Miyakogusa Predicted Gene

Lj0g3v0273379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273379.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.15,0,no
description,NULL; AAA_2,ATPase, AAA-2; ClpB_D2-small,Clp ATPase,
C-terminal; clpX: ATP-dependent ,CUFF.18118.1
         (786 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G33360.1 | Symbols:  | ATP-dependent Clp protease | chr1:1209...   717   0.0  
AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X ...   634   0.0  
AT5G49840.1 | Symbols:  | ATP-dependent Clp protease | chr5:2025...   563   e-160

>AT1G33360.1 | Symbols:  | ATP-dependent Clp protease |
           chr1:12092111-12095789 FORWARD LENGTH=656
          Length = 656

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/671 (58%), Positives = 453/671 (67%), Gaps = 63/671 (9%)

Query: 111 RPISTHLNHFIVSGGAHRRRESLVGVQERYKWDRGGS----DDGSTHNTTRKIRAEANCP 166
           R IS   N + +  G+  RR     +QER+K ++GG     DD     T RK+RAE NCP
Sbjct: 18  RSISPVSNLYSLELGSCPRRR----IQERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCP 73

Query: 167 RCTKDMNLIFSNRHFPATSDSDCXXXXXXXXXXXXXXXXXYQAVNLCPSCNTAYYFRPNN 226
           RC+K M+L+FSNR FP+   S+                  +Q+VN CP+C TAY F P  
Sbjct: 74  RCSKQMDLLFSNRQFPS---SNLLQRPDDSDSSGAGDKTNFQSVNFCPTCKTAYGFNPRG 130

Query: 227 TTPLQGTFVEIGRVSTNNGSYNSVIGNPNXXXXXXXXXXXXXXXXXXXXXXXHVGEDAGL 286
            +PLQGTF+EIGRV +   +  +                                +D   
Sbjct: 131 VSPLQGTFIEIGRVQSPTTTTTNA------------------TTSKSTRKQQQHSKDPNQ 172

Query: 287 RGLASNWLEVSFWDTLKNGGANGNHXXXXXXXXXXXXXXK------NGNGLAVHTPPGPP 340
                N L  SFWDTL++ GA                         N +  AV T P P 
Sbjct: 173 GFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVNASPSAVDTSPLPD 232

Query: 341 FAPDINVIRAXXXXXXXXXXXXXXXXXXXXXXXSNLGKDLPSPKEICKGLDKFVIGQDRA 400
              D++                           + LG+D P+PKEICK LDKFVIGQ RA
Sbjct: 233 AVNDVS-----------------------RWGGAGLGRDFPTPKEICKWLDKFVIGQSRA 269

Query: 401 KKVLSVAVYNHYKRIYHATLPKGSVADAGTSQALDDDENVELEKSNVLLMGPTGSGKTLL 460
           KKVLSVAVYNHYKRIYH ++ KGS A     Q +DDD+NVEL+KSNVLLMGPTGSGKTLL
Sbjct: 270 KKVLSVAVYNHYKRIYHTSMKKGSAA-----QPIDDDDNVELDKSNVLLMGPTGSGKTLL 324

Query: 461 AKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLXXXXXXXXXXQQGIIYIDEVDK 520
           AKTLAR VNVPFVIADATTLTQAGYVG+DVESILHKLL          QQGI+YIDEVDK
Sbjct: 325 AKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDK 384

Query: 521 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQMDTKNILFICG 580
           ITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPRG++IQ+DTK+ILFICG
Sbjct: 385 ITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICG 444

Query: 581 GAFIDLEKTISERRQDSSIGFGAPVRANMRTGRIVDSAVTSSLLETVESADLIAYGLIPE 640
           GAF+DLEKTI +RRQDSSIGFGAPVRANM T  +   A+TSSLLE+VESADL AYGLIPE
Sbjct: 445 GAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTAYGLIPE 504

Query: 641 FIGRFPILVSLSALTEDQLMQVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRLIAEKAM 700
           F+GRFPILVSLSALTEDQL++VL EPKNALGKQYKKLFSMNNVKLHFTEKAL +I+++AM
Sbjct: 505 FVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAM 564

Query: 701 AKNTGARGLRALIESILTESMFEIPDIKTGSDRVDAVVVDEESVGSLNAPGCGGKILRGD 760
            KNTGARGLRAL+ESILTE+MFEIPD K G +R+DAV+VDEES  S  + GC  KILRGD
Sbjct: 565 VKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTAKILRGD 624

Query: 761 GALEQYLAKMK 771
           GA E+YL++ K
Sbjct: 625 GAFERYLSENK 635


>AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X |
           chr5:21644060-21647503 FORWARD LENGTH=579
          Length = 579

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/403 (77%), Positives = 352/403 (87%), Gaps = 3/403 (0%)

Query: 374 SNLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLPKGSVADAGTSQA 433
           SNLG D P+PKEICKGL+KFVIGQ+RAKKVLSVAVYNHYKRIYH +  K S  +  ++ A
Sbjct: 152 SNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAA 211

Query: 434 L-DDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 492
              DD+ VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES
Sbjct: 212 KPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 271

Query: 493 ILHKLLXXXXXXXXXXQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 552
           IL+KLL          QQGI+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV
Sbjct: 272 ILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 331

Query: 553 NVPEKGARKHPRGENIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTG 612
           NVPEKGARKHPRG+NIQ+DTK+ILFICGGAF+D+EKTISERR DSSIGFGAPVRANMR G
Sbjct: 332 NVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAG 391

Query: 613 RIVDSAVTSSLLETVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMQVLTEPKNALGK 672
            + ++AV S+L+ETVES+DLIAYGLIPEF+GRFP+LVSLSALTE+QLMQVLTEPKNALGK
Sbjct: 392 GVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGK 451

Query: 673 QYKKLFSMNNVKLHFTEKALRLIAEKAMAKNTGARGLRALIESILTESMFEIPDIKTGSD 732
           QYKK++ MN+VKLHFTE ALRLIA KA+ KNTGARGLRAL+ESIL +SM+EIPD  TGSD
Sbjct: 452 QYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSD 511

Query: 733 RVDAVVVDEESVGSLNAPGCGGKILRGDGALEQYLAKM--KDS 773
            ++AVVVDEE+V      G G KILRG GAL +YL++   KDS
Sbjct: 512 MIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSETNSKDS 554


>AT5G49840.1 | Symbols:  | ATP-dependent Clp protease |
           chr5:20255243-20259035 FORWARD LENGTH=608
          Length = 608

 Score =  563 bits (1451), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/392 (70%), Positives = 333/392 (84%), Gaps = 4/392 (1%)

Query: 380 LPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLPKGSVADAGTSQALDDD-E 438
           LP+PKEIC+GLD+FVIGQ++AKKVLSVAVYNHYKRIYHA+  KGS +++      DD+ +
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256

Query: 439 NVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLL 498
           +VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESIL+KL 
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 316

Query: 499 XXXXXXXXXXQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--E 556
                     Q+GI+YIDEVDK+T K+ S N  RDVSGEGVQQ+LLK+LEGT+V+VP  E
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376

Query: 557 KGARKHPRGENIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGRIVD 616
           KG R+ PRG++IQMDTK+ILFICGGAFIDLEKT+SER+ D+SIGFGA VR NM T  +  
Sbjct: 377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436

Query: 617 SAVTSSLLETVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMQVLTEPKNALGKQYKK 676
           +AVTSSLLE+++S DL+AYGLIPEF+GR PILVSLSAL EDQL+QVLTEPK+ALGKQYKK
Sbjct: 437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 496

Query: 677 LFSMNNVKLHFTEKALRLIAEKAMAKNTGARGLRALIESILTESMFEIPD-IKTGSDRVD 735
           LF MNNV+L FTE A RLIA KAM+KNTGARGLR+++ESILTE+MFE+PD I  GS  + 
Sbjct: 497 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIK 556

Query: 736 AVVVDEESVGSLNAPGCGGKILRGDGALEQYL 767
           AV+VDEE+VGS+ +PGCG KIL+GD  L+Q++
Sbjct: 557 AVLVDEEAVGSVGSPGCGAKILKGDNVLQQFV 588



 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 16/82 (19%)

Query: 159 IRAEANCPRCTKDMNLIFSNRHFPATSDSDCXXXXXXXXXXXXXXXXXYQAVNLCPSCNT 218
           IR++ NCPRC+  M++IFSNR    T+                     YQAVN C  C T
Sbjct: 77  IRSDVNCPRCSAQMHVIFSNRPLSLTA----------------REPGIYQAVNFCSQCKT 120

Query: 219 AYYFRPNNTTPLQGTFVEIGRV 240
           A+YFRP   +PLQG+F+E+G+V
Sbjct: 121 AFYFRPFKLSPLQGSFIELGKV 142