ A + + L ++ M AGF P +++ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
+E L +E+A A T + K ++P E Y LL+ + G V++ + Y M + +
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
P + S++ R K+ +A + L+ M + L P + Y +++
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 36/387 (9%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
LK ND AL FF+W + F H +Y+ + L RA LL+ + P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 135 GAVRAVTDSLIDAVGFVS-----------------GSHRPVLDLLVQTYAKMRLTEAAFD 177
V + LI + G + R L+ +AK + A D
Sbjct: 398 NTV--TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 178 VCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALC 237
+ ++A G +++ +++ L ++ + ++ M+ PN VT IM+D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 238 KEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVT 297
K RN ++ + + + P + S ++ + G+L E E
Sbjct: 516 KA----RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE-----------A 560
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ + Q+N +PD Y L+V + G+++ A + Y+ M+ +G PN S F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ +I EA EL++ M GL+P +T+ ++ C G +L+ +G ++ + P+
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD--MGFCGQLMASTGHPAH 678
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLL 444
+ KM + +V N L+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLM 705
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
LKR Q D Y+ +V R + ++ +EMV G +PN+ Y + +
Sbjct: 354 LKR--QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
++EAM + M+ G KP T+ +I A +G L+ + +++ M G P
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTY-CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
++ ++ L + + A+ ++D+G P TY++++ +A Q LKLY +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+ P ++ V++ L CG LE+AE M+ + PD +Y ++ + GN
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 539 ARVLQLCNEM 548
+ Q M
Sbjct: 591 EKAWQWYQAM 600
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 179/439 (40%), Gaps = 43/439 (9%)
Query: 48 RRSWDAVSRKFGSLEL------NDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGV 101
+ SW F L L N +V +L L N A+ F + T V
Sbjct: 168 QESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT--VGDRV 225
Query: 102 RSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDL 161
+ Y+ + V R+G + A+ L++++ + P + ++LI+A SG P L
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS--FNTLINA-RLKSGGLTPNL-- 280
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
A ++ V G R ++N++L R + V+E M R
Sbjct: 281 -------------AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ T MI + GL +R+ E + P A+ +SL+
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEA----ERLFMELELKGFFPDAVTYNSLLYAFA----- 378
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV-MS 340
RER V + +++ + D + Y+ I+H + G LD AL++Y++M +S
Sbjct: 379 ------RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G P++ YT K R EA LM M G+KP +T+ +I G A +G+ EE
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK-AGKREE 491
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
F ML +G P L++ M++ L + +A ++ G P T Y L+I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 461 GYAAKGEVQEVLKLYYEME 479
G + ++ K +ME
Sbjct: 552 GLMKENRSDDIQKTIRDME 570
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 23/348 (6%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G RV + +N+++ V RS + S ++ + M + P+ ++ +I+A K G L N
Sbjct: 222 GDRVQV--YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 246 --VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLL 303
V+ LD + + S P AI ++L+ +L +G V + + +
Sbjct: 280 LAVELLDMV----RNSGLRPDAITYNTLLSACSRDSNL---DG--------AVKVFEDME 324
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
PD Y+ ++ R G A ++ E+ + GF P++ Y S F +E +
Sbjct: 325 AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG-AGFIPSCLSFDK 422
+ E+ + M+ G T++ II G+L+ L +++ M G +G P +++
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYN-TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 423 MVEKLCE-NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+++ L + NR VE A A ++ +LD G P TYS LI GYA G+ +E + M
Sbjct: 444 LIDSLGKANRTVEAA-ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
P ++ ++ L R + A + M S TP +YE MI
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 198/526 (37%), Gaps = 106/526 (20%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS 152
+ HR + +Y+ I V R GL +A L L K P DAV + S
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP-----------DAVTYNS 372
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
L+ +A+ R TE +V ++ GF ++N+++H+ + ++ L
Sbjct: 373 ---------LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 213 VYEHM--IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSS 270
+Y+ M + GRN P+A+T ++ID+L G R V+A +M E P+ S+
Sbjct: 424 LYKDMKGLSGRN-PDAITYTVLIDSL---GKANRTVEAA-ALMSEMLDVGIKPTLQTYSA 478
Query: 271 LILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSA 330
LI + G E E +L+ PD++ YS+++ +R A
Sbjct: 479 LICGYAKAGKREEAEDT-----------FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 331 LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR-GLKPY--------G 381
+Y +M+ G P+ +Y G KE R D+ + +R ME G+ P G
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKG 587
Query: 382 ETFDHV---------------------IIGCAAGSGRLEECLGVFE-------------- 406
E FD I+G + SGR E + E
Sbjct: 588 ECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLIT 647
Query: 407 --------------AMLGAGFIPSCLS---------FDKMVEKLCENRDVEQANANLTRL 443
A L F C+ ++ ++ N +A+ + L
Sbjct: 648 EALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDL 707
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS-VFTSVIQCLCRCGK 502
G E+ ++ Y G + ++ + E K S ++T +I+ +
Sbjct: 708 RLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKL 767
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ AE + ++ TPD+ + ++++++ Q G R + N M
Sbjct: 768 WQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
++E GK +++ +++ L Q PD ++ ++ A + G + A ++ M+
Sbjct: 758 IIEAYGK-QKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G P C +GR++E ++ ++ G K + +++ A +G + E
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI-LLMLDAFARAGNIFE 875
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
++ +M AG++P+ + M+E LC+ + V A ++ + + F ++ ++K
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
Y A + ++ +++Y ++ + P + + ++I CR + E+ ++ M++ L P
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+ Y+++I++ ++ + QL E+ S
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE-PNSFVYTSFTGGFCKEGRIDEAMEL 368
+SV S++V +LG ++A ++ + GF S +YT + K+ +A +
Sbjct: 716 ESVCKSMVV-VYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESV 774
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+ + G P +T++ ++ A G E +F M+ G P+ S + ++ LC
Sbjct: 775 VGNLRQSGRTPDLKTWNS-LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC 833
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+ +E+ + L D GF +++ L++ +A G + EV K+Y M+ P +
Sbjct: 834 VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
++ +I+ LC+ ++ DAE + M+ ++AI+ +M+ + + + +Q+
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/397 (17%), Positives = 158/397 (39%), Gaps = 51/397 (12%)
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
P+ +++ Y K +L + A V N+ G L ++NS++ + ++
Sbjct: 753 PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M+R P ++ I++ ALC +G L
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRL---------------------------------- 838
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
E+ ++V EE + + ++L L++ A R G++ ++Y
Sbjct: 839 EELYVVVEELQDMGFKISKSSIL----------------LMLDAFARAGNIFEVKKIYSS 882
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M +G+ P +Y CK R+ +A ++ ME K ++ ++ A
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
++ + V++ + G P +++ ++ C +R E+ + ++ + G P TY
Sbjct: 943 -YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
LI + + +++ +L+ E+ K + S + ++++ G AEK L+ MK+
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+ P +A ++ S+ GN ++ + + E+
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 167/392 (42%), Gaps = 55/392 (14%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV-TLKIMIDALCKEGLLQRNVDALDRI 252
+N ++ + + + L W + + +++ RN ++ T I+I + GL V +R+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 253 MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSV 312
+ P I S +I + K E + + L+ PD +
Sbjct: 213 ----EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS------------LKDRFEPDVI 256
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ +V R G + A ++++EM ++G EPN + Y+ C+ G+I A ++ M
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD----------- 421
G P TF++ ++ +GR E+ L V+ M G P ++++
Sbjct: 317 LDSGCAPNAITFNN-LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 422 ---------KMVEKLCE---------------NRDVEQANANLTRLLDKGFLPGETTYSL 457
M++K CE RDV A+ +++++ P TY++
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM-KSR 516
L++ + VLK+ EM+ K + P ++ + ++ C G +A K K M + +
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LTP +++YE ++A + G + +L +M
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
+ D A L+ M+ R ++ ETF ++I +G E + F M G +P ++F
Sbjct: 166 QFDLAWHLIDLMKSRNVEISIETFT-ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAF 224
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
++ L R +A + L D+ F P Y+ L++G+ GE+ E K++ EM+
Sbjct: 225 SIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
+ P + ++ VI LCRCG++ A M P+ + ++ H + G +
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 541 VLQLCNEMASL 551
VLQ+ N+M L
Sbjct: 344 VLQVYNQMKKL 354
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 45/338 (13%)
Query: 81 AKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAV 140
A A SFF + RF V Y+ + RAG I++A + + + +P
Sbjct: 237 ASEAQSFF--DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVY--T 292
Query: 141 TDSLIDAV---GFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSV 197
+IDA+ G +S +H D+L D C A +FN++
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADML--------------DSGCAPNA-------ITFNNL 331
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERK 257
+ V ++ R V VY M + P+ +T +I+A C++ L+ V L+ ++ K
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI---K 388
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
+ ++ N+ I R +EK V + + ++++ P++V Y+++
Sbjct: 389 KKCEVNASTFNT--IFRYIEKKRDVNGAHR----------MYSKMMEAKCEPNTVTYNIL 436
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRG 376
+ V S D L+M +EM EPN Y FC G + A +L + M E +
Sbjct: 437 MRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC 496
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
L P ++ +++ +G+L++ + E M+ G +
Sbjct: 497 LTPSLSLYE-MVLAQLRRAGQLKKHEELVEKMIQKGLV 533
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V+LL+ + + +L+PD Y+ ++ L+ ALE+ EM SG + +
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
FCK G++DEAM ++ M+ GL+ + +I G G L+ +F+ +L G P
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG-FCDCGELDRGKALFDEVLERGDSP 280
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++++ ++ C+ +++A+ ++++G P TY+ LI G G+ +E L+L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
M K P + +I LC+ G + DA + ++ MK R PD Y ++ K
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 536 GN 537
G+
Sbjct: 401 GD 402
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 196/482 (40%), Gaps = 101/482 (20%)
Query: 141 TDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV 200
TD+ I+ FVS S L++ Y +MR T AF V + RGF ++ + N +L
Sbjct: 101 TDTFIN---FVSLSG------LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 201 LQRS-------------DRVSLVWDV--YEHMIRG----RNYPNA--------------- 226
L R+ R SL+ DV Y +IRG + A
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 227 -VTLKIMIDALCKEGLLQRNVDALDRIMG---ERKRSSHSPSAIVNSSLILRMVEKGHLV 282
VT I+IDA CK G +D MG E K +V +SLI + G L
Sbjct: 212 LVTWGILIDAFCKAG-------KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL- 263
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
+ GK L +L++ P ++ Y+ ++ +LG L A E++E M+ G
Sbjct: 264 -DRGK---------ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD----------------- 385
PN + YT G C G+ EA++L+ M + +P T++
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 386 -----------------HVIIGCAAGSGRLEECLGVFEAMLGAGFI--PSCLSFDKMVEK 426
++++G G L+E + ML P +S++ ++
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LC+ + QA L++K T ++L+ G+V + ++L+ ++ +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
+T++I C+ G L A+ L M+ L P V Y +++S ++G+ + +L
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 547 EM 548
EM
Sbjct: 554 EM 555
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 169/392 (43%), Gaps = 14/392 (3%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L++ + K+ + A ++ + RG R ++ ++ ++ L + + MI
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
PNAVT I+I+ LCK+GL+ V+ ++ + R R P I + L+ + KG L
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR----PDNITYNILLGGLCAKGDL 403
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
E + ++ +LK + PD + Y+ ++H + L AL++Y+ +V
Sbjct: 404 DE-------ASKLLYLMLKDSSYTD--PDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+ K G +++AMEL + + + +T+ +I G +G L
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK-TGMLNVA 513
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
G+ M + PS ++ ++ LC+ ++QA + P +++++I G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
G+++ L M + P L ++ +I + G L++A + M PD
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
I ++++ +G ++ +L ++ ++
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 1/261 (0%)
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
R R + + +++L+ + + V S ++ V++ A + M+ GF N +
Sbjct: 84 RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
+ G C+ +A+ L+R M L P +++ VI G G LE+ L +
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK-ELEKALELANE 202
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
M G+G S +++ +++ C+ +++A L + G Y+ LI+G+ GE
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
+ L+ E+ + P + ++I+ C+ G+L++A + + M R + P+V Y
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 528 MIASHEQKGNNARVLQLCNEM 548
+I G LQL N M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLM 343
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 182/461 (39%), Gaps = 54/461 (11%)
Query: 60 SLELNDSLVEQVLLEL------KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVR 113
+L + +L Q LL P A + F+W+A F H S+ L
Sbjct: 66 NLPHHQTLTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAA 125
Query: 114 AGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTE 173
D LL S A N P + F P+ + Y + R +
Sbjct: 126 THRFDDLYRLL-SFVAANPCPCSSGI----------FSCPELEPIFRSAIDAYCRARKMD 174
Query: 174 AA---FDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK 230
A FD + + ++ +N+V++ +S + Y+ M + R P+ T
Sbjct: 175 YALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFN 232
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
I+I+ C+ +D + E K P+ + ++LI + G + EEG +
Sbjct: 233 ILINGYCRSSKFDLALD----LFREMKEKGCEPNVVSFNTLIRGFLSSGKI--EEGVK-- 284
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+A ++ L R + ++V R G +D A + +++ P+ F Y
Sbjct: 285 MAYEMIELGCRFSEATC-------EILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA------GSGRLEECLGV 404
S C E + AME+M + +G P I C SGR E+ G
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTP-------CFIACTTLVEGLRKSGRTEKASGF 390
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL--DKGFLPGETTYSLLIKGY 462
E M+ AG +P ++F+ ++ LC + +AN RLL KG+ P ETTY +L+ G+
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSD--HSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
+G +E L EM K M P + + ++ L GK
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 15/316 (4%)
Query: 233 IDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
IDA C+ + + A D + ++ P+ V ++++ V+ G + +
Sbjct: 164 IDAYCRARKMDYALLAFDTM---KRLIDGKPNVGVYNTVVNGYVKSGDMDK--------- 211
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+ +R+ ++ PD ++++++ R D AL+++ EM G EPN + +
Sbjct: 212 --ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
GF G+I+E +++ M G + + E +++ GR+++ G+ +L
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCR-FSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
+PS + +VEKLC +A + L KG P + L++G G ++
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 473 KLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASH 532
+M + P F +++ LC DA + S+ PD Y +++
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 533 EQKGNNARVLQLCNEM 548
++G L NEM
Sbjct: 449 TKEGRRKEGEVLVNEM 464
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
Q ++ D V + IV + G+ +A ++ EM G PN Y FC GR
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
+A +L+R M + + P TF +I ++ E +++ ML P+ ++++ M
Sbjct: 63 DADQLLRHMIEKQINPDIVTFS-ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
++ C+ V+ A L + KG P T+S LI GY V ++++ EM + +
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+T++I C+ G L+ A+ L M S + PD + M+A
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
++D LCK+G +++A + E P+ + + +I G + +
Sbjct: 16 IVDRLCKDG---NHINA-QNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD------ 65
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
LL+ ++++ + PD V +S +++A V+ + A E+Y+EM+ P + Y S
Sbjct: 66 -----QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLG 410
GFCK+ R+D+A ++ M +G P TF +I G C A R++ + +F M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA--KRVDNGMEIFCEMHR 178
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
G + + +++ ++ C+ D++ A L ++ G P T+ ++ G +K E+++
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 471 VLKLYYEME 479
+ +++
Sbjct: 239 AFAILEDLQ 247
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
+PN +T MID+ C G + D L R M E++ +P + S+LI V++ +
Sbjct: 42 FPNVLTYNCMIDSFCHSGRWS-DADQLLRHMIEKQI---NPDIVTFSALINAFVKERKVS 97
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
E E + K +L+ ++ P ++ Y+ ++ + +D A M + M G
Sbjct: 98 EAE-----------EIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 146
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEEC 401
P+ +++ G+CK R+D ME+ M RG+ T+ +I G C G L+
Sbjct: 147 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--LDAA 204
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
+ M+ G P ++F M+ LC +++ +A A L L
Sbjct: 205 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ +F+++++ + +VS ++Y+ M+R +P +T MID CK Q VD
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK----QDRVDDAK 135
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
R++ SP + S+LI G+ + KR + + + R + +V +
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLI-----NGYC---KAKRVDNGMEIFCEMHR---RGIVAN 184
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
+V Y+ ++H ++G LD+A ++ EM+ G P+ + G C + + +A ++
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 371 GME 373
++
Sbjct: 245 DLQ 247
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 1/214 (0%)
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
M S + + + T+ CK+G A L M +G+ P T++ +I SG
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYN-CMIDSFCHSG 59
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
R + + M+ P ++F ++ + R V +A +L P TY+
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
+I G+ + V + ++ M K P + F+++I C+ ++++ + M R
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+ + Y T+I Q G+ L NEM S
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D Y LI+ + + G LD+A +++++M P+ V++S K GR+D +M++
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M+G G +P F +I A +G+L+ L +++ M +GF P+ + ++E +
Sbjct: 372 MEMQGFGHRPSATMFVS-LIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ +E A + GFLP +TYS L++ +A G+V +K+Y M + PGLS
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
+ S++ L ++ A K L MK+ + DV
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 174/419 (41%), Gaps = 52/419 (12%)
Query: 39 AAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFN 98
A I + +R + + + L+ ++V + LK + ALS F W+ K +
Sbjct: 144 AKIVEVVQRWKWGPELETQLDKLQFVPNMV-HITQSLKIVKEVDAALSLFRWAKKQPWYL 202
Query: 99 HGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPV 158
Y + L + ++L E + + G D +A V
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHG------DLSFNAYNQV------- 249
Query: 159 LDLLVQTYAKMRLTEAAFDVCCNVEAR--GFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
+Q AK E AF CC +A+ G ++ ++N+++ + +++YE
Sbjct: 250 ----IQYLAKAEKLEVAF--CCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M + + + T +++I +L K G L DA ++ + K PS V SSL+ M
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRL----DAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 277 EKGHL-------VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
+ G L +E +G R P + + ++ + + G LD+
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHR------------------PSATMFVSLIDSYAKAGKLDT 401
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
AL +++EM SGF PN +YT K G+++ AM + + ME G P T+ ++
Sbjct: 402 ALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYS-CLL 460
Query: 390 GCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
AGSG+++ + ++ +M AG P S+ ++ L R V+ A L + G+
Sbjct: 461 EMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 313 GYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
Y+ ++ + L+ A +++ SG + ++ Y + F +G +A E+ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
E G T++ +II A SGRL+ +F+ M PS F +V+ + +
Sbjct: 305 EKTDSLLDGSTYE-LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
++ + + G P T + LI YA G++ L+L+ EM+ P ++T
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+I+ + GKLE A K M+ P + Y ++ H G +++ N M +
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 20/353 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI-RGRNYPNAVTLKIMIDALCKEGLLQR 244
GFR + +FN V+ +L + + W + MI + PN VT +I+ L+Q
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
+DA D++ R S +V++ + E H+VE E + K ++
Sbjct: 136 AIDAYDKLDDFNLRDETSFYNLVDA-----LCEHKHVVEAEE---------LCFGKNVIG 181
Query: 305 QNL-VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
V ++ ++LI+ +LG E +++M G + F Y+ + CK G+
Sbjct: 182 NGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPW 241
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
+A++L + M+ R +K ++ VI A G +E + VF M G P+ + + +
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG-VEFGIRVFREMRERGCEPNVATHNTI 300
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
++ LCE+ + A L + +G P TY L ++ + E+L L+ M +
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGV 357
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
P + + +++ R G L+ KTMK TPD A Y +I + QKG
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/452 (19%), Positives = 168/452 (37%), Gaps = 91/452 (20%)
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
ND + AL FF+W + F H +++ I +L + + AL+ +
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGN-------- 110
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
T+S+ + V F ++ + Y L + A D ++ R + +N V
Sbjct: 111 --TESVPNHVTF---------RIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVD 159
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNY-------PNAVTLKIMIDALCKEGLLQRNVDALDR 251
+ + V E + G+N N +++ K G + + +
Sbjct: 160 ALCEHKHVVEA-----EELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKK 214
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
+ E + + S+ + ++ K GK + V L K + + + D
Sbjct: 215 MDTE-----GVTKDLFSYSIYMDIMCKS------GKPWKA----VKLYKEMKSRRMKLDV 259
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
V Y+ ++ A ++ + ++ EM G EPN + + C++GR+ +A ++
Sbjct: 260 VAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDE 319
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLE---ECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
M RG +P D + C RLE E L +F
Sbjct: 320 MPKRGCQP-----DSITYMCLF--SRLEKPSEILSLF----------------------- 349
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
R++ G P TY +L++ + G +Q VL ++ M+ P +
Sbjct: 350 ------------GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
+ +VI L + G L+ A +Y + M R L+P
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 143/347 (41%), Gaps = 23/347 (6%)
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP----NAVTLKIMIDALCKEGLL 242
F SL S++ ++ +L S + +L+WD +I R Y ++ I+ A + L
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDF---LIEAREYNYFEISSKVFWIVFRAYSRANLP 154
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
A +R++ P L+ + +K H+ + +
Sbjct: 155 SEACRAFNRMV----EFGIKPCVDDLDQLLHSLCDKKHVNHAQ-----------EFFGKA 199
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+VP + YS++V R+ A ++++EM+ + Y + CK G +
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
D ++ + M GLKP +F + I +G + V + M +P+ +F+
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSF-AIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
+++ LC+N V+ A L ++ KG P TY+ ++ + EV KL M+
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
P + V++ L R G+ + A + + M R P VA Y MI
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 188/462 (40%), Gaps = 73/462 (15%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
S ++ +LVEQVL K N A FF W+ + F H + SY H+LV +
Sbjct: 63 SPRVSSNLVEQVLKRCK--NLGFPAHRFFLWARRIPDFAHSLESY----HILVEILGSSK 116
Query: 120 ARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVC 179
ALL D LI+A
Sbjct: 117 QFALL----------------WDFLIEAR------------------------------- 129
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE 239
E F +S F V R++ S + M+ P L ++ +LC
Sbjct: 130 ---EYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCD- 185
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
+++V+ G+ K PSA S L+ +G R R A +
Sbjct: 186 ---KKHVNHAQEFFGKAKGFGIVPSAKTYSILV-----RG------WARIRDASGARKVF 231
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
+L++N V D + Y+ ++ A + G +D +M++EM G +P+++ + F +C
Sbjct: 232 DEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDA 291
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
G + A +++ M+ L P TF+H II + ++++ + + M+ G P +
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPNVYTFNH-IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ ++ C++ +V +A L+R+ LP TY++++K G +++ M
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410
Query: 480 YKSMCPGLSVFTSVIQCLCR-CGKLEDAEKYLKTMKSRLLTP 520
+ P ++ +T +I L R GKLE+A +Y + M + P
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 7/271 (2%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
LVE G ++ A++ L++ S + ++ A R A + MV
Sbjct: 108 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 167
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G +P C + ++ A E +G G+ P +T+ ++ G A R+ +
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA----RIRD 223
Query: 401 CLG---VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
G VF+ ML + L+++ +++ LC++ DV+ + + G P ++++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
I Y G+V K+ M+ + P + F +I+ LC+ K++DA L M +
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
PD Y +++A H R +L + M
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%)
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
E F M+ G P D+++ LC+ + V A + G +P TYS+L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
+G+A + K++ EM ++ L + +++ LC+ G ++ K + M + L
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
PD + I ++ G+ ++ + M +L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 18/354 (5%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLL-QR 244
G + S+N+++ L + V ++ M + PN VT I++ ALC++G++
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
N L+ I+ + +++P IV ++++ K V V + + K + Q
Sbjct: 246 NKKLLEEILDSSQ--ANAPLDIVICTILMDSCFKNGNV----------VQALEVWKEMSQ 293
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+N+ DSV Y++I+ G++ +A +MV G P+ F Y + CKEG+ DE
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIG-CAAGS-GRLEECLGVFEAMLGAGFIPSCLSFDK 422
A +L M+ G+ P ++ +I G C G R E +ML + +P L ++
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE---FLLSMLKSSLLPEVLLWNV 410
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
+++ D A + L +L G P T + LI GY G + + + EM
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ P + + ++ C G L A + M R PD+ Y ++ KG
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 139/328 (42%), Gaps = 18/328 (5%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN V+ +I LC NVD + + P+ + + ++ + +KG +
Sbjct: 189 PNCVSYNTLIKGLCS----VNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 284 EEGKRERVAVMVVTLLKRLL---QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
K LL+ +L Q N D V ++++ + + G++ ALE+++EM
Sbjct: 245 NNKK----------LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
+S VY G C G + A M M RG+ P T++ +I G+ +E
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN-TLISALCKEGKFDE 353
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
+ M G P +S+ +++ LC + DV +AN L +L LP ++++I
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
GY G+ L + M + P + ++I + G+L DA M+S + P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
D Y ++ + G+ QL +EM
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEM 501
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 162/369 (43%), Gaps = 31/369 (8%)
Query: 192 ASFNSVLHVLQRS-DRVSLVWDVYEHMIRGRNYPNAVTLKI---MIDALCKEGLLQRNVD 247
A FN + ++L+ S DR++ + E + + +++ L I ++ LC +G
Sbjct: 86 AIFNVLDYILKSSLDRLA---SLRESVCQTKSFDYDDCLSIHSSIMRDLCLQG------- 135
Query: 248 ALDRIMGERKRSSHS---PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
LD + RK+ +S P I ++ L+ + + G++ + +G L++ + +
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADG-----------LVREMRE 184
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI-D 363
P+ V Y+ ++ + ++D AL ++ M G PN C++G I +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 364 EAMELMRGM--EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+L+ + + P +++ +G + + L V++ M + ++
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ LC + ++ A + ++ +G P TY+ LI +G+ E L+ M+
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
+ P + +IQ LC G + A ++L +M L P+V ++ +I + + G+ +
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 542 LQLCNEMAS 550
L + N M S
Sbjct: 425 LSVLNLMLS 433
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 145/363 (39%), Gaps = 75/363 (20%)
Query: 79 NDAKTALSFFHWSAKTHRFNHGVR----SYSIAIHVLVRAGLI-TDARALLESLAAKNRD 133
N+ AL F+ K +G+R + +I +H L + G+I + + LLE + ++
Sbjct: 205 NNVDKALYLFNTMNK-----YGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 134 PGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTE------------------AA 175
+ V +++ F +G+ L++ + K + AA
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 176 FDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDA 235
+ C++ RG + ++N+++ L + + D++ M G P+ ++ K++I
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 236 LCKEGLLQRN----------------------VDALDR---------IMGERKRSSHSPS 264
LC G + R +D R ++ P+
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 265 AIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRL 324
N++LI V+ G L++ + + + PD+ Y+L++ A L
Sbjct: 440 VYTNNALIHGYVKGGRLIDAWWVKNE-----------MRSTKIHPDTTTYNLLLGAACTL 488
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G L A ++Y+EM+ G +P+ YT G C +GR+ +A L+ ++ G+ T
Sbjct: 489 GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI-----TI 543
Query: 385 DHV 387
DHV
Sbjct: 544 DHV 546
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 157/378 (41%), Gaps = 20/378 (5%)
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE 239
C ++ + L+ +S++ L ++ + + MI P +T +++ LCK
Sbjct: 110 CQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKA 169
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
G +++ D ++ E + SP+ + ++LI + ++ + + L
Sbjct: 170 GYIEK----ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDK-----------ALYLF 214
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS----FVYTSFTGG 355
+ + + P+ V ++IVHA + G + + + E ++ + N+ + T
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
K G + +A+E+ + M + + P +VII SG + G M+ G P
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNV-PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
+++ ++ LC+ ++A + + G P + +Y ++I+G G+V +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
M S+ P + ++ VI R G A L M S + P+V +I + +
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 536 GNNARVLQLCNEMASLEL 553
G + NEM S ++
Sbjct: 454 GRLIDAWWVKNEMRSTKI 471
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 195/509 (38%), Gaps = 132/509 (25%)
Query: 29 SNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFF 88
+N NA DD+ A+ +S S++L +V ++L L+ + KTA FF
Sbjct: 104 ANLNAYDDMEKALDES---------------SVDLTTPVVCKILQRLQ--YEEKTAFRFF 146
Query: 89 HWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAV 148
W+ ++H +Y+ I + L S KN+ V ID +
Sbjct: 147 TWAGHQEHYSHEPIAYNEMIDI-------------LSSTKYKNKQFRIV-------IDML 186
Query: 149 GFVSGSHRPVL--DLLVQT---YAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
++ +++ V+ D+L++ Y + LT HV +
Sbjct: 187 DYMKRNNKTVVLVDVLLEILRKYCERYLT--------------------------HVQKF 220
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
+ R IR + P +++DALCK GL++ GE
Sbjct: 221 AKR---------KRIRVKTQPEINAFNMLLDALCKCGLVKE---------GE-------- 254
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+L+ RM R RV PD+ ++++ R
Sbjct: 255 ------ALLRRM------------RHRVK----------------PDANTFNVLFFGWCR 280
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK---PY 380
+ A+++ EEM+ +G +P +F Y + FC+ G +DEA +L M +G P
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
+TF +I+ A + + EEC + M+ G +P ++ ++E +C V++A L
Sbjct: 341 AKTFALMIVA-LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+ +KG+ P TY+ ++ + E LKLY M P + + +I
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ A M R DV Y MI
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMI 488
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 165/369 (44%), Gaps = 24/369 (6%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK---IMIDALCKEGLL 242
G+ S S++ +L + + VW + E M R N P + + +++ ++
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM-RKTN-PELIEPELFVVLMRRFASANMV 183
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
++ V+ LD E + P V L+ + + G + E E
Sbjct: 184 KKAVEVLD----EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED------------ 227
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+++ P+ ++ +++ R G L A E+ +M +G EP+ V+T+ G+ G++
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
+A +LM M RG +P + +I R++E + VF M G +++
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
++ C+ +++ + L + KG +P + TY ++ + K + +E L+L +M+ +
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVL 542
P L ++ VI+ C+ G++++A + M++ L+P V + MI +G ++
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF---LI 464
Query: 543 QLCNEMASL 551
+ CN +
Sbjct: 465 EACNHFKEM 473
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 18/294 (6%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P+ ++DALCK G ++ + + R P+ +SL+ +G L+E
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDM-----REKFPPNLRYFTSLLYGWCREGKLME 254
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ +L ++ + L PD V ++ ++ G + A ++ +M GFE
Sbjct: 255 AK-----------EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFE 303
Query: 344 PNSFVYTSFTGGFCK-EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
PN YT C+ E R+DEAM + ME G + T+ +I G G +++
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW-GMIDKGY 362
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
V + M G +PS +++ +++ + E+ + ++ +G P Y+++I+
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLA 422
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
GEV+E ++L+ EME + PG+ F +I G L +A + K M SR
Sbjct: 423 CKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/375 (18%), Positives = 152/375 (40%), Gaps = 47/375 (12%)
Query: 95 HRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGS 154
+F +R ++ ++ R G + +A+ +L + +P D V F +
Sbjct: 230 EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEP-----------DIVVFTN-- 276
Query: 155 HRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD-RVSLVWDV 213
L+ YA A+D+ ++ RGF ++ + ++ L R++ R+ V
Sbjct: 277 -------LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 214 YEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL 273
+ M R + VT +I CK G++ + LD + ++ PS + +++
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD----DMRKKGVMPSQVTYMQIMV 385
Query: 274 RMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+K E + L++++ ++ PD + Y++++ +LG + A+ +
Sbjct: 386 AHEKKEQFEE-----------CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL---KPYGETFDHVIIG 390
+ EM +G P + GF +G + EA + M RG+ YG ++
Sbjct: 435 WNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTL--KSLLN 492
Query: 391 CAAGSGRLEECLGVFEAMLGAGFIPSC----LSFDKMVEKLCENRDVEQANANLTRLLDK 446
+LE V+ + + SC ++ + L V++A + +++
Sbjct: 493 NLVRDDKLEMAKDVWSCI--SNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEM 550
Query: 447 GFLPGETTYSLLIKG 461
+P TY+ L+KG
Sbjct: 551 DLMPQPNTYAKLMKG 565
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 168/372 (45%), Gaps = 30/372 (8%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+Q Y + R AFDV C + G ++ + ++N +L L + ++ V+E M +
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKAC---QVFEDMKKRH 265
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ T IMI + + G V + ++ E + +V + +++++ KG +
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN-----VVGYNTLMQVLAKGKM 320
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH---AKVRLGSLDSALEMYEEMV 338
V++ + + R+++ P+ YSL+++ A+ +L LD +E+ + +
Sbjct: 321 VDK----------AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV-IIGCAAGSGR 397
G +Y+ K G + EA L M +K GE ++ ++ G+G+
Sbjct: 371 TQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK--GERDSYMSMLESLCGAGK 422
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
E + + + G + + ++ + L + + + + ++ G P TY++
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNI 482
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
LI + GEV E + ++ E+E P + + S+I CL + G +++A K M+ +
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 518 LTPDVAIYETMI 529
L PDV Y T++
Sbjct: 543 LNPDVVTYSTLM 554
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/378 (18%), Positives = 152/378 (40%), Gaps = 33/378 (8%)
Query: 194 FNSVLHVLQRS---DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+N ++ +L RS DR V + + M++ + N T+ I+I LQ + +
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVK 195
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEK-----------GH---------LVEEEGKRER 290
+ + K +S + ++ + L R K GH L++ K E+
Sbjct: 196 K--WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK 253
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+ + KR ++ D Y++++ R+G D A+ ++ EM+ G N Y
Sbjct: 254 ACQVFEDMKKRHCRR----DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
+ K +D+A+++ M G +P T+ +++ G+L GV E +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS-LLLNLLVAEGQLVRLDGVVE--IS 366
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
++ + + +V L + V +A+ + +Y +++ G+ E
Sbjct: 367 KRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
+++ ++ K + ++ +V L + ++ + MK +PD+ Y +IA
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 531 SHEQKGNNARVLQLCNEM 548
S + G + + E+
Sbjct: 486 SFGRVGEVDEAINIFEEL 503
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
LVP+ V Y+ +V A +LG +D ++ + GFE + Y+++ G+ K G + +A+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
R M +G+ ++ +I G + G +EE LG+ M+ G P+ +++ ++
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSK-EGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LC+ +E+A R+L G E Y LI G KG + + +ME + + P
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
+ + +VI LC G++ +A++ S+ + DV Y T++ S+ + N VL++
Sbjct: 382 ILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 23/326 (7%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN VT ++ ALC+ G + D + R+ E + S+ I + G LV+
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE----GFEFDCVFYSNWIHGYFKGGALVD 260
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
A+M + ++++ + D V YS+++ + G+++ AL + +M+ G E
Sbjct: 261 --------ALMQD---REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV-IIGCAAGSGRLEECL 402
PN YT+ G CK G+++EA L + G++ + F +V +I G L
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEV--DEFLYVTLIDGICRKGNLNRAF 367
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+ M G PS L+++ ++ LC V +A+ + KG + TYS L+ Y
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSY 422
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
+ VL++ + L + +++ G +A+ + M LTPD
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 523 AIYETMIASHEQKGNNARVLQLCNEM 548
A Y TMI + + G L++ NE+
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 50/289 (17%)
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNL-VP-DSVGYSLIVHA 320
PS++ SLI R VEKG + + +L+ + +N+ P D+ S ++
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDN-----------AIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 321 KVRLGSLDSALEMYEEMVMSG-FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
++G + AL +E V SG PN YT+ C+ G++DE +L+R +E G +
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE- 239
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
FD C S + G F+ G + + + +MVEK NRDV
Sbjct: 240 ----FD-----CVFYSNWIH---GYFK---GGALVDALMQDREMVEK-GMNRDV------ 277
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+YS+LI G + +G V+E L L +M + + P L +T++I+ LC+
Sbjct: 278 -------------VSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
GKLE+A + S + D +Y T+I +KGN R + +M
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 148/354 (41%), Gaps = 28/354 (7%)
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL--------------DRIMGERKRSSHSP 263
+R + AV +IDALCK+G+L + L R + ++
Sbjct: 508 LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD 567
Query: 264 SAIV---------NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY 314
I+ NS + L M+ L+ + A+ V +++R P ++
Sbjct: 568 KGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILK 627
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
+L+ + L SLD+ L + + + YT G CKEG + +A+ L +
Sbjct: 628 TLVDN----LRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
RG+ T++ +I G G L E L +F+++ G +PS +++ +++ LC+
Sbjct: 684 RGVTLNTITYNSLINGLCQ-QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
A L ++ KG +P Y+ ++ GY G+ ++ +++ + P +S+I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ C+ G +E+A K + ++ D + +I KG L EM
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 34/302 (11%)
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
N +T +I+ LC++G L V+AL R+ + PS + LI + ++G ++
Sbjct: 689 NTITYNSLINGLCQQGCL---VEAL-RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
E LL ++ + LVP+ + Y+ IV +LG + A+ + +M P
Sbjct: 745 E-----------KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTP 793
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV 404
++F +S G+CK+G ++EA+ + + + + F +I G GR+EE G+
Sbjct: 794 DAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT-KGRMEEARGL 852
Query: 405 FEAMLGAGFIPSCL-----------SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
ML + + + S + +LCE V QA L + + G+
Sbjct: 853 LREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKN 912
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
S + +E+ K Y ++ S+ S + LC GKLE A +++ ++
Sbjct: 913 LGSYQRLQFLNDVNEEEIKKKDYVHDFHSL-------HSTVSSLCTSGKLEQANEFVMSV 965
Query: 514 KS 515
S
Sbjct: 966 LS 967
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/451 (19%), Positives = 187/451 (41%), Gaps = 37/451 (8%)
Query: 84 ALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAV------ 137
AL FF + + + +Y+ + L + G + + R L+ L + + V
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 138 ------RAVTDSLIDAVGFV-SGSHRPVLD--LLVQTYAKMRLTEAAFDVCCNVEARGFR 188
A+ D+L+ V G +R V+ +L+ +K E A + + G
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 189 VSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDA 248
+L ++ +++ L + ++ + ++ ++ + +ID +C++G L R
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 249 LDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLV 308
L G+ ++ PS + +++I + G + E + + + +V
Sbjct: 370 L----GDMEQRGIQPSILTYNTVINGLCMAGRVSEADE----------------VSKGVV 409
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
D + YS ++ + +++ ++D+ LE+ + + + + F G EA L
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
R M L P T+ +I G +G++EE L +F + + + + + ++++++ LC
Sbjct: 470 YRAMPEMDLTPDTATYATMIKG-YCKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALC 527
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+ ++ A L L +KG T L+ A G + +L L Y +E + L
Sbjct: 528 KKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
+ I LC+ G E A + M+ + LT
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 211/507 (41%), Gaps = 81/507 (15%)
Query: 98 NHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR--AVTDSLIDA----VGFV 151
N V SYSI I L + G + +A LL + + +P + A+ L FV
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 152 SGSHRPVLDLLVQTYAKMRLTEA---------AFDVCCNVEARGFRVSLASFNSVLHVLQ 202
+ + + V + + L + AF + ++E RG + S+ ++N+V++ L
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR--SS 260
+ RVS +V + ++ + +T ++D+ K +N+DA+ I R+R +
Sbjct: 394 MAGRVSEADEVSKGVV-----GDVITYSTLLDSYIK----VQNIDAVLEI---RRRFLEA 441
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA 320
P +V +++L+ L+ G+ + L + + + +L PD+ Y+ ++
Sbjct: 442 KIPMDLVMCNILLKAF---LLMGAYGEAD-------ALYRAMPEMDLTPDTATYATMIKG 491
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL--- 377
+ G ++ ALEM+ E+ S + Y CK+G +D A E++ + +GL
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 378 ---------KPYGETFDHVIIGCAAGSGRLEE--CLGVFEAMLGAGFIPSCL--SFDKMV 424
+ D I+G G +L CLG ML + C SF+ +
Sbjct: 551 IHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG----MLNDAILLLCKRGSFEAAI 606
Query: 425 EKLCENR----------DVEQANANLTRLLDKGFL---PGETT--------YSLLIKGYA 463
E R + + + R LD L GETT Y+++I G
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+G + + L L + + + + S+I LC+ G L +A + ++++ L P
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 524 IYETMIASHEQKGNNARVLQLCNEMAS 550
Y +I + ++G +L + M S
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVS 753
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 182/488 (37%), Gaps = 73/488 (14%)
Query: 51 WDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHV 110
W +S G+L+L+ ++E + L + A + VR+Y+ +H
Sbjct: 161 WLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLD-KIPLQEYLLDVRAYTTILHA 219
Query: 111 LVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMR 170
R G A L E + K P + ++D G + S R +L +L + MR
Sbjct: 220 YSRTGKYEKAIDLFERM--KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE----MR 273
Query: 171 LTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLK 230
FD T
Sbjct: 274 SKGLKFD------------------------------------------------EFTCS 285
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
++ A +EGLL+ + E K + P + ++L+ + G E
Sbjct: 286 TVLSACAREGLLREAKE----FFAELKSCGYEPGTVTYNALLQVFGKAGVYTE------- 334
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+++LK + + + DSV Y+ +V A VR G A + E M G PN+ YT
Sbjct: 335 ----ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
+ + K G+ DEA++L M+ G P T++ V + R E + + M
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV-LSLLGKKSRSNEMIKMLCDMKS 449
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQ-ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQ 469
G P+ +++ M+ LC N+ +++ N + GF P T++ LI Y G
Sbjct: 450 NGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 470 EVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ K+Y EM ++ + +++ L R G E + MKS+ P Y M+
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 530 ASHEQKGN 537
+ + GN
Sbjct: 569 QCYAKGGN 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 188/511 (36%), Gaps = 98/511 (19%)
Query: 105 SIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ 164
S + R GL+ +A+ L + +PG V + L+Q
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTV--------------------TYNALLQ 324
Query: 165 TYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP 224
+ K + A V +E ++N ++ R+ V E M + P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 225 NAVTLKIMIDALCKEGLLQR------------------NVDALDRIMGERKRSSH----- 261
NA+T +IDA K G +A+ ++G++ RS+
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 262 --------SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
SP+ ++++ KG + V + + + PD
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKG-----------MDKFVNRVFREMKSCGFEPDRDT 493
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++ ++ A R GS A +MY EM +GF Y + ++G ++ M+
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 374 GRGLKPYGETFDHVIIGCAAGSG----------RLEE-------------CLGVFE--AM 408
+G KP ET +++ C A G R++E L F+ A+
Sbjct: 554 SKGFKP-TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 409 LGA----------GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
G+ G+ P + F+ M+ N +QA L + + G P TY+ L
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ Y +GE + ++ +E + P L + +VI+ CR G +++A + L M R +
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
P + Y T ++ + G A + + MA
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 37/299 (12%)
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
RE + LL ++ Q + D Y+ I+HA R G + A++++E M G P
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 348 VYTSFTGGFCKEGR-IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
Y F K GR + + ++ M +GLK + E ++ A G L E F
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLK-FDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 407 AMLGAGFIPSCLSFD--------------------KMVEKLCENRDV------------- 433
+ G+ P ++++ +M E C V
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 434 --EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
++A + + KG +P TY+ +I Y G+ E LKL+Y M+ P +
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+V+ L + + + K L MKS +P+ A + TM+A KG + V ++ EM S
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/455 (18%), Positives = 174/455 (38%), Gaps = 50/455 (10%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y+ + VRAG +A ++E + K P A+ T +IDA G +G L L
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT--VIDAYG-KAGKEDEALKLF 409
Query: 163 VQ-----------TY-------AKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS 204
TY K + + C++++ G + A++N++L +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 205 DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPS 264
V V+ M P+ T +I A + G VDA ++ GE R+ +
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG---SEVDA-SKMYGEMTRAGFNAC 525
Query: 265 AIVNSSLILRMVEKGHLVEEEG------------KRERVAVMVVTLLK------------ 300
++L+ + KG E ++M+ K
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
R+ + + P + ++ A + +L + + G++P+ ++ S F +
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
D+A ++ + GL P T++ ++ G + + + + + P +S+
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNS-LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 421 DKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY 480
+ +++ C +++A L+ + ++G P TY+ + GY A G E+ + M
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 481 KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS 515
P F V+ CR GK +A ++ +K+
Sbjct: 765 NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 129/308 (41%), Gaps = 51/308 (16%)
Query: 177 DVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDAL 236
+V +++++GF+ + S++ +L + + + + G+ +P+ + L+ ++ A
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606
Query: 237 CKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV 296
K R + +R K+ + P ++ +S++ + EG
Sbjct: 607 FK----CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEG---------- 652
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
+L+ + + L PD V Y+ ++ VR G A E+ + + S +P+ Y + GF
Sbjct: 653 -ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 357 CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
C+ G + EA+ ++ M RG++P T++ + G A +G+F +
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA--------MGMFAEI-------- 755
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
+ ++E + +N D P E T+ +++ GY G+ E +
Sbjct: 756 ----EDVIECMAKN-DCR---------------PNELTFKMVVDGYCRAGKYSEAMDFVS 795
Query: 477 EMEYKSMC 484
+++ C
Sbjct: 796 KIKTFDPC 803
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 220/523 (42%), Gaps = 76/523 (14%)
Query: 22 HTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDA 81
++ FP+ N V ++ + S RS DA S+ +++ +V Q+L ++ D
Sbjct: 21 NSPFPQLCNVLLVASLSKTLSQS--GTRSLDA-----NSIPISEPVVLQILR--RNSIDP 71
Query: 82 KTALSFFHWSAKTHR-FNHGVRSYSIAIHVLVRAGLITDARALLESLAAK--NRDPGAVR 138
L FF W + H +YS + R GL+ + LL S+ N D +
Sbjct: 72 SKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAK 131
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
+ DSLI + F E+A V +E G ++ + ++SVL
Sbjct: 132 ILLDSLIRSGKF----------------------ESALGVLDYMEELGDCLNPSVYDSVL 169
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
L V +H +R + L I+ LL+ + + D G
Sbjct: 170 IAL-----------VKKHELR-------LALSILFK------LLEASDNHSDDDTGRVII 205
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
S+ P + + L++ + + E KR V LK + + D+ Y++ +
Sbjct: 206 VSYLPGTVAVNELLVGLRRAD--MRSEFKR------VFEKLKGMKRFKF--DTWSYNICI 255
Query: 319 HAKVRLGSLDSALEMYEEM------VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
H G LD+AL +++EM S F P+ Y S C G+ +A+ + +
Sbjct: 256 HGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDEL 315
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ G +P T+ +I GC S R+++ + ++ M GF+P + ++ +++ + R
Sbjct: 316 KVSGHEPDNSTYRILIQGCCK-SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
V +A +++ +G TY++LI G G + L+ +++ K F+
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPD-VAIYETMIASHEQ 534
V LCR GKLE A K ++ M++R + D V I +I H+Q
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQ 477
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD Y+ ++H G AL +++E+ +SG EP++ Y G CK R+D+AM +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
M+ G P ++ ++ G E C +FE M+ G SC +++ +++ L
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC-QLFEKMVQEGVRASCWTYNILIDGLF 405
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
N E L KG T+S++ +G+++ +KL EME + L
Sbjct: 406 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLV 465
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
+S++ + G+ + EK +K ++ L P+V
Sbjct: 466 TISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 185/455 (40%), Gaps = 45/455 (9%)
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEA--AFDVCCNVE 183
S K DP D + D +G + +H D L+ ++RL + + + C
Sbjct: 116 SFIQKETDP-------DKVADVLGALPSTHAS-WDDLINVSVQLRLNKKWDSIILVCEWI 167
Query: 184 AR--GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGL 241
R F+ + FN ++ + + +Y ++ R P T ++I A C GL
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 242 LQRNVDALDRIMGERKRSSHSPSAI----VNSSLILRMVEKGHLVE-----EEGKRERV- 291
++R + ++ E + SP I N+ + M KG+ E + KR+R
Sbjct: 228 IERA----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 292 ------------------AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ M L + P+ Y+ +V+A R G + A E+
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA 393
+E++ G EP+ +VY + + + G A E+ M+ G +P +++ +++
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN-IMVDAYG 402
Query: 394 GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
+G + VFE M G P+ S ++ + RDV + A + + + G P
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
+ ++ Y G+ ++ K+ EME +S + +I + G LE E+ +
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 514 KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
K + PDV + + I ++ +K + L++ EM
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 132/312 (42%), Gaps = 15/312 (4%)
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
+ + D + ++G + S ++N S+ LR+ +K + ++V + R
Sbjct: 121 ETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSI----------ILVCEWILR- 169
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+ + PD + ++L++ A + A +Y +++ S + P Y +C G I
Sbjct: 170 -KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 228
Query: 363 DEAMELMRGMEGRGLKP--YGET-FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
+ A ++ M+ + P G T ++ I G G EE + VF+ M P+ +
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ M+ + + + P TY+ L+ +A +G ++ +++ +++
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA 539
+ P + V+ ++++ R G A + M+ PD A Y M+ ++ + G ++
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 540 RVLQLCNEMASL 551
+ EM L
Sbjct: 409 DAEAVFEEMKRL 420
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 124/297 (41%), Gaps = 16/297 (5%)
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
++SS P I + LI +K E E +L +LL+ VP Y+L
Sbjct: 169 RKSSFQPDVICFNLLIDAYGQKFQYKEAE-----------SLYVQLLESRYVPTEDTYAL 217
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSF---VYTSFTGGFCK-EGRIDEAMELMRGM 372
++ A G ++ A + EM P + VY ++ G K +G +EA+++ + M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ KP ET++ ++I + + ++ M P+ ++ +V
Sbjct: 278 KRDRCKPTTETYN-LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
E+A +L + G P Y+ L++ Y+ G +++ M++ P + +
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
++ R G DAE + MK + P + + +++++ + + + + EM+
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 126/332 (37%), Gaps = 40/332 (12%)
Query: 81 AKTALSFFHWS----AKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGA 136
K + S+ W ++H+ + +Y+ ++ R GL A + E L +P
Sbjct: 297 GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 356
Query: 137 VRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
V + L+++Y++ A ++ ++ G AS+N
Sbjct: 357 Y--------------------VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++ R+ S V+E M R P + +++ A K R+V + I+ E
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK----ARDVTKCEAIVKEM 452
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ P V +S++ G + E +L + D Y++
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKME-----------KILAEMENGPCTADISTYNI 501
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+++ + G L+ E++ E+ F P+ +TS G + ++ + +E+ M G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
P G T ++ C++ ++E+ V M
Sbjct: 562 CAPDGGTAKVLLSACSS-EEQVEQVTSVLRTM 592
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+L++ + N+ D+V Y+L++ G L+ A + +EM G P+ YTS G+C
Sbjct: 152 VLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYC 211
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGS-GRLEECLGVFEAMLGAGFI- 414
G+ID+A L + M T+ ++ G C +G R E L E G G I
Sbjct: 212 NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLIS 271
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P+ +++ +++ CE R VE+A L R+ ++G +P T +LI+G E + L
Sbjct: 272 PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSK 331
Query: 475 YYEMEYKSMCPGLS-VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
+ K LS F+S L R + E+AEK + M R + PD
Sbjct: 332 LIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 181/498 (36%), Gaps = 103/498 (20%)
Query: 59 GSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVL-VRAGLI 117
+++L+ S + +VL DPN ++ L FF W+ H Y+ A +L +RA
Sbjct: 54 ANVQLDSSCINEVLRRC-DPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRA--- 109
Query: 118 TDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS-GSHRPVLDLLVQT-------YAKM 169
P ++ V +S FV+ + R VL L Q +
Sbjct: 110 ---------------KPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLR 154
Query: 170 RLTEAAFDVCCNVEARGFRVSLASFNSVLHV----LQRSDRVSLVWDVYEHMIRGRNYPN 225
+ E F+VC + A + L + L++ ++ D V L YP+
Sbjct: 155 KFPE--FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGL-------------YPD 199
Query: 226 AVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEE 285
+T MI+ C G +D R
Sbjct: 200 VITYTSMINGYCNAG----KIDDAWR---------------------------------- 221
Query: 286 GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG---- 341
L K + + + V +SV YS I+ + G ++ ALE+ EM
Sbjct: 222 ------------LAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGL 269
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
PN+ YT FC++ R++EA+ ++ M RG P T +I G ++
Sbjct: 270 ISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKAL 329
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
+ + ++ G + F L + E+A +L +G P S + +
Sbjct: 330 SKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRE 389
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGL--SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
+ LY E+E K + + + ++ LC+ G +A K K+M + +
Sbjct: 390 LCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMR 449
Query: 520 PDVAIYETMIASHEQKGN 537
V+ E +I + ++ G+
Sbjct: 450 LKVSHVEKIIEALKKTGD 467
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 185/455 (40%), Gaps = 45/455 (9%)
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEA--AFDVCCNVE 183
S K DP D + D +G + +H D L+ ++RL + + + C
Sbjct: 94 SFIQKETDP-------DKVADVLGALPSTHAS-WDDLINVSVQLRLNKKWDSIILVCEWI 145
Query: 184 AR--GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGL 241
R F+ + FN ++ + + +Y ++ R P T ++I A C GL
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 242 LQRNVDALDRIMGERKRSSHSPSAI----VNSSLILRMVEKGHLVE-----EEGKRERV- 291
++R + ++ E + SP I N+ + M KG+ E + KR+R
Sbjct: 206 IER----AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 292 ------------------AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEM 333
+ M L + P+ Y+ +V+A R G + A E+
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 334 YEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA 393
+E++ G EP+ +VY + + + G A E+ M+ G +P +++ +++
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN-IMVDAYG 380
Query: 394 GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
+G + VFE M G P+ S ++ + RDV + A + + + G P
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
+ ++ Y G+ ++ K+ EME +S + +I + G LE E+ +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 514 KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
K + PDV + + I ++ +K + L++ EM
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 132/312 (42%), Gaps = 15/312 (4%)
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
+ + D + ++G + S ++N S+ LR+ +K + ++V + R
Sbjct: 99 ETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSI----------ILVCEWILR- 147
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+ + PD + ++L++ A + A +Y +++ S + P Y +C G I
Sbjct: 148 -KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206
Query: 363 DEAMELMRGMEGRGLKP--YGET-FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
+ A ++ M+ + P G T ++ I G G EE + VF+ M P+ +
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ M+ + + + P TY+ L+ +A +G ++ +++ +++
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA 539
+ P + V+ ++++ R G A + M+ PD A Y M+ ++ + G ++
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 540 RVLQLCNEMASL 551
+ EM L
Sbjct: 387 DAEAVFEEMKRL 398
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 124/297 (41%), Gaps = 16/297 (5%)
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
++SS P I + LI +K E E +L +LL+ VP Y+L
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAE-----------SLYVQLLESRYVPTEDTYAL 195
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSF---VYTSFTGGFCK-EGRIDEAMELMRGM 372
++ A G ++ A + EM P + VY ++ G K +G +EA+++ + M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ KP ET++ ++I + + ++ M P+ ++ +V
Sbjct: 256 KRDRCKPTTETYN-LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
E+A +L + G P Y+ L++ Y+ G +++ M++ P + +
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
++ R G DAE + MK + P + + +++++ + + + + EM+
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 126/332 (37%), Gaps = 40/332 (12%)
Query: 81 AKTALSFFHWS----AKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGA 136
K + S+ W ++H+ + +Y+ ++ R GL A + E L +P
Sbjct: 275 GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 334
Query: 137 VRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNS 196
V + L+++Y++ A ++ ++ G AS+N
Sbjct: 335 Y--------------------VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 197 VLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGER 256
++ R+ S V+E M R P + +++ A K R+V + I+ E
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK----ARDVTKCEAIVKEM 430
Query: 257 KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
+ P V +S++ G + E +L + D Y++
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKME-----------KILAEMENGPCTADISTYNI 479
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+++ + G L+ E++ E+ F P+ +TS G + ++ + +E+ M G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 377 LKPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
P G T ++ C++ ++E+ V M
Sbjct: 540 CAPDGGTAKVLLSACSS-EEQVEQVTSVLRTM 570
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 198/452 (43%), Gaps = 43/452 (9%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
+K D + L F+ +++ FNH +YS+ + LVR A+L + +
Sbjct: 63 MKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYE---- 118
Query: 135 GAVRAVTDSLIDAVGFVSGS--HRPVLDL--LVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
R ++ + S S H V+++ L+Q A+++ + A C N+ V+
Sbjct: 119 -TCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVN 177
Query: 191 LAS------------------FNSVLHVLQRSDRVSLVWDVYEHMIR-GRNYPNAVTLKI 231
L+ FN ++ ++ ++ + V E M R G +YPN++T
Sbjct: 178 LSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 237
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
++D L + V+ + ++ + SP + + +I G + E K+
Sbjct: 238 LMDCLFAHSRSKEAVELFEDMIS---KEGISPDPVTFNVMINGFCRAGEV--ERAKK--- 289
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
+L + + P+ YS +++ ++G + A + ++E+ +G + ++ YT+
Sbjct: 290 ------ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 343
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
FC+ G DEAM+L+ M+ + T++ ++ G ++ GR EE L + +
Sbjct: 344 LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS-EGRSEEALQMLDQWGSE 402
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
G + S+ ++ LC N ++E+A L+ + ++G P T++ L+ G +
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
+++ + PG + +V++ +C+ KL
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G +PN+ ++ CK G I+ A ++ M+ G+ ++ C R +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 401 CLGVFEAMLGA-GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ +FE M+ G P ++F+ M+ C +VE+A L + G P YS L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G+ G++QE + + E++ + +T+++ C CR G+ ++A K L MK+
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
D Y ++ +G + LQ+ ++ S
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 3/248 (1%)
Query: 308 VP-DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
VP D + +++ + + G + +++++++M G E Y S + GR A
Sbjct: 181 VPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAK 240
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
M G++P T++ ++ G S RLE L FE M G P +F+ M+
Sbjct: 241 RYFNKMVSEGVEPTRHTYNLMLWGFFL-SLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C + +++A + P +Y+ +IKGY A V + L+++ EM + P
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP-DVAIYETMIASHEQKGNNARVLQLC 545
+ +++++ LC GK+ +A+ LK M ++ + P D +I+ ++ S + G+ A ++
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419
Query: 546 NEMASLEL 553
MA+L +
Sbjct: 420 KAMATLNV 427
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 202/523 (38%), Gaps = 58/523 (11%)
Query: 27 RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSL-----ELNDSLVEQVLLELKDPNDA 81
+ NH ++D + D+ R+W +R S+ E + SLV VL K
Sbjct: 80 KRQNHEKLEDTICRMMDN----RAW--TTRLQNSIRDLVPEWDHSLVYNVLHGAKK---L 130
Query: 82 KTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT 141
+ AL FF W+ ++ H ++ I +L + AR +L + K V
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK-----GVPWDE 185
Query: 142 DSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVL 201
D + +L+++Y K + + + + ++ G ++ S+NS+ V+
Sbjct: 186 DMFV---------------VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVI 230
Query: 202 QRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSH 261
R R + + M+ P T +M+ L ++ R + K
Sbjct: 231 LRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF----FLSLRLETALRFFEDMKTRGI 286
Query: 262 SPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAK 321
SP +++I + E E L + + P V Y+ ++
Sbjct: 287 SPDDATFNTMINGFCRFKKMDEAE-----------KLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 322 VRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
+ + +D L ++EEM SG EPN+ Y++ G C G++ EA +++ M + + P
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
+ ++ + +G + V +AM + ++E C+ +A L
Sbjct: 396 NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Query: 442 RLLDKGFL--------PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
L++K + + Y+ +I+ G+ + L+ ++ K ++
Sbjct: 456 TLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL-MKRGVQDQDALNNL 514
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
I+ + G + + + LK M R + + YE +I S+ KG
Sbjct: 515 IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKG 557
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+S+ LI H + GS+D A++++ ++ + G +++A
Sbjct: 116 ESLFMGLIQHYG-KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC-----LGVFEAMLGAGFIPSCLSFDKMV 424
G + L+P +F+ +I G L++C VF+ ML PS ++++ ++
Sbjct: 175 DGAKDMRLRPNSVSFNILI------KGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI 228
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
LC N D+ +A + L ++ K P T+ LL+KG KGE E KL ++MEY+
Sbjct: 229 GFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK 288
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
PGL + ++ L + G++++A+ L MK R + PDV IY ++
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 176/460 (38%), Gaps = 74/460 (16%)
Query: 72 LLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
L +LK+ D + ALS FH + F H SYS I+ L AK+
Sbjct: 53 LTDLKEIEDPEEALSLFH-QYQEMGFRHDYPSYSSLIYKL-----------------AKS 94
Query: 132 RDPGAVRAVTDSLIDAVGFVSGSHRPVLDL-LVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
R+ AV D ++ V + + R L + L+Q Y K + A DV + + +
Sbjct: 95 RNFDAV----DQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT 150
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALD 250
+ S N++++VL + + ++ R PN+V+ I+I LD
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF------------LD 198
Query: 251 RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPD 310
+ E + +L+ + P
Sbjct: 199 KCDWE--------------------------------------AACKVFDEMLEMEVQPS 220
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR 370
V Y+ ++ R + A + E+M+ PN+ + G C +G +EA +LM
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 371 GMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCEN 430
ME RG KP G +++ GR++E + M P + ++ +V LC
Sbjct: 281 DMEYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTE 339
Query: 431 RDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVF 490
V +A LT + KG P TY ++I G+ + L + M CP + F
Sbjct: 340 CRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATF 399
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
++ L + G L+ A L+ M + L+ ++ +++
Sbjct: 400 VCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 98/219 (44%), Gaps = 3/219 (1%)
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
+ AL ++ + GF + Y+S K D +++R + R ++ E+
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR-CRESLFMG 121
Query: 388 IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
+I +G +++ + VF + + + S + ++ L +N ++E+A + D
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 448 FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAE 507
P ++++LIKG+ K + + K++ EM + P + + S+I LCR + A+
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 508 KYLKTMKSRLLTPDVAIYETMIASHEQKG--NNARVLQL 544
L+ M + + P+ + ++ KG N A+ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/580 (21%), Positives = 214/580 (36%), Gaps = 126/580 (21%)
Query: 64 NDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARAL 123
+D +V +L D A AL F W++ F H +Y RAL
Sbjct: 43 DDHIVRLIL----DQKSASGALETFRWASTFPGFIHSRSTY----------------RAL 82
Query: 124 LESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVE 183
L R V + D + D++G + +++ + + RL + V V
Sbjct: 83 FHKLCVFRR-FDTVYQLLDEMPDSIGLPPDD--AIFVTIIRGFGRARLIKRVISVVDLVS 139
Query: 184 ARGFRVSLASFNSVLHVLQRSD-------------RVSLVWDVYEH--MIRGRNY----- 223
G + SL FNS+L VL + D + DVY + +++G +
Sbjct: 140 KFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG 199
Query: 224 ---------------PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
PNAV ++ ALCK G + R +M E K P+ +
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA----RSLMSEMKE----PNDVTF 251
Query: 269 SSLILRMVEKGHLVEEEGKRERV-------AVMVVT-----------------LLKRLLQ 304
+ LI + L++ E+ V+ VT +L+R+
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ D V + +V LG + A + EM G+ PN Y G+C G +D
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAML------GAGFIP--- 415
A++ M+ ++ TF+ +I G + G GR ++ L + E M GA P
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIG-GRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Query: 416 ------------SCLSFDKMVEK--------------LCENRDVEQANANLTRLLDKGFL 449
L F +EK LCE ++ +++ +G +
Sbjct: 431 VIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKY 509
P LI Y+ G+++E L+L +M + P S F +VI C+ K+ + K+
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 510 LKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
++ M R PD Y ++ KG+ + L + M
Sbjct: 551 VEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/400 (18%), Positives = 164/400 (41%), Gaps = 66/400 (16%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
+N++LH L ++ +V + M PN VT I+I A C E L +++ L++
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV--------AVMVVTLLK----- 300
P + + ++ + +G + E ERV V TL+K
Sbjct: 276 S----LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL 331
Query: 301 ---RLLQQNLV--------PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVY 349
R+ Q+ + P+ Y+L++ +G LDSAL+ + +M N +
Sbjct: 332 GKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF 391
Query: 350 TSFTGGFCKEGRIDEAMELMRGME------GRGLKPYG---------------------- 381
+ G GR D+ ++++ M+ G + PY
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Query: 382 -ETFDHVI-----IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
+ F + + G +++ ++ M+G G +PS + ++ + ++ +E+
Sbjct: 452 EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
+ + ++ +G+LP +T++ +I G+ + +V +K +M + P + +++
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLE 571
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
LC G ++ A M + + PD +++ +++ QK
Sbjct: 572 ELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 156/357 (43%), Gaps = 22/357 (6%)
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMG 254
N +LH L + +++ + E M R P+ + ++ L + +D LD+ M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLAR-------IDQLDKAMC 160
Query: 255 ERK---RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
+ S P I + +I + +KGH+ R A++ LL+ + PD
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHI--------RTALV---LLEDMSLSGSPPDV 209
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
+ Y+ ++ G+ + A+ +++ + +G P YT C+ A+E++
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
M G P T++ ++ G LEE V + +L G + ++++ ++ LC +
Sbjct: 270 MAVEGCYPDIVTYNS-LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
++ L + + P TY++LI G + + +Y+M + P + +
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN 388
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+V+ + + G ++DA + L +K+ P + Y ++I +KG + L+L ++M
Sbjct: 389 TVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 130/286 (45%), Gaps = 20/286 (6%)
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP--SAIVNS 269
+V E M YP+ VT +++ C+ G L+ + I+ SH + + +
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL------SHGLELNTVTYN 318
Query: 270 SLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
+L+ + + E E +L + Q + P + Y+++++ + L
Sbjct: 319 TLLHSLCSHEYWDEVE-----------EILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
A++ + +M+ P+ Y + G KEG +D+A+EL+ ++ P T++ VI
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 390 GCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL 449
G A G +++ L ++ ML AG P ++ ++ C VE+A L ++G
Sbjct: 428 G-LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNG 486
Query: 450 PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
+TY L+I+G K E++ +++ M P +++T++++
Sbjct: 487 IRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVK 532
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 185/444 (41%), Gaps = 31/444 (6%)
Query: 108 IHVLVRAGLITDARALLESLAAKNRDP------GAVRAVT--DSLIDA-----VGFVSGS 154
+H L G +TDA L+E +A N+ P VR + D L A V +SG
Sbjct: 111 LHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG 170
Query: 155 HRPVL--DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
+ ++++ K A + ++ G + ++N+V+ +
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
++ ++ P +T ++++ +C+ R ++ L+ + E P + +SL+
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE----GCYPDIVTYNSLV 286
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
+G+L E V ++++ +L L ++V Y+ ++H+ D E
Sbjct: 287 NYNCRRGNLEE-----------VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
+ M + + P Y G CK + A++ M + P T++ ++G
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN-TVLGAM 394
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
+ G +++ + + + P ++++ +++ L + +++A ++LD G P +
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKT 512
T LI G+ V+E ++ E + S + VIQ LC+ ++E A + ++
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 513 MKSRLLTPDVAIYETMIASHEQKG 536
M + PD IY ++ E+ G
Sbjct: 515 MLTGGCKPDETIYTAIVKGVEEMG 538
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 197/415 (47%), Gaps = 36/415 (8%)
Query: 117 ITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAF 176
++DA++L S+AA +R P ++ +S++ + G ++ V++ V+ + + ++
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLK-FHNSVLQSYGSIA-----VVNDTVKLFQHILKSQP-- 116
Query: 177 DVCCNVEARGFRVSLASFNSVL-HVLQRSDR-VSLVWDVYEHMIRGRNYPNAVTLKIMID 234
FR ++F +L H + D +S V V M+ P+ VT I +
Sbjct: 117 ---------NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM 294
+LC+ G VD +M E HSP + +L+ HL + K V
Sbjct: 168 SLCETG----RVDEAKDLMKELTEK-HSPPDTYTYNFLLK-----HLCK--CKDLHVVYE 215
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V ++ ++ PD V +++++ +L A+ + ++ +GF+P+ F+Y +
Sbjct: 216 FVDEMRDDF--DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
GFC + EA+ + + M+ G++P T++ +I G + +GR+EE + M+ AG+
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK-AGRVEEARMYLKTMVDAGYE 332
Query: 415 PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
P ++ ++ +C + A + L + +G P + TY+ L+ G + + ++L
Sbjct: 333 PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Query: 475 YYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRLLTPDVAIYETM 528
Y M+ + + + ++++ L + GK+ +A E + + S+ L+ D + Y T+
Sbjct: 393 YEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS-DASAYSTL 446
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 154/352 (43%), Gaps = 22/352 (6%)
Query: 200 VLQRSDRVSLVWD---VYEHMIRGR-NY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMG 254
VLQ +++V D +++H+++ + N+ P T I++ C+ ++ + R++
Sbjct: 91 VLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRVLN 148
Query: 255 ERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY 314
+ P + + + E G + E + L+K L +++ PD+ Y
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD-----------LMKELTEKHSPPDTYTY 197
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMS-GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
+ ++ + L E +EM +P+ +T C + EAM L+ +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 374 GRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G KP ++ ++ G C G E +GV++ M G P ++++ ++ L +
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKG--SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
VE+A L ++D G+ P TY+ L+ G KGE L L EME + P + +
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
++ LC+ ++ + + MKS + + Y T++ S + G A ++
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 295 VVTLLKRLL--QQNLVPDSVGYSLIVHAKVRL--GSLDSALEMYEEMVMSGFEPNSFVYT 350
V L + +L Q N P + +++ R S+ + + MV +G EP+
Sbjct: 104 TVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG------- 403
C+ GR+DEA +LM+ + + P T++ ++ L +C
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL-------KHLCKCKDLHVVYEF 216
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
V E P +SF +++ +C ++++ +A +++L + GF P Y+ ++KG+
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+ E + +Y +M+ + + P + ++I L + G++E+A YLKTM PD A
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y +++ +KG + L L EM
Sbjct: 337 TYTSLMNGMCRKGESLGALSLLEEM 361
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 163/396 (41%), Gaps = 46/396 (11%)
Query: 168 KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV 227
+MR+ +A V ++E G + +++++ +++ + DV+ M++ R N V
Sbjct: 304 EMRIEDAE-SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCV 362
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
+ ++ C+ G D R ++ V ++ + K VEE
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEF-----RETNISLDRVCYNVAFDALGKLGKVEE--- 414
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
+ L + + + + PD + Y+ ++ G A ++ EM +G P+
Sbjct: 415 -------AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
+Y GG G EA E ++ ME RG+KP T + VI G +G L++ +E+
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI-DAGELDKAEAFYES 526
Query: 408 M----------LGAGFIPS-CL--SFDKMVE---------------KLCENRD-VEQANA 438
+ + GF + CL +F++ + LC +D + +A
Sbjct: 527 LEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQD 586
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC 498
L R+ G P ++ Y LI + V++ + + + K + P L +T +I C
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQ 534
R + + A + MK R + PDV Y ++ S +
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 183/491 (37%), Gaps = 78/491 (15%)
Query: 104 YSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT---------------DSLIDAV 148
Y++A L + G + +A L + K P + T D +I+
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 149 GFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS---D 205
G + ++L A L + AF+ +E RG + + + N V+ L + D
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 206 RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSA 265
+ ++ EH R + M+ C G L + R+ P +
Sbjct: 519 KAEAFYESLEHKSRENDAS-------MVKGFCAAGCLDHAFERFIRL------EFPLPKS 565
Query: 266 IVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG 325
+ + EK ++ + + LL R+ + + P+ Y ++ A R+
Sbjct: 566 VYFTLFTSLCAEKDYISKAQD-----------LLDRMWKLGVEPEKSMYGKLIGAWCRVN 614
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
++ A E +E +V P+ F YT +C+ +A L M+ R +KP D
Sbjct: 615 NVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP-----D 669
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
V S + L + M IP + + M+ + C D+++ A +
Sbjct: 670 VVTYSVLLNS---DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKR 726
Query: 446 KGFLPGETTYSLLIKGYAAK----------------------------GEVQEVLKLYYE 477
+ +P TY++L+K + G++ E +++ +
Sbjct: 727 REIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
M + P + +T++I C C+ G L++A+ M + PDV Y +IA + G
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 538 NARVLQLCNEM 548
+ ++L EM
Sbjct: 847 VLKAVKLVKEM 857
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 150/403 (37%), Gaps = 52/403 (12%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
++Q Y +M A+D+ + +N L + +V +++ M
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ + +I C +G + DA D +M E + +P ++ + L + G
Sbjct: 427 IAPDVINYTTLIGGCCLQG---KCSDAFD-LMIEMDGTGKTPDIVIYNVLAGGLATNG-- 480
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM---- 337
+A LK + + + P V +++++ + G LD A YE +
Sbjct: 481 ---------LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 338 ------VMSGF-------------------EPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
++ GF P S +T FT ++ I +A +L+ M
Sbjct: 532 RENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G++P + +IG + + FE ++ +P ++ M+ C +
Sbjct: 592 WKLGVEPEKSMYGK-LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+QA A + + P TYS+L+ L + EME + P + +T
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTI 703
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
+I C L+ K MK R + PDV Y ++ + ++
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER 746
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/497 (20%), Positives = 198/497 (39%), Gaps = 54/497 (10%)
Query: 58 FGSLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLI 117
+ +LELND V +VL +KD D ALSF + + V++Y+ I ++ GL
Sbjct: 50 YKALELNDIGVLRVLNSMKD--DPYLALSFLK-RIEGNVTLPSVQAYATVIRIVCGWGLD 106
Query: 118 TDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDL---LVQTYAKMRLTEA 174
L L + D G +V D L+ A+G + S ++ + LV+ YA + + +
Sbjct: 107 KKLDTFLFELVRRG-DEGRGFSVMD-LLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDE 164
Query: 175 AFDVCCNV-EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMI 233
A D+ + G + + N ++ + S R +V + + R +A T +++
Sbjct: 165 AIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVV 224
Query: 234 DALCKEGLLQRNVDALDRIMGERKRSS---------------------------HSPSAI 266
AL + + L R++ R+ + +
Sbjct: 225 QALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANIL 284
Query: 267 VNSS---LILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
V+ S + R V +G E + V+ + + + PD YS I+ +
Sbjct: 285 VDKSDLGIAYRKVVRGLCYEMRIEDAESVVL------DMEKHGIDPDVYVYSAIIEGHRK 338
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
++ A++++ +M+ N + +S +C+ G EA +L + + +
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNI-----S 393
Query: 384 FDHVIIGCAAGS----GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
D V A + G++EE + +F M G G P +++ ++ C A
Sbjct: 394 LDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL 453
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ + G P Y++L G A G QE + ME + + P VI+ L
Sbjct: 454 MIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLID 513
Query: 500 CGKLEDAEKYLKTMKSR 516
G+L+ AE + ++++ +
Sbjct: 514 AGELDKAEAFYESLEHK 530
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 30/267 (11%)
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
L ++ +++ R + + ++E M R P+ VT +++++ E ++R ++A
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAF 692
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
D I P + + +I R L + V L K + ++ +VP
Sbjct: 693 DVI----------PDVVYYTIMINRYCHLNDLKK-----------VYALFKDMKRREIVP 731
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D V Y++++ K + EM +P+ F YT CK G + EA +
Sbjct: 732 DVVTYTVLLKNK-------PERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIF 784
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M G+ P + +I C G L+E +F+ M+ +G P + + ++ C
Sbjct: 785 DQMIESGVDPDAAPY-TALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYS 456
N V +A + +L+KG P + + S
Sbjct: 844 NGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
N+ + A FF T + + +Y+I I+ R A AL E + ++ P
Sbjct: 614 NNVRKAREFFEILV-TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP---- 668
Query: 139 AVTDSLIDAVGF-VSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSV 197
D V + V + P LD M+ AFDV +V + N
Sbjct: 669 -------DVVTYSVLLNSDPELD--------MKREMEAFDVIPDVVYYTIMI-----NRY 708
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERK 257
H+ + + V+ +++ M R P+ VT +++ E L R + A D
Sbjct: 709 CHL----NDLKKVYALFKDMKRREIVPDVVTYTVLLKNK-PERNLSREMKAFD------- 756
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
P + LI + G L E KR + ++++ + PD+ Y+ +
Sbjct: 757 ---VKPDVFYYTVLIDWQCKIGDL--GEAKR---------IFDQMIESGVDPDAAPYTAL 802
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
+ ++G L A +++ M+ SG +P+ YT+ G C+ G + +A++L++ M +G+
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 378 KP 379
KP
Sbjct: 863 KP 864
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 117/312 (37%), Gaps = 20/312 (6%)
Query: 245 NVDALDRIMGERKRSSHS----PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
N+D D + R+ +S P + LI RM+ G + MVV
Sbjct: 158 NLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGR-----------SDMVVGFFW 206
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEG 360
+ + L D+ Y L+V A R + ++ +++S Y +F G C
Sbjct: 207 EIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQ 266
Query: 361 RIDEAMELMRGMEGRGL----KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPS 416
D A L++ + + G + V+ G R+E+ V M G P
Sbjct: 267 MTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCY-EMRIEDAESVVLDMEKHGIDPD 325
Query: 417 CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYY 476
+ ++E +N ++ +A ++L K S +++ Y G E L+
Sbjct: 326 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFK 385
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
E ++ + L + GK+E+A + + M + + PDV Y T+I +G
Sbjct: 386 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQG 445
Query: 537 NNARVLQLCNEM 548
+ L EM
Sbjct: 446 KCSDAFDLMIEM 457
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 161/361 (44%), Gaps = 16/361 (4%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ Y K+ A V + G ++ S+ +++ R + + ++ M
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+A+T +I++ + + + + ++ E+K S P + +I +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMI-------Y 255
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ ++ G E+ + +++ + + Q+ +V Y+ ++ + S ++Y++M S
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQS----TVTYNSLMSFET---SYKEVSKIYDQMQRS 308
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
+P+ Y + + R +EA+ + M G++P + + ++++ A SG +E+
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY-NILLDAFAISGMVEQ 367
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
VF++M P S+ M+ D+E A R+ GF P TY LIK
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
GYA +V++++++Y +M + ++ T+++ RC A + K M+S + P
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Query: 521 D 521
D
Sbjct: 488 D 488
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 127/325 (39%), Gaps = 70/325 (21%)
Query: 294 MVVTLLKRLLQQNLVPDS-VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+V +L+ L QN S + + +++ A +LG+ + A + + G PN YT+
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD--------------------------- 385
+ + G+ + A + R M+ G +P T+
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 386 ----------HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD---------KMVEK 426
H++I +G E+ VF +M+G G S ++++ K V K
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300
Query: 427 LCEN-----------------------RDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ + R E+A + +LD G P Y++L+ +A
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G V++ ++ M + P L +T+++ +E AEK+ K +K P++
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y T+I + + + +++++ +M
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKM 445
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 190/482 (39%), Gaps = 35/482 (7%)
Query: 85 LSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSL 144
++ F W + Y++ I + R + AR L + + P A D+L
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDA--ETYDAL 184
Query: 145 IDAVGFVSGSHRPVL----DLLVQTYAKMRLT--------------EAAFDVCCNVEARG 186
I+A G +G R + D+L A R T A +VC + G
Sbjct: 185 INAHG-RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
L + N VL + + S +E M + P+ T I+I L K G + +
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQN 306
D + + KR+ P + +S++ HL +G+ E + + ++ +
Sbjct: 304 DLFNSM--REKRAECRPDVVTFTSIM-------HLYSVKGEIENCR----AVFEAMVAEG 350
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
L P+ V Y+ ++ A G +AL + ++ +G P+ YT + + + +A
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
E+ M KP T++ +I +G L E + +F M G P+ +S ++
Sbjct: 411 EVFLMMRKERRKPNVVTYN-ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
++ + L+ +G Y+ I Y E+++ + LY M K +
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
FT +I CR K +A YLK M+ + +Y +++ ++ ++G + N
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 547 EM 548
+M
Sbjct: 590 QM 591
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/498 (18%), Positives = 189/498 (37%), Gaps = 94/498 (18%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++ +H+ G I + RA+ E++ A+ P V +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS--------------------YN 359
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ YA ++ A V +++ G + S+ +L+ RS + +V+ M +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 221 RNYPNAVTLKIMIDALCKEGLLQR----------------------------------NV 246
R PN VT +IDA G L NV
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRM----VEKGHLVEEEGKRERV---AVMVVTLL 299
D + + + R + +A NS++ + +EK + + ++++V +V L+
Sbjct: 480 DTV--LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 300 KRLLQQNLVPDSVGY----------------SLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ + P+++ Y S ++ A + G + A ++ +M M+G E
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA-----GSGRL 398
P+ YTS + + +A EL ME G++P I C+A G
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS-------IACSALMRAFNKGGQ 650
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT--YS 456
+ V ++ IP + + C + +L +++D +LP + +
Sbjct: 651 PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDP-YLPSLSIGLTN 709
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
++ + G+V+ ++KL+Y++ + L + +++ L G + L+ M
Sbjct: 710 QMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 769
Query: 517 LLTPDVAIYETMIASHEQ 534
+ P +Y +I+ E+
Sbjct: 770 GIQPSNQMYRDIISFGER 787
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 161/361 (44%), Gaps = 16/361 (4%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
+L+ Y K+ A V + G ++ S+ +++ R + + ++ M
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+A+T +I++ + + + + ++ E+K S P + +I +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMI-------Y 262
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ ++ G E+ + +++ + + Q+ +V Y+ ++ + S ++Y++M S
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQS----TVTYNSLMSFET---SYKEVSKIYDQMQRS 315
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
+P+ Y + + R +EA+ + M G++P + + ++++ A SG +E+
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY-NILLDAFAISGMVEQ 374
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
VF++M P S+ M+ D+E A R+ GF P TY LIK
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
GYA +V++++++Y +M + ++ T+++ RC A + K M+S + P
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
Query: 521 D 521
D
Sbjct: 495 D 495
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 127/325 (39%), Gaps = 70/325 (21%)
Query: 294 MVVTLLKRLLQQNLVPDS-VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+V +L+ L QN S + + +++ A +LG+ + A + + G PN YT+
Sbjct: 128 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 187
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD--------------------------- 385
+ + G+ + A + R M+ G +P T+
Sbjct: 188 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 247
Query: 386 ----------HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD---------KMVEK 426
H++I +G E+ VF +M+G G S ++++ K V K
Sbjct: 248 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 307
Query: 427 LCEN-----------------------RDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ + R E+A + +LD G P Y++L+ +A
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G V++ ++ M + P L +T+++ +E AEK+ K +K P++
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y T+I + + + +++++ +M
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKM 452
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 155/362 (42%), Gaps = 18/362 (4%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
+N+ + L S R W+VYE M + YP+ VT I+I L K G + V + M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 254 GER--KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDS 311
E+ K S +V S +EG +E V+ + K+ ++ N +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFC------------DEGLKEEALVIQTEMEKKGIRSN----T 379
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
+ Y+ ++ A + ++ ++ EM G +P++ Y + + + D L+R
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
ME GL+P +++ +I + F M G PS S+ ++ +
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
E+A A+ + +G P TY+ ++ + G+ ++++++ M + + +
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASL 551
+++ + G +A + L P V Y ++ ++ + G +A++ QL EMA+L
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 552 EL 553
L
Sbjct: 620 NL 621
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 151/377 (40%), Gaps = 50/377 (13%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
LV+++ L E A + +E +G R + +N+++ +S+ + V ++ M
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+A T I++DA + + D ++ ++ E + P+ + LI
Sbjct: 410 LKPSAATYNILMDAYAR----RMQPDIVETLLREMEDLGLEPNVKSYTCLI--------- 456
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
G+ ++++ M R+ + L P S Y+ ++HA G + A +EEM G
Sbjct: 457 -SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+P+ YTS F + G + ME+ + M +K T++ ++ G A
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ------- 568
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
G++ E RDV ++ G P TY++L+
Sbjct: 569 -GLY----------------------IEARDV------VSEFSKMGLQPSVMTYNMLMNA 599
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
YA G+ ++ +L EM ++ P ++++I R + A Y K M PD
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 522 VAIYETMIASHEQKGNN 538
YE + A E K
Sbjct: 660 PRSYEKLRAILEDKAKT 676
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%)
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
+Y + G R D+A E+ M+ + P T +I +E +FE
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
M G S F +V+ C+ E+A T + KG Y+ L+ Y
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
++EV L+ EM K + P + + ++ R + + E L+ M+ L P+V Y
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 528 MIASH 532
+I+++
Sbjct: 455 LISAY 459
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 183/438 (41%), Gaps = 67/438 (15%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
++ L++Q Y KM + A + + +N L + RV +++ + M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
P+ + +ID C +G + +D +D ++G + SP I + L+ +
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG----NGMSPDLITYNVLVSGLAR 470
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA-----KVR-----LGSL 327
GH EEE V+ + +R+ + P++V S+I+ KV+ SL
Sbjct: 471 NGH--EEE---------VLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 328 D--------SALEMYEEMVMSGFEPNSFV----------YTSFTGGFCKEGRIDEAMELM 369
+ S ++ Y E +S +FV Y C EG +++A +++
Sbjct: 520 EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVL 579
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
+ M ++P G + +IG + E +F+ M+ G IP ++ M+ C
Sbjct: 580 KKMSAYRVEP-GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCR 638
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGY-----------AAKGEV-----QEVLK 473
++++A + + +G P TY++L+ Y + +GEV EVL+
Sbjct: 639 LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLR 698
Query: 474 LYYEMEYKSMCPGLSV--FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
E+ + GL V +T +I C+ LE A + M L PD+ Y T+I+S
Sbjct: 699 -----EFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Query: 532 HEQKGNNARVLQLCNEMA 549
+ +KG + L E++
Sbjct: 754 YFRKGYIDMAVTLVTELS 771
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 184/468 (39%), Gaps = 58/468 (12%)
Query: 103 SYSIAIHVLVRAGLITDARALL-------------ESLAAKNRDPGAVRAVTDSLIDAVG 149
+Y+I + L R G + +A LL L AV A+ LID
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAV-ALILELIDRKY 276
Query: 150 FVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSL 209
R VL ++V+ + +AA V +E GF + + + +V+ ++ +
Sbjct: 277 LAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE 336
Query: 210 VWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS 269
+ M+ N V + +++ CK + ++AL++ R + N
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCK---MDMCLEALEKFKEFRDMNIFLDRVCYNV 393
Query: 270 SLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
+ + K VEE LL+ + + +VPD + Y+ ++ G +
Sbjct: 394 AF--DALSKLGRVEE----------AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
AL++ +EM+ +G P+ Y G + G +E +E+ M+ G KP T + VII
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT-NSVII 500
Query: 390 GCAAGSGRLEECLGVF----------EAMLGAGFIPSCLS------------------FD 421
+ +++E F +A G+ + LS +
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
K+ LC +E+A+ L ++ PG + +I + V+E L+ M +
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ P L +T +I CR +L+ AE + MK R + PDV Y ++
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 211/472 (44%), Gaps = 50/472 (10%)
Query: 77 DPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGA 136
DPN ALSF K H + V +Y+ + +L GL ++L L KN + G
Sbjct: 69 DPN---LALSFLR-QLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELI-KNEERGF 123
Query: 137 VRAVTDSLIDAVGFVSGSHRPVLDL------LVQTYAKMRLTEAAFDVCCNVEARGFRVS 190
V D LI+ +G + + L LV+ Y + + + A DV + V
Sbjct: 124 --TVMD-LIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVD 180
Query: 191 LASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL- 249
+ + N +++ + ++ ++ +++ + + N T I++ ALC++G L+ L
Sbjct: 181 IKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLI 240
Query: 250 --DRIMGERK------RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVV----T 297
+ + G + + + A+ +LIL ++++ +L ++ + V MVV
Sbjct: 241 ENESVFGYKTFINGLCVTGETEKAV---ALILELIDRKYLAGDDLRA--VLGMVVRGFCN 295
Query: 298 LLKRLLQQNLVPD--SVGYSLIVHAKVRL-------GSLDSALEMYEEMVMSGFEPNSFV 348
+K ++++ + +G+ L V+A + + +L AL ++M+ G + N +
Sbjct: 296 EMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVI 355
Query: 349 YTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGS----GRLEECLGV 404
+ +CK EA+E + E R + + D V A + GR+EE +
Sbjct: 356 VSLILQCYCKMDMCLEALEKFK--EFRDMNIF---LDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
+ M G +P +++ +++ C V A + ++ G P TY++L+ G A
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
G +EVL++Y M+ + P + +I+ LC K+++AE + +++ +
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 164/422 (38%), Gaps = 59/422 (13%)
Query: 104 YSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLV 163
Y++A L + G + +A LL+ + + P + T LID + G LDL+
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTT--LIDGYC-LQGKVVDALDLID 447
Query: 164 QTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY 223
+ G L ++N ++ L R+ V ++YE M
Sbjct: 448 EMIGN-----------------GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 224 PNAVTLKIMIDALCKEGLLQRNV-DALDRIMGERKRSSHSPSAIVNSSL---ILRMVEKG 279
PNAVT ++I+ LC R V +A D ++ + ++ V + + K
Sbjct: 491 PNAVTNSVIIEGLC----FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKA 546
Query: 280 HLVEEEGKRERVAVMVV-------------TLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
+ E R+ V + + +LK++ + P ++ A +L +
Sbjct: 547 FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN 606
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP----YGE 382
+ A +++ MV G P+ F YT +C+ + +A L M+ RG+KP Y
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 383 TFDHVI-----------IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
D + + G + E L F A AG + + ++++ C+
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA---AGIGLDVVCYTVLIDRQCKMN 723
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
++EQA R++D G P Y+ LI Y KG + + L E+ K P S
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEA 783
Query: 492 SV 493
+V
Sbjct: 784 AV 785
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 45/295 (15%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS-FVYTSF 352
M++TL K+L Q L + Y+++V A R G+L EE M E S F Y +F
Sbjct: 199 MLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNL-------EEAAMLLIENESVFGYKTF 251
Query: 353 TGGFCKEGRIDEAMELMR-----------------GMEGRGL--KPYGETFDHVII---- 389
G C G ++A+ L+ GM RG + + + VII
Sbjct: 252 INGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEE 311
Query: 390 --------GCAAGSGR------LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
C A R L E LG + MLG G +C+ +++ C+ +
Sbjct: 312 IGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A D Y++ + G V+E +L EM+ + + P + +T++I
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
C GK+ DA + M ++PD+ Y +++ + G+ VL++ M +
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA 486
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
+++ M+ P+ T IMI C+ LQ+ + + + K+ P + + L+
Sbjct: 613 LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA----ESLFEDMKQRGIKPDVVTYTVLL 668
Query: 273 LRMV-------EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG 325
R + E + E GKR+ V L+ + D V Y++++ + ++
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEV-----LREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
+L+ A E+++ M+ SG EP+ YT+ + ++G ID A+ L+ + + P E+F+
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP-SESFE 782
Query: 386 HVIIGCAAGSGRLE 399
+ A + R +
Sbjct: 783 AAVKSAALKAKRFQ 796
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 34 VDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPND---AKTALSFFHW 90
V D C F + + D ++ L + + LV +L L N AK A FF W
Sbjct: 83 VLDTLQQDCPGFNTKSALDELNVSISGLLVREVLV-GILRTLSFDNKTRCAKLAYKFFVW 141
Query: 91 SAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGF 150
F H Y + + + G + +A+ + +D A T +L+
Sbjct: 142 CGGQENFRHTANCYHLLMKIFAECG---EYKAMCRLIDEMIKDGYPTTACTFNLLICTCG 198
Query: 151 VSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLV 210
+G R V++ +++ + +R S+N++LH L + L+
Sbjct: 199 EAGLARDVVEQFIKS-----------------KTFNYRPYKHSYNAILHSLLGVKQYKLI 241
Query: 211 WDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSS 270
VYE M+ P+ +T I++ A + G D L R++ E + SP + +
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANFRLG----KTDRLYRLLDEMVKDGFSPD-LYTYN 296
Query: 271 LILRMVEKG-----------HLVEEEGKRERVAVMVVTLLKRL----------------L 303
++L + G H+ E E + TL+ L +
Sbjct: 297 ILLHHLATGNKPLAALNLLNHM--REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETV 354
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
+ PD V Y++++ + G L+ A EM++EM G PN F Y S GFC G+
Sbjct: 355 KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFK 414
Query: 364 EAMELMRGMEGRGLKP 379
EA L++ ME RG P
Sbjct: 415 EACALLKEMESRGCNP 430
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 148/354 (41%), Gaps = 59/354 (16%)
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
FR + ++ ++ + + + + MI+ A T ++I C E L R
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTCGEAGLAR-- 204
Query: 247 DALDRIMGER----KRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
D +++ + + + HS +AI++S L ++ + ++ + +++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYK----------------LIDWVYEQM 248
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
L+ PD + Y++++ A RLG D + +EMV GF P+ + Y +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
A+ L+ M G++P F +I G + +G+LE C + + G P +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSR-AGKLEACKYFMDETVKVGCTPDVVC--- 364
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKS 482
Y+++I GY + GE+++ +++ EM K
Sbjct: 365 --------------------------------YTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 483 MCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
P + + S+I+ C GK ++A LK M+SR P+ +Y T++ + + G
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 115/330 (34%), Gaps = 53/330 (16%)
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
R+ N L + I A C E A+ R++ E + + +A + LI E G
Sbjct: 149 RHTANCYHLLMKIFAECGE------YKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAG- 201
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+A VV + N P Y+ I+H+ + + +YE+M+
Sbjct: 202 ----------LARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED 251
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
GF P+ Y + G+ D L+ M G P T++ ++ A G+ L
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA- 310
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
L + M G P + F +++ L +E + + G P Y+++I
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
GY + GE LE AE+ K M + P
Sbjct: 371 GYISGGE-----------------------------------LEKAEEMFKEMTEKGQLP 395
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+V Y +MI G L EM S
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMES 425
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 163/403 (40%), Gaps = 52/403 (12%)
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
+RV +N + VL R R L +Y M T I LCK +
Sbjct: 40 YRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCK----VKKF 95
Query: 247 DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQN 306
D +D ++ + + P I ++ L ++ + +V V T ++Q+
Sbjct: 96 DLIDALLSDMETLGFIPD-IWAFNVYLDLL---------CRENKVGFAVQTFFC-MVQRG 144
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN--------------------- 345
PD V Y+++++ R G + A+E++ M+ SG P+
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 346 ---------------SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG 390
+ VY + GFCK GRI++A L M G +P T++ V++
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN-VLLN 263
Query: 391 CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLP 450
+ L+ GV M+ +G S+++++++ C ++ + + ++
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 451 GETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
+YS LI+ + ++ +L+ EM K M + +TS+I+ R G A+K L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 511 KTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
M L+PD Y T++ + GN + + N+M E+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 167/433 (38%), Gaps = 74/433 (17%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V SY+I I+ L RAG +TDA + ++ P D+ A V H +D
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP-------DNKACAALVVGLCHARKVD 201
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLAS--FNSVLHVLQRSDRVSLVWDVYEHMI 218
L + A+ E + RV L++ +N+++ ++ R+ + +M
Sbjct: 202 LAYEMVAE--------------EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ P+ VT ++++ +L+R + +M E RS A + L+ R
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRA----EGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
H + + + ++ D V YS ++ R + A ++EEM
Sbjct: 304 SHPDK-----------CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
G N YTS F +EG A +L+ M GL P D +
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP-----DRIF---------- 397
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ +++ LC++ +V++A +++ P +Y+ L
Sbjct: 398 ---------------------YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
I G G V E +KL+ +M+ K CP F +I L R KL A K M +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 519 TPDVAIYETMIAS 531
T D + +T+I +
Sbjct: 497 TLDRDVSDTLIKA 509
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 133/324 (41%), Gaps = 42/324 (12%)
Query: 93 KTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVS 152
K+ R Y+ I +AG I A AL ++ +P V
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLV--------------- 256
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
++L+ Y + + A V + G ++ S+N +L+R RVS
Sbjct: 257 -----TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN---QLLKRHCRVSHPDK 308
Query: 213 VYEHMIR---GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNS 269
Y M++ R + + V+ +I+ C+ N R+ E ++ + + +
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRAS----NTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 270 SLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDS 329
SLI + +G+ + + LL ++ + L PD + Y+ I+ + G++D
Sbjct: 365 SLIKAFLREGN-----------SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 330 ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVII 389
A ++ +M+ P++ Y S G C+ GR+ EA++L M+G+ P TF +I
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473
Query: 390 GCAAGSGRLEECLGVFEAMLGAGF 413
G G +L V++ M+ GF
Sbjct: 474 GLIRGK-KLSAAYKVWDQMMDKGF 496
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 4/236 (1%)
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+ Q L + Y + V+ G +D+A+++++EM S + SF Y F G +E R
Sbjct: 1 MHQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRF 60
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+ A + M+ G T+ I G C L + L M GFIP +F+
Sbjct: 61 ELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDAL--LSDMETLGFIPDIWAFN 118
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ LC V A ++ +G P +Y++LI G G+V + ++++ M
Sbjct: 119 VYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS 178
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+ P +++ LC K++ A E + +KS + +Y +I+ + G
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV-LQRSDRVSLVW 211
G + ++LVQ + K + E A++V +E G R ++N++ +Q+ + V
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 212 DVYEHMI-RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSS 270
+V E M+ + + PN T I++ C+EG ++ D L R + K + +V +S
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR---DGL-RFVRRMKEMRVEANLVVFNS 300
Query: 271 LILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSA 330
LI VE +++ +G E V+TL+K N+ D + YS +++A G ++ A
Sbjct: 301 LINGFVE---VMDRDGIDE-----VLTLMKEC---NVKADVITYSTVMNAWSSAGYMEKA 349
Query: 331 LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM--EGRGLKPYGETFDHVI 388
++++EMV +G +P++ Y+ G+ + +A EL+ + E R P F VI
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVI 406
Query: 389 IG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
G C+ GS +++ + VF M G P+ +F+ ++ E + +A L + G
Sbjct: 407 SGWCSNGS--MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Query: 448 FLPGETTYSLLIKGYAAKGEVQE 470
P +T+ LL + + G E
Sbjct: 465 VKPENSTFLLLAEAWRVAGLTDE 487
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 194/457 (42%), Gaps = 55/457 (12%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
VRS + ++VL+ G +A+ + ++LA HRP L
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLA-----------------------ETGHRPSLI 81
Query: 161 LLVQTYAKMRLTE---AAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
A M + + + + VE G ++ FN+V++ S + D + +
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME---DAVQAL 138
Query: 218 IRGRNY---PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILR 274
++ + P T +I G +R+ + LD +M E P+ I +++++
Sbjct: 139 LKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD-LMLEEGNVDVGPN-IRTFNVLVQ 196
Query: 275 MVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG-SLDSALEM 333
K VEE + ++K++ + + PD+V Y+ I V+ G ++ + E+
Sbjct: 197 AWCKKKKVEEAWE----------VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 334 YEEMVMS-GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
E+MVM +PN GG+C+EGR+ + + +R M+ ++ F+ +I G
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 393 AGSGR--LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLP 450
R ++E L + M +++ ++ +E+A ++ G P
Sbjct: 307 EVMDRDGIDEVLTL---MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 451 GETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
YS+L KGY E ++ +L + +S P + +FT+VI C G ++DA +
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 511 KTMKSRLLTPDVAIYETMIASH---EQKGNNARVLQL 544
M ++P++ +ET++ + +Q VLQ+
Sbjct: 423 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 459
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 185/463 (39%), Gaps = 35/463 (7%)
Query: 104 YSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVL---- 159
Y++ I + R + AR L + + P A D+LI+A G +G R +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDA--ETYDALINAHG-RAGQWRWAMNLMD 70
Query: 160 DLLVQTYAKMRLT--------------EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSD 205
D+L A R T A +VC + G L + N VL +
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 206 RVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSA 265
+ S +E M + P+ T I+I L K G + +D + + KR+ P
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM--REKRAECRPDV 188
Query: 266 IVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG 325
+ +S++ HL +G+ E + + ++ + L P+ V Y+ ++ A G
Sbjct: 189 VTFTSIM-------HLYSVKGEIENCR----AVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
+AL + ++ +G P+ YT + + + +A E+ M KP T++
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
+I +G L E + +F M G P+ +S ++ ++ + L+
Sbjct: 298 -ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+G Y+ I Y E+++ + LY M K + FT +I CR K +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
A YLK M+ + +Y +++ ++ ++G + N+M
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/496 (18%), Positives = 190/496 (38%), Gaps = 90/496 (18%)
Query: 101 VRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD 160
V +++ +H+ G I + RA+ E++ A+ P V +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS--------------------YN 227
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
L+ YA ++ A V +++ G + S+ +L+ RS + +V+ M +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDA-------------------------------L 249
R PN VT +IDA G L V+ +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 250 DRIM-GERKRSSHSPSAIVNSSLILRM----VEKGHLVEEEGKRERV---AVMVVTLLKR 301
D ++ + R + +A NS++ + +EK + + ++++V +V L+
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 302 LLQQNLVPDSVGY----------------SLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
+ + P+++ Y S ++ A + G + A ++ +M M+G EP+
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA-----GSGRLEE 400
YTS + + +A EL ME G++P I C+A G
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS-------IACSALMRAFNKGGQPS 520
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT--YSLL 458
+ V ++ IP + + C + +L +++D +LP + + +
Sbjct: 521 NVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDP-YLPSLSIGLTNQM 579
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ + G+V+ ++KL+Y++ + L + +++ L G + L+ M +
Sbjct: 580 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 639
Query: 519 TPDVAIYETMIASHEQ 534
P +Y +I+ E+
Sbjct: 640 QPSNQMYRDIISFGER 655
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 47/430 (10%)
Query: 64 NDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARAL 123
++ LV ++L ++ ND +TA +FF W+ K + VR Y I +L + A L
Sbjct: 126 SNELVVEILSRVR--NDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTL 183
Query: 124 LESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVE 183
++ + R + SL+++ L ++++ Y + A + +
Sbjct: 184 IDEM----------RKFSPSLVNS---------QTLLIMIRKYCAVHDVGKAINTFHAYK 224
Query: 184 ARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI--RGRNYP-NAVTLKIMIDALCKEG 240
+ + F S+L L R VS H+I YP +A + I+++ C
Sbjct: 225 RFKLEMGIDDFQSLLSALCRYKNVSDA----GHLIFCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 241 LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLK 300
R +R+ E + SS+I + G L + V+ L
Sbjct: 281 GSPREA---ERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNK-----------VLKLFD 326
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM-VMSGFEPNSFVYTSFTGGFCKE 359
R+ ++ + PD Y+ +VHA + + A + + M G EPN Y S CK
Sbjct: 327 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
+ +EA ++ M +GL P T+ + G EE + M G P+ +
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG----EEVFELLAKMRKMGCEPTVET 442
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
+ ++ KLC RD + + +K P ++Y ++I G G+++E Y EM+
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 480 YKSMCPGLSV 489
K M P +V
Sbjct: 503 DKGMRPNENV 512
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 8/224 (3%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D V YS ++ + GSL+ L++++ M EP+ VY + K + EA LM
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 370 RGMEG-RGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
+ ME +G++P T++ +I C A + EE VF+ ML G P+ ++ + L
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKAR--KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL 418
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
R E+ L ++ G P TY +LI+ + VL L+ EM+ K++ P L
Sbjct: 419 ---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDL 475
Query: 488 SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
S + +I L GK+E+A Y K MK + + P+ + E MI S
Sbjct: 476 SSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV-EDMIQS 518
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 203/492 (41%), Gaps = 65/492 (13%)
Query: 63 LNDSLVEQVLLELKDPNDAKTALSFFHWSAKTH-RFNHGVRSYSIAIHVLVRAGLITDAR 121
L SL+ Q+L + K+P TAL F + + + H Y+ I +L ++ + + +
Sbjct: 10 LTPSLLSQILKKQKNP---VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 122 ALLESL---AAKNRD---PGAVRAVTDS--LIDAVGFVSGSHR-------PVLDLLVQTY 166
++E + + + +D +R + + L DA+ H D L+Q
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 167 AKMRLTEAAFDVCCNVEAR---GFRVS--LASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
K E+ + C++ + G+ V+ + + N ++ VL + +R L V++ M
Sbjct: 127 VK----ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
YP+ + +I++ C EG L+ L + + +V L+ + + G +
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 282 ---VEEEGKRERVAVMV-------------------VTLLKRLLQQNLVPDSV----GYS 315
+E GK R + + +KRLL + L+ ++ YS
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG--ME 373
+ G L E+ M GFEP F+Y + C+ G++ EA+ ++ M+
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL----SFDKMVEKLCE 429
G L G +V+I G+ E +G + M SC+ ++ +V+ LC
Sbjct: 363 GHCLPTVG--VYNVLIKGLCDDGKSMEAVGYLKKMSKQ---VSCVANEETYQTLVDGLCR 417
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ +A+ + +L K PG TY ++IKG E + EM + M P SV
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 490 FTSVIQCLCRCG 501
+ ++ + +C C
Sbjct: 478 WKALAESVCFCA 489
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 147/366 (40%), Gaps = 29/366 (7%)
Query: 194 FNSVLHVLQRS----DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
F SV+ R+ D +SL ++E N V + D L +E + + ++A
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEF--------NCVNWSLSFDTLLQEMVKESELEAA 135
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
I + S I +L+++++ + + R +A V + + Q P
Sbjct: 136 CHIFRKYCYGWEVNSRITALNLLMKVLCQVN-------RSDLASQV---FQEMNYQGCYP 185
Query: 310 DSVGYSLIVHAKVRLGSLDSA----LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
D Y +++ G L+ A M+ + G + VY C G +D+A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
+E++ + +GLK + H+ G + S +E + L G IP S+ M
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
L E + + L + KGF P Y +K G+++E + + + + C
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Query: 485 -PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVL 542
P + V+ +I+ LC GK +A YLK M ++ + Y+T++ + G
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 543 QLCNEM 548
Q+ EM
Sbjct: 426 QVMEEM 431
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 203/492 (41%), Gaps = 65/492 (13%)
Query: 63 LNDSLVEQVLLELKDPNDAKTALSFFHWSAKTH-RFNHGVRSYSIAIHVLVRAGLITDAR 121
L SL+ Q+L + K+P TAL F + + + H Y+ I +L ++ + + +
Sbjct: 10 LTPSLLSQILKKQKNP---VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 122 ALLESL---AAKNRD---PGAVRAVTDS--LIDAVGFVSGSHR-------PVLDLLVQTY 166
++E + + + +D +R + + L DA+ H D L+Q
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 167 AKMRLTEAAFDVCCNVEAR---GFRVS--LASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
K E+ + C++ + G+ V+ + + N ++ VL + +R L V++ M
Sbjct: 127 VK----ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
YP+ + +I++ C EG L+ L + + +V L+ + + G +
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 282 ---VEEEGKRERVAVMV-------------------VTLLKRLLQQNLVPDSV----GYS 315
+E GK R + + +KRLL + L+ ++ YS
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG--ME 373
+ G L E+ M GFEP F+Y + C+ G++ EA+ ++ M+
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL----SFDKMVEKLCE 429
G L G +V+I G+ E +G + M SC+ ++ +V+ LC
Sbjct: 363 GHCLPTVG--VYNVLIKGLCDDGKSMEAVGYLKKMSKQ---VSCVANEETYQTLVDGLCR 417
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ +A+ + +L K PG TY ++IKG E + EM + M P SV
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 490 FTSVIQCLCRCG 501
+ ++ + +C C
Sbjct: 478 WKALAESVCFCA 489
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 147/366 (40%), Gaps = 29/366 (7%)
Query: 194 FNSVLHVLQRS----DRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
F SV+ R+ D +SL ++E N V + D L +E + + ++A
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEF--------NCVNWSLSFDTLLQEMVKESELEAA 135
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
I + S I +L+++++ + + R +A V + + Q P
Sbjct: 136 CHIFRKYCYGWEVNSRITALNLLMKVLCQVN-------RSDLASQV---FQEMNYQGCYP 185
Query: 310 DSVGYSLIVHAKVRLGSLDSA----LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
D Y +++ G L+ A M+ + G + VY C G +D+A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 366 MELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
+E++ + +GLK + H+ G + S +E + L G IP S+ M
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
L E + + L + KGF P Y +K G+++E + + + + C
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Query: 485 -PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVL 542
P + V+ +I+ LC GK +A YLK M ++ + Y+T++ + G
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 543 QLCNEM 548
Q+ EM
Sbjct: 426 QVMEEM 431
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 8/255 (3%)
Query: 306 NLVPDSVG-------YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
N VP ++G Y+ ++HA + A + M+ G +P+ Y G+C
Sbjct: 170 NGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS 229
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
G++ EA E + M RG P D +I G +G LE + M GF+P
Sbjct: 230 AGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL-NAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+F+ ++E + ++ +VE G TY LI + G++ E +L
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
P S++ +I+ +CR G +DA + MK + P+ +Y +I + G
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 539 ARVLQLCNEMASLEL 553
EM + L
Sbjct: 409 VDAANYLVEMTEMGL 423
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L++R++++ L PD Y+++V+ G + A E +EM GF P + G
Sbjct: 204 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 263
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
G ++ A E++ M G P +TF+ ++I + SG +E C+ ++ G
Sbjct: 264 NAGYLESAKEMVSKMTKGGFVPDIQTFN-ILIEAISKSGEVEFCIEMYYTACKLGLCVDI 322
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
++ ++ + + +++A L ++ G P + Y+ +IKG G + + +
Sbjct: 323 DTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSD 382
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
M+ K+ P V+T +I R GK DA YL M L P
Sbjct: 383 MKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 123/311 (39%), Gaps = 17/311 (5%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNV-EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
L +++ Y K + A ++ V + G + ++ +NS+LH L + +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
MIR P+ T I+++ C G ++ + LD E R +P A LI ++
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD----EMSRRGFNPPARGRDLLIEGLL 263
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
G+L E +E V+ M + VPD +++++ A + G ++ +EMY
Sbjct: 264 NAGYL---ESAKEMVSKMT--------KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
G + Y + K G+IDEA L+ G KP+ + +I G +G
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR-NG 371
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
++ F M P+ + ++ A L + + G +P +
Sbjct: 372 MFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFD 431
Query: 457 LLIKGYAAKGE 467
++ G G+
Sbjct: 432 MVTDGLKNGGK 442
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+ P S Y + + ++++ M+ L GET II +G +++
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETL-CFIIEQYGKNGHVDQA 165
Query: 402 LGVFEAMLGAGFIPSCLS-------FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT 454
+ +F +P L ++ ++ LC+ + A A + R++ KG P + T
Sbjct: 166 VELFNG------VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT 219
Query: 455 YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
Y++L+ G+ + G+++E + EM + P +I+ L G LE A++ + M
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT 279
Query: 515 SRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
PD+ + +I + + G ++ C EM
Sbjct: 280 KGGFVPDIQTFNILIEAISKSGE----VEFCIEM 309
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 171/445 (38%), Gaps = 74/445 (16%)
Query: 85 LSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSL 144
++FF W+ + V SYS+ + L R L + +L+ + + +P
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDL-------- 186
Query: 145 IDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRS 204
L + + ++ ++ A ++ E+ G + S SFN++L L
Sbjct: 187 ------------ECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCER 234
Query: 205 DRVSLVWDVYEHMIRGRNYP-NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
VS V+ + N P ++ + IMI K G V+ +++++ E
Sbjct: 235 SHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLG----EVEEMEKVLKE-------- 280
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
MVE G PD + YS ++ R
Sbjct: 281 -----------MVESG---------------------------FGPDCLSYSHLIEGLGR 302
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G ++ ++E+++ + G P++ VY + F DE+M R M +P ET
Sbjct: 303 TGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
+ ++ G G ++ + L +FE ML G +P+ ++ LC A +
Sbjct: 363 YSKLVSGLIKGR-KVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
G E+ Y LL+K + G+ +L ++ EM+ + V+ ++ LC G L
Sbjct: 422 RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 504 EDAEKYLKTMKSRLLTPDVAIYETM 528
E+A ++ + P+ +Y +
Sbjct: 482 ENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 286 GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
G+R+ + M+ +LK ++ + + PD ++ + + VR+ + A+E++EE G + +
Sbjct: 162 GRRKLFSFMM-DVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCS 220
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
+ + + C+ + A + +G P+ +++I + G +EE V
Sbjct: 221 TESFNALLRCLCERSHVSAAKSVFNAKKGN--IPFDSCSYNIMISGWSKLGEVEEMEKVL 278
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+ M+ +GF P CLS+ ++E L + + + KG +P Y+ +I + +
Sbjct: 279 KEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISA 338
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
+ E ++ Y M + P L ++ ++ L + K+ DA + + M SR + P +
Sbjct: 339 RDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLV 398
Query: 526 ETMI 529
+ +
Sbjct: 399 TSFL 402
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 295 VVTLLKRLLQQNLVPDSVG-YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+VT +++ V VG YS+I+ A R +++ + MV G P+ T
Sbjct: 134 MVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAM 193
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
F + + A+EL E G+K E+F+ ++ C + VF A G
Sbjct: 194 DSFVRVHYVRRAIELFEESESFGVKCSTESFN-ALLRCLCERSHVSAAKSVFNAKKGNIP 252
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
SC S++ M+ + +VE+ L +++ GF P +YS LI+G G + + ++
Sbjct: 253 FDSC-SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHE 533
++ +++K P +V+ ++I +++ +Y + M P++ Y +++
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 534 QKGNNARVLQLCNEMAS 550
+ + L++ EM S
Sbjct: 372 KGRKVSDALEIFEEMLS 388
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGV 404
+S Y G+ K G ++E ++++ M G P ++ H+I G +GR+ + + +
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR-TGRINDSVEI 312
Query: 405 FEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAA 464
F+ + G +P ++ M+ RD +++ R+LD+ P TYS L+ G
Sbjct: 313 FDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIK 372
Query: 465 KGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK-YLKTMKSRLLTPDVA 523
+V + L+++ EM + + P + TS ++ LC G A Y K+ K+ + A
Sbjct: 373 GRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESA 432
Query: 524 IYETMIASHEQKGNNARVLQLCNEM 548
Y+ ++ + G +L + +EM
Sbjct: 433 -YKLLLKRLSRFGKCGMLLNVWDEM 456
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 13/227 (5%)
Query: 296 VTLLKRLLQQN----LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
VT KR+ ++ + P+ YS ++ ++G+L +L +Y+EM G P VY S
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLG 410
+E DEAM+LM+ + GLKP T++ +I C A G+L+ V M+
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEA--GKLDVARNVLATMIS 392
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
P+ +F +E + + +E ++ D G P E T+ LLI G KG+ E
Sbjct: 393 ENLSPTVDTFHAFLEAVNFEKTLEVLGQ--MKISDLG--PTEETF-LLILGKLFKGKQPE 447
Query: 471 -VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
LK++ EM+ + +++ + IQ L CG LE A + MKS+
Sbjct: 448 NALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 379 PYGETFDHVIIGCA-AGSGRLEECLGVFEAMLGAG--FIPSCLSFDKMVEKLCE-NRDVE 434
PY E F ++ CA G +E+ E ML + F F+ ++ C DV
Sbjct: 222 PYDEAFQGLL--CALCRHGHIEKAE---EFMLASKKLFPVDVEGFNVILNGWCNIWTDVT 276
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
+A + + P + +YS +I ++ G + + L+LY EM+ + + PG+ V+ S++
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
L R ++A K +K + L PD Y +MI
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 338 VMSGFE--PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG-ETFDHVIIGCAAG 394
+M F+ P + C+ G I++A E M + + L P E F+ ++ G
Sbjct: 214 IMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNI 271
Query: 395 SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETT 454
+ E ++ M P+ S+ M+ + ++ + + +G PG
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 455 YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
Y+ L+ + E +KL ++ + + P + S+I+ LC GKL+ A L TM
Sbjct: 332 YNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMI 391
Query: 515 SRLLTPDVAIYETMIAS 531
S L+P V + + +
Sbjct: 392 SENLSPTVDTFHAFLEA 408
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 28/337 (8%)
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV-LQRSDRVSLVW 211
G + ++LVQ + K + E A++V +E G R ++N++ +Q+ + V
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 212 DVYEHMI-RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSS---------- 260
+V E M+ + + PN T I++ C+EG ++ + + R+ R ++
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 261 ----HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSL 316
I +L L ++ VE G +++ V V+TL+K N+ D + YS
Sbjct: 305 FVEVMDRDGIDEVTLTLLLMSFNEEVELVG-NQKMKVQVLTLMKEC---NVKADVITYST 360
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM--EG 374
+++A G ++ A ++++EMV +G +P++ Y+ G+ + +A EL+ + E
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES 420
Query: 375 RGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
R P F VI G C+ GS +++ + VF M G P+ +F+ ++ E +
Sbjct: 421 R---PNVVIFTTVISGWCSNGS--MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
+A L + G P +T+ LL + + G E
Sbjct: 476 WKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQ---EVLKLYY 476
F+ ++ E+ ++E A L ++ + G P +TY+ LIKGY G+ + E+L L
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 477 EMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
E + P + F ++Q C+ K+E+A + +K M+ + PD Y T+ + QKG
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 537 NNAR 540
R
Sbjct: 238 ETVR 241
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G + A+ +++ + G E N+ CKE R+++A ++ ++ + P TF
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTF 227
Query: 385 DHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
+ I G C A R+EE L + M G GF P +S+ ++ C+ + + L+ +
Sbjct: 228 NIFIHGWCKAN--RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
G P TY+ ++ A+ E +E L++ M+ P + +I L R G+L
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 504 EDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
E+AE+ + L ++ + + Y +MIA + + ++L EM S L
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 190/498 (38%), Gaps = 91/498 (18%)
Query: 27 RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALS 86
R+ + ++ DDV F+R S D + ++ + L+D LV ++L +D D ++AL
Sbjct: 60 RDGDRDSEDDV-------FKRLSS-DEICKR---VNLSDGLVHKLLHRFRD--DWRSALG 106
Query: 87 FFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLID 146
W+ H +Y +A+ +L +A + +E R D L+
Sbjct: 107 ILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVE------------RMRGDKLV- 153
Query: 147 AVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDR 206
+ V+ +++ +A E A + + G + S N +L L + R
Sbjct: 154 TLNTVAK--------IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 207 VSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAI 266
V V ++ PNA T I I CK ++ + + +
Sbjct: 206 VEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM-------------- 250
Query: 267 VNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
KGH G R P + Y+ I+ +
Sbjct: 251 -----------KGH-----GFR--------------------PCVISYTTIIRCYCQQFE 274
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
EM EM +G PNS YT+ + +EA+ + M+ G KP F +
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP-DSLFYN 333
Query: 387 VIIGCAAGSGRLEECLGVFEA-MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
+I A +GRLEE VF M G + +++ M+ C + D E L + ++
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC-HHDEEDKAIELLKEME 392
Query: 446 KGFL--PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK-SMCPGLSVFTSVIQCLCRCGK 502
L P TY L++ +G+V EV KL EM K + S +T +IQ LCR
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 503 LEDAEKYLKTMKSRLLTP 520
E A + M S+ +TP
Sbjct: 453 CEWAYCLFEEMISQDITP 470
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 287 KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS 346
K +RV V LL+ L+ ++ P++ +++ +H + ++ AL +EM GF P
Sbjct: 202 KEKRVEQARVVLLQ--LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCV 259
Query: 347 FVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
YT+ +C++ + E++ ME G P T+ I+ EE L V
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYT-TIMSSLNAQKEFEEALRVAT 318
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL-TRLLDKGFLPGETTYSLLIKGYAAK 465
M +G P L ++ ++ L +E+A + + G +TY+ +I Y
Sbjct: 319 RMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 466 GEVQEVLKLYYEMEYKSMC-PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR-LLTPDVA 523
E + ++L EME ++C P + + +++ + G + + K LK M ++ L+ D +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 524 IYETMI 529
Y +I
Sbjct: 439 TYTFLI 444
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
K R+ E +E MRG + L + I+ AG+G EE +G+F+ + G +
Sbjct: 136 KWDRMKEFVERMRGDKLVTLNTVAK-----IMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
S + +++ LC+ + VEQA L + L P T+++ I G+ V+E L E
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
M+ P + +T++I+C C+ + + L M++ P+ Y T+++S
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G + A+ +++ + G E N+ CKE R+++A ++ ++ + P TF
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTF 227
Query: 385 DHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
+ I G C A R+EE L + M G GF P +S+ ++ C+ + + L+ +
Sbjct: 228 NIFIHGWCKAN--RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
G P TY+ ++ A+ E +E L++ M+ P + +I L R G+L
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 504 EDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
E+AE+ + L ++ + + Y +MIA + + ++L EM S L
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 190/498 (38%), Gaps = 91/498 (18%)
Query: 27 RNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPNDAKTALS 86
R+ + ++ DDV F+R S D + ++ + L+D LV ++L +D D ++AL
Sbjct: 60 RDGDRDSEDDV-------FKRLSS-DEICKR---VNLSDGLVHKLLHRFRD--DWRSALG 106
Query: 87 FFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLID 146
W+ H +Y +A+ +L +A + +E R D L+
Sbjct: 107 ILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVE------------RMRGDKLV- 153
Query: 147 AVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDR 206
+ V+ +++ +A E A + + G + S N +L L + R
Sbjct: 154 TLNTVAK--------IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 207 VSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAI 266
V V ++ PNA T I I CK ++ + + +
Sbjct: 206 VEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM-------------- 250
Query: 267 VNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
KGH G R P + Y+ I+ +
Sbjct: 251 -----------KGH-----GFR--------------------PCVISYTTIIRCYCQQFE 274
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
EM EM +G PNS YT+ + +EA+ + M+ G KP F +
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP-DSLFYN 333
Query: 387 VIIGCAAGSGRLEECLGVFEA-MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
+I A +GRLEE VF M G + +++ M+ C + D E L + ++
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC-HHDEEDKAIELLKEME 392
Query: 446 KGFL--PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK-SMCPGLSVFTSVIQCLCRCGK 502
L P TY L++ +G+V EV KL EM K + S +T +IQ LCR
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 503 LEDAEKYLKTMKSRLLTP 520
E A + M S+ +TP
Sbjct: 453 CEWAYCLFEEMISQDITP 470
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 287 KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS 346
K +RV V LL+ L+ ++ P++ +++ +H + ++ AL +EM GF P
Sbjct: 202 KEKRVEQARVVLLQ--LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCV 259
Query: 347 FVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
YT+ +C++ + E++ ME G P T+ I+ EE L V
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYT-TIMSSLNAQKEFEEALRVAT 318
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL-TRLLDKGFLPGETTYSLLIKGYAAK 465
M +G P L ++ ++ L +E+A + + G +TY+ +I Y
Sbjct: 319 RMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 466 GEVQEVLKLYYEMEYKSMC-PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR-LLTPDVA 523
E + ++L EME ++C P + + +++ + G + + K LK M ++ L+ D +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 524 IYETMI 529
Y +I
Sbjct: 439 TYTFLI 444
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
K R+ E +E MRG + L + I+ AG+G EE +G+F+ + G +
Sbjct: 136 KWDRMKEFVERMRGDKLVTLNTVAK-----IMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
S + +++ LC+ + VEQA L + L P T+++ I G+ V+E L E
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
M+ P + +T++I+C C+ + + L M++ P+ Y T+++S
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 9/249 (3%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV--MSGFEPNSFVYTSFTGGFCKEGRIDE 364
V D V Y ++ A+E YEE V S ++ Y + G+ DE
Sbjct: 269 FVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDE 328
Query: 365 AMELMRGMEGRGLKPYG-----ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
A++L ++ P TF+ ++ G AG G+ EE + VF M P LS
Sbjct: 329 ALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG-GKFEEAMEVFRQMGDFKCSPDTLS 387
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
F+ ++ +LC+N + +A + +K P E TY LL+ +G++ E Y M
Sbjct: 388 FNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV 447
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNA 539
++ P L+V+ + L + GKL+DA+ + M S+L D A Y+ ++ + + G
Sbjct: 448 ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEA-YKFIMRALSEAGRLD 506
Query: 540 RVLQLCNEM 548
+L++ +EM
Sbjct: 507 EMLKIVDEM 515
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 52/372 (13%)
Query: 66 SLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLE 125
+L+ Q L+++ P + AL + N + ++ I + LV + A + E
Sbjct: 169 NLIFQAYLDVRKP---EIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKE 225
Query: 126 SLAAK------------------NRDPGAVRAVTDSLIDAVG-FVSGSHRPVLDLLVQTY 166
+A K N D V + L + +G FV V L++ Y
Sbjct: 226 DMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGV--VYGQLMKGY 283
Query: 167 AKMRLTEAAFDVCCNVEARG----FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ + A + C EA G R+S ++N VL L + + +++ + + N
Sbjct: 284 FMKEMEKEAME--CYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHN 341
Query: 223 YP-----NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
P N T +M++ C G + ++ R MG+ K SP + ++L+ ++ +
Sbjct: 342 PPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF-RQMGDFK---CSPDTLSFNNLMNQLCD 397
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
L E E L + ++N+ PD Y L++ + G +D Y+ M
Sbjct: 398 NELLAEAE-----------KLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTM 446
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
V S PN VY K G++D+A M + LK E + I+ + +GR
Sbjct: 447 VESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAY-KFIMRALSEAGR 504
Query: 398 LEECLGVFEAML 409
L+E L + + ML
Sbjct: 505 LDEMLKIVDEML 516
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 58/353 (16%)
Query: 160 DLLVQTYAKMRLTEAAFDVCC-NVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI 218
+ L+ Y K+ AF + ++ G + ++N +L L +S ++++H+
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL- 180
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ R P +T I+I+ LCK R V ++D +M E K+S ++P+A+ +++ L+M K
Sbjct: 181 KSRVKPELMTYNILINGLCK----SRRVGSVDWMMRELKKSGYTPNAVTYTTM-LKMYFK 235
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
+E+ + L ++ ++ D +V A ++ G + A E E+V
Sbjct: 236 TKRIEKG----------LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Query: 339 MSGFEPNSFV-YTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
SG V Y + + K+G +D +L+ +E +GLKP + + H II
Sbjct: 286 RSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP--DDYTHTII-------- 335
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
+L G + A +L + + G P T +
Sbjct: 336 -------VNGLLNIG-------------------NTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
LI G G V ++L+ ME + +TSV+ LC+ G+L A K L
Sbjct: 370 LIDGLCKAGHVDRAMRLFASMEVRDE----FTYTSVVHNLCKDGRLVCASKLL 418
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 297 TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF 356
TLL ++ ++PD + Y+ ++ R +D A + M +G EP+ Y S G
Sbjct: 34 TLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGA 93
Query: 357 CKEGRIDEAMELMRGMEGRGLKP-----------------YGETFD-------------- 385
K ++ ++L M GL P +GE F
Sbjct: 94 AKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPG 153
Query: 386 ----HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
++++ SG + + +F+ L + P ++++ ++ LC++R V + +
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMR 212
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
L G+ P TY+ ++K Y +++ L+L+ +M+ + +V+ L + G
Sbjct: 213 ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Query: 502 KLEDAEKYLKTM-KSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ E+A + + + +S + D+ Y T++ + + GN V L E+
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 163/402 (40%), Gaps = 20/402 (4%)
Query: 153 GSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWD 212
G +L++ V + K R E A + + G + ++N+++ R + +
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 213 VYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLI 272
V M P+ T +I K +L R + D ++ S SP ++L+
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML----HSGLSPDMWSYNTLM 125
Query: 273 LRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALE 332
+ G G+ ++ L + + LVP Y++++ A + G D+A+E
Sbjct: 126 SCYFKLG----RHGEAFKI------LHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE 175
Query: 333 MYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA 392
+++ + S +P Y G CK R+ +MR ++ G P T+ ++
Sbjct: 176 LFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT-TMLKMY 233
Query: 393 AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
+ R+E+ L +F M G+ + +V L + E+A + L+ G +
Sbjct: 234 FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQD 293
Query: 453 -TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLK 511
+Y+ L+ Y G + V L E+E K + P T ++ L G AEK+L
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 512 TMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+ + P V +I + G+ R ++L AS+E+
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL---FASMEV 392
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 179/477 (37%), Gaps = 90/477 (18%)
Query: 18 KLHSHTAFPRNSNHNAVDDV-AAAICDSFRRRRSWDAVSRKF--GSLELNDSLVEQVLLE 74
+L +A P +AVD + IC R W+ +++ LV +VL
Sbjct: 596 QLVQQSALP--PALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRH 653
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
K +A L FF W K + + H +Y+++I V AG D + + SL + R
Sbjct: 654 AKIQGNA--VLRFFSWVGKRNGYKHNSEAYNMSIKV---AGCGKDFKQM-RSLFYEMRRQ 707
Query: 135 GAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMR-----LTEAAFD----VCCNVEAR 185
G + D+ A+ + + ++ ++T+ +M+ + + F V C + R
Sbjct: 708 GCL-ITQDTW--AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGR 764
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN---------------YPNAVTLK 230
+ +F ++ DR LV D + N +P V
Sbjct: 765 NVEEATRTFREMIRSGFVPDR-ELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYS 823
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
I I ALC+ G L+ + L GER SL+
Sbjct: 824 IYIRALCRIGKLEEALSELASFEGER-------------SLL------------------ 852
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
D Y IVH ++ G L AL+ M G +P VYT
Sbjct: 853 -------------------DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYT 893
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
S F KE ++++ +E + MEG +P T+ +I G + G++EE F M
Sbjct: 894 SLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS-LGKVEEAWNAFRNMEE 952
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
G P ++ K + LC+ E A L+ +LDKG P + + G +G+
Sbjct: 953 RGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 123/311 (39%), Gaps = 15/311 (4%)
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
T IMI + GL + R E K PS+ LI + EK EE
Sbjct: 715 TWAIMIMQYGRTGLTNIAI----RTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
R + +++ VPD + +G+ A + + GF P +
Sbjct: 771 R---------TFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTV 820
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
Y+ + C+ G+++EA+ + EG T+ ++ G G L++ L +
Sbjct: 821 AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ-RGDLQKALDKVNS 879
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
M G P + ++ + + +E+ ++ + P TY+ +I GY + G+
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
V+E + ME + P ++ I CLC+ K EDA K L M + + P + T
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 528 MIASHEQKGNN 538
+ ++G +
Sbjct: 1000 VFYGLNREGKH 1010
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYS--LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
+ + K + L+P S + + V + + +++ A + EM+ SGF P+ +
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 352 FTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
+ G C+ G +A + + G P + + I G+LEE L + G
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYS-IYIRALCRIGKLEEALSELASFEGE 848
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
+ ++ +V L + D+++A + + + G PG Y+ LI + + ++++V
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
L+ +ME +S P + +T++I GK+E+A + M+ R +PD Y I
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 532 HEQKGNNARVLQLCNEM 548
Q + L+L +EM
Sbjct: 969 LCQACKSEDALKLLSEM 985
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 186/491 (37%), Gaps = 92/491 (18%)
Query: 60 SLELNDSLVEQVLLE-LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLIT 118
S +VE VL K P+ A+ FF+W + F+H V Y+ + + AG
Sbjct: 150 SFRFEPEIVENVLKRCFKVPH---LAMRFFNWVKQKDGFSHRVGIYNTMLSI---AG--- 200
Query: 119 DARAL-----LESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTE 173
+AR L L S KN +R T +L+ Y K +
Sbjct: 201 EARNLDMVDELVSEMEKNGCDKDIRTWT-------------------ILISVYGKAKKIG 241
Query: 174 AAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMI 233
V + GF + ++N ++ L + R L + Y+ M+ T K+++
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 234 DALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAV 293
D + K VD + I + ++R+ E + E
Sbjct: 302 DCIAK----SEKVDVVQSIADD----------------MVRICE----ISEH-------- 329
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
D+ GY ++ + G + ALE+ E+ ++ +
Sbjct: 330 ----------------DAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKP---YGETFDHVIIGCAAGSGRLEECLGVFEAMLG 410
G C+ R+ +A+E++ M+ R L YG +II + + L FE +
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLDDSNVYG-----IIISGYLRQNDVSKALEQFEVIKK 426
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
+G P ++ ++++ L + + E+ +++ G P + ++ G+ + V E
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
K++ ME K + P ++ ++ LCR + ++ K M + + I+ +I+
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVIS 546
Query: 531 SHEQKGNNARV 541
S E+ G ++
Sbjct: 547 SMEKNGEKEKI 557
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 117/293 (39%), Gaps = 38/293 (12%)
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
MV L+ + + D +++++ + + L ++E+M SGFE ++ Y
Sbjct: 207 MVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMI 266
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
C GR D A+E + M +G+ +G +++ C A S +++ + + M+
Sbjct: 267 RSLCIAGRGDLALEFYKEMMEKGI-TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICE 325
Query: 414 IPSCLSFDKMVEKLCENRDVEQA--------------NANLTRLLDKGF----------- 448
I +F +++ C + +++A +A +L KG
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE 385
Query: 449 ---------LPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L Y ++I GY + +V + L+ + ++ P +S +T ++Q L +
Sbjct: 386 IVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
+ E M + PD ++A H G N RV + +S+E
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGH--LGQN-RVAEAWKVFSSME 495
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 158/389 (40%), Gaps = 53/389 (13%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
++ + + R A + ++++G + S+N+++H L + + + E
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+P+ T K+++++LCKE + + L+ L+LR
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLE--------------------LMLR------- 405
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+E R R+ Y++ + + + L + M+
Sbjct: 406 -KEGADRTRI----------------------YNIYLRGLCVMDNPTEILNVLVSMLQGD 442
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRGLKPYGETFDHVIIGCAAGSGRLEE 400
P+ + + G CK GR+D+AM+++ M G+ P T + V+ G A GR EE
Sbjct: 443 CRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLA-QGRAEE 501
Query: 401 CLGVFEAMLGAGFI-PSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
L V ++ I P ++++ ++ L + ++A + +L TTY+++I
Sbjct: 502 ALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIII 561
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
G +V K + ++ + S V+ + ++ LC+ G L DA +L +
Sbjct: 562 DGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAI 621
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEM 548
P+V Y T+IA + G Q+ EM
Sbjct: 622 PNVVCYNTVIAECSRSGLKREAYQILEEM 650
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 3/188 (1%)
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
D AL + + + + G+ P+S +S C GR DEA G P T + V
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN-V 130
Query: 388 IIGCAAGSGRLEECLGVFEAMLG--AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
II S LGV ++G F+PS ++++++ +LC V A+ + + +
Sbjct: 131 IIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRN 190
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+G LP T++ LI GY E++ K++ EM + P + +I + +E
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVET 250
Query: 506 AEKYLKTM 513
K +K +
Sbjct: 251 GRKLMKEL 258
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 32/363 (8%)
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
+SD V D E R R+ + + I ++C ++RN D RI+ +
Sbjct: 31 KSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICA---VRRNPDEALRILDGLCLRGYR 87
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P ++ SS+I + + G +E R + L +PD ++I+ +
Sbjct: 88 PDSLNLSSVIHSLCDAGRF--DEAHRRFLL---------FLASGFIPDERTCNVIIARLL 136
Query: 323 RLGSLDSALEMYEEMV--MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPY 380
S S L + ++ F P+ Y C R+ +A +L+ M RG P
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
TF +IG LE VF+ M G P+ L+ ++ + RDVE +
Sbjct: 197 VVTFT-TLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLM 255
Query: 441 TRLLDKGFLPGETTYSL-------LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV---F 490
L + ++ ET S+ L+ +G ++ ++ M S+C ++V +
Sbjct: 256 KELWE--YMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM---SLCESVNVEFAY 310
Query: 491 TSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
+I LCR + A + + MKS+ L P Y +I + G R QL E +
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE 370
Query: 551 LEL 553
E
Sbjct: 371 FEF 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 119/329 (36%), Gaps = 101/329 (30%)
Query: 308 VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGF----------- 356
+PD V ++ ++ + L+ A ++++EM + G PNS + GGF
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 357 -----------------------------CKEGRIDEAMELMRGM---EGRGLK-PYGET 383
C+EG ++ E+ M E ++ YG
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM 313
Query: 384 FDHVIIGCAA----GSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
D + C G+ R + M G P S++ ++ LC++ +A
Sbjct: 314 IDSL---CRYRRNHGAAR------IVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRA--- 361
Query: 440 LTRLLDKG----FLPGETTYSLLIKGYAAK---GEVQEVLKLY-----------YEMEYK 481
+LL++G F P E TY LL++ + G+ + VL+L Y + +
Sbjct: 362 -YQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 482 SMC---------------------PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS-RLLT 519
+C P +VI LC+ G+++DA K L M + +
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA 480
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEM 548
PD T++ +G L + N +
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRV 509
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 325 GSLDSALEMYEEMVMS-GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G + A++ + EM S G + ++ S KE I+ A E+ + +KP T
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDART 275
Query: 384 FDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
F+ +I G C A + ++ + + M F P +++ VE C+ D + N L
Sbjct: 276 FNILIHGFCKAR--KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+ + G P TY++++ +V E L +Y +M+ P ++S+I L + G+
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
+DA + + M ++ + DV +Y TMI++ + L+L M E
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 20/297 (6%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIM---IDALCKEGLL 242
G+ S ++N+++ VL + L+W++ M + VTL M + L K G
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEE-SKLVTLDTMSKVMRRLAKSGKY 219
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
+ VDA + K I +SL+ +V++ + E E LK
Sbjct: 220 NKAVDAF---LEMEKSYGVKTDTIAMNSLMDALVKENSI---EHAHE-------VFLK-- 264
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
L + PD+ +++++H + D A M + M ++ F P+ YTSF +CKEG
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
E++ M G P T+ +++ S ++ E LGV+E M G +P +
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYT-IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 423 MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
++ L + + A + ++G Y+ +I + L+L ME
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 205/507 (40%), Gaps = 57/507 (11%)
Query: 34 VDDVAAAICDSFRRR-RSWDAVSRKFGSLEL--NDSLVEQVLLELKDPNDAKTALSFFHW 90
V+D+ +CD ++ S + V ++ ++ +SLV QVL N A FF W
Sbjct: 99 VEDIDK-VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFS--NGWNQAYGFFIW 155
Query: 91 SAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGF 150
+ + H +Y+ + VL G + + E + N++ + D++ +
Sbjct: 156 ANSQTGYVHSGHTYNAMVDVL---GKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRR 212
Query: 151 V--SGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVS 208
+ SG + +D ++ E ++ G + + NS++ L + + +
Sbjct: 213 LAKSGKYNKAVDAFLEM-------EKSY---------GVKTDTIAMNSLMDALVKENSIE 256
Query: 209 LVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVN 268
+V+ + P+A T I+I CK R D +M K + +P +
Sbjct: 257 HAHEVFLKLFDTIK-PDARTFNILIHGFCK----ARKFDDARAMMDLMKVTEFTPDVVTY 311
Query: 269 SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLD 328
+S + + EG RV M L+ + + P+ V Y++++H+ + +
Sbjct: 312 TSFVEAYCK-------EGDFRRVNEM----LEEMRENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
AL +YE+M G P++ Y+S K GR +A E+ M +G++ ++ +
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYN-TM 419
Query: 389 IGCAAGSGRLEECLGVFEAML---GAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
I A R E L + + M G P+ ++ +++ C + ++ L ++
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+TY LLI+G G+V+E + E K M P S C L D
Sbjct: 480 NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST----------CKMLVD 529
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASH 532
+ +++L + +TMI SH
Sbjct: 530 ELEKKNMAEAKLKIQSLVQSKTMIDSH 556
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 45/290 (15%)
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVA--VMVVTLLKRLLQQNLVPDSVGYSLIVHA 320
P S I + KG++ K RVA ++ ++R +N PD V Y+ +V A
Sbjct: 407 PKVFAPDSRIYTTLMKGYM-----KNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSA 461
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRGLKP 379
V G +D A ++ EM G N Y G+CK+ +ID A +L+R M E G++P
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
+++ +I G C+ D D A A
Sbjct: 522 DVVSYNIIIDG--------------------------CILID----------DSAGALAF 545
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP-GLSVFTSVIQCLC 498
+ +G P + +Y+ L+K +A G+ + +++ EM L + +++ C
Sbjct: 546 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC 605
Query: 499 RCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
R G +EDA++ + MK P+VA Y ++ Q L L E+
Sbjct: 606 RLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 18/315 (5%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
P ++ MIDA + G L+ DA M E P A+ S L+ + +G E
Sbjct: 702 PGKSVIRSMIDAYVRCGWLE---DAYGLFM-ESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
E + + L++N+ D+VGY+ ++ A + G L A E+YE M SG
Sbjct: 758 AE-----------HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
+ Y + + + ++D+A+E+ GL + + ++I+ G G++ E L
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG-GKMSEALS 865
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK-GFLPGETTYSLLIKGY 462
+F M G P S++ MV K+C + L + +++ G +TY LI+ Y
Sbjct: 866 LFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
A + E K ++ K + S F+S++ L + G +E+AE+ M ++PD
Sbjct: 925 AESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDS 984
Query: 523 AIYETMIASHEQKGN 537
A T++ + G+
Sbjct: 985 ACKRTILKGYMTCGD 999
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG---CA-AGSGR 397
+ P+ VYT + + G+I A E M G +P D V G C A GR
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP-----DAVACGTMLCTYARWGR 238
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
L ++A+ + S ++ M+ L + + ++++G P E TY+L
Sbjct: 239 HSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTL 298
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
++ YA +G +E LK + EM+ P ++SVI + G E A + M+S+
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ P TM++ + + N + L L +M
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 151/363 (41%), Gaps = 34/363 (9%)
Query: 198 LHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN------------ 245
+H++ + D+ V +V + + + L +M++ KEG L
Sbjct: 582 MHIVNKHDKHEAVLNVSQL--------DVMALGLMLNLRLKEGNLNETKAILNLMFKTDL 633
Query: 246 -VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVM----VVTLLK 300
A++R++ R A + + +I+R+ G +EEE +AV + K
Sbjct: 634 GSSAVNRVISSFVREGDVSKAEMIADIIIRL---GLRMEEETIATLIAVYGRQHKLKEAK 690
Query: 301 RLLQQNLVPDSVGYSLI---VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
RL + G S+I + A VR G L+ A ++ E G +P + +
Sbjct: 691 RLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT 750
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
G+ EA + R + ++ ++ +I +G+L+ ++E M +G S
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYN-TLIKAMLEAGKLQCASEIYERMHTSGVPCSI 809
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+++ M+ +++A + G E Y+ +I Y G++ E L L+ E
Sbjct: 810 QTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSE 869
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKL-EDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
M+ K + PG + +++ +C +L + ++ L+ M+ D++ Y T+I + +
Sbjct: 870 MQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESS 928
Query: 537 NNA 539
A
Sbjct: 929 QFA 931
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 119/294 (40%), Gaps = 12/294 (4%)
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
S+ PS +V +++LR+ G+ ++ + T L+ +L+ PD+V ++
Sbjct: 183 SYRPSVVV-YTIVLRLY---------GQVGKIKMAEETFLE-MLEVGCEPDAVACGTMLC 231
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
R G + L Y+ + ++ VY K+ + ++L M G+ P
Sbjct: 232 TYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPP 291
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
T+ +++ A G EE L F M GF+P +++ ++ + D E+A
Sbjct: 292 NEFTYT-LVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
+ +G +P T + ++ Y + L L+ +ME + + +I+ +
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
G DA+ + + L D Y M H GN + L + M + ++
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDI 464
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKV-RLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
V++ ++L+ N P + I+ V G L A E+++ + G PN+ Y
Sbjct: 138 VLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLM 197
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
FC + A +L M R + P +++ +I G G++ + + + ML GF
Sbjct: 198 QAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR-KGQVNGAMELLDDMLNKGF 256
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
+P LS+ ++ LC + +A L R+ KG P Y+ +I G+ + + K
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARK 316
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ +M P + ++I LC G ++ +KYL+ M S+ +P ++ ++
Sbjct: 317 VLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 163/387 (42%), Gaps = 41/387 (10%)
Query: 68 VEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRA---GLITDARA-- 122
V++++ DP AK F ++++ F H S+ I I L R LI D A
Sbjct: 54 VQKLIASQSDPLLAK---EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKH 110
Query: 123 -------------LLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSH-RPVLDLLVQTYAK 168
L + A+ + P V + +++ H +LD+LV
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 169 MRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVT 228
+ + AF++ + G + S+N ++ +D +S+ + ++ M+ P+ +
Sbjct: 171 L---QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 229 LKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKR 288
KI+I C++G + ++ LD ++ + P + ++L+ + K L E
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNK----GFVPDRLSYTTLLNSLCRKTQLRE----- 278
Query: 289 ERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV 348
LL R+ + PD V Y+ ++ R A ++ ++M+ +G PNS
Sbjct: 279 ------AYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 349 YTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
Y + GG C +G DE + + M +G P+ + ++ G + G++EE V E +
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS-FGKVEEACDVVEVV 391
Query: 409 LGAGFIPSCLSFDKMVEKLCENRDVEQ 435
+ G +++ ++ +C + E+
Sbjct: 392 MKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
SG+ ++T + + ++ + M P + + ++ + G L+
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ +F++ G +P+ S++ +++ C N D+ A ++L++ +P +Y +LI
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
+G+ KG+V ++L +M K P +T+++ LCR +L +A K L MK +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 520 PDVAIYETMIAS--HEQKGNNAR 540
PD+ Y TMI E + +AR
Sbjct: 293 PDLVHYNTMILGFCREDRAMDAR 315
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 1/202 (0%)
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
++P++ Y+L++ A L A +++ +M+ P+ Y GFC++G+++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
AMEL+ M +G P ++ ++ +L E + M G P + ++ M+
Sbjct: 244 AMELLDDMLNKGFVPDRLSYT-TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
C A L +L G P +Y LI G +G E K EM K
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 485 PGLSVFTSVIQCLCRCGKLEDA 506
P SV +++ C GK+E+A
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEA 384
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L +L++ + PD+ ++ I+ + G A+E +E+M G EP++ + +
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ G +D A+ L + TF +I SG + CL ++E M G P+
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFS-TLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+ ++++++ + + QA L+ GF P +TY+ L++ Y + L +Y E
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKS-RLLTPDVAIYETMIASHEQKG 536
M+ K + + ++ +++ +++A + + MK+ PD + ++I + G
Sbjct: 376 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 19/330 (5%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
+N + V ++S + +++ M+ P+ T +I + G+ +R V+ +++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
P + +++I G++ M ++L R + D+V
Sbjct: 237 ---SSFGCEPDNVTMAAMIDAYGRAGNVD-----------MALSLYDRARTEKWRIDAVT 282
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
+S ++ G+ D L +YEEM G +PN +Y + R +A + + +
Sbjct: 283 FSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI 342
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRL-EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
G P T+ ++ A G R ++ L ++ M G + + ++ ++ +NR
Sbjct: 343 TNGFTPNWSTYAALVR--AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 433 VEQANANLTRLLD-KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
V++A + + + P T+S LI YA G V E +M P L V T
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
SVIQC + +++D + + +TPD
Sbjct: 461 SVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 34/295 (11%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
RG + A+F +++ +++ + +E M P+ VT+ MIDA + G +
Sbjct: 204 RGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDM 263
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLI------------LRMVEK-------------G 279
+ DR E+ R A+ S+LI L + E+
Sbjct: 264 ALSLYDRARTEKWRI----DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
L++ G+ +R + K L+ P+ Y+ +V A R D AL +Y EM
Sbjct: 320 RLIDSMGRAKR-PWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKE 378
Query: 340 SGFEPNSFVYTSFTGGFCKEGR-IDEAMELMRGMEG-RGLKPYGETFDHVIIGCAAGSGR 397
G +Y + C + R +DEA E+ + M+ P TF +I A SGR
Sbjct: 379 KGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT-VYACSGR 436
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
+ E M AGF P+ +++ + + V+ ++L+ G P +
Sbjct: 437 VSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
F K ++++ +L M RG+KP TF II CA +G + + FE M G P
Sbjct: 185 FRKSKDLEKSEKLFDEMLERGIKPDNATFT-TIISCARQNGVPKRAVEWFEKMSSFGCEP 243
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++ M++ +V+ A + R + + T+S LI+ Y G L +Y
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQK 535
EM+ + P L ++ +I + R + A+ K + + TP+ + Y ++ ++ +
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 536 GNNARVLQLCNEM 548
L + EM
Sbjct: 364 RYGDDALAIYREM 376
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 21/352 (5%)
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID-ALCKEGLLQRN 245
++ S ++N+ L VL R + V+ W V + M + Y + I + K ++
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEM-KTAGYDMDLDTYIKVSRQFQKSRMMAET 317
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V + +M PS I + SL+LR + G +V + ++
Sbjct: 318 VKLYEYMMD----GPFKPS-IQDCSLLLRYLS--------GSPNPDLDLVFRVSRKYEST 364
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
Y I + +G D A E+ + M +G+EP++ Y+ G CK R++EA
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
++ ME +G P +T+ ++I + L++ L F ML GF D +++
Sbjct: 425 RGVLDQMEAQGCFPDIKTWT-ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLID 483
Query: 426 KLCENRDVEQANANLTRLLDKGFL-PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
+ E A+ L ++ + P ++TY LLI + +E L L M+ ++
Sbjct: 484 GFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP 543
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
F L + G LEDA+K+L + S+ +P A Y +I + ++G
Sbjct: 544 AYAEAFDGY---LAKFGTLEDAKKFLDVLSSK-DSPSFAAYFHVIEAFYREG 591
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 137/335 (40%), Gaps = 17/335 (5%)
Query: 176 FDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDA 235
+ V ++ G+ + L ++ V Q+S ++ +YE+M+ G P+ +++
Sbjct: 283 WSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRY 342
Query: 236 LCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMV 295
L G ++D + R+ + + + S S V + + G E E
Sbjct: 343 LS--GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAE---------- 390
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ K + PD++ YS +V + L+ A + ++M G P+ +T G
Sbjct: 391 -EITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQG 449
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
CK +D+A+ M +G D +I G + + + E + A P
Sbjct: 450 HCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKP 509
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++ +++KL + + E+A +L +++ K P Y+ GY AK E K +
Sbjct: 510 WQSTYKLLIDKLLKIKKSEEA-LDLLQMMKKQNYPA---YAEAFDGYLAKFGTLEDAKKF 565
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
++ P + + VI+ R G+L DA+ L
Sbjct: 566 LDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 169/429 (39%), Gaps = 57/429 (13%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L++ Y K A + + R F + FN+++H + + ++ MI+
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 222 NYPNAVTLKIMIDALCKEGL----------------LQRNVDAL-DRIMGERKRSSHSPS 264
N T IMI + CKEG + RNV + I G K+ +
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 265 ----------AIVNSSL----ILRMVEKGH----------------------LVEEEGKR 288
IV + +L+M+ K H ++++ G
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNI 457
Query: 289 ERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV 348
E V V +LL + +++ +VG +++ A + +AL E+MV G P F
Sbjct: 458 E---VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 349 YTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
Y S +E I++ L+ ++ P +T+ V+ + R + + +AM
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR-DAAFAIIDAM 573
Query: 409 LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEV 468
G P+ + ++ L + V +A ++L+ G P E Y ++I YA G +
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 469 QEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETM 528
E +L E+ + P +T +I + G +E +YL M L+P+V +Y +
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 529 IASHEQKGN 537
I +KG+
Sbjct: 694 IGHFLKKGD 702
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 166/423 (39%), Gaps = 62/423 (14%)
Query: 161 LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
++V K +AAF + +E G R ++A ++S++ L + RV + + M+
Sbjct: 552 IVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES 611
Query: 221 RNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGH 280
P+ + IMI+ + G +D + ++ E + PS+ + LI V+ G
Sbjct: 612 GIQPDEIAYMIMINTYARNG----RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
+ E+G L ++L+ L P+ V Y+ ++ ++ G + ++ M +
Sbjct: 668 M--EKG---------CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 341 GFEPNSFVYTSFTGGFCKE--------------------------------------GRI 362
+ + Y + G + G
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK 776
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
AME++ G + + P + +I G CAAG RL+E E+M G +P+ +++
Sbjct: 777 SFAMEVI-GKVKKSIIPNLYLHNTIITGYCAAG--RLDEAYNHLESMQKEGIVPNLVTYT 833
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+++ E D+E A + P + YS L+KG + L L EM+
Sbjct: 834 ILMKSHIEAGDIESA---IDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKS 890
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA--IYETMIASHEQKGNNA 539
+ P + ++QCLC +A K +K M + + P + I E+K A
Sbjct: 891 GINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Query: 540 RVL 542
R L
Sbjct: 951 RAL 953
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 131/319 (41%), Gaps = 9/319 (2%)
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE-----KGHLVEEEG 286
+I L + GLL + + R++ SS S +A+V + +E G L+ +
Sbjct: 49 LIVKLGRRGLLDSAREVIRRVID--GSSSISEAALVADFAVDNGIELDSSCYGALIRKLT 106
Query: 287 KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNS 346
+ + V +R++ +VPDS +V V+L D A + ++ SG+ P+
Sbjct: 107 EMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSR 166
Query: 347 FVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFE 406
+ C + R EA ++ RG + + G G G L E +G+ +
Sbjct: 167 NSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKG-LCGHGHLNEAIGMLD 225
Query: 407 AMLGAGFIPSCLSFDK-MVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+ G +P ++ K + C+ +A A + G+ + Y+ L+K Y
Sbjct: 226 TLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKD 285
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
+ ++LY M +S +F ++I + G L+ M + + +V Y
Sbjct: 286 NNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTY 345
Query: 526 ETMIASHEQKGNNARVLQL 544
MI S+ ++GN L+L
Sbjct: 346 HIMIGSYCKEGNVDYALRL 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/471 (19%), Positives = 175/471 (37%), Gaps = 54/471 (11%)
Query: 134 PGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLAS 193
PG + + G V S VLD +V K+R + A + A G+ S S
Sbjct: 111 PGVAETFYNQRVIGNGIVPDSS--VLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNS 168
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
+ V+ L DR + +E + + K + LC G L + LD +
Sbjct: 169 SSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLC 228
Query: 254 GERKRS-------------SHSPSAIVNSSLILRMVEKGHLVEE--------EGKRERVA 292
G + A +L M G+ V++ E ++
Sbjct: 229 GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNM 288
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
M + L R+++++ D ++ ++H ++LG LD M+ +M+ G + N F Y
Sbjct: 289 TMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIM 348
Query: 353 TGGFCKEGRIDEAMELMRGMEG-RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA 411
G +CKEG +D A+ L G + + ++I G G +++ + + ML
Sbjct: 349 IGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG-MDKAVDLLMRMLDN 407
Query: 412 GFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF-------------------LPGE 452
G +P +++ +++ L + +++ A L +LD G L GE
Sbjct: 408 GIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGE 467
Query: 453 TT----------YSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+++ ++ L +M P + SVI+CL +
Sbjct: 468 IARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENI 527
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+ED + ++ PDV Y ++ +K + + + M L L
Sbjct: 528 IEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
L+ + ++ +VP+ V Y++++ + + G ++SA++++E + EP+ +Y++ G C
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCD 873
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
R +A+ LM M+ G+ P ++++ ++ C S E + V + M P +
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEK-LLQCLCYSRLTMEAVKVVKDMAALDIWPRSI 932
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKG 447
+ ++ LCE + + +A A ++ G
Sbjct: 933 NHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ LL QQ P+ + +S ++ G + A ++ E M EP++ + G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
K+GR++E ++L+ M+ +G +P T+ V+ G L E + M+ G P
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL-EAKEMMSQMISWGMRP 340
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKG 466
S LS+ KMV LCE + V + + L ++++ GF+P + +++ +K
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D+ ++++ G+L++AL++ +E PN ++ GFC +G+ +EA +L+
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
ME ++P TF+ +I G GR+EE + + E M G P+ ++ +++ L +
Sbjct: 261 ERMEKERIEPDTITFNILISGLRK-KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ +A +++++ G P +Y ++ G V E+ + +M P +
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLM 379
Query: 490 FTSVIQCL 497
+ V+QC+
Sbjct: 380 WWKVVQCV 387
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF--EAMLGAGFIPSC 417
GRI+ A+E++ GM G P ++F+ I+ + +E +F LG C
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNF-ILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
L+ +++ LCE+ ++E A L + P T+S LI+G+ KG+ +E KL
Sbjct: 205 LNI--LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
ME + + P F +I L + G++E+ L+ MK + P+ Y+ ++ K
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Query: 538 NARVLQLCNEMAS 550
N ++ ++M S
Sbjct: 323 NLEAKEMMSQMIS 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 136/345 (39%), Gaps = 15/345 (4%)
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
N VL + S + Y+H + ++Y P +MI+ + + ++ + R +
Sbjct: 63 NEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYD-EIEEVMRTI 121
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
KR S N ++R+ G+L G+ R + +L + P S
Sbjct: 122 KLEKRCRFSEEFFYN---LMRIY--GNLA---GRINRA----IEILFGMPDFGCWPSSKS 169
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++ I++ V D +++ G E ++ G C+ G ++ A++L+
Sbjct: 170 FNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFP 229
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
+ +P TF +I G G+ EE + E M P ++F+ ++ L + V
Sbjct: 230 QQKSRPNVMTFSPLIRG-FCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
E+ L R+ KG P TY ++ G K E ++ +M M P + +
Sbjct: 289 EEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKM 348
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+ LC + + + L+ M + P ++ ++ K N+
Sbjct: 349 VLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNND 393
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 58/288 (20%)
Query: 152 SGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVW 211
S S +L+LLV +L + + + G + N ++ L S +
Sbjct: 167 SKSFNFILNLLVSA----KLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAAL 222
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL 271
+ + + ++ PN +T +I C +G + L+R+ ER P I + L
Sbjct: 223 QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER----IEPDTITFNIL 278
Query: 272 ILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL 331
I + +KG + EEG +
Sbjct: 279 ISGLRKKGRV--EEG--------------------------------------------I 292
Query: 332 EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG- 390
++ E M + G EPN Y G + R EA E+M M G++P ++ +++G
Sbjct: 293 DLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGL 352
Query: 391 CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE-KLCENRDVEQAN 437
C S + E V M+ GF+P L + K+V+ + +N D QAN
Sbjct: 353 CETKS--VVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQAN 398
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 160/393 (40%), Gaps = 52/393 (13%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
+L+ L+ + K+ ++AAFDV E GF + ++ L L + + V E M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
++ + +I CKEG + + + + K S P + ++LI
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYE--LAKTKEKSLPPRFV--ATLIT---- 344
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
L + +G M+ L ++ + P +S ++H+ R+ ++ A + +M
Sbjct: 345 --ALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDM 398
Query: 338 VMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGR 397
+ G P + V+ K G +DEA E+++ ME RGLKP T+ +I G A G
Sbjct: 399 ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG-- 456
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
D+ E L E + K P TY
Sbjct: 457 ---------------------MMDEAQEILAEAKKKH-----------KKLSP--VTYHA 482
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLC-RCGKLEDAEKYLKTMKSR 516
LI+GY E E LKL EM+ + P + +IQ C + E AE + MK +
Sbjct: 483 LIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
L + AI + +I + ++ + A+V + N +A
Sbjct: 543 GLHLN-AISQGLIRAVKEMESEAKVTEDGNLLA 574
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 32/294 (10%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLL--------------------QQNLVPDSVGYSLIVHA 320
LV+E G++E V+ + +L L+ + P++ Y L + A
Sbjct: 216 LVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEA 275
Query: 321 KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM---ELMRGMEGRGL 377
+ +D A + E+M+ SG + FCKEG+ +EA EL + E + L
Sbjct: 276 LCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE-KSL 334
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
P +I G + + + G F ++ LC R+V+ A
Sbjct: 335 PP--RFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAK 392
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKG---EVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
A L ++ KG PG ++L++ + G E +EVLKL ME + + P + +T +I
Sbjct: 393 ALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL---MESRGLKPDVYTYTVII 449
Query: 495 QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ G +++A++ L K + Y +I + + L+L NEM
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 503
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 155/388 (39%), Gaps = 54/388 (13%)
Query: 143 SLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQ 202
S + A +P L LV + F C +A FR ++A + + L
Sbjct: 25 SAVTAAAATPSPPKPSLITLVNDERDPKFITEKFKKAC--QAEWFRKNIAVYERTVRRLA 82
Query: 203 RSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHS 262
+ + V ++ E YPN + KEG + R ++ R+
Sbjct: 83 AAKKFEWVEEILEEQ---NKYPN----------MSKEGFVARIINLYGRV---------- 119
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
M E V +E + ++N ++ ++ +++A V
Sbjct: 120 -----------GMFENAQKVFDE----------------MPERNCKRTALSFNALLNACV 152
Query: 323 RLGSLDSALEMYEEMVMS-GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYG 381
D +++E+ EP+ Y + G C +G EA+ L+ +E +GLKP
Sbjct: 153 NSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDH 212
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
TF+ +++ + G+ EE ++ M+ S++ + L E+ +
Sbjct: 213 ITFN-ILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFD 271
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
+L P T++ +IKG+ ++G++ E + Y E+E P VF S++ +C+ G
Sbjct: 272 KLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMI 529
LE A + K + ++ L D A+ + ++
Sbjct: 332 DLESAYELCKEIFAKRLLVDEAVLQEVV 359
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 135/346 (39%), Gaps = 41/346 (11%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
+ D D K F + + F + Y + L A +LE +N+ P
Sbjct: 45 VNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEE---QNKYP 101
Query: 135 GAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASF 194
+ GFV+ ++ Y ++ + E A V + R + + SF
Sbjct: 102 NMSKE---------GFVAR--------IINLYGRVGMFENAQKVFDEMPERNCKRTALSF 144
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
N++L+ S + LV +++ + + P+ + +I LC +G V +D I
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 254 GERKRSSH-SPSAIVNSSLILRMVEKGH-----LVEEEGKR--------------ERVAV 293
+ + H + + +++ S E+G +VE+ KR E +
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
+V+L +L L PD ++ ++ V G LD A+ Y+E+ +G P FV+ S
Sbjct: 265 EMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
CK G ++ A EL + + + L V+ GS + E
Sbjct: 325 PAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 4/241 (1%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D++ YS I+ R + A+E +E M +G P+ Y++ + K G+++E + L
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLY 279
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAG-SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
G KP F ++G G +G + V + M P+ + ++ ++E +
Sbjct: 280 ERAVATGWKPDAIAFS--VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMG 337
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
A + +L+ G P E T + L+K Y ++ L+L+ EM+ K
Sbjct: 338 RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFI 397
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQLCNE 547
++ +++ G E+AE+ MK + PD Y M+ + G + ++L E
Sbjct: 398 LYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Query: 548 M 548
M
Sbjct: 458 M 458
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 108/272 (39%), Gaps = 37/272 (13%)
Query: 286 GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPN 345
KR + + +R+ + L+PD V YS I+ + G ++ L +YE V +G++P+
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 346 SFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVF 405
+ ++ F + G D +++ M+ +KP ++ ++ +G+ +F
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN-TLLEAMGRAGKPGLARSLF 349
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQA-------------------NANLTRLLDK 446
ML AG P+ + +V+ + R A N L D
Sbjct: 350 NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409
Query: 447 GF-----------------LPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
G P +Y+ ++ Y + G+ ++ ++L+ EM + +
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
T ++QCL + +++D R + PD
Sbjct: 470 CTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 133/332 (40%), Gaps = 42/332 (12%)
Query: 61 LELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDA 120
+EL++ ++ K N A+ +F KT V +YS + V ++G + +
Sbjct: 217 VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEV-TYSAILDVYSKSGKVEEV 275
Query: 121 RALLESLAAKNRDPGAVR-AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVC 179
+L E A P A+ +V + G G + ++Q M DV
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG-----IRYVLQEMKSM-------DVK 323
Query: 180 CNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKE 239
NV +N++L + R+ + L ++ M+ PN TL ++ K
Sbjct: 324 PNV---------VVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
+ DAL + E ++ P + + +L M L EEE +R + +
Sbjct: 375 RWAR---DALQ--LWEEMKAKKWPMDFILYNTLLNMCADIGL-EEEAER------LFNDM 422
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
K +Q PD+ Y+ +++ G + A+E++EEM+ +G + N T K
Sbjct: 423 KESVQCR--PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA 480
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGC 391
RID+ + + RG+KP D + GC
Sbjct: 481 KRIDDVVYVFDLSIKRGVKP-----DDRLCGC 507
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 295 VVTLLKRLL--QQNLVPDSVGYSLIVHAKVRL--GSLDSALEMYEEMVMSGFEPNSFVYT 350
V L + +L Q N P + +++ R S+ + + MV +G EP+
Sbjct: 104 TVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG------- 403
C+ GR+DEA +LM+ + + P T++ ++ L +C
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL-------KHLCKCKDLHVVYEF 216
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
V E P +SF +++ +C ++++ +A +++L + GF P Y+ ++KG+
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
+ E + +Y +M+ + + P + ++I L + G++E+A YLKTM PD A
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 524 IYETMIASHEQKG 536
Y +++ +KG
Sbjct: 337 TYTSLMNGMCRKG 349
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 49/227 (21%)
Query: 317 IVHAKVRLGSLDSALEMYEEMV-MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
++ A V G++D AL M+ EM G +S Y + G K RIDEA +++
Sbjct: 83 VLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQML------ 136
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECL--GVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
ET ++ G AAG+ +L L G+ +A++ AG D+
Sbjct: 137 ------ETIEY---GTAAGTPKLSSSLIYGLLDALINAG-------------------DL 168
Query: 434 EQANANLTR----LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+AN L R LLD G P Y+LL+KGY Q + L EM + P
Sbjct: 169 RRANGLLARYDILLLDHG-TPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLT 227
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSR-------LLTPDVAIYETMI 529
+ ++I +CG L+ A K+ MK + L PDV Y T++
Sbjct: 228 YNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLV 274
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V +L K++ ++PD+ ++I+ A + +D A+ +++EM + G EPN++ Y+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
G C++GR+ + + + M+ +G+ P G + V+I + RL+E + V ML
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCY-MVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 415 PSCLSFDKMVEKLC 428
P L+++ ++ +LC
Sbjct: 326 PDMLTYNTVLTELC 339
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 406 EAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAK 465
+ M G IP + +++ + +V++A + G P TYS L+KG K
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 466 GEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIY 525
G V + L Y EM+ K M P S + +I L +L++A + + M + L+PD+ Y
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 526 ETMIASHEQKGNNARVLQLCNE 547
T++ + G + L++ E
Sbjct: 332 NTVLTELCRGGRGSEALEMVEE 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 368 LMRGMEGRGLKPYGETFD-HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L + M+ G+ P +TF ++II A ++E + VF+ M G P+ ++ +V+
Sbjct: 210 LTKQMKSNGVIP--DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKG 267
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
+CE V Q + KG +P + Y +LI + + + E +++ Y+M S+ P
Sbjct: 268 VCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
+ + +V+ LCR G+ +A + ++ K R
Sbjct: 328 MLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 71 VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAK 130
V++ L+ +D AL F W+A+ + H +Y H +++ + +E+L
Sbjct: 78 VVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAY----HTMIKQAITGKRNNFVETL--- 130
Query: 131 NRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQ-TYAKMRLTEAAFDVCCN-VEARGFR 188
+ + + P+ + +++ + L AFDV + + +
Sbjct: 131 -------------IEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSK 177
Query: 189 VSLASFN-SVLHVLQRSDRVSLVWDVYEHMIRGRN--------YPNAVTLKIMIDALCKE 239
L ++ + +L+R +++++ + VY H +R P+ L ++I A K
Sbjct: 178 PDLETYTLLLSSLLKRFNKLNVCY-VYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAK- 235
Query: 240 GLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
L+ VD R+ E P+A S L+ + EKG + + G
Sbjct: 236 -CLE--VDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLG-----------FY 281
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
K + + +VP+ Y +++ + LD A+E+ +M+ + P+ Y + C+
Sbjct: 282 KEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRG 341
Query: 360 GRIDEAMELMRGMEGR----GLKPYGETFDHV 387
GR EA+E++ + R G + Y D V
Sbjct: 342 GRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 19/322 (5%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIM 253
F LH+L R W + + ++YPN ++ K M LCK + L+ +
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 254 GERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
K + +++LR E E K R ++ ++L PD
Sbjct: 164 KMEKEIFRKKFGVDEFNILLR----AFCTEREMKEAR------SIFEKL-HSRFNPDVKT 212
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++++ G + + Y EMV GF+PNS Y GFCK+ EA+ L M+
Sbjct: 213 MNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMD 272
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
+ +I G ++ + +F+ + G P C +++ ++ L + DV
Sbjct: 273 RLDFDITVQILTTLIHGSGVARNKI-KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDV 331
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE--VQEVLKLYYEMEYKSMCPGLSVFT 491
A + + +KG P T+ + G E V + Y +M+ +S+ P
Sbjct: 332 SGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIV 391
Query: 492 SVIQCLCRCGKLE---DAEKYL 510
+++ C G++ D KY+
Sbjct: 392 MLMKLFCHNGEVNLGLDLWKYM 413
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 159 LDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMI 218
++L++ + R + A + + +R F + + N +L + + V+ Y M+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ PN+VT I ID CK +RN R+ + R + + ++LI
Sbjct: 238 KRGFKPNSVTYGIRIDGFCK----KRNFGEALRLFEDMDRLDFDITVQILTTLI-----H 288
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
G V + R L + ++ L PD Y+ ++ + ++ G + A+++ +EM
Sbjct: 289 GSGVARNKIKAR------QLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEME 342
Query: 339 MSGFEPNSFVYTSFTGGF--CKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG 396
G EP+S + S G KE + E + M+ R L P T +++ +G
Sbjct: 343 EKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIV-MLMKLFCHNG 401
Query: 397 RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
+ L +++ ML G+ P + + + LC R A + +++G E Y
Sbjct: 402 EVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYR 461
Query: 457 LL 458
+L
Sbjct: 462 ML 463
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV--YTSFTGGFCKEGRIDEAMELMRGM 372
S+++ + GS + LE + +M F V + FC E + EA + +
Sbjct: 143 SILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL 202
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
R P +T + +++G +G + + M+ GF P+ +++ ++ C+ R+
Sbjct: 203 HSR-FNPDVKTMNILLLGFKE-AGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRN 260
Query: 433 VEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK---LYYEMEYKSMCPGLSV 489
+A L D L + T +L G + +K L+ E+ + + P
Sbjct: 261 FGEA---LRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGA 317
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ +++ L +CG + A K +K M+ + + PD + +M
Sbjct: 318 YNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 187/459 (40%), Gaps = 50/459 (10%)
Query: 79 NDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVR 138
N + +L F S + R +++ I + +AG + DA L + K+ P
Sbjct: 283 NPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEML-KSGVP---- 337
Query: 139 AVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVL 198
ID V F + H T+ + E+ +E +G ++N +L
Sbjct: 338 ------IDTVTFNTMIHT------CGTHGHLSEAESLLK---KMEEKGISPDTKTYNILL 382
Query: 199 HVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
+ + + + Y + + +P+ VT + ++ LC+ ++ V ++ ++ E R
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ----RKMVAEVEAVIAEMDR 438
Query: 259 SS-----HSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVG 313
+S HS I+ V +G +V+ + ER Q + V S
Sbjct: 439 NSIRIDEHSVPVIMQ-----MYVNEGLVVQAKALFER------------FQLDCVLSSTT 481
Query: 314 YSLIVHAKVRLG-SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM 372
+ ++ G +++ Y + MSG + Y + K ++A+ L +GM
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 373 EGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRD 432
+ +G P T++ + AG ++E + ML +G P C ++ M+
Sbjct: 542 KNQGTWPDECTYNS-LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 433 VEQANANLTRLLDK-GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
+ A +L ++K G P E Y LI G+A G V+E ++ + ME + V T
Sbjct: 601 LSDA-VDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
S+I+ + G LE+A + MK PDVA +M++
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 183/450 (40%), Gaps = 45/450 (10%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+++ IH G +++A +LL+ + K P ++L
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDT--------------------KTYNIL 381
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ +A EAA + + G + +VLH+L + V+ V V M R
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
+ ++ +++ EGL+ + +R + SS + +A+++ EKG V
Sbjct: 442 RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV-----YAEKGLWV 496
Query: 283 EEE----GKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
E E GKR Q+N D + Y++++ A + + AL +++ M
Sbjct: 497 EAETVFYGKRNMSG-----------QRN---DVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
G P+ Y S +DEA ++ M G KP +T+ +I G L
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY-AAMIASYVRLGLL 601
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ + ++EAM G P+ + + ++ E+ VE+A + + G + L
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
IK Y+ G ++E ++Y +M+ P ++ S++ G + +AE ++ +
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREK-G 720
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEM 548
T DV + TM+ ++ G +++ EM
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 231 IMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRER 290
+MI A K L ++ AL G + + + NS + +M+ LV+E +
Sbjct: 520 VMIKAYGKAKLHEK---ALSLFKGMKNQGTWPDECTYNS--LFQMLAGVDLVDEAQR--- 571
Query: 291 VAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYT 350
+L +L P Y+ ++ + VRLG L A+++YE M +G +PN VY
Sbjct: 572 -------ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 351 SFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI----IGCAAGSGRLEECLGVFE 406
S GF + G ++EA++ R ME G++ +H++ I + G LEE V++
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQS-----NHIVLTSLIKAYSKVGCLEEARRVYD 679
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG------------------- 447
M + P + + M+ + V +A + L +KG
Sbjct: 680 KMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGM 739
Query: 448 ---------------FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY-KSMCPGLSVFT 491
L T+++ ++ YAA G++ E +L++EM + + F
Sbjct: 740 LDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFK 799
Query: 492 SVIQCLCRCGKLEDAEKYLKTMKSR---LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
++ L + G +A L+T + L TP AI T+ ++ G A L+ C E+
Sbjct: 800 TLFTLLKKGGVPSEAVSQLQTAYNEAKPLATP--AITATLFSAM---GLYAYALESCQEL 854
Query: 549 ASLEL 553
S E+
Sbjct: 855 TSGEI 859
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 173/411 (42%), Gaps = 30/411 (7%)
Query: 135 GAVRAVTDSLIDAVGFVSGSHRPVL----DLLVQTYAKM-RLTEAAFDVCCNVEARGFRV 189
GA + SL A G S +P L + L+ Y K RL +AA ++ + G +
Sbjct: 280 GARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAA-NLFSEMLKSGVPI 338
Query: 190 SLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDAL 249
+FN+++H +S + + M P+ T I++ G ++ ++
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 250 DRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVP 309
+I ++ P + + +++ + ++ + E E ++ + + ++
Sbjct: 399 RKI----RKVGLFPDTVTHRAVLHILCQRKMVAEVEA-----------VIAEMDRNSIRI 443
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D +I+ V G + A ++E + +S + + ++G EA +
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV-LSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 370 ---RGMEGRGLKPYGETFDHVIIGCAAGSGRL-EECLGVFEAMLGAGFIPSCLSFDKMVE 425
R M G+ + ++ ++ A G +L E+ L +F+ M G P +++ + +
Sbjct: 503 YGKRNMSGQ----RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQ 558
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
L V++A L +LD G PG TY+ +I Y G + + + LY ME + P
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
V+ S+I G +E+A +Y + M+ + + + ++I ++ + G
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 150/349 (42%), Gaps = 12/349 (3%)
Query: 201 LQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L +SD+ +V+ M + R Y P+ +I + K+G + + + E K S
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAM----WLFSEMKNS 162
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
P A V ++LI + H ++ E+V L K + P+ V Y++++
Sbjct: 163 GCRPDASVYNALITAHL---HTRDKAKALEKVRGY---LDKMKGIERCQPNVVTYNILLR 216
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
A + G +D +++++ MS P+ + + + K G I E ++ M KP
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
TF+ V+I E+ F++++ + P+ +F+ M+ + R +++A
Sbjct: 277 DIITFN-VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
++ D ++P TY +I Y G V +++ E+ S ++++ CR
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCR 395
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G +A+K + + PD + Y+ + ++ + +V L +M
Sbjct: 396 NGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 150/349 (42%), Gaps = 12/349 (3%)
Query: 201 LQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
L +SD+ +V+ M + R Y P+ +I + K+G + + + E K S
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAM----WLFSEMKNS 162
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVH 319
P A V ++LI + H ++ E+V L K + P+ V Y++++
Sbjct: 163 GCRPDASVYNALITAHL---HTRDKAKALEKVRGY---LDKMKGIERCQPNVVTYNILLR 216
Query: 320 AKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
A + G +D +++++ MS P+ + + + K G I E ++ M KP
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 380 YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
TF+ V+I E+ F++++ + P+ +F+ M+ + R +++A
Sbjct: 277 DIITFN-VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
++ D ++P TY +I Y G V +++ E+ S ++++ CR
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCR 395
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
G +A+K + + PD + Y+ + ++ + +V L +M
Sbjct: 396 NGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 131/293 (44%), Gaps = 19/293 (6%)
Query: 242 LQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKR 301
L R ++DRI+ ER + S L+L + +GH+ ++ A+ V T +
Sbjct: 85 LTREYYSIDRII-ERLKISGCEIKPRVFLLLLEIFWRGHIYDK-------AIEVYTGMSS 136
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
VP++ ++++ +L ++ ALE++E + F F + FC G
Sbjct: 137 F---GFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGG 189
Query: 362 IDEAMEL---MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
+ + + ++ M G G P E F ++ C +G + E V M+ +G S
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR-TGCVSEAFQVVGLMICSGISVSVN 248
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+ +V + + ++A +++ G P TY+ LIKG+ G V E + ++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+ + + P + + +I R G+ E+A K +++ R L PD + ++++S
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
D A+E+Y M GF PN+ K ++ A+E+ G+ R + H
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 388 IIGCA-AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
C+ G G L V + M+G GF P+ F +++ C V +A + ++
Sbjct: 185 ---CSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G +S+L+ G+ GE Q+ + L+ +M P L +TS+I+ G +++A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
L ++S L PD+ + MI ++ + G
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLG 331
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 166/430 (38%), Gaps = 109/430 (25%)
Query: 76 KDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPG 135
+ P D KT L+FF W AK + + H R++ + V+ E L R+
Sbjct: 48 ESPADLKT-LNFFFWCAKQNNYFHDDRAFDHMVGVV-------------EKLT---REYY 90
Query: 136 AVRAVTDSLIDAVGFVSGSHRP-VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASF 194
++ D +I+ + +P V LL++ + + + + A +V + + GF + +
Sbjct: 91 SI----DRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAM 146
Query: 195 NSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMG 254
N ++ V + + V+ +++E IR RN+ + I + C G
Sbjct: 147 NMMMDVNFKLNVVNGALEIFEG-IRFRNF---FSFDIALSHFCSRG-------------- 188
Query: 255 ERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY 314
G+ + V V +V LKR++ + P+ +
Sbjct: 189 -------------------------------GRGDLVGVKIV--LKRMIGEGFYPNRERF 215
Query: 315 SLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG 374
I+ R G + A ++ M+ SG + V++ GF + G +A++L M
Sbjct: 216 GQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM-- 273
Query: 375 RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVE 434
+ IGC+ P+ +++ +++ + V+
Sbjct: 274 ------------IQIGCS----------------------PNLVTYTSLIKGFVDLGMVD 299
Query: 435 QANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVI 494
+A L+++ +G P +L+I Y G +E K++ +E + + P F S++
Sbjct: 300 EAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 495 QCLCRCGKLE 504
LC GK +
Sbjct: 360 SSLCLSGKFD 369
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD+ Y++++H + G D AL++++EMV +P + + G CK+ R+ EA+++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 369 MRGM-EGRGLKPYGETFDHVIIG-CAAG-------------------------------- 394
M + G++P + +I C G
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 395 -SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET 453
+GR E + E M G P ++++ ++ C D E AN L +++KG P
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 454 TYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
+Y++++ + + +E L+ +M + P + V LC + E+A L M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 141/345 (40%), Gaps = 61/345 (17%)
Query: 192 ASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDR 251
++N ++H +S +++ M++ + P VT +I LCK+ R +AL
Sbjct: 153 CTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKD---SRVKEALKM 209
Query: 252 IMGERKRSSHSPSAIVNSSLILRMVEKGHL-----VEEEGKRERVAVMVVTLLKRLLQQN 306
K P+ + +SLI + + G L +++E ++ V
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV------------- 256
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
D+ YS ++ + ++ G + + EEM G +P++ Y GFC E + A
Sbjct: 257 ---DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
++ M +GLKP ++ ++I+G + EE +FE M G P LS+ + +
Sbjct: 314 RVLDEMVEKGLKPDVISY-NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
LCE E+A +LD+ +L KGY + + E
Sbjct: 373 LCEGLQFEEAAV----ILDE----------MLFKGYKPRRDRLE---------------- 402
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+Q LC GKLE K + ++ R + D ++ MI +
Sbjct: 403 -----GFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPT 441
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
+Y+I IH ++G DA L + + K P V F + H D
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT-----------FGTLIHGLCKDSR 202
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
V+ KM+ D+ ++ G R ++ + S++ L + +S + + + G+
Sbjct: 203 VKEALKMK-----HDM---LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 254
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
+A +I +L K G + + I+ E P + + LI G V
Sbjct: 255 KVDAAIYSTLISSLIKAG----RSNEVSMILEEMSEKGCKPDTVTYNVLI-----NGFCV 305
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
E + + +L ++++ L PD + Y++I+ R+ + A ++E+M G
Sbjct: 306 ENDSESAN------RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGC 359
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKP 379
P++ Y G C+ + +EA ++ M +G KP
Sbjct: 360 SPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 5/244 (2%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDS-ALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+VP + + +++ R G L S AL M++EM + S K G +++
Sbjct: 79 IVPTEIIFCNVINFFGR-GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
E + ++ G KP T++ +I GC+ SG ++ L +F+ M+ P+ ++F ++
Sbjct: 138 KERLSSIDEFG-KPDACTYNILIHGCSQ-SGCFDDALKLFDEMVKKKVKPTGVTFGTLIH 195
Query: 426 KLCENRDVEQANANLTRLLD-KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
LC++ V++A +L G P Y+ LIK GE+ KL E +
Sbjct: 196 GLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIK 255
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQL 544
++++++I L + G+ + L+ M + PD Y +I + ++ ++
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 545 CNEM 548
+EM
Sbjct: 316 LDEM 319
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 128/297 (43%), Gaps = 20/297 (6%)
Query: 157 PVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEH 216
P L+++Y + + A ++ G S SFN++L+ S V +++
Sbjct: 103 PFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE 162
Query: 217 MIRGRN--YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILR 274
+ + N P+ ++ I+I + C G ++ ++ + ++ G+ + I ++++
Sbjct: 163 IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGK----GMEVTTIAFTTILSS 218
Query: 275 MVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMY 334
+ +KG L + L ++++ D+ Y++ + + + S + E+
Sbjct: 219 LYKKGELE-----------VADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELI 266
Query: 335 EEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAG 394
EEM G +P++ Y +C+ G +DEA ++ G+EG P TF +I
Sbjct: 267 EEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCY- 325
Query: 395 SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG 451
S E+ +F+ + IP + +V L EN+ + A L R + K F P
Sbjct: 326 SRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKG-LIRTVKKKFPPS 381
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
E F +I + + FE M G S +SF+ ++ +++ ++ +
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDK----VP 157
Query: 442 RLLDK------GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
+L D+ +P + +Y +LIK Y G ++ +++ +M+ K M FT+++
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
L + G+LE A+ M + D A Y I S QK + RV +L EM+S+ L
Sbjct: 218 SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGL 274
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 2/211 (0%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
++PD + Y +++ + G+ + A+E+ +M G E + +T+ K+G ++ A
Sbjct: 170 IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
L M +G + ++ I+ S E + E M G P +S++ ++
Sbjct: 230 NLWNEMVKKGCELDNAAYNVRIMSAQKESP--ERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
CE +++A L P T+ LI ++ ++ + Y P
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+ ++ L K +DA+ ++T+K +
Sbjct: 348 FNTLKHLVVGLVENKKRDDAKGLIRTVKKKF 378
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 311 SVGYSLIVHAKVRLGSLDSALEMYEEMVM--SGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
+V ++ +++A + + D ++++E+ + P+ Y +C G ++A+E+
Sbjct: 137 AVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEI 196
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
MR M+G+G++ F I+ G LE ++ M+ G +++ +
Sbjct: 197 MRQMQGKGMEVTTIAFT-TILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-A 254
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLS 488
+ E+ + + G P +Y+ L+ Y +G + E K+Y +E + P +
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314
Query: 489 VFTSVIQCLC 498
F ++I LC
Sbjct: 315 TFRTLIFHLC 324
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 109/239 (45%), Gaps = 5/239 (2%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D + ++ ++ A + G + A+E+ +EM G P + GG+ + G+ D AM+LM
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
+ ME G+ T+ +I G R + L +F M AG +P+ ++ V
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRY-QALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ + Q + + + GF+ + L+ Y+ G++++ K++ ++ K +
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYT 420
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ S+I C+ G A + M+ L P++ + TMI+ + + G+ + L M
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 24/273 (8%)
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ GK E V L+K + ++ + P V +++++ +LG D+A+++ ++M G
Sbjct: 259 QNGKHEEA----VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGIT 314
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
+ F +T+ G G +A+++ R M G+ P T + C+ CL
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS--------CLK 366
Query: 404 VFEA-------MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYS 456
V + GFI L + +V+ + +E A + +K T++
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY----TWN 422
Query: 457 LLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM-KS 515
+I GY G + +L+ M+ ++ P + + ++I + G +A + M K
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 516 RLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ + A + +IA + Q G L+L +M
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 316 LIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR 375
L V+AK G LD A + + M E + + S +C+ G+ +EA+EL++ ME
Sbjct: 223 LAVYAKC--GELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G+ P T++ ++IG G+ + + + + M G ++ M+ L N Q
Sbjct: 277 GISPGLVTWN-ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A ++ G +P T + + + + +++ + V S++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
+CGKLEDA K ++K++ DV + +MI + Q G + +L M L
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 175/452 (38%), Gaps = 73/452 (16%)
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
++L+ Y ++ +AA D+ +E G + ++ +++ L + D++ M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 220 GRNYPNAVTLKIMIDAL-CKEGLLQ-RNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
PNAVT+ + A C + + Q V ++ MG +V +SL+ +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG------FIDDVLVGNSLVDMYSK 399
Query: 278 KGHL-----VEEEGKRERVAVM---------------VVTLLKRLLQQNLVPDSVGYSLI 317
G L V + K + V L R+ NL P+ + ++ +
Sbjct: 400 CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 318 VHAKVRLGSLDSALEMYEEMVMSG-FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+ ++ G A+++++ M G + N+ + G+ + G+ DEA+EL R M+
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 377 LKPYGETFDHVIIGCA----------------------------------AGSGRLEECL 402
P T ++ CA A SG +E
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSR 579
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+F M I +++ ++ + A A ++ +G P T S +I +
Sbjct: 580 TIFLGMETKDII----TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 463 AAKGEVQEVLKLYYEM--EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G V E K++Y + +Y + P L ++++ R +LE+A ++++ M + TP
Sbjct: 636 GLMGNVDEGKKVFYSIANDYH-IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
I+E+ + G+ + + SLE
Sbjct: 695 ---IWESFLTGCRIHGDIDMAIHAAENLFSLE 723
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 329 SALEMYEEMVMSGFEPNSFVYTSFTGGF-------CKEGRIDEAMELMRGMEGRGLKPYG 381
+ALE+YE+++ G EPN+ Y F K G + L+ ME +GLKP
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 382 ETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
++ V++ C+ S + +F+AM+ G P+ +S+ ++ L + + ++A
Sbjct: 459 RHWNAVLVACSKAS-ETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWN 517
Query: 442 RLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCG 501
++ G P Y+ + + + + L EM K + P + F +VI R G
Sbjct: 518 HMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG 577
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
A ++ MKS + P+ YE +I E N+A+
Sbjct: 578 LSGVAYEWFHRMKSENVEPNEITYEMLI---EALANDAK 613
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 108/260 (41%), Gaps = 31/260 (11%)
Query: 182 VEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVT-------LKIMID 234
+ R +SL+ N ++ ++ ++ + ++YE ++ PN ++ I++
Sbjct: 372 IRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLS 431
Query: 235 ALCKEGLLQRNVDALDRI--MGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
A K G+ + V L+++ G + + H + +V S +
Sbjct: 432 AASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACS-----------------KASET 474
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
+ + K ++ P + Y ++ A + D A ++ M+ G EPN + YT+
Sbjct: 475 TAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTM 534
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAG--SGRLEECLGVFEAMLG 410
+ + + L++ M +G++P TF+ VI GCA SG E F M
Sbjct: 535 ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEW---FHRMKS 591
Query: 411 AGFIPSCLSFDKMVEKLCEN 430
P+ ++++ ++E L +
Sbjct: 592 ENVEPNEITYEMLIEALAND 611
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 14/227 (6%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
V LL ++ + L P ++ ++ A + +A+++++ MV +G +P Y +
Sbjct: 443 VRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSA 502
Query: 356 FCKEGRIDEAMELMRGMEGRGLKP--YGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
K DEA + M G++P Y T + G + + + M G
Sbjct: 503 LEKGKLYDEAFRVWNHMIKVGIEPNLYAYT---TMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
PS ++F+ ++ N A R+ + P E TY +LI+ A + +
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKP----R 615
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
L YE+ K+ GL + + + + AE Y T+ LL P
Sbjct: 616 LAYELHVKAQNEGLKLSSKPYDAVVK-----SAETYGATIDLNLLGP 657
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 115/565 (20%), Positives = 226/565 (40%), Gaps = 67/565 (11%)
Query: 41 ICDSFRRRRSWDA-VSRKFGSLELNDSLVEQVLLELKDP---NDAKTALSFFHWSAKTHR 96
+ S R R W + + L S+ ++ + DP N AL FF+W+A+
Sbjct: 18 VSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPG 77
Query: 97 FNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN--RDPGAVRAVTDSLIDA------- 147
++H SY L + + AL + + + D R++ D+L+
Sbjct: 78 YSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAF 137
Query: 148 ----VGFVSGS--HRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVL 201
F +G H V + L+ + A + + +G ++ F +
Sbjct: 138 WVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWF 197
Query: 202 QRSDRVSLVWDVYEHMIRGR-NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSS 260
RS + + + + + + N ++ +++ +LCK R +DA I+ E +
Sbjct: 198 CRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCK---CSREMDAF-YILEELRNID 253
Query: 261 HSPSAIVNSSLILRMVEKGHLVEEE----GKRE----------RVAVMVVTLLKRLLQQN 306
P + + V G+L E + KR+ R ++ + KRL +
Sbjct: 254 CKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAK 313
Query: 307 LVPDSVGYSLIVHAKVRL---------GSL-----DSALEMYEEMVMSGFEPNSFVYTSF 352
V + +IV K + GS+ DSA+E MV +G P +
Sbjct: 314 EVAE-----VIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKL 368
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
+ C+ + D ++ + +G +++ ++I +GR+ E + M G
Sbjct: 369 SKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS-LMISFLCKAGRVRESYTALQEMKKEG 427
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG----ETTYSLLIKGYAAKGEV 468
P ++ ++E C+ + A +L D+ F+ G TTY++LI+ + +GE
Sbjct: 428 LAPDVSLYNALIEACCKAEMIRPAK----KLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 469 QEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRLLTPDVAIYET 527
+E L+L+ +M + + P +++ S+I+ LC+ K+E A E + K M+ T +
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE 543
Query: 528 MIASHEQKGNNARVLQLCNEMASLE 552
+ + G++ QL E LE
Sbjct: 544 FVLNLCSNGHSGEASQLLREREHLE 568
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 162/367 (44%), Gaps = 18/367 (4%)
Query: 183 EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLL 242
E + S+ ++N VL + R+ + + +++ M + P+ T +I + KEG+
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 243 QRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL 302
+ L ++ +R S ++ S+LI E +R +++ RL
Sbjct: 207 DSALSWLQKMEQDRV----SGDLVLYSNLI-----------ELSRRLCDYSKAISIFSRL 251
Query: 303 LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRI 362
+ + PD V Y+ +++ + A + +EM +G PN+ Y++ + + +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 363 DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK 422
EA+ + M+ T +++I ++E +F ++ P+ +S++
Sbjct: 312 LEALSVFAEMKEVNC-ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 423 MVEKLCENRDVEQANANLTRLLD-KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
++ E +A +L RL+ K TY+ +IK Y E ++ L EM+ +
Sbjct: 371 ILRVYGEAELFGEA-IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARV 541
+ P ++++I + GKL+ A + ++S + D +Y+TMI ++E+ G
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 542 LQLCNEM 548
+L +E+
Sbjct: 490 KRLLHEL 496
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 179/441 (40%), Gaps = 50/441 (11%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVT--------DSLIDAVGFVSGS 154
+Y+ I+V +A L +AR L++ + P V T ++A+ V
Sbjct: 262 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS-VFAE 320
Query: 155 HRPV---LDL-----LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDR 206
+ V LDL ++ Y ++ + + A + ++ ++ S+N++L V ++
Sbjct: 321 MKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAEL 380
Query: 207 VSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAI 266
++ M R N VT MI K ++ + ++ E + P+AI
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN----LVQEMQSRGIEPNAI 436
Query: 267 VNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGS 326
S++I + + GK +R A TL ++L + D V Y ++ A R+G
Sbjct: 437 TYSTII-------SIWGKAGKLDRAA----TLFQKLRSSGVEIDQVLYQTMIVAYERVGL 485
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMR-GMEGRGLKPYGETFD 385
+ A + E+ + P++ + K GR +EA + R E GE D
Sbjct: 486 MGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQAFES------GEVKD 535
Query: 386 HVIIGCA----AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLT 441
+ GC + + R + VFE M AG+ P ++ + R+ E+A+
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 595
Query: 442 RLLDKG-FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+ ++G P E + +L Y++K + + V L+ +E + V R
Sbjct: 596 EMQEEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERA 654
Query: 501 GKLEDAEKYLKTMKSR-LLTP 520
KL DA + + M+ R +L P
Sbjct: 655 DKLNDASRVMNRMRERGILKP 675
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 103/555 (18%), Positives = 207/555 (37%), Gaps = 116/555 (20%)
Query: 15 SFHKLHSHTAFPRNS--NHNA-VDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQV 71
SF L H + R++ +HN +D++ A+I + + + +S + +L+ + +
Sbjct: 70 SFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLS-TYKDRQLSIRFMVSL 128
Query: 72 LLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
L ND + +L+ W + ++ V +Y++ + ++RA A L + + +
Sbjct: 129 L---SRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA 185
Query: 132 RDPGAVRAVTDSLIDAVG----FVSG--------SHRPVLDL-----LVQTYAKMRLTEA 174
P R +LI + G F S R DL L++ ++
Sbjct: 186 LAPD--RYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK 243
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV------- 227
A + ++ G L ++NS+++V ++ + + M PN V
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 228 ----------------------------TLKIMIDALCKEGLLQRNVDALDRIMGERKRS 259
T IMID + + V DR+ ++
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM----VKEADRLFWSLRKM 359
Query: 260 SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRL-LQQNLVPDSVGYSLIV 318
P+ +V+ + ILR+ + L E A+ + L++R ++QN+ V Y+ ++
Sbjct: 360 DIEPN-VVSYNTILRVYGEAELFGE-------AIHLFRLMQRKDIEQNV----VTYNTMI 407
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
+ + A + +EM G EPN+ Y++ + K G++D A L + + G++
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 379 PYGETFDHVI------------------------------IGCAAGSGRLEECLGVFEAM 408
+ +I I A +GR EE VF
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 409 LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK----GFLPGETTYSLLIKGYAA 464
+G + F M+ N Q N+ + +K G+ P ++++ Y
Sbjct: 528 FESGEVKDISVFGCMINLYSRN----QRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
Query: 465 KGEVQEVLKLYYEME 479
+ E ++ +Y EM+
Sbjct: 584 QREFEKADTVYREMQ 598
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTG 354
V +LK++ Q + PD + + +VH + G+ + A E +E + G P+ +Y +
Sbjct: 403 VERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 355 GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFI 414
G+ G+ LM+ M+ + LK E + ++ A G G+ +M A
Sbjct: 463 GYVNAGKPKLGERLMKEMQAKELKASEEVY-MALLRAYAQMGDANGAAGISSSMQYASDG 521
Query: 415 P-SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
P S ++ VE + V++A +N + G P + + L++ Y + + + L+
Sbjct: 522 PLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALR 581
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
L ++E + G+ +T ++ + G +E+AE+ L
Sbjct: 582 LLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 151/367 (41%), Gaps = 23/367 (6%)
Query: 165 TYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP 224
T+A +++ E D + F S++ ++ ++H+ + + + V + + M + +P
Sbjct: 364 THAYLKVAEGVLD------EKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFP 417
Query: 225 NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEE 284
+ +T ++ K G +R +A + + K P + ++IL V G +
Sbjct: 418 DILTATALVHMYSKSGNFERATEAFENL----KSYGLRPDEKIYEAMILGYVNAGK--PK 471
Query: 285 EGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
G+R L+K + + L Y ++ A ++G + A + M + P
Sbjct: 472 LGER---------LMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGP 522
Query: 345 NSF-VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
SF Y+ F + K G++D+A M G KP + + ++ G L++ L
Sbjct: 523 LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIAN-LVRAYKGENSLDKALR 581
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ + G +++ +V+ + +E+A L ++ G P L Y+
Sbjct: 582 LLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYS 641
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
++ L+ +E K G + F VI L R G +DA + K M++R P
Sbjct: 642 GVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARRMYKYMEARKFLPSQR 701
Query: 524 IYETMIA 530
+ M+A
Sbjct: 702 LQMDMVA 708
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
L +K F + YS LI +A + +++V ++ +M + P + T+++ + G
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGN 434
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL 553
E A + + +KS L PD IYE MI + G +L EM + EL
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKEL 485
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 301 RLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE--PNSFVYTSFTGGFCK 358
R+ + + PD Y+ I++A R+G+ A + ++M + GF P+++ YT +C+
Sbjct: 190 RMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCR 249
Query: 359 EG-----------RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEA 407
G R+ EA + R M RG P T++ +I GC + R+ L +FE
Sbjct: 250 YGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK-TNRIGRALELFED 308
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF-LPGETTYSLLIKGYAAKG 466
M G +P+ ++++ + ++E A + + G +PG +TY+ LI
Sbjct: 309 MKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETR 368
Query: 467 EVQEVLKLYYEM----------EYKSMCPGLS 488
E L EM YK +C LS
Sbjct: 369 RAAEARDLVVEMVEAGLVPREYTYKLVCDALS 400
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 104/278 (37%), Gaps = 37/278 (13%)
Query: 189 VSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDA 248
V+ AS ++ L V + M P+ +I+ALC+ G ++
Sbjct: 163 VTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 249 LDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLV 308
LD++ R + P + LI G R + + +L + V
Sbjct: 223 LDQMQLPGFR--YPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD V Y+ ++ + + ALE++E+M G PN Y SF + I+ A+E+
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
MR M+ LG G +P ++ ++ L
Sbjct: 341 MRTMKK----------------------------------LGHG-VPGSSTYTPLIHALV 365
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKG 466
E R +A + +++ G +P E TY L+ +++G
Sbjct: 366 ETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 23/190 (12%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF 384
G + AL + M +P+ + Y + C+ G +A L+ M+ G + +T+
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 385 DHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ I+ + G C + R + +AN +L
Sbjct: 239 TYTIL---------------ISSYCRYGMQTGC--------RKAIRRRMWEANRMFREML 275
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
+GF+P TY+ LI G + L+L+ +M+ K P + S I+ ++E
Sbjct: 276 FRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIE 335
Query: 505 DAEKYLKTMK 514
A + ++TMK
Sbjct: 336 GAIEMMRTMK 345
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 330 ALEMYEEMV-MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVI 388
A +Y EM M G EP+ Y FC+ G + ++ ME +G+KP +F +I
Sbjct: 170 AKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMI 229
Query: 389 IGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
G A + +E V M G +++ ++ LC+ + ++A A L +L G
Sbjct: 230 SGFYA-EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 449 LPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEK 508
P TYS LI G+ + + +E KL+ M + P + ++I LC+ G E A
Sbjct: 289 KPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALS 348
Query: 509 YLKTMKSRLLTPDVAIYETMI 529
K + P +I ++++
Sbjct: 349 LCKESMEKNWVPSFSIMKSLV 369
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 80/174 (45%)
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
+ + +D ++ + R +E + ++ + ++ C E E G P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
++++M++ CE+ + + + + KG P +++ L+I G+ A+ + EV K+
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
M+ + + G+S + IQ LC+ K ++A+ L M S + P+ Y +I
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y++ + + + A + + M+ +G +PN+ Y+ GFC E +EA +L + M
Sbjct: 260 YNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMV 319
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
RG KP E + +I G G E L + + + ++PS +V L ++ V
Sbjct: 320 NRGCKPDSECYFTLIYYLCKG-GDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKV 378
Query: 434 EQANANLTRLLDK 446
E+A + ++ +K
Sbjct: 379 EEAKELIGQVKEK 391
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
+ PD V Y+ ++ A R GS+D L ++EE+ +GFEP+ + + F + E
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
+ M+ + L P +++ + G + + L + + M G P +++ ++
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNK-KFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
+ ++E+ + +KG P TY +LI KG++ +++ E +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
+++ V++ L GK+++A + +K K
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 325 GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGM-EGRGLKPYGET 383
G + A ++++EM E + + + ++DEAM+ + + E G+ P T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 384 FDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
++ +I C GS +++ L +FE + GF P +SF+ ++E+ + +
Sbjct: 196 YNTMIKALCRKGS--MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGK 502
+ K P +Y+ ++G + + L L M+ + + P + + ++I
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 503 LEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNE 547
LE+ K MK + LTPD Y +I +KG+ R +++ E
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGA-GFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ ++ S +L+E + F+ + G P ++++ M++ LC ++ + L
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 445 DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
GF P +++ L++ + + E +++ M+ K++ P + + S ++ L R K
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
Query: 505 DAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
DA + MK+ ++PDV Y +I ++ N V++ NEM
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
L+++ + V D + Y ++ + V+LG L+ A E+Y+EMV EP+ VY F
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGA---GFIP 415
G + +AM + M+ G+ P + +I G L+E ++ +L + P
Sbjct: 623 TGNVQQAMSYVEAMKEAGI-PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
+ + M+ E V +A A + +G E T+++++ Y G +E ++
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIA 740
Query: 476 YEM-EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETM 528
+M E K + LS + SV+ G+ ++A + K M S + PD + ++++
Sbjct: 741 KQMREMKILTDPLS-YNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/535 (18%), Positives = 205/535 (38%), Gaps = 80/535 (14%)
Query: 75 LKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDP 134
LK+ + A+ F W + V Y+I + +L +A ++L + + K P
Sbjct: 161 LKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKP 220
Query: 135 GAVRAVTDSLIDA-------------VGFVSG-SHRP---VLDLLVQTYAKMRLTEAAFD 177
+ + +LID +G +S +P +++Q Y K R + A +
Sbjct: 221 --INSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 178 V----CCNVEARGFRVSLAS--FNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKI 231
C+ V L+S +N+++ +S ++ + ++ M+ P VT
Sbjct: 279 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 232 MIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERV 291
MI G L V +L + M H ++++ + K + +E G
Sbjct: 339 MIHIYGNNGQLGE-VTSLMKTM-----KLHCAPDTRTYNILISLHTKNNDIERAG----- 387
Query: 292 AVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTS 351
K + L PD V Y +++A ++ A + EM E + + ++
Sbjct: 388 -----AYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 352 FTGGFCKEGRIDEAMELMR------GMEGRG----LKPYGE-----TFDHVIIGCAAGSG 396
T + + ++++ + M G + YGE + V I C +
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNK 502
Query: 397 RL-----------------EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANAN 439
R E+ +FE+M+ G P +++ +V+ L +
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 440 LTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCR 499
L ++ + G++ Y +I + G++ ++Y EM ++ P + V+ +I
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 500 CGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG--NNA-----RVLQLCNE 547
G ++ A Y++ MK + + IY ++I + + G + A ++LQ CN+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNK 677
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/361 (18%), Positives = 151/361 (41%), Gaps = 22/361 (6%)
Query: 173 EAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIM 232
E F C V R ++ +N ++ S +++E M+ P+ T +
Sbjct: 491 ERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546
Query: 233 IDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVA 292
+ L + + L+++ + + + I ++I V+ G L
Sbjct: 547 VQILASADMPHKGRCYLEKM----RETGYVSDCIPYCAVISSFVKLGQLN---------- 592
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
M + K +++ N+ PD V Y ++++A G++ A+ E M +G NS +Y S
Sbjct: 593 -MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 353 TGGFCKEGRIDEAMELMRG-MEGRGLKPYGETF-DHVIIGCAAGSGRLEECLGVFEAMLG 410
+ K G +DEA + R ++ Y + + + +I + + + +F++M
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 411 AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQE 470
G +F M+ +N E+A ++ + L +Y+ ++ +A G +E
Sbjct: 712 RGEANE-FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 471 VLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIA 530
++ + EM + P S F S+ L + G + A + ++ ++ + + + ++ + ++
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLS 830
Query: 531 S 531
S
Sbjct: 831 S 831
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
++++ L D S ++ +LG + AL +++EMV ++ V+ S GGF + R
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSR 240
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
D A+EL + M+ G T V+ C G LE LG+ + + + +
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACT-GLALLE--LGMQAHVHIVKYDQDLILNN 297
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+V+ C+ +E A ++ ++ + T+S +I G A G QE LKL+ M+
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVI----TWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNAR 540
P V+ G LED Y ++MK + P Y MI + G
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 541 VLQLCNEM 548
++L NEM
Sbjct: 414 AVKLLNEM 421
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 138/333 (41%), Gaps = 34/333 (10%)
Query: 236 LCKEGLLQRNVDALDRIMGERKRS-SHSPSAIVNSSLILRMVEKGHLVEEE----GKRER 290
LC + L R + A+D + + S + S ++ + R V +G+L+ G R
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP- 94
Query: 291 VAVMVVTLLKRLLQQNLVPDS------------VGYSLIVHAKVRLGSLDSALEMYEEMV 338
+ +V L+ ++ NL+ D+ + ++ ++ A + ALE+ M+
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETF-DHVIIGCAAGSGR 397
PN + Y+S C G D M L G+ GL+ + F +I A G
Sbjct: 155 RDNVRPNVYTYSSVLRS-CN-GMSDVRM-LHCGIIKEGLE--SDVFVRSALIDVFAKLGE 209
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
E+ L VF+ M+ I ++ ++ +N + A R+ GF+ + T +
Sbjct: 210 PEDALSVFDEMVTGDAI----VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+++ A G L + + L + +++ C+CG LEDA + MK R
Sbjct: 266 VLR--ACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER- 322
Query: 518 LTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
DV + TMI+ Q G + L+L M S
Sbjct: 323 ---DVITWSTMISGLAQNGYSQEALKLFERMKS 352
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 110/238 (46%), Gaps = 3/238 (1%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG--FEPNSFVYTSFTGGFCKE 359
L +N+ PD V ++ ++ A + G++D A ++ EM +P+ + C
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
G+++ A E+ + + G++ E + + C+ SG + +++ M P +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSK-SGDWDFACSIYKDMKEKDVTPDEVF 681
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
F +++ + +++A L +G G +YS L+ + ++ L+LY +++
Sbjct: 682 FSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIK 741
Query: 480 YKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+ P +S ++I LC +L A +YL +K+ L P+ Y ++ + E+K +
Sbjct: 742 SIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 123 LLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNV 182
+L S+ A ++D R V L+ G + + L+ + AK +A F+V +
Sbjct: 472 MLMSVCASSQDIEGARGVL-RLVQESGMTADCK--LYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 183 EARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY-PNAVTLKIMIDALCKEGL 241
G +L +F +++ R+ +V+ + Y ++R +N P+ V +I A + G
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAY-GILRSKNVKPDRVVFNALISACGQSGA 587
Query: 242 LQRNVDALDRIMGERKRSSHS--PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLL 299
+ R D ++ E K +H P I +L+ G + ER + +
Sbjct: 588 VDRAFD----VLAEMKAETHPIDPDHISIGALMKACCNAGQV-------ERAKEVYQMIH 636
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
K ++ P+ Y++ V++ + G D A +Y++M P+ +++
Sbjct: 637 KYGIRG--TPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLS 419
+DEA +++ + +G++ G ++G + ++ L ++E + P+ +
Sbjct: 693 KMLDEAFGILQDAKSQGIR-LGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIST 751
Query: 420 FDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME 479
+ ++ LCE + +A L + G P TYS+L+ K + + KL + +
Sbjct: 752 MNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAK 811
Query: 480 YKSMCPGLSVFTSVIQCLCRC 500
+ P L +CRC
Sbjct: 812 GDGVSPNL--------IMCRC 824
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
++GRI + + L+ ++ R L + + ++E + +L P+
Sbjct: 412 RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN----PTM 467
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+F+ ++ ++D+E A L + + G Y+ LI A G+V + +++++
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
M + L F ++I R G++ A ++S+ + PD ++ +I++ Q G
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 538 NARVLQLCNEM 548
R + EM
Sbjct: 588 VDRAFDVLAEM 598
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 153/359 (42%), Gaps = 32/359 (8%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
L+ YA L++ A V ++ G + S +S +S+L + + L ++ +++R +
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ + +ID K G L D + + + +S + ++ + +L+ E
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE---- 311
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
L+ R+ ++ + PD++ ++ + LG + AL++ +M G
Sbjct: 312 ---------------ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV--IIGCAA--GSGR 397
PN +T+ G K G A+++ M+ G+ P T + I+GC + SG+
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 398 LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
+ + ++ ++ + L V+ ++ D++ A + +K +++
Sbjct: 417 EVHGFCLRKNLICDAYVATAL-----VDMYGKSGDLQSAIEIFWGIKNKSL----ASWNC 467
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
++ GYA G +E + + M M P FTSV+ G +++ KY M+SR
Sbjct: 468 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
++ I+ + +LG +D A+ + +EM + G +P+ + S G+ +G +A+ +++ M+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 374 GRGLKPYGETFD----------HVIIGCAAGSGRLEECLG--------VFEAMLGAGFIP 415
GLKP + H+ +G A L L + + + G++P
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 416 ------------SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+ ++++ +V L ++ A A + R+ +G P T++ L GYA
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVA 523
G+ ++ L + +M+ K + P + +T++ + G +A K M+ + P+ A
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 524 IYETMI 529
T++
Sbjct: 398 TMSTLL 403
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
S + LE+ ++ S + N + S + K G +D+A+ L+ ME GLKP T++
Sbjct: 135 SRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD 445
++ G A+ G ++ + V + M AG PS S +++ + E ++ A +L
Sbjct: 195 SLLSGYAS-KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR 253
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+ LI Y G + ++ M+ K++ + S++ L L+D
Sbjct: 254 NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV----AWNSLVSGLSYACLLKD 309
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
AE + M+ + PD + ++ + + G + L + +M
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 296 VTLLKRLLQQ-NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG-FEPNSFVYTSFT 353
++L + +Q N+VP+ V Y+ I++A G++D ALE+Y ++ + F P+S Y T
Sbjct: 200 ISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLT 259
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
G + GRI +A L+R M +G ++++I G G ++ + F+ +
Sbjct: 260 KGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY-LDLGDFDKAVEFFDELKS--- 315
Query: 414 IPSCLSFDKMV-----EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEV 468
C +D +V E E + ++A + LLDK F T ++L++ + G+
Sbjct: 316 --KCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKK 373
Query: 469 QEVLKLYYEMEYKSMCPG-LSVFTSVIQCLC-RCGKLEDAEKYLKTMK 514
E L+ EM P LSV + + + C K+ + + + T K
Sbjct: 374 DEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFK 421
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/449 (19%), Positives = 171/449 (38%), Gaps = 66/449 (14%)
Query: 126 SLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEAR 185
S RDP A R + DS VG R L VQ+ + +AA +
Sbjct: 121 SAPPPKRDPNAPR-LPDSTSALVG-----QRLNLHNRVQSLIRASDLDAASKLARQSVFS 174
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN-YPNAVTLKIMIDALCKEGLLQR 244
R ++ + N+++ + R+ R S ++++ + N PN V+ +I+A C EG +
Sbjct: 175 NTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDE 234
Query: 245 NVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQ 304
++ I+ + +PS++ L +V+ G + + +LL+ +L
Sbjct: 235 ALEVYRHILA---NAPFAPSSVTYRHLTKGLVQAGRIGD-----------AASLLREMLS 280
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ DS Y+ ++ + LG D A+E ++E+ + V +F + ++G E
Sbjct: 281 KGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKE 340
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD--- 421
AME R + + + + T +V++ G+ +E +F ML P+ LS +
Sbjct: 341 AMESYRSLLDKKFRMHPPT-GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDT 399
Query: 422 -----------------------------------------KMVEKLCENRDVEQANANL 440
+V + CE + +A
Sbjct: 400 VGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFF 459
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+ + ++ +I Y + + +K+ M ++ V L +
Sbjct: 460 AEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKN 519
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
GKL ++ + L M R PD +IY+ ++
Sbjct: 520 GKLTESAEVLTKMGEREPKPDPSIYDVVV 548
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLG-AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL 444
+ II + R E + +F+ + +P+ +S+++++ C+ +V++A +L
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL 243
Query: 445 -DKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL 503
+ F P TY L KG G + + L EM K +V+ ++I+ G
Sbjct: 244 ANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDF 303
Query: 504 EDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
+ A ++ +KS+ D + T + +KGN+ ++
Sbjct: 304 DKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAME 343
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 175/445 (39%), Gaps = 67/445 (15%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
SY+ I VRAG +A L K RD A + + A + +
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKW---------NEA 196
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
V+ + M + E + S +S++H + R+ +++ M
Sbjct: 197 VRVFQGMAVKE-----------------VVSCSSMVHGYCKMGRIVDARSLFDRMTE--- 236
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
N +T MID K G + R+ E VNS+ + M +
Sbjct: 237 -RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE-------GDVKVNSNTLAVMFKACR-- 286
Query: 283 EEEGKRERVAVMVVTLLKRL-LQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ R R + L+ R+ L+ +L +G SL+ +LG + A ++ M
Sbjct: 287 --DFVRYREGSQIHGLVSRMPLEFDLF---LGNSLMSMYS-KLGYMGEAKAVFGVMK--- 337
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
+S + S G + +I EA EL M G+ + + + +I +G G + +C
Sbjct: 338 -NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD-----MIKGFSGKGEISKC 391
Query: 402 LGVFEAMLGAGFIP--SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ +F G +P +++ M+ N E+A ++L K P T+S ++
Sbjct: 392 VELF------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
A+ ++ E L+++ + ++ LSV S++ C+CG DA K +
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE---- 501
Query: 520 PDVAIYETMIASHEQKGNNARVLQL 544
P++ Y TMI+ + G + L+L
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKL 526
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
K ++ PD V Y +++A + G L A+E+Y M + P+ + + C
Sbjct: 269 FWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALC 328
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM--LGAGFIP 415
+ RI EA+E+ R + +G P T++ ++ R E+ + E M G P
Sbjct: 329 FKKRIPEALEVFREISEKGPDPNVVTYNS-LLKHLCKIRRTEKVWELVEEMELKGGSCSP 387
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
+ ++F +++ ++DV+ L R+ Y+L+ + Y + ++V +++
Sbjct: 388 NDVTFSYLLKYSQRSKDVDIV---LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPD 521
EME + P +T I L GK+ +A Y + M S+ + P+
Sbjct: 445 SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 8/244 (3%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D ++I++ LG++ A +++++ S P+ Y + K+G++ +AMEL
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
R M P + ++V I R+ E L VF + G P+ ++++ +++ LC+
Sbjct: 306 RAMWDTRRNPDVKICNNV-IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 430 NRDVEQANANLTRLLDKG--FLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
R E+ + + KG P + T+S L+K +V VL E K+ C
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVL----ERMAKNKCEMT 420
Query: 488 S-VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCN 546
S ++ + + + K E + M+ L PD Y I KG L
Sbjct: 421 SDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 547 EMAS 550
EM S
Sbjct: 481 EMMS 484
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 188 RVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVD 247
R + S+ ++++ L + ++ ++Y M R P+ +IDALC +R +
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALC---FKKRIPE 335
Query: 248 ALDRIMGERKRSSHSPSAIVNSSLI-----LRMVEK-GHLVEE---EG------------ 286
AL+ + E P+ + +SL+ +R EK LVEE +G
Sbjct: 336 ALE-VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 287 --KRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEP 344
K + + V +L+R+ + S Y+L+ V+ + E++ EM SG P
Sbjct: 395 LLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 345 NSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
+ YT G +G+I EA+ + M +G+ P T
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 18/244 (7%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
+SV ++ ++ +R G +D+A +M+++M E + +T+ GF K+G +EA+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGS----GRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
R M+ G+KP D+V I A + G L L V +L F + + +++
Sbjct: 195 REMQISGVKP-----DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLID 249
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
C VE A + + + +++ +I G+AA G E L + +M+ K P
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVV----SWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQL 544
FT + G +E+ +Y + MK ++P + Y ++ + + G L+L
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Query: 545 CNEM 548
M
Sbjct: 366 VQSM 369
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 185/457 (40%), Gaps = 92/457 (20%)
Query: 89 HWSAKTHRFNHGVR----SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSL 144
H + K R N S++ I++L R G + +A + +P + + +L
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFI--AL 77
Query: 145 IDAVG-FVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQR 203
+ G F SGS L L+ YA C + V + + +++ + +
Sbjct: 78 LSGCGDFTSGSE--ALGDLLHGYA------------CKLGLDRNHVMVGT--AIIGMYSK 121
Query: 204 SDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSP 263
R V+++M N+VT MID + G + D++ +R S
Sbjct: 122 RGRFKKARLVFDYM----EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM---PERDLISW 174
Query: 264 SAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
+A++N V+KG+ +EE + + + + PD V ++A
Sbjct: 175 TAMING-----FVKKGY--QEEA---------LLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
LG+L L ++ ++ F+ N V S +C+ G ++ A ++ ME R + +
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV----S 274
Query: 384 FDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRL 443
++ VI+G AA +G E L + F KM EK
Sbjct: 275 WNSVIVGFAA-NGNAHESL---------------VYFRKMQEK----------------- 301
Query: 444 LDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM--EYKSMCPGLSVFTSVIQCLCRCG 501
GF P T++ + + G V+E L+ + M +Y+ + P + + ++ R G
Sbjct: 302 ---GFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR-ISPRIEHYGCLVDLYSRAG 357
Query: 502 KLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+LEDA LK ++S + P+ + +++A+ GNN
Sbjct: 358 RLEDA---LKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D+ ++ ++ R G ++ A E++ M+ E N + + G+ + G +++A
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
+ RG+ + +I + ++E +F+ M + ++++ M+ E
Sbjct: 210 KVAPVRGVVAWT-----AMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVE 261
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
N E +L++G P + S + G + +Q +++ + ++C ++
Sbjct: 262 NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
TS+I C+CG+L DA K + MK + DV + MI+ + Q GN + L L EM
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREM 376
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 396 GRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTY 455
GR E L +F + +P ++ +VE ++ R+L G P TY
Sbjct: 211 GRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTY 270
Query: 456 SLLIKGYAAKGEVQEVLKLY-YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMK 514
S+LIKG AA G+ + K Y EM M P + +T+V + R GK E A + L+ MK
Sbjct: 271 SVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMK 330
Query: 515 SRLLTPD 521
+ PD
Sbjct: 331 GKGFVPD 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYA 463
+F M GF + KM + L ++ +A +++ DK +P ++ +++ YA
Sbjct: 187 IFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 464 AKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKL-EDAEKYLKTMKSRLLTPDV 522
G+ +E LK++ M + P ++ +I+ L GK +DA+KYL M ++P+
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNA 303
Query: 523 AIYETMIASHEQKGNNARVLQLCNEM 548
A Y + + ++G +L EM
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEM 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L ++ +N +PD V ++ IV A G L+++ M+ SG PN++ Y+ G
Sbjct: 219 LFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLA 278
Query: 358 KEGRI-DEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
+G+ +A + + M G G+ P T+ + G+ E + + M G GF+P
Sbjct: 279 ADGKTHKDAKKYLLEMMGNGMSPNAATY-TAVFEAFVREGKEESARELLQEMKGKGFVP 336
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 124/301 (41%), Gaps = 25/301 (8%)
Query: 110 VLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKM 169
++VR +I ++ E + +P ++ A++ +G + + ++L+ +
Sbjct: 863 LMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRA 922
Query: 170 RLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTL 229
+ V ++ RG +FN ++H S S MI PN +L
Sbjct: 923 KNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSL 982
Query: 230 KIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRE 289
+ + +LC G +++ ALD + + S++V + ++ ++ KG + + E
Sbjct: 983 RAVTSSLCDNGDVKK---ALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLT 1039
Query: 290 RVAV----------------------MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
RV + V LL +L+ +P S Y +++ +R L
Sbjct: 1040 RVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQL 1099
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
D A++ + EMV G P+ ++ FC+ ++ E+ L++ M G G P E F V
Sbjct: 1100 DKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTV 1159
Query: 388 I 388
I
Sbjct: 1160 I 1160
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ ++PD ++ +VH S+L M+ G +PN+ + T C G + +
Sbjct: 938 RGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKK 997
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMV 424
A++L + ME +G LG+ + + K+V
Sbjct: 998 ALDLWQVMESKGWN------------------------------LGSSVVQT-----KIV 1022
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
E L ++ +A LTR+ G + Y +IK + +G + + L M
Sbjct: 1023 ETLISKGEIPKAEDFLTRVTRNGMMA--PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSI 1080
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
PG S + SVI L R +L+ A + M L+P ++ + ++
Sbjct: 1081 PGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLV 1125
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 173/418 (41%), Gaps = 36/418 (8%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
L+ LVQ Y K + + + + + ++ S++ + + ++ + +V+
Sbjct: 601 TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA 660
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAI----------- 266
P+ + + L ++GL++ V +R+ S I
Sbjct: 661 QNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFS 720
Query: 267 -VNSSLILRMVEKGHLVEEEGKR--------ERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
+ S++ R+ +G +VE+E E+ +L +L + +P S+G L+
Sbjct: 721 CIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIP-SLGSCLM 779
Query: 318 VHAKV-RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
+ ++ R +A + E++ +S+V+ + G G++ +A +R M G
Sbjct: 780 LIPRLCRANKAGTAFNLAEQI------DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNG 833
Query: 377 LKPYGETFDHVIIGCAAGSG--RLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC-ENRDV 433
L Y + ++ + G G+ ++EE LG+ M+ I S S+ + V K+C E + +
Sbjct: 834 LSSYNKIYNVMFQGYCKGNNWMKVEEVLGL---MVRKNIICSVKSYREYVRKMCLEPQSL 890
Query: 434 EQANANLTRLLDKGFLPGETTYSLLI-KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+ LL + G Y++LI + AK + EV K+ EM+ + + P + F
Sbjct: 891 SAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHL-EVNKVLLEMQGRGVLPDETTFNF 949
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
++ + +YL M S+ + P+ + +S G+ + L L M S
Sbjct: 950 LVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMES 1007
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+T L + + + P + Y+ ++ V G LD A EM+ EM + G PN F Y S G
Sbjct: 709 LTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 768
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
C G EA L++ ME RG P + ++G +G+L E V + M+ G
Sbjct: 769 LCMAGEFREACWLLKEMESRGCNPNFVVYS-TLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A L + + G P Y+ LI GY GE+ + +++ EM K P + + S+I+
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
LC G+ +A LK M+SR P+ +Y T++ + G + ++ EM
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%)
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L M G PS L + +++ + ++++A + KG LP TY+ +I+G
Sbjct: 709 LTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 768
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM 513
GE +E L EME + P V+++++ L + GKL +A K +K M
Sbjct: 769 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 31/287 (10%)
Query: 250 DRIMGERKRSSHSPSA----IVNSSLILRMVEKGHLV------------EEEGKRERVAV 293
DRI+ + +S SP I+ S ++ + + H V + + K E AV
Sbjct: 56 DRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAV 115
Query: 294 MVVTLLKRL------------LQQNLVPDSV-GYSLIVHAKVRLGSLDSALEMYEEMV-M 339
+ L R L+Q +P +V + ++ A + A +Y EM M
Sbjct: 116 RAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
G EP+ Y C+ G + ++ ME + +KP +F +I G + +
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDG-FYKEEKFD 234
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
E V M G +++ M++ LC+ + +A A + ++ P TYSLLI
Sbjct: 235 EVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLI 294
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
G+ ++ + E + L+ M P + ++I CLC+ G E A
Sbjct: 295 HGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 186 GFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRN 245
G L ++N ++ VL S S + + M R P A + +MID KE
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFD-E 235
Query: 246 VDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQ 305
V + R+M E H A N +++ KR++ A L+ ++
Sbjct: 236 VRKVMRMMDEF--GVHVGVATYNI-----------MIQCLCKRKKSA-EAKALIDGVMSC 281
Query: 306 NLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEA 365
+ P+SV YSL++H +LD A+ ++E MV +G++P+S Y + CK G + A
Sbjct: 282 RMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGS 395
+ L R + P ++ G A+ S
Sbjct: 342 LILCRESMEKNWVPSFSVMKWLVNGLASRS 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
P + + L++ + D ++ M G Y CK + EA L
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLC 428
+ G+ ++P T+ +I G + L+E + +FE M+ G+ P + ++ LC
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEEN-LDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKL 474
+ D E A ++K ++P + L+ G A++ +V E +L
Sbjct: 334 KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 75/168 (44%)
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFD 421
+D +++ R +E + ++ + ++ C E E G P +++
Sbjct: 127 LDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYN 186
Query: 422 KMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK 481
+M+ LCE+ + + + + K P ++ L+I G+ + + EV K+ M+
Sbjct: 187 RMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF 246
Query: 482 SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ G++ + +IQCLC+ K +A+ + + S + P+ Y +I
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLI 294
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK-EGRIDEAMELMRGMEGR 375
I+ V+ G LDS ++++++M G +P+ Y + G K + +A+EL+ +
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 376 GLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQ 435
G++ + V+ CA+ +GR EE + M G P+ + ++ D ++
Sbjct: 232 GIQMDSVMYGTVLAICAS-NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 436 ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQ 495
A+ +T + G +P + + L+K Y G +L E+E + ++
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 496 CLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
L + GKLE+A MK + + D MI++
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 141/342 (41%), Gaps = 16/342 (4%)
Query: 188 RVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVD 247
++S+++++S + + + VS ++Y+ + N ++ L K G L D
Sbjct: 129 KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKL----D 183
Query: 248 ALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNL 307
+ ++ + KR P + ++L+ G + + G + + L+ L +
Sbjct: 184 SCIKLFDQMKRDGLKPDVVTYNTLL-----AGCIKVKNGYPK-----AIELIGELPHNGI 233
Query: 308 VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAME 367
DSV Y ++ G + A ++M + G PN + Y+S + +G +A E
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 368 LMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
LM M+ GL P + ++ G + + + AG+ + + + +++ L
Sbjct: 294 LMTEMKSIGLVP-NKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGL 352
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
+ +E+A + + KG S++I +E +L + E L
Sbjct: 353 SKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDL 412
Query: 488 SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ +++ CR G++E + +K M + ++PD + +I
Sbjct: 413 VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 123/320 (38%), Gaps = 44/320 (13%)
Query: 175 AFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMID 234
A ++ ++ ++++ NS+L L ++ ++ +++ M R P+ VT ++
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 235 ALCKE-----------GLLQRNVDALDRIM---------------------GERKRSSHS 262
K G L N +D +M + K HS
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 263 PSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKV 322
P+ SSL+ KG + + L+ + LVP+ V + ++ +
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKAD-----------ELMTEMKSIGLVPNKVMMTTLLKVYI 318
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE 382
+ G D + E+ E+ +G+ N Y G K G+++EA + M+G+G++ G
Sbjct: 319 KGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGY 378
Query: 383 TFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTR 442
+ ++I S R +E + + + M+ C ++E + +
Sbjct: 379 A-NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
Query: 443 LLDKGFLPGETTYSLLIKGY 462
+ ++ P T+ +LIK +
Sbjct: 438 MDEQAVSPDYNTFHILIKYF 457
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 408 MLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGE 467
ML P+ ++++ M++ C+ V+ A L + KG P T+S LI GY
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 468 VQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYET 527
V ++++ EM + + +T++I C+ G L+ A+ L M S + PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 528 MIA 530
M+A
Sbjct: 121 MLA 123
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGR 361
+L+ ++ P ++ Y+ ++ + +D A M + M G P+ +++ G+CK R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 362 IDEAMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
+D ME+ M RG+ T+ +I G C G L+ + M+ G P ++F
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--LDAAQDLLNEMISCGVAPDYITF 118
Query: 421 DKMVEKLCENRDVEQANANLTRL 443
M+ LC +++ +A A L L
Sbjct: 119 HCMLAGLCSKKELRKAFAILEDL 141
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 217 MIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMV 276
M+R +P +T MID CK Q VD R++ SP + S+LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCK----QDRVDDAKRMLDSMASKGCSPDVVTFSTLI---- 52
Query: 277 EKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEE 336
G+ + KR + + + R + +V ++V Y+ ++H ++G LD+A ++ E
Sbjct: 53 -NGYC---KAKRVDNGMEIFCEMHR---RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 105
Query: 337 MVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
M+ G P+ + G C + + +A ++ ++
Sbjct: 106 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 258 RSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLI 317
R S P+ I +S+I ++ + ++ KR +L + + PD V +S +
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRV--DDAKR---------MLDSMASKGCSPDVVTFSTL 51
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
++ + +D+ +E++ EM G N+ YT+ GFC+ G +D A +L+ M G+
Sbjct: 52 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
P TF H ++ L + + E +
Sbjct: 112 APDYITF-HCMLAGLCSKKELRKAFAILEDL 141
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 124/316 (39%), Gaps = 30/316 (9%)
Query: 116 LITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKMRLTEAA 175
L+ + R E ++ G + + D L G + ++ Y K +T+ A
Sbjct: 66 LVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQA 125
Query: 176 FDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYP-NAVTLKIMID 234
D N++ G + S+ SFN+ L VL + + +W+ +AV+ I I
Sbjct: 126 LDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIK 185
Query: 235 ALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILR----------------MVEK 278
+ C+ G+L D M E ++S +P + ++LI MV K
Sbjct: 186 SFCELGIL----DGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLK 241
Query: 279 GHLVEEEGKRERVAVMVV--------TLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSA 330
G R+ +V LL + + + PDS+ Y++++ D A
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 331 LEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIG 390
+Y M G++PN +Y + CK G D A + + + P +T + ++ G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 391 CAAGSGRLEECLGVFE 406
G+L++ + E
Sbjct: 362 LVK-KGQLDQAKSIME 376
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 7/200 (3%)
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G + ++ + FC+ G +D A MR ME GL P T+ +I + + E
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLI----SALYKHER 227
Query: 401 CL---GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSL 457
C+ G++ M+ G P+ +F+ ++ L R AN L + P TY++
Sbjct: 228 CVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNM 287
Query: 458 LIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+IKG+ ++Y M K P L ++ ++I LC+ G + A K +
Sbjct: 288 VIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKK 347
Query: 518 LTPDVAIYETMIASHEQKGN 537
P++ E ++ +KG
Sbjct: 348 WYPNLDTVEMLLKGLVKKGQ 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 1/208 (0%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D+V +++ + + LG LD A EM SG P+ YT+ K R L
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M +G KP TF+ V I R + + M P ++++ +++
Sbjct: 236 NLMVLKGCKPNLTTFN-VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFL 294
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
R + A T + KG+ P Y +I G + + K P L
Sbjct: 295 ARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTMKSRL 517
+++ L + G+L+ A+ ++ + R+
Sbjct: 355 VEMLLKGLVKKGQLDQAKSIMELVHRRV 382
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
L + + Q+ LV ++V Y+ ++ + G D A E+++EMV G P+ Y G C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
K G++++A+ +G++E+ +F ++ G P+
Sbjct: 63 KNGKLEKALV---------------------------AGKVEDGWDLFCSLSLKGVKPNV 95
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+++ M+ C+ E+A ++ + G LP TY+ LI+ + G+ +L E
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 478 M 478
M
Sbjct: 156 M 156
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 366 MELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVE 425
MEL R M RGL T+ +I G +G + +F+ M+ G P ++++ +++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQ-AGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 426 KLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCP 485
LC+N +E+A G+V++ L+ + K + P
Sbjct: 60 GLCKNGKLEKA--------------------------LVAGKVEDGWDLFCSLSLKGVKP 93
Query: 486 GLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLC 545
+ +T++I C+ G E+A + MK PD Y T+I +H + G+ A +L
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 153
Query: 546 NEMAS 550
EM S
Sbjct: 154 KEMRS 158
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 185 RGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQR 244
RG + ++ +++ L ++ + ++++ M+ P+ +T I++D LCK G L++
Sbjct: 10 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEK 69
Query: 245 NV------DALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTL 298
+ D D + P+ + +++I +KG E TL
Sbjct: 70 ALVAGKVEDGWD-LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE-----------AYTL 117
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
+++ + +PDS Y+ ++ A +R G ++ E+ +EM F ++ Y T
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT-DMLH 176
Query: 359 EGRIDEA 365
+GR+D+
Sbjct: 177 DGRLDKG 183
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
+ N +T+ G+ + GR +EA+++ M+ G+ P T I CA S LEE
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS-SLEEGS 391
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
+ +G I + +V + D++ + TRL ++ + +++ ++ Y
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS----TRLFNEMNVRDAVSWTAMVSAY 447
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPD 521
A G E ++L+ +M + P T VI R G +E ++Y K M S + P
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 522 VAIYETMIASHEQKGNNARVLQLCNEM 548
+ Y MI + G ++ N M
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/452 (18%), Positives = 173/452 (38%), Gaps = 100/452 (22%)
Query: 162 LVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGR 221
+V YA M+ + A V + + +L S+N++L ++ +S + +E +
Sbjct: 47 IVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTFEKLPD-- 100
Query: 222 NYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHL 281
+ VT ++I+ GL+ V A + +M R S++ + + L L GH+
Sbjct: 101 --RDGVTWNVLIEGYSLSGLVGAAVKAYNTMM--RDFSANLTRVTLMTMLKLS-SSNGHV 155
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
GK+ V+ + LL VG S +++ +G + A +++ +
Sbjct: 156 --SLGKQIHGQVIKLGFESYLL--------VG-SPLLYMYANVGCISDAKKVFYGLD--- 201
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEG--------------------------- 374
+ N+ +Y S GG G I++A++L RGME
Sbjct: 202 -DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 375 ---RGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
+GLK F V+ C G G + E + ++ F +++ C+ +
Sbjct: 261 MKVQGLKMDQYPFGSVLPAC-GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG----- 486
+ A R+ K + +++ ++ GY G +E +K++ +M+ + P
Sbjct: 320 CLHYAKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 487 ------------------------------LSVFTSVIQCLCRCGKLEDAEKYLKTMKSR 516
++V S++ +CG ++D+ + M R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 517 LLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
D + M++++ Q G +QL ++M
Sbjct: 436 ----DAVSWTAMVSAYAQFGRAVETIQLFDKM 463
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 159/396 (40%), Gaps = 36/396 (9%)
Query: 160 DLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIR 219
+L++ Y + L E A +C + + + +++ R++ + L +V + IR
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 220 GRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
+ V ++D K G + D S+ I+ ++L+ E G
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFD--------STVEKDLILWNTLLAAYAESG 455
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
+ E R L + + + P+ + ++LI+ + +R G +D A +M+ +M
Sbjct: 456 --LSGEALR---------LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
SG PN +T+ G + G +EA+ +R M+ GL+P + + CA +
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS--- 561
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL- 458
L + + G+I L +V D+ ++ + +K F G YS L
Sbjct: 562 --LHIGRTI--HGYIIRNLQHSSLVSIETSLVDMYAKCGDINK-AEKVF--GSKLYSELP 614
Query: 459 -----IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA-EKYLKT 512
I YA G ++E + LY +E + P T+V+ G + A E +
Sbjct: 615 LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Query: 513 MKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ R + P + Y M+ G + L+L EM
Sbjct: 675 VSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVE 283
PN +T ++I +L + G VD + + + S P+ I ++++ MV+ G
Sbjct: 474 PNVITWNLIILSLLRNG----QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG--CS 527
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
EE + L+++ + L P++ ++ + A L SL ++ ++ +
Sbjct: 528 EEA---------ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG-YIIRNLQ 577
Query: 344 PNSFVY--TSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGE-TFDHVIIGCAAGSGRLEE 400
+S V TS + K G I++A ++ G K Y E + +I A G L+E
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVF------GSKLYSELPLSNAMISAYALYGNLKE 631
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK-GFLPGETTYSLLI 459
+ ++ ++ G G P ++ ++ D+ QA T ++ K P Y L++
Sbjct: 632 AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMV 691
Query: 460 KGYAAKGEVQEVLKLYYEMEYK 481
A+ GE ++ L+L EM +K
Sbjct: 692 DLLASAGETEKALRLIEEMPFK 713
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 112/284 (39%), Gaps = 40/284 (14%)
Query: 284 EEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFE 343
+ GK E + L + +Q + P V S + A +G ++ + + +++G E
Sbjct: 251 QNGKNEEA----IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 344 PNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLG 403
++ + TS +CK G I+ A + M + + + ++II G +E+ +
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTW-----NLIISGYVQQGLVEDAIY 361
Query: 404 VFEAM---------------LGAGFIPSCLSFDKMVEKLCENRDVEQ------------- 435
+ + M + A L K V+ C E
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 436 ---ANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTS 492
+ + ++ D ++ L+ YA G E L+L+Y M+ + + P + +
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 493 VIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKG 536
+I L R G++++A+ M+S + P++ + TM+ Q G
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ K + + N+ D+ GY++I+H + G D A ++ +++SG +P+ Y F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
GR A +L M RGL P T++ +I G +L + V + SC
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCK-QNKLAQARKVSK---------SC 106
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYE 477
+F+ ++ C+ V+ + +G + TY+ LI G+ G+ L ++ E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 478 MEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAI 524
M + F ++ LC +L A L KS +++ +V +
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRKAVAML-LQKSSMVSNNVTL 212
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 177/440 (40%), Gaps = 73/440 (16%)
Query: 111 LVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYA--- 167
+++ G+ D+ L RD GA+ V F GS+ V + LV+ Y+
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 168 KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV 227
M + FD C + + + ++ +N + + + + L+ ++ +++ P +V
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYN---RMKEYEESIELLVEMERNLVS----PTSV 237
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
TL +++ A K ++ D R+ PS + ++L+ G +
Sbjct: 238 TLLLVLSACSK----VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM------ 287
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
+AV R+ + D + ++ IV V G+L A +++M + +
Sbjct: 288 --DIAV-------RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRI 334
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA-AGSGRLEECLGVFE 406
+T G+ + G +E++E+ R M+ G+ P T V+ CA GS + E + +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY- 393
Query: 407 AMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPG--------------- 451
++K DV NA L+D F G
Sbjct: 394 -----------------IDKNKIKNDVVVGNA----LIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 452 -ETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYL 510
+ T++ ++ G A G+ QE +K++++M+ S+ P + V+ G ++ A K+
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 511 KTMKS-RLLTPDVAIYETMI 529
M+S + P + Y M+
Sbjct: 493 AKMRSDHRIEPSLVHYGCMV 512
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
SG+ ++T + + ++ + M P + + ++ + G L+
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
+ +F++ G +P+ S++ +++ C N D+ A ++L++ +P +Y +LI
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
+G+ KG+V ++L +M K P ++I LC G ++ +KYL+ M S+ +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 520 PDVAIYETMI 529
P ++ ++
Sbjct: 289 PHFSVSNCLV 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 307 LVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAM 366
++P++ Y+L++ A L A +++ +M+ P+ Y GFC++G+++ AM
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEK 426
EL+ M +G P D +IG G +E E M+ GF P + +V+
Sbjct: 246 ELLDDMLNKGFVP-----DRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 427 LCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
C VE+A + ++ G T+ ++I + E E +KL+ E K G
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKLFLEDAVKEEITG 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 295 VVTLLKRLLQQNLVPDSVGYSLIVHAKV-RLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
V++ ++L+ N P + I+ V G L A E+++ + G PN+ Y
Sbjct: 138 VLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLM 197
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF 413
FC + A +L M R + P +++ +I G G++ + + + ML GF
Sbjct: 198 QAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR-KGQVNGAMELLDDMLNKGF 256
Query: 414 IPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLK 473
+P ++ LC+ ++ L ++ KGF P + + L+KG+ + G+V+E
Sbjct: 257 VPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACD 312
Query: 474 LYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
+ + + VI +C + E + +L+ +T D I + I
Sbjct: 313 VVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGI 368
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ K++ + L+P++V ++ + G + A++++ M G P +YT+ FC
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
K +I++A + R M+ G+ P ++ ++ G L++ + ML +G P+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
+F ++V+ LC + VEQA + + L KGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL 271
++++ M G PNAV M+D LCK+GL+Q + ++ G + P ++ +++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAM----KLFGLMRDKGTIPEVVIYTAV 172
Query: 272 ILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL 331
+ K H + E+ KR + +++ + P++ Y ++V LD A+
Sbjct: 173 VEAFC-KAHKI-EDAKR---------IFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 332 EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
EM+ SG PN + C+ +++A + + +G
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E+ +F+ M G IP+ ++ M++ LC++ V++A + DKG +P Y+ +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
++ + ++++ +++ +M+ + P + ++Q L C L+DA + M
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 519 TPDVAIYETMI 529
+P+V + ++
Sbjct: 233 SPNVPTFVELV 243
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ K++ + L+P++V ++ + G + A++++ M G P +YT+ FC
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
K +I++A + R M+ G+ P ++ ++ G L++ + ML +G P+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 418 LSFDKMVEKLCENRDVEQANANLTRLLDKGF 448
+F ++V+ LC + VEQA + + L KGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 212 DVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSL 271
++++ M G PNAV M+D LCK+GL+Q + ++ G + P ++ +++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAM----KLFGLMRDKGTIPEVVIYTAV 172
Query: 272 ILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSAL 331
+ K H + E+ KR + +++ + P++ Y ++V LD A+
Sbjct: 173 VEAFC-KAHKI-EDAKR---------IFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 332 EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
EM+ SG PN + C+ +++A + + +G
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
E+ +F+ M G IP+ ++ M++ LC++ V++A + DKG +P Y+ +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
++ + ++++ +++ +M+ + P + ++Q L C L+DA + M
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 519 TPDVAIYETMI 529
+P+V + ++
Sbjct: 233 SPNVPTFVELV 243
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 174/448 (38%), Gaps = 61/448 (13%)
Query: 108 IHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYA 167
H+ +R G + DAR + + ++ K+ VT S L+ YA
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKD-------VVTCSA-----------------LLCAYA 193
Query: 168 KMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAV 227
+ E + +E+ G ++ S+N +L RS +++ + P+ V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 228 TLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGK 287
T+ ++ ++ +L N+ L I G + V S++I + GH
Sbjct: 254 TVSSVLPSVGDSEML--NMGRL--IHGYVIKQGLLKDKCVISAMIDMYGKSGH------- 302
Query: 288 RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSF 347
V ++ Q ++ V + I R G +D ALEM+E E N
Sbjct: 303 -------VYGIISLFNQFEMMEAGVCNAYITGLS-RNGLVDKALEMFELFKEQTMELNVV 354
Query: 348 VYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGC----AAGSGRLEECLG 403
+TS G + G+ EA+EL R M+ G+KP T ++ C A G GR
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 404 VFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGET--TYSLLIKG 461
V +L + S L M K C ++ Q N+ +P + ++ L+ G
Sbjct: 415 VRVHLLDNVHVGSALI--DMYAK-CGRINLSQIVFNM--------MPTKNLVCWNSLMNG 463
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTP 520
++ G+ +EV+ ++ + + P FTS++ + G ++ KY K M + P
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
+ Y M+ + G L EM
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
Y+ +++ R LD +EEM+ GF PN+ + + K + EL +
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Query: 374 GRG----------LKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
G + YG+ D+ + A + + + GF S +++ +
Sbjct: 727 RHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD------------GFSVSLEAYNTL 774
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
++ +++ +E+ + L R+ P TY+++I Y +G + EV + E++ +
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
P L + ++I+ G +E+A +K M+ R + PD Y ++ +
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 113/282 (40%), Gaps = 36/282 (12%)
Query: 302 LLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM-VMSGFEPNSFVYTSFTGGFCKEG 360
L +V D +G+S++V V+ GSL+ A + E M P+ +++ + K
Sbjct: 584 LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCD 643
Query: 361 RIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSF 420
D+ L + G+ E ++ +I C A + L+E G FE M+ GF P+ ++F
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYN-CVINCCARALPLDELSGTFEEMIRYGFTPNTVTF 702
Query: 421 D---------KMVEKLCE-------------------------NRDVEQANANLTRLLDK 446
+ K+ +K+ E N+D ++ + +
Sbjct: 703 NVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
GF Y+ L+ Y ++++ + M+ + P + +I G +++
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 507 EKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
LK +K L PD+ Y T+I ++ G + L EM
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 104 YSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLV 163
+SI + + V+AG + +A ++LE + D D V V + ++
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLE--------------IMDEQKDIVPDVY-----LFRDML 636
Query: 164 QTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNY 223
+ Y K L + + + G + +N V++ R+ + + +E MIR
Sbjct: 637 RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Query: 224 PNAVTLKIMIDALCKEGLLQR--------------NVDALDRIM---GERKRSSHSPSAI 266
PN VT +++D K L ++ +V + + I+ G+ K ++ SAI
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAI 756
Query: 267 VN---SSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVR 323
N + + L++ GK +++ ++LKR+ + PD Y+++++
Sbjct: 757 KNMQFDGFSVSLEAYNTLLDAYGKDKQME-KFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 324 LGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGET 383
G +D ++ +E+ SG P+ Y + + G ++EA+ L++ M GR + P T
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 384 FDHVI 388
+ +++
Sbjct: 876 YTNLV 880
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 121/604 (20%), Positives = 233/604 (38%), Gaps = 129/604 (21%)
Query: 29 SNHNAVDDVAAAICDSFR-------RRRSWDAVSRKF------------------GSLEL 63
+N NA++ +AA + R +R + V+RKF G +++
Sbjct: 69 ANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLFVNNGEIDV 128
Query: 64 NDSLVEQ---------VLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRA 114
N S ++ +L L+ +D A+ FF W + +YS+ + VL R
Sbjct: 129 NYSAIKPGQSLEHCNGILKRLESCSDT-NAIKFFDWMRCNGKLVGNFVAYSLILRVLGRR 187
Query: 115 GLITDARALLESLAAKNRDPGAVRAVTDSLIDA------VGFVSGSHRPVLDLLVQ-TYA 167
A L++ L + + + V +++I A V S +L+ V+ A
Sbjct: 188 EEWDRAEDLIKELCGFHEFQKSYQ-VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVA 246
Query: 168 KMRLTEAAFDVCCNVEARGFRVSL---------ASFNSVLHVLQRSDRVSLVWDVYEHMI 218
+ + + NVE F S ++++S++ + R +V + M
Sbjct: 247 TIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMK 306
Query: 219 RGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEK 278
+ R +M++A ++G ++ + I+ + + SP+ I ++LI
Sbjct: 307 QDRVRLKLENWLVMLNAYSQQG----KMELAESILVSMEAAGFSPNIIAYNTLI---TGY 359
Query: 279 GHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMV 338
G + + E + L RL L PD Y ++ R + + A Y+E+
Sbjct: 360 GKIFKMEAAQ--------GLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG----------LKPY-------- 380
G++PNSF + K G D A++ + M G G L+ Y
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDV 471
Query: 381 ------GETFDHVIIGCAAGS---------GRLEECLGV----------FEAMLGAGFIP 415
G +H+ + + S G +++CLG+ FE+ L I
Sbjct: 472 VPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLIC 531
Query: 416 SCLSFDKMVE--KLCENR--DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEV 471
SC ++ + K+ ++ E+ N ++T S +I Y GE E
Sbjct: 532 SCKESGQLTDAVKIYNHKMESDEEINLHIT--------------STMIDIYTVMGEFSEA 577
Query: 472 LKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM-KSRLLTPDVAIYETMIA 530
KLY ++ + F+ V++ + G LE+A L+ M + + + PDV ++ M+
Sbjct: 578 EKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR 637
Query: 531 SHEQ 534
+++
Sbjct: 638 IYQK 641
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 33/265 (12%)
Query: 72 LLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKN 131
+L + D + L ++ + + Y+ I+ RA + + E +
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 694
Query: 132 RDPGAVRAVTDSLIDAVG-----------FVSGSHRPVLDLL-----VQTYAKMRLTEAA 175
P V + L+D G F+ V+D++ + Y K +
Sbjct: 695 FTPNTV--TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNM 752
Query: 176 FDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDA 235
N++ GF VSL ++N++L + ++ + + M + + P+ T IMI+
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 236 LCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMV 295
++G +D + ++ E K S P ++LI + G +VEE
Sbjct: 813 YGEQGW----IDEVADVLKELKESGLGPDLCSYNTLI-KAYGIGGMVEE----------A 857
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHA 320
V L+K + +N++PD V Y+ +V A
Sbjct: 858 VGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 151/368 (41%), Gaps = 34/368 (9%)
Query: 187 FRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNV 246
F+ S FN+V++ + V L + M+ PN T+ +++ GL Q+N
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM------GLYQKNW 259
Query: 247 DALD--------RIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTL 298
+ + R G S++S + + LR+ +K V + K++RV
Sbjct: 260 NVEEAEFAFSHMRKFGIVCESAYSSMITIYTR--LRLYDKAEEVIDLMKQDRV------- 310
Query: 299 LKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCK 358
RL +N + ++++A + G ++ A + M +GF PN Y + G+ K
Sbjct: 311 --RLKLENWL-------VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGK 361
Query: 359 EGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCL 418
+++ A L + GL+P ++ +I G EE ++ + G+ P+
Sbjct: 362 IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN-YEEAKHYYQELKRCGYKPNSF 420
Query: 419 SFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM 478
+ ++ + D + A + + G + ++++ Y G++ V +
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVLKGS 479
Query: 479 EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNN 538
+ + + F+S++ + G ++D L+ K R + +Y +I S ++ G
Sbjct: 480 FHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQL 539
Query: 539 ARVLQLCN 546
+++ N
Sbjct: 540 TDAVKIYN 547
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 128/345 (37%), Gaps = 64/345 (18%)
Query: 224 PNAVTLKIMIDALCKEGLLQRNVDALDRIM--GERKRSSHSPSAIVNSSLILRMVEKGHL 281
P+ V MI G + ++ +M G R RSS +L+ + GHL
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS---------TLVSLVPVSGHL 335
Query: 282 VEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ ++ + L+ N + + + + +L ++SA ++++E
Sbjct: 336 M-----------LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE----S 380
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEEC 401
E + + + G+ + G ++A+ L R M+ P T ++ CA
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA--------- 431
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN----------------ANLTRLLD 445
LGA LS K V L + D E + A RL D
Sbjct: 432 ------QLGA------LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
E T++ +I GY G+ QE L ++YEM + P F V+ G +++
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 506 AEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQLCNEMA 549
++ +M R P V Y M+ + G+ R LQ M+
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS 584
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 349 YTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM 408
+ GGF K+ +I EA + M R + + + II A SG+++E +F+
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW-----NTIITGYAQSGKIDEARQLFDE- 275
Query: 409 LGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEV 468
+ ++ MV +NR VE+A L DK E +++ ++ GY +GE
Sbjct: 276 ---SPVQDVFTWTAMVSGYIQNRMVEEAR----ELFDKMPERNEVSWNAMLAGY-VQGER 327
Query: 469 QEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETM 528
E+ K +++ C +S + ++I +CGK+ +A+ M R D + M
Sbjct: 328 MEMAKELFDV---MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAM 380
Query: 529 IASHEQKGNNARVLQLCNEM 548
IA + Q G++ L+L +M
Sbjct: 381 IAGYSQSGHSFEALRLFVQM 400
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 174/461 (37%), Gaps = 100/461 (21%)
Query: 96 RFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGS- 154
R N + S++ + V+ I +AR +S+ VR V G+
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFFDSMN--------VRDVVSWNTIITGYAQSGK 265
Query: 155 ---------HRPVLDLLVQT-----YAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHV 200
PV D+ T Y + R+ E A ++ + R + S+N++L
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAG 321
Query: 201 LQRSDRVSLVWDVYEHMIRGRNYP--NAVTLKIMIDALCKEGLLQRNVDALDRIMGERKR 258
+ +R+ + ++++ M P N T MI + G + + D++ KR
Sbjct: 322 YVQGERMEMAKELFDVM------PCRNVSTWNTMITGYAQCGKISEAKNLFDKM---PKR 372
Query: 259 SSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIV 318
S +A +I + GH E + L ++ ++ + +S +
Sbjct: 373 DPVSWAA-----MIAGYSQSGHSFE-----------ALRLFVQMEREGGRLNRSSFSSAL 416
Query: 319 HAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLK 378
+ +L+ +++ +V G+E FV + +CK G I+EA +L + M G+ +
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 379 PYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANA 438
+ + +I + G E L FE+M G P + MV L +
Sbjct: 477 SW-----NTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT---MVAVL--------SAC 520
Query: 439 NLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM--EYKSMCPGLSVFTSVIQC 496
+ T L+DKG + +Y M +Y M P + ++
Sbjct: 521 SHTGLVDKG------------------------RQYFYTMTQDYGVM-PNSQHYACMVDL 555
Query: 497 LCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
L R G LEDA +K M PD AI+ T++ + GN
Sbjct: 556 LGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGASRVHGN 593
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 44/246 (17%)
Query: 293 VMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF 352
V ++ L K +L PD + ++ V + SL +++ + +G P F+
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 353 TGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAG 412
+ K G + +A + M+ R + + +I+G A SG EE L +F+ M AG
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWST----LIVG-YAQSGFGEEALILFKEMKSAG 569
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
+E P T+ ++ + G V+E L
Sbjct: 570 --------------------IE---------------PNHVTFVGVLTACSHVGLVEEGL 594
Query: 473 KLYYEMEYK-SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
KLY M+ + + P + V+ L R G+L +AE+++ MK L PDV +++T++++
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSA 651
Query: 532 HEQKGN 537
+ +GN
Sbjct: 652 CKTQGN 657
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 332 EMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGC 391
E+ +EM G+ P+ + + ++G+ DEA E + ME G + ++ G
Sbjct: 418 ELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEG- 476
Query: 392 AAGSGRLEECLGVFEAMLG-AGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFL- 449
SG L+E L FE M+G G + SF+K+V C V A L+ + K L
Sbjct: 477 YCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLK 536
Query: 450 PGETTY-----SLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLE 504
P +TY +LL K A G +E L L M+ P + F S GK
Sbjct: 537 PRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSS---TGKST 593
Query: 505 DAEKYLKTMKSR---LLTPDVAIYETMIAS--HEQKG-----------NNARVLQLCNEM 548
+A +LK M S ++ + ++ETM+ S H + NN VL+L N M
Sbjct: 594 EALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTM 653
Query: 549 ASLE 552
E
Sbjct: 654 KPNE 657
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/481 (18%), Positives = 186/481 (38%), Gaps = 81/481 (16%)
Query: 103 SYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLL 162
SY+I I + VR GL DA ++ + ++ V+ V D FV+ + + +
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSE-----GVKCVPDGY--TYPFVAKAAGELKSMK 134
Query: 163 VQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRN 222
+ R+ + F V+ N++L + +V + DV++ M + R+
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQ-----------NALLAMYMNFGKVEMARDVFDVM-KNRD 182
Query: 223 YPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLV 282
++ MI + G + + D ++ E H+ +++ + GHL
Sbjct: 183 ---VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHA-------TIVSMLPVCGHLK 232
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGY-SLIVHAKVRLGSLDSALEMYEEMVMSG 341
+ E R + +L+++ + D + + +V+ ++ G +D A +++ M
Sbjct: 233 DLEMGRN---------VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME--- 280
Query: 342 FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA--------- 392
+ +T G+ ++G ++ A+EL R M+ G++P T ++ C
Sbjct: 281 -RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Query: 393 -------------------------AGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
A R++ C VF P + ++
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGC 395
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGL 487
+N V A R+ + P T + L+ YAA ++++ + ++ + L
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 488 SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNE 547
T ++ +CG LE A K ++ + + DV ++ +I+ + G+ LQ+ E
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 515
Query: 548 M 548
M
Sbjct: 516 M 516
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 153/391 (39%), Gaps = 75/391 (19%)
Query: 88 FHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDA 147
F + ++ RF + Y + LV A + +LE K RD +
Sbjct: 61 FKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEE-QKKYRD-----------MSK 108
Query: 148 VGFVSGSHRPVLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRV 207
GF + ++ Y K + E A V + R + S+ SFN++L + S +
Sbjct: 109 EGFAAR--------IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKF 160
Query: 208 SLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIV 267
+V +++ + P +++K P +
Sbjct: 161 DVVEELFNEL------PGKLSIK--------------------------------PDIVS 182
Query: 268 NSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSL 327
++LI + EK L E V LL + + L PD V ++ ++ + G
Sbjct: 183 YNTLIKALCEKDSLPE-----------AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 328 DSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV 387
+ E++ +MV + Y + G E + E + L ++ GLKP +F+ +
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 388 IIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKG 447
I G + G+++E ++ ++ G+ P +F ++ +C+ D E A K
Sbjct: 292 IRG-SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
Query: 448 FLPGETTYSL----LIKGYAAKGEVQEVLKL 474
+L G+TT L+KG + + E +E++K+
Sbjct: 351 YLVGQTTLQQLVDELVKG-SKREEAEEIVKI 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 323 RLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGR-GLKPYG 381
+ G ++A +++EEM + + + + + + D EL + G+ +KP
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 382 ETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
+++ +I C S L E + + + + G P ++F+ ++ E
Sbjct: 181 VSYNTLIKALCEKDS--LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
++++K TY+ + G A + + +E++ L+ E++ + P + F ++I+
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMAS 550
GK+++AE + K + PD A + ++ + + G+ ++L E S
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFS 348
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 39/284 (13%)
Query: 298 LLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFC 357
+ K++L +N ++ V A + S+ + +++ ++ GF+ N V S +C
Sbjct: 200 MYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 358 KEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+ G + EA ME + L + + E L +F+ GF+P+C
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLISEL------ERSDSSEALLMFQRFESQGFVPNC 313
Query: 418 LSFDKMVEKLCE-------------------NRDVEQANANLTRLLDKGFLP------GE 452
+F +V N++VE ANA + G +P GE
Sbjct: 314 YTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 453 -------TTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+++ ++ GY + G E ++L+ +M + P VF +V+ G +E
Sbjct: 374 IVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEK 433
Query: 506 AEKYLKTMKSRL-LTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
KY M+S + PD IY ++ + G +L M
Sbjct: 434 GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 152/378 (40%), Gaps = 33/378 (8%)
Query: 162 LVQTYAKM-RLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRG 220
LV Y+K+ L + V ++ R ++ S+N ++ RS S D++ M R
Sbjct: 72 LVLAYSKLNHLFPTSLSVFWHMPYR----NIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 221 RNY-PNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKG 279
P+ TL +++ A C R + D I + S S V+S+L++ V+ G
Sbjct: 128 SCVRPDDFTLPLILRA-CSA---SREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 280 HLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVM 339
L+ ++L V DSV Y+ + V+ G L M+ EM
Sbjct: 184 KLLHA---------------RKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY 228
Query: 340 SGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLE 399
SGF +S V S + G + + G R G + I L+
Sbjct: 229 SGFALDSVVMVSLLMACGQLGALKHGKSV-HGWCIRRCSCLGLNLGNAITDMYVKCSILD 287
Query: 400 ECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
VF M I S+ ++ + DV + +L +G P T+ ++
Sbjct: 288 YAHTVFVNMSRRDVI----SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL 343
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
A G V++ + M+ ++ P L + SV C+ R G LE+AEK+L+ M +
Sbjct: 344 SACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK--- 400
Query: 520 PDVAIYETMIASHEQKGN 537
PD A+ +++ + GN
Sbjct: 401 PDEAVMGAVLSGCKVYGN 418
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 51/260 (19%)
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++H G + SA +++++M E + + S GF + G+ +EA+ L M +G
Sbjct: 162 LLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 377 LKPYGETFDHVIIGCA----------------------------------AGSGRLEECL 402
+KP G T ++ CA A GR+EE
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD--KGFLPGETTYSLLIK 460
+F+ M+ + +S+ ++ L N ++A L + ++ +G LP E T+ ++
Sbjct: 278 TLFDEMVDK----NSVSWTSLIVGLAVNGFGKEA-IELFKYMESTEGLLPCEITFVGILY 332
Query: 461 GYAAKGEVQEVLKLYYEM--EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ G V+E + + M EYK + P + F ++ L R G+++ A +Y+K+M +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYK-IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---M 388
Query: 519 TPDVAIYETMIASHEQKGNN 538
P+V I+ T++ + G++
Sbjct: 389 QPNVVIWRTLLGACTVHGDS 408
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 323 RLGSLDSALEMYEEMVMSGFEPNS-FVYTSFTGGFCKEGRIDEAMELMRGME-GRGLKPY 380
R ++ A + + MV SG + + + T C G I A EL+ M +G+K
Sbjct: 186 RCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKAN 245
Query: 381 GETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANL 440
TF +IGC EE V + M + S+ +++ VE+A +
Sbjct: 246 IVTFKS-MIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLV 304
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+ DK Y+L++ GY+ G V++V++LY EM + + P + ++ LC+
Sbjct: 305 LMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKA 364
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
GK+ +A +L ++ D +Y T+ + G + L++ EM
Sbjct: 365 GKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEM 412
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 36/282 (12%)
Query: 198 LHVL--QRSDRVSLVWDVYEHMIR-GRNYPNAVTLKIMIDALCKEGLLQRN---VDALDR 251
LH+L +R D++ L D + M+ G + +L +++ LC G + R V+ +
Sbjct: 179 LHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGL 238
Query: 252 IMGERKRSSHSPSAI---------VNSSLILRMVEKGHLV-------------EEEGKRE 289
+ G + S I L+L+++EK ++ GK E
Sbjct: 239 VKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 290 RVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVY 349
+V+ + + L+ +S Y+LI++ R G ++ +E+Y EM G PN Y
Sbjct: 299 EAERLVLMMHDKKLR----VESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTY 354
Query: 350 TSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAML 409
G CK G++ EAM + + + E + + C G +++ L V M+
Sbjct: 355 WVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYR-VGMIDKSLEVVAEMI 413
Query: 410 GAGFIPSCLSFDKMVEKLCE-NRDVEQANANLTRLLDKGFLP 450
GFIP +++ + L E NR ++A +T ++ G P
Sbjct: 414 RDGFIPGATICERLADSLFEVNR--KEAQMLITIVVKCGIKP 453
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 6/208 (2%)
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAA-GSGRLEEC 401
E + + S GF + G I EA+ L M + P G T + CA+ GS +
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 402 LGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKG 461
L + LG S +++ + D + A + +K + T+S +I G
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI----TWSAMIGG 520
Query: 462 YAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTM-KSRLLTP 520
Y +G+ L+L+ EM K P S FTS++ G + + +KY +M K TP
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTP 580
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEM 548
Y M+ + G + L + +M
Sbjct: 581 STKHYTCMVDMLARAGELEQALDIIEKM 608
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 310 DSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
D V ++ ++ + G D A++ + M G+EP++ +S + GR+D E+
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
+ RG++ + + +I A G LE VFE++ + S + M+ L
Sbjct: 298 SLINHRGIE-LNQFVSNALIDMYAKCGDLENATSVFESI----SVRSVACCNSMISCLAI 352
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSV 489
+ ++A + + P E T+ ++ G + E LK++ EM+ + + P +
Sbjct: 353 HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKH 412
Query: 490 FTSVIQCLCRCGKLEDAEKYLKTM 513
F +I L R GKL++A + +K M
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 314 YSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGME 373
+SL++ R+G + A ++ + F + ++ + G+ + G D+A++ M+
Sbjct: 211 WSLMMSGYFRIGDVHEARAIFYRV----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 374 GRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDV 433
G G +P T ++ CA SGRL+ V + G + + +++ + D+
Sbjct: 267 GEGYEPDAVTVSSILSACAQ-SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 434 EQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSV 493
E N T + + + + +I A G+ +E L+++ ME + P F +V
Sbjct: 326 E----NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 494 IQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
+ G L + K MK++ + P+V + +I + G +L EM
Sbjct: 382 LTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 51/260 (19%)
Query: 317 IVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRG 376
++H G + SA +++++M E + + S GF + G+ +EA+ L M +G
Sbjct: 29 LLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 84
Query: 377 LKPYGETFDHVIIGCA----------------------------------AGSGRLEECL 402
+KP G T ++ CA A GR+EE
Sbjct: 85 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLD--KGFLPGETTYSLLIK 460
+F+ M+ + +S+ ++ L N ++A L + ++ +G LP E T+ ++
Sbjct: 145 TLFDEMVDK----NSVSWTSLIVGLAVNGFGKEA-IELFKYMESTEGLLPCEITFVGILY 199
Query: 461 GYAAKGEVQEVLKLYYEM--EYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
+ G V+E + + M EYK + P + F ++ L R G+++ A +Y+K+M +
Sbjct: 200 ACSHCGMVKEGFEYFRRMREEYK-IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---M 255
Query: 519 TPDVAIYETMIASHEQKGNN 538
P+V I+ T++ + G++
Sbjct: 256 QPNVVIWRTLLGACTVHGDS 275
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 145/392 (36%), Gaps = 62/392 (15%)
Query: 60 SLELNDSLVEQVLLELKDPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
S+ + +LV QV+ K+ + L FF WS K+ + + ++ + VL T
Sbjct: 62 SVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTA 121
Query: 120 ARALLESLAAKNR--DPGAVRAVTDSLI------DAVGFVSGSHRPVLDLLVQTYAKMRL 171
+ LL L +NR D V ++L+ DA+G +LD K
Sbjct: 122 MQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFK-----ILD-------KFSC 169
Query: 172 TEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVS-----------LVWDVYEHMIRG 220
+ F V + A R + V+H D +S W V ++
Sbjct: 170 PQDGFTVTAIISALCSRGHVKRALGVMH--HHKDVISGNELSVYRSLLFGWSVQRNVKEA 227
Query: 221 RN-YPNAVTLKIMIDALCKEGLL----QRNVDALDRIMGERKRSSHSPSAIVNSSLILRM 275
R + + I D C LL +RNV+ +PS +V +L + +
Sbjct: 228 RRVIQDMKSAGITPDLFCFNSLLTCLCERNVN-------------RNPSGLVPEALNIML 274
Query: 276 VEKGHLVEEEGK----------RERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLG 325
+ + ++ R R +L+++ + PD+ Y +V G
Sbjct: 275 EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334
Query: 326 SLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFD 385
++ +EM+ GF P Y G C R++ A++L M+ + YG+ +D
Sbjct: 335 RFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYD 394
Query: 386 HVIIGCAAGSGRLEECLGVFEAMLGAGFIPSC 417
+I G G E+ ++E L SC
Sbjct: 395 LLIPKLCKG-GNFEKGRELWEEALSIDVTLSC 425
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
V +++++ G +D AL ++ M+ SG +P+ S G K G ++E +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG----SLETGKW 378
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP--SCLSFDKMVEKLCE 429
++ R YG D+V+I C A +C + EA P + +++ M+
Sbjct: 379 IDARA-DIYGCKRDNVMI-CNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM-EYKSMCPGLS 488
N +A ++++D + P T+ +++ A G +++ + ++ M + ++ PGL
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMI 529
++ ++ L R GKLE+A + ++ M ++ PD I+ ++
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALL 534
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 157/386 (40%), Gaps = 44/386 (11%)
Query: 158 VLDLLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHM 217
++DL + + ++R + FD R + L S+NS++ + +++ +++ M
Sbjct: 288 LIDLYAE-FGRLRDCQKVFD-------RMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 218 IRGRNYPNAVTLKIMIDALCKEGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVE 277
R P+ +TL + L + G ++ A + G R I + ++ M
Sbjct: 340 RLSRIQPDCLTLISLASILSQLG----DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 278 KGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEM 337
K LV+ A V L D + ++ I+ + G A+EMY M
Sbjct: 396 KLGLVDS-------ARAVFNWLPN-------TDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 338 VMSG-FEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAG-- 394
G N + S + G + + M+L GR LK G D ++ A
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKL----HGRLLKN-GLYLDVFVVTSLADMY 496
Query: 395 --SGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGE 452
GRLE+ L +F + +P ++ ++ + E+A +LD+G P
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 453 TTYSLLIKGYAAKGEVQEVLKLYYEMEYK-SMCPGLSVFTSVIQCLCRCGKLEDAEKYLK 511
T+ L+ + G V E + M+ + P L + ++ R G+LE A K++K
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 512 TMKSRLLTPDVAIYETMIASHEQKGN 537
+M L PD +I+ ++++ GN
Sbjct: 613 SMS---LQPDASIWGALLSACRVHGN 635
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+++ + L Q+ + V ++ ++ + G +D ALE+++EM E N + S
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKA 180
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
+ GRIDEAM L M R + + D + A +G+++E +F+ M I
Sbjct: 181 LVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL-----AKNGKVDEARRLFDCMPERNII- 234
Query: 416 SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLY 475
S++ M+ +N +++A+ + ++ F +++ +I G+ E+ + L+
Sbjct: 235 ---SWNAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLF 287
Query: 476 YEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA-EKYLKTMKSRLLTPDVAIYETMIAS 531
M K++ +T++I + E+A + K ++ + P+V Y +++++
Sbjct: 288 DRMPEKNVIS----WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 115/273 (42%), Gaps = 55/273 (20%)
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFV--YTSFTGGFCKEGRIDEAMELM 369
V ++ +V A V+ G +D A+ ++E M P V +T+ G K G++DEA L
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERM------PRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCE 429
M R + + + +I A + R++E +F+ M F S++ M+
Sbjct: 226 DCMPERNIISW-----NAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIR 276
Query: 430 NRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEM-EYKSMCPGLS 488
NR++ +A R+ +K + +++ +I GY E +E L ++ +M S+ P +
Sbjct: 277 NREMNKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 489 VFTSVIQCLCRCGKLEDAEKYLKTM------KSRLLTP---------------------- 520
+ S++ L + ++ + + K+ ++T
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 521 -----DVAIYETMIASHEQKGNNARVLQLCNEM 548
D+ + +MIA + G+ +++ N+M
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRG 371
V ++ +V +R L A +++EM E N + + G+ + GRID+A+EL
Sbjct: 110 VTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 372 MEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
M R + + ++ GR++E + +FE M + S+ MV+ L +N
Sbjct: 166 MPERNIVSWNS-----MVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNG 216
Query: 432 DVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFT 491
V++A RL D +++ +I GYA + E +L+ M + ++ T
Sbjct: 217 KVDEAR----RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 492 SVI---QCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEM 548
I + CG + R+ +V + TMI + + N L + ++M
Sbjct: 273 GFIRNREMNKACGLFD-----------RMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 304 QQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
++ ++ D+V Y+ ++H G +D A+ ++EEM +G EP YT++ +GR++
Sbjct: 150 EKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVE 209
Query: 364 EAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIP 415
EA E+ + M + P T+ V++ +G+ EE L +F M G P
Sbjct: 210 EATEVYKEMLRSRVSPNCHTYT-VLMEYLVATGKCEEALDIFFKMQEIGVQP 260
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 339 MSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRL 398
+ GF+ + F YT+ F + GRI + M+ +G+ T+ +I + SG +
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTS-LIHWVSSSGDV 173
Query: 399 EECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLL 458
+ + ++E M G P+ +S+ ++ L + VE+A +L P TY++L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 459 IKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLL 518
++ A G+ +E L ++++M+ + P + +I + G+ + L MK +
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Query: 519 TPDVAIYETMIASHEQKGNNARVLQLCNEMASLE 552
I+ + + + G + +L+ N S+E
Sbjct: 294 VLRYPIFVEALETLKAAGESDDLLREVNSHISVE 327
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 78/192 (40%), Gaps = 35/192 (18%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
+++ ++ +MV SG EP+ F G+ +++A+ + M
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS------------- 315
Query: 387 VIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDK 446
V+ C P+ ++D ++ LC A L+ + K
Sbjct: 316 VVYDCE----------------------PNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 447 GFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDA 506
GF+P +Y+ L+ +A GE+ + +K +EM + +++ CR GK ++A
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 507 EKYLKTMKSRLL 518
+ L+ ++ + L
Sbjct: 414 TRLLEMLREKQL 425
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 31/244 (12%)
Query: 330 ALEMYEEM------VMSGFE-PNSFVYTSFTGGFCKEGRIDEAMELMRGM---EGRGLKP 379
A +MY+EM V+S N +Y S F K G++ A+ + R M + +P
Sbjct: 184 AAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRP 243
Query: 380 YGETFDHVIIGCAAGSGR--------LEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENR 431
T+ H++ G G +E +F M+ +G P + + +V+ +
Sbjct: 244 TIRTY-HILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 432 DVEQANANLTRLLDKGFL-----PGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPG 486
V A R+ + + P TY LI G A+G +L EM+ K P
Sbjct: 303 HVNDA----LRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN---NARVLQ 543
+ S++ G+++DA K L M D Y T++ +KG R+L+
Sbjct: 359 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Query: 544 LCNE 547
+ E
Sbjct: 419 MLRE 422
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 194 FNSVLHVLQRSDRVSLVWDVYEHMIRGRNY---PNAVTLKIMIDALCKEGLLQRNVDALD 250
+NS++ ++ ++ +++ HM+ +N P T I+ AL G N ++
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRG----NNSYIN 265
Query: 251 RIMGERKRS---SHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNL 307
+ E RS S I L + KG+++ ++ V L+ Q ++
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVL---------SLHVNDALRIFHQMSV 316
Query: 308 V----PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRID 363
V P+S Y ++H G +A E+ EM GF PN Y S F G ID
Sbjct: 317 VYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEID 376
Query: 364 EAMELMRGMEGRG 376
+A++ + M G
Sbjct: 377 DAVKCLWEMIENG 389
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 344 PNSFVYTSFTG---GFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
P+ F F C+E + +A + ++ + +P +TF+ ++ +G EE
Sbjct: 175 PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILL----SGWKSSEE 229
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIK 460
FE M G G P ++++ +++ C++R++E+A + ++ ++ P TY+ +I
Sbjct: 230 AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 461 GYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTP 520
G G+ + ++ EM+ P ++ + + I+ C +L DA+K + M + L+P
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP 349
Query: 521 DVAIYETMIASHEQKGNNARVLQLCNEMA-SLEL 553
+ Y RVL L N++ S EL
Sbjct: 350 NATTYNLFF----------RVLSLANDLGRSWEL 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 172/445 (38%), Gaps = 61/445 (13%)
Query: 61 LELNDSLVEQVLLELK-DPNDAKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITD 119
+ L+ L+++VL ++ + L F+ +++ F H S +++L R
Sbjct: 67 IHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQ 126
Query: 120 ARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLDLLVQTYAKM-RLTEAAFDV 178
LL K+R + R + L S V+++ K RL FD
Sbjct: 127 IWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQ------TVESFWKFKRLVPDFFDT 180
Query: 179 CCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCK 238
C FN++L L + ++ +VY H ++ + P+ T I++
Sbjct: 181 AC-------------FNALLRTLCQEKSMTDARNVY-HSLKHQFQPDLQTFNILLSGW-- 224
Query: 239 EGLLQRNVDALDRIMGERKRSSHSPSAIVNSSLIL-----RMVEKGHLVEEEGKRERVAV 293
++ + + E K P + +SLI R +EK +
Sbjct: 225 -----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAY------------- 266
Query: 294 MVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFT 353
L+ ++ ++ PD + Y+ ++ +G D A E+ +EM G P+ Y +
Sbjct: 267 ---KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 354 GGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHV--IIGCAAGSGRLEECLGVFEAMLGA 411
FC R+ +A +L+ M +GL P T++ ++ A GR E ++ MLG
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWE---LYVRMLGN 380
Query: 412 GFIP---SCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEV 468
+P SC+ KM ++ + V+ A ++ KGF +L+ +V
Sbjct: 381 ECLPNTQSCMFLIKMFKR---HEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKV 437
Query: 469 QEVLKLYYEMEYKSMCPGLSVFTSV 493
+E K EM K P F +
Sbjct: 438 EEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 305 QNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDE 364
+ L PD V Y+ ++ + ++ A ++ ++M P+ YT+ GG G+ D+
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 365 AMELMRGMEGRGLKPYGETFDHVIIG-CAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKM 423
A E+++ M+ G P ++ I C A RL + + + M+ G P+ +++
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIAR--RLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 424 VEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSM 483
L D+ ++ R+L LP + LIK + +V ++L+ +M K
Sbjct: 358 FRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Query: 484 CPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQ 543
V ++ LC K+E+AEK L M + P ++ + E + V
Sbjct: 418 GSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNN 477
Query: 544 LCNEMA 549
L +MA
Sbjct: 478 LIQKMA 483
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 46/246 (18%)
Query: 327 LDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDH 386
+DSA +++ +V EP Y + G+ + R +EA+ L R M+G+ LKP T
Sbjct: 180 VDSARCVFDRIV----EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS 235
Query: 387 VIIGCA----------------------------------AGSGRLEECLGVFEAMLGAG 412
V+ CA A G L++ + +FE M
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR--- 292
Query: 413 FIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVL 472
++ M+ + E++ R+ + P E T+ L+ + G V+E
Sbjct: 293 -YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 473 KLYYEMEYK-SMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
K + +M K + P + + S++ L R G LEDA +++ + ++P ++ ++A+
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP---ISPTPMLWRILLAA 408
Query: 532 HEQKGN 537
N
Sbjct: 409 CSSHNN 414
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 283 EEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGF 342
E+ GK + V++L+ ++ PD + I+ A GSL +E++ +V SG
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIE----PDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM 513
Query: 343 EPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECL 402
NS V S + K G I+EA ++ R A SG +EE
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR----------------ANVSGTMEE-- 555
Query: 403 GVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGY 462
E M C+S++ ++ E A TR+++ G P + TY+ ++
Sbjct: 556 --LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 463 AAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDV 522
A +++ ++ K + + + ++++ +CG L D+ + M + L D
Sbjct: 614 ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS----RLMFEKSLRRDF 669
Query: 523 AIYETMIASHEQKGNNARVLQLCNEM 548
+ MI + G +QL M
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERM 695
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Query: 308 VPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAME 367
V + V ++ ++ + G A+E+++ M+M EP+ + G ++
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 368 LMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKL 427
+ ++ RG+ + ++ +I A SG + + L VFE + + ++ ++ L
Sbjct: 272 ICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNVV----TWTTIIAGL 326
Query: 428 CENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYK-SMCPG 486
+ +A A R++ G P + T+ ++ + G V +L+ M K + P
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 487 LSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIAS 531
+ + +I L R GKL +A++ +K+M + + AI+ +++A+
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFK---ANAAIWGSLLAA 428
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 43/269 (15%)
Query: 312 VGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSF-----TGGFCKEGRIDEAM 366
V Y+ ++ V G ALEM MV SG E + F Y S T G + G+ A
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 367 ELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM----------LGAGFIPS 416
L R + + FD+ ++ G+ +E +FE M L +G++ S
Sbjct: 312 VLRR-------EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 417 -----------------CLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLI 459
LS+ M+ L EN E+ + + +GF P + +S I
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLT 519
K A G + + ++ LS ++I +CG +E+A + +TM
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL--- 481
Query: 520 PDVAIYETMIASHEQKGNNARVLQLCNEM 548
D + +IA+ Q G+ A + + EM
Sbjct: 482 -DSVSWNALIAALGQHGHGAEAVDVYEEM 509
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 104/277 (37%), Gaps = 54/277 (19%)
Query: 300 KRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKE 359
+ + ++ D V ++ ++ V G + A +++EM E N + G +
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNILSWMIMISGLAEN 395
Query: 360 GRIDEAMELMRGMEGRGLKPYGETFDHVIIGCA--------------------------- 392
G +E ++L M+ G +P F I CA
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 393 -------AGSGRLEECLGVFEAMLGAGFIPSCL---SFDKMVEKLCENRDVEQANANLTR 442
A G +EE VF M CL S++ ++ L ++ +A
Sbjct: 456 NALITMYAKCGVVEEARQVFRTM-------PCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 443 LLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME--YKSMCPGLSVFTSVIQCLCRC 500
+L KG P T ++ + G V + K + ME Y+ + PG + +I LCR
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR-IPPGADHYARLIDLLCRS 567
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
GK DAE ++++ P I+E +++ GN
Sbjct: 568 GKFSDAESVIESLP---FKPTAEIWEALLSGCRVHGN 601
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 314 YSLIVHAKVRL----GSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELM 369
Y L+ +A V + G +DSAL+++E M+ E + +T+ G G DEA++L
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFEGMI----EKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 370 RGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDK-MVEKLC 428
M G+ P + ++ +A LE V + +GF PS LS + +V
Sbjct: 419 CNMRVGGITP-DKIVTASVLSASAELTLLEFGQQVHGNYIKSGF-PSSLSVNNSLVTMYT 476
Query: 429 ENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEME-YKSMCPGL 487
+ +E AN + + + T++ LI GYA G +++ + + M + PG
Sbjct: 477 KCGSLEDANVIFNSMEIRDLI----TWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP 532
Query: 488 SVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
+ +I R G E+ L M+ + PD +++ ++A+ + GN
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQME---VEPDATVWKAILAASRKHGN 579
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 281 LVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMS 340
L+ K ER AV L +++L+++++P+ + I+ + LGSL ++ M+ +
Sbjct: 283 LISGFAKCER-AVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 341 GFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE 400
G E ++ +TSF + + G I A + M R + + + I +G EE
Sbjct: 342 GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI-----NGLFEE 396
Query: 401 CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLL-DKGFLPGETTYSLLI 459
L F M +P+ ++F ++ + +V++ + D G +P E Y+ ++
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 460 KGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED-----AEKYL 510
GE+ E M K M S CR K D AEK L
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA----CRIHKEVDLAGEIAEKLL 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 318 VHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGL 377
++ K RL LD+A +++E V + N ++T+ GF K R EA +L R M +
Sbjct: 255 MYVKCRL--LDNARKLFETSV----DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 378 KPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQAN 437
P T +++ C++ G L V M+ G ++F ++ +++ A
Sbjct: 309 LPNQCTLAAILVSCSS-LGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 438 ANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCL 497
+ ++ + ++S +I + G +E L +++M+ +++ P F S++
Sbjct: 368 TVFDMMPERNVI----SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 498 CRCGKLEDAEKYLKTM-KSRLLTPDVAIYETMI 529
G +++ K ++M + + P+ Y M+
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 32/275 (11%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
++L + +L+ PD+ + I+ + L S +++ + G E FV T+
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSG---------RLEECLGVFE 406
+CK G + +A ++ E ++ +I G A S R++E +
Sbjct: 98 YCKCGLVADARKVFE--ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 407 AMLGAGFIPSC-----LSFDKMVEKLCE----NRDVEQANANLT------------RLLD 445
++ G +P C L + + C + +V N+ +T RL D
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 446 KGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRCGKLED 505
+ + G T++ +I GY+ G +VL+LY +M+ +CP SV+ G +
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 506 AEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNAR 540
+ K ++S P+V + I+ + + GN A+
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 309 PDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMEL 368
PD V ++ ++ V+ G +D AL ++ +M E N+ +T+ G+ + EA++L
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNKEALQL 234
Query: 369 MRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAM----LGAGFIPSCLSFDKMV 424
M+ ++P + + + CA G LE+ + + + + C+ D M
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQ-LGALEQGKWIHSYLNKTRIRMDSVLGCVLID-MY 292
Query: 425 EKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMC 484
K E + + N+ + ++ LI GYA G +E + + EM+ +
Sbjct: 293 AKCGEMEEALEVFKNIKK-------KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIK 345
Query: 485 PGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRL-LTPDVAIYETMI 529
P + FT+V+ G +E+ + +M+ L P + Y ++
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 117/277 (42%), Gaps = 44/277 (15%)
Query: 296 VTLLKRLLQQNLVPDSVGYSLIVHAKVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGG 355
+ L K+++ + DS +S + + L S+ +++ ++ SGF + V S
Sbjct: 180 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 356 FCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEECLGVFEAMLGAGF-- 413
+ K R+D A ++ M R + + + II +G E+ L VF ML +G
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISW-----NSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 414 ----------------------------IPSCLS-----FDKMVEKLCENRDVEQANANL 440
+ +C S + +++ + D++ A A
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 441 TRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEYKSMCPGLSVFTSVIQCLCRC 500
+ D+ + +Y+ +I GYA +G E +KL+ EME + + P + T+V+ C R
Sbjct: 355 REMSDRSVV----SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 501 GKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGN 537
L++ ++ + +K L D+ + ++ + + G+
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447