Miyakogusa Predicted Gene
- Lj0g3v0273279.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0273279.1 Non Chatacterized Hit- tr|B9RDP2|B9RDP2_RICCO
Dead box ATP-dependent RNA helicase, putative
OS=Ricin,87.68,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase, C-termina,CUFF.18207.1
(480 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 766 0.0
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 766 0.0
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 736 0.0
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 717 0.0
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 717 0.0
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 285 5e-77
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 283 2e-76
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 282 3e-76
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 282 3e-76
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 281 5e-76
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 278 8e-75
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 274 8e-74
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 270 1e-72
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 269 4e-72
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 251 7e-67
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 251 7e-67
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 232 4e-61
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 220 2e-57
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 219 3e-57
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 214 8e-56
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 213 3e-55
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 213 3e-55
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 213 3e-55
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 213 3e-55
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 212 5e-55
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 212 5e-55
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 211 1e-54
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 209 3e-54
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 3e-54
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 208 7e-54
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 207 1e-53
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 199 2e-51
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 198 8e-51
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 197 1e-50
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 197 2e-50
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 196 3e-50
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 194 9e-50
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 192 5e-49
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 190 2e-48
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 190 2e-48
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 3e-48
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 189 4e-48
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 188 7e-48
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 188 7e-48
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 188 7e-48
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 188 8e-48
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 187 1e-47
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 185 6e-47
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 183 2e-46
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 183 3e-46
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 182 3e-46
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 182 3e-46
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 179 3e-45
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 179 3e-45
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 178 9e-45
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 177 2e-44
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 174 1e-43
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 171 7e-43
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 2e-42
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 168 8e-42
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 164 1e-40
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 160 2e-39
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 160 2e-39
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 158 1e-38
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 157 2e-38
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 154 1e-37
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 154 2e-37
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 149 3e-36
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 147 2e-35
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 145 5e-35
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 139 6e-33
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 135 5e-32
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 131 1e-30
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 122 4e-28
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 113 2e-25
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 103 3e-22
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 77 3e-14
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 74 3e-13
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 65 9e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 61 2e-09
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 60 4e-09
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 54 2e-07
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 54 2e-07
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 51 2e-06
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 50 3e-06
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/401 (92%), Positives = 382/401 (95%), Gaps = 3/401 (0%)
Query: 83 AESNGD---EVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKR 139
SNGD EVEKTVQSE +D +S+DWKARLK+P DTRY+TEDVTATKGNEFEDYFLKR
Sbjct: 81 GNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDYFLKR 140
Query: 140 ELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
ELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGTGKTAAFCIP LEK+DQDNNVI
Sbjct: 141 ELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVI 200
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q VI+VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI
Sbjct: 201 QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 260
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKD 319
LDL KKGVCVLKDCS+LVMDEADKLLS EFQPS++ LI FLP +RQILMFSATFPVTVKD
Sbjct: 261 LDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKD 320
Query: 320 FKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 379
FKDRFL PYVINLMDELTLKGITQFYAFVEERQK+HCLNTLFSKLQINQSIIFCNSVNR
Sbjct: 321 FKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNR 380
Query: 380 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 439
VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV
Sbjct: 381 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 440
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY
Sbjct: 441 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 481
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/401 (92%), Positives = 382/401 (95%), Gaps = 3/401 (0%)
Query: 83 AESNGD---EVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKR 139
SNGD EVEKTVQSE +D +S+DWKARLK+P DTRY+TEDVTATKGNEFEDYFLKR
Sbjct: 81 GNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDYFLKR 140
Query: 140 ELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
ELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGTGKTAAFCIP LEK+DQDNNVI
Sbjct: 141 ELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVI 200
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q VI+VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI
Sbjct: 201 QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 260
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKD 319
LDL KKGVCVLKDCS+LVMDEADKLLS EFQPS++ LI FLP +RQILMFSATFPVTVKD
Sbjct: 261 LDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKD 320
Query: 320 FKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 379
FKDRFL PYVINLMDELTLKGITQFYAFVEERQK+HCLNTLFSKLQINQSIIFCNSVNR
Sbjct: 321 FKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNR 380
Query: 380 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 439
VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV
Sbjct: 381 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 440
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY
Sbjct: 441 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 481
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/394 (88%), Positives = 377/394 (95%), Gaps = 1/394 (0%)
Query: 88 DEVEKTVQSEAV-DSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKRELLMGIY 146
DEVEKTVQSEA+ DS+++DWKA LK+PP D RY+TEDVTATKGNEFEDYFLKR+LL GIY
Sbjct: 111 DEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLRGIY 170
Query: 147 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVP 206
EKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK+D +NNVIQ VILVP
Sbjct: 171 EKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVP 230
Query: 207 TRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG 266
TRELALQTSQVCKEL K+LKI+VMVTTGGTSL+DDIMRLYQPVHLLVGTPGRILDLAKKG
Sbjct: 231 TRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKG 290
Query: 267 VCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLH 326
VCVLKDC+MLVMDEADKLLS EFQPSI++LIQFLP +RQILMFSATFPVTVK FKDR+L
Sbjct: 291 VCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLK 350
Query: 327 KPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK 386
KPY+INLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK
Sbjct: 351 KPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK 410
Query: 387 ITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 446
ITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+
Sbjct: 411 ITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPR 470
Query: 447 NAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
+E+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y
Sbjct: 471 TSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMY 504
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/401 (84%), Positives = 372/401 (92%), Gaps = 1/401 (0%)
Query: 81 GPAESNGDEVEKTVQSEAV-DSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKR 139
G A + + V++T Q EA D++ QDWKA L++PP DTRY+T DVTATKGNEFEDYFLKR
Sbjct: 74 GNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKR 133
Query: 140 ELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK+D +NNVI
Sbjct: 134 DLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVI 193
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q +ILVPTRELALQTSQVCKEL K+L IQVMVTTGGTSL+DDIMRL+QPVHLLVGTPGRI
Sbjct: 194 QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI 253
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKD 319
LDL KKGVCVLKDC+MLVMDEADKLLS EFQPS+++LIQFLP+NRQ LMFSATFPVTVK
Sbjct: 254 LDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKA 313
Query: 320 FKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 379
FKDR L KPYVINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR
Sbjct: 314 FKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 373
Query: 380 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 439
VELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGIDIQAVNVV
Sbjct: 374 VELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVV 433
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
INFDFP+ +E+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y
Sbjct: 434 INFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMY 474
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/401 (84%), Positives = 372/401 (92%), Gaps = 1/401 (0%)
Query: 81 GPAESNGDEVEKTVQSEAV-DSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKR 139
G A + + V++T Q EA D++ QDWKA L++PP DTRY+T DVTATKGNEFEDYFLKR
Sbjct: 74 GNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKR 133
Query: 140 ELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEK+D +NNVI
Sbjct: 134 DLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVI 193
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q +ILVPTRELALQTSQVCKEL K+L IQVMVTTGGTSL+DDIMRL+QPVHLLVGTPGRI
Sbjct: 194 QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI 253
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKD 319
LDL KKGVCVLKDC+MLVMDEADKLLS EFQPS+++LIQFLP+NRQ LMFSATFPVTVK
Sbjct: 254 LDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKA 313
Query: 320 FKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 379
FKDR L KPYVINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR
Sbjct: 314 FKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 373
Query: 380 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 439
VELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGIDIQAVNVV
Sbjct: 374 VELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVV 433
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
INFDFP+ +E+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y
Sbjct: 434 INFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMY 474
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 219/346 (63%), Gaps = 2/346 (0%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F D +K ++L G+YE GFE+PS IQ+ ++ L G D++A+A++GTGKT+ + +
Sbjct: 37 FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96
Query: 192 VDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 251
VD + +Q +IL PTRELA QT + + +G H IQ GG S+ +DI +L VH+
Sbjct: 97 VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHV 156
Query: 252 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSA 311
+ GTPGR+ D+ K+ + +L++DE+D++LS F+ I + ++LP + Q+ + SA
Sbjct: 157 VSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSA 216
Query: 312 TFPVTVKDFKDRFLHKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 369
T P + + +F+ +P I + DELTL+GI QF+ VE E K L L+ L I Q
Sbjct: 217 TLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQ 276
Query: 370 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 429
++IFCN+ +V+ L++K+ ++ +H M Q R+ + ++FR+G R L+ TD++ R
Sbjct: 277 AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWAR 336
Query: 430 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
GID+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N + +D
Sbjct: 337 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 382
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 214/351 (60%), Gaps = 2/351 (0%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 192 VDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 251
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 101 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 252 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSA 311
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q LP Q+ +FSA
Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
Query: 312 TFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 369
T P + +F+ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 280
Query: 370 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 429
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 430 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
GID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D L+
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 213/348 (61%), Gaps = 2/348 (0%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
+ F+ L+ +LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L
Sbjct: 41 DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100
Query: 190 EKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 249
+++D Q ++L PTRELA Q +V + LG +L ++ GGTS+++D L V
Sbjct: 101 QQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGV 160
Query: 250 HLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMF 309
H++VGTPGR+ DL ++ M V+DEAD++LS F+ I + Q LP Q+ +F
Sbjct: 161 HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 220
Query: 310 SATFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 367
SAT P + +F++KP I + DELTL+GI QFY V+ E K+ L L+ L I
Sbjct: 221 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 280
Query: 368 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 427
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 281 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340
Query: 428 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
RGID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T ED
Sbjct: 341 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSED 388
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 214/351 (60%), Gaps = 2/351 (0%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 31 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 90
Query: 192 VDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 251
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 91 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 150
Query: 252 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSA 311
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q LP Q+ +FSA
Sbjct: 151 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 210
Query: 312 TFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 369
T P + +F+ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 211 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 270
Query: 370 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 429
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 271 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 330
Query: 430 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
GID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D L+
Sbjct: 331 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 381
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 212/346 (61%), Gaps = 2/346 (0%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 192 VDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 251
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 101 LDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 252 LVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSA 311
+VGTPGR+ D+ K+ + M V+DEAD++LS F+ I + Q LP Q+ +FSA
Sbjct: 161 VVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
Query: 312 TFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 369
T P + +F+ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 221 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ 280
Query: 370 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 429
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
Query: 430 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
GID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D
Sbjct: 341 GIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 216/352 (61%), Gaps = 4/352 (1%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 100
Query: 192 VDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 251
+D Q ++L PTRELA Q +V + LG + ++V GGTS+++D L VH+
Sbjct: 101 LDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHV 160
Query: 252 LVGTPGRILDLAKKGVCVLKDC-SMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFS 310
+VGTPGR+ D+ ++ + DC M V+DEAD++LS F+ I + Q LP Q+ +FS
Sbjct: 161 VVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
Query: 311 ATFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQIN 368
AT P + +F+ KP I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279
Query: 369 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 428
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Query: 429 RGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
RGID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D+ L+
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLF 391
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 210/343 (61%), Gaps = 5/343 (1%)
Query: 143 MGIYE---KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
MG+ E +GFE+PS IQ+ I G D++ +A++GTGKTA FC L+++D
Sbjct: 44 MGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQC 103
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+
Sbjct: 104 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 163
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKD 319
D+ K+ + M V+DEAD++LS F+ I + Q LP Q+ +FSAT P +
Sbjct: 164 FDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALE 223
Query: 320 FKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSV 377
+F+ KP I + DELTL+GI QFY VE E K+ L L+ L I QS+IF N+
Sbjct: 224 ITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTR 283
Query: 378 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 437
+V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V+
Sbjct: 284 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 343
Query: 438 VVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
+VINFD P E YLHR+GRSGRFG G+A+N +T +D L+
Sbjct: 344 LVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 386
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 219/360 (60%), Gaps = 6/360 (1%)
Query: 126 ATKG----NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 181
TKG F+D + ++L G+Y+ G+++PS IQ+ ++ L G D++A+A++GTGKT
Sbjct: 14 TTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKT 73
Query: 182 AAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 241
+ I + V+ + +QV++L P+RELA QT + + +G H IQ GG S+ +D
Sbjct: 74 SMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGED 133
Query: 242 IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLP 301
I +L + VH + GTPGR+ D+ K+G K +LV+DE+D++LS + I + + LP
Sbjct: 134 IKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALP 193
Query: 302 RNRQILMFSATFPVTVKDFKDRFLHKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLN 359
+ Q+ + SAT P + + ++F+ P I + DELTL+GI Q+Y V+ E K L
Sbjct: 194 HDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 360 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 419
L+ +L INQ+IIFCN+ +V+ L +K+ + +H Q R+ + + FR+ R
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 420 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 479
L+ +D++ RGID+Q V+ VIN+D P N E Y+HR+GR+GRFG G+A+N + D +L
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 212/344 (61%), Gaps = 7/344 (2%)
Query: 143 MGIYE---KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI 199
MG+ E +GFE+PS IQ+ I G D++ +A++GTGKTA FC L+++D
Sbjct: 44 MGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQC 103
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
Q ++L PTRELA Q +V + LG + ++V GGTS+++D L VH++VGTPGR+
Sbjct: 104 QALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRV 163
Query: 260 LDLAKKGVCVLKDC-SMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVK 318
D+ ++ + DC M V+DEAD++LS F+ I + Q LP Q+ +FSAT P
Sbjct: 164 FDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEAL 222
Query: 319 DFKDRFLHKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNS 376
+ +F+ KP I + DELTL+GI QFY VE E K+ L L+ L I QS+IF N+
Sbjct: 223 EITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNT 282
Query: 377 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 436
+V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V
Sbjct: 283 RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQV 342
Query: 437 NVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
++VINFD P E YLHR+GRSGRFG G+A+N +T +D+ L+
Sbjct: 343 SLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLF 386
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 11/372 (2%)
Query: 111 KIPPADTRYKTEDV----TATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 166
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 167 GSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 225
G D++ +AK+G GKTA F + L++++ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 226 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADK 283
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 284 LL-SPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDE--LTLK 340
+L S + + +Q++ + P ++Q++MFSAT ++ +F+ P I + DE LTL
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 341 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 400
G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 262 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
Query: 401 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 460
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR
Sbjct: 322 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 461 FGHLGLAVNLIT 472
FG GLA+ +
Sbjct: 382 FGTKGLAITFVA 393
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 11/372 (2%)
Query: 111 KIPPADTRYKTEDV----TATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 166
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 167 GSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 225
G D++ +AK+G GKTA F + L++++ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 226 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADK 283
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 284 LL-SPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDE--LTLK 340
+L S + + +Q++ + P ++Q++MFSAT ++ +F+ P I + DE LTL
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 341 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 400
G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 262 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
Query: 401 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 460
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR
Sbjct: 322 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 461 FGHLGLAVNLIT 472
FG GLA+ +
Sbjct: 382 FGTKGLAITFVA 393
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 217/413 (52%), Gaps = 52/413 (12%)
Query: 111 KIPPADTRYKTEDV----TATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 166
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 167 GSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 225
G D++ +AK+G GKTA F + L++++ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 226 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADK 283
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 284 LL-SPEFQPSIQQLIQFLPRNRQILMFSATF-----PVTVKDFKD--------------- 322
+L S + + +Q++ + P ++Q++MFSAT PV K +D
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWV 261
Query: 323 ----------RF------LHKPYVINLMD-------ELTLKGITQFYAFVEERQKVHCLN 359
RF L+ P I+ M+ +LTL G+ Q Y + E +K LN
Sbjct: 262 GFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLN 321
Query: 360 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 419
L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R
Sbjct: 322 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 381
Query: 420 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 472
LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG GLA+ +
Sbjct: 382 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 434
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 200/376 (53%), Gaps = 15/376 (3%)
Query: 114 PADTRYKTEDVTATKGN------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 167
P + K +VT T N FE L E+L + GF P+PIQ ++ PIAL
Sbjct: 413 PVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQS 472
Query: 168 SDILARAKNGTGKTAAFCIPA---LEKVDQDN-NVIQVVILVPTRELALQTSQVCKELGK 223
DI+A AK G+GKT + IPA L D+ N V+IL PTRELA Q G+
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGR 532
Query: 224 HLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADK 283
+I GG + L + ++V TPGR+ D+ + + + S+LV+DEAD+
Sbjct: 533 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADR 592
Query: 284 LLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-K 340
+L F+P I++++ +P RQ LM++AT+P V+ L P +N+ +DEL K
Sbjct: 593 MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652
Query: 341 GITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 399
ITQ+ V + +K L + S+ + ++ IIFC++ + LA+ + + IH
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHG 711
Query: 400 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 459
Q R+ V + FR+G L+ TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+G
Sbjct: 712 DKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 771
Query: 460 RFGHLGLAVNLITYED 475
R G G+A T +D
Sbjct: 772 RAGATGVAFTFFTEQD 787
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 192/352 (54%), Gaps = 9/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 188
FE L ELL +Y GF PSPIQ +S PIA+ DI+A AK G+GKT + IP
Sbjct: 163 FEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH 222
Query: 189 LEKVDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
L+++ D+ + +++L PTRELA Q + GK KI GG + + +
Sbjct: 223 LQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIER 282
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
V ++V TPGR+ D+ + L S LV+DEAD++L F+P I++++ +P RQ L
Sbjct: 283 GVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTL 342
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 363
M++AT+P V+ L P +N+ +DEL K ITQ + +K L + S
Sbjct: 343 MYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRS 402
Query: 364 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ ++ IIFC++ + LA+ +T + IH Q R+ V + FR+G LV
Sbjct: 403 QEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVA 461
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RG+D++ + VV+N+DFP E Y+HR+GR+GR G GLA +D
Sbjct: 462 TDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQD 513
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 17/373 (4%)
Query: 119 YKTEDVTATKGNE-------FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDIL 171
Y+TE + +G + F+D +L I + GF P+PIQ + P+AL G D++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 172 ARAKNGTGKTAAFCIPAL------EKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL 225
A+ G+GKT A+ +PAL ++ QD+ I V+IL PTRELA+Q + ++ G
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS 265
Query: 226 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL 285
++ GG I L + V +++ TPGR++D+ + LK + LV+DEAD++L
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 286 SPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY--VINLMDELTLKGIT 343
F+P I++++ + +RQ L++SAT+P V+ +FL PY +I D + I
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSIN 385
Query: 344 QFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKML 402
Q V +K + L TL +L I IF + + + +++ G+ IH
Sbjct: 386 QVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKT 445
Query: 403 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFG 462
Q R+RV +F++G + TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G
Sbjct: 446 QSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAG 505
Query: 463 HLGLAVNLITYED 475
G+A T+++
Sbjct: 506 AKGMAFTFFTHDN 518
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 9/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 188
FE ELL + GF P+PIQ +S PIA+ G DI+A AK G+GKT + IP
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 189 LEKVDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
L+++ D+ + +++L PTRELA Q + + G+ +I GG + L +
Sbjct: 220 LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 279
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
++V TPGR+ D+ + L+ S LV+DEAD++L F+P I+++++ +P RQ L
Sbjct: 280 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 339
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 363
M++AT+P V+ L P +N+ +DEL K ITQ V +K L + S
Sbjct: 340 MYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS 399
Query: 364 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ ++ IIFC++ + L + +T + IH Q R+ V + FR+G LV
Sbjct: 400 QEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G A +D
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 9/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 188
FE ELL + GF P+PIQ +S PIA+ G DI+A AK G+GKT + IP
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 189 LEKVDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
L+++ D+ + +++L PTRELA Q + + G+ +I GG + L +
Sbjct: 220 LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 279
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
++V TPGR+ D+ + L+ S LV+DEAD++L F+P I+++++ +P RQ L
Sbjct: 280 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 339
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 363
M++AT+P V+ L P +N+ +DEL K ITQ V +K L + S
Sbjct: 340 MYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS 399
Query: 364 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ ++ IIFC++ + L + +T + IH Q R+ V + FR+G LV
Sbjct: 400 QEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G A +D
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 9/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 188
FE ELL + GF P+PIQ +S PIA+ G DI+A AK G+GKT + IP
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 189 LEKVDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
L+++ D+ + +++L PTRELA Q + + G+ +I GG + L +
Sbjct: 220 LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 279
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
++V TPGR+ D+ + L+ S LV+DEAD++L F+P I+++++ +P RQ L
Sbjct: 280 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 339
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 363
M++AT+P V+ L P +N+ +DEL K ITQ V +K L + S
Sbjct: 340 MYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS 399
Query: 364 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ ++ IIFC++ + L + +T + IH Q R+ V + FR+G LV
Sbjct: 400 QEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G A +D
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 190/352 (53%), Gaps = 9/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA--- 188
FE ELL + GF P+PIQ +S PIA+ G DI+A AK G+GKT + IP
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 189 LEKVDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
L+++ D+ + +++L PTRELA Q + + G+ +I GG + L +
Sbjct: 220 LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 279
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
++V TPGR+ D+ + L+ S LV+DEAD++L F+P I+++++ +P RQ L
Sbjct: 280 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 339
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-S 363
M++AT+P V+ L P +N+ +DEL K ITQ V +K L + S
Sbjct: 340 MYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS 399
Query: 364 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ ++ IIFC++ + L + +T + IH Q R+ V + FR+G LV
Sbjct: 400 QEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G A +D
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 181/310 (58%), Gaps = 7/310 (2%)
Query: 169 DILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-KI 227
D++ +AK+G GKTA F + L++++ + ++L TRELA Q +L
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 61
Query: 228 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL 285
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK+L
Sbjct: 62 KVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 286 -SPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDE--LTLKGI 342
S + + +Q++ + P ++Q++MFSAT ++ +F+ P I + DE LTL G+
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 343 TQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML 402
Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240
Query: 403 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFG 462
Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 463 HLGLAVNLIT 472
GLA+ +
Sbjct: 301 TKGLAITFVA 310
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 192/354 (54%), Gaps = 14/354 (3%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE- 190
F + ++ EL+ G++ PS IQ E++P AL G D++ A+ G+GKT AF IP L+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 191 -----------KVDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
K + + +L PTRELA+Q ++ + LG + ++ V GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 240 DDIMRLYQPVHLLVGTPGRILD-LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQ 298
+ L + H++V TPGR+ D ++ LK LV+DEAD+LL+ +F+ S+ Q+++
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190
Query: 299 FLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL-TLKGITQFYAFVEERQKVHC 357
+P R+ +FSAT V+ + L P I + T+ + Q Y FV + K
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCY 250
Query: 358 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 417
L + S++ + S+IF + + LA + LG+ I +M Q R + F+ G
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGE 310
Query: 418 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLI 471
C LVCTD+ +RG+DI +V+VVIN+D P N++ Y+HRVGR+ R G G+ ++L+
Sbjct: 311 CNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 9/339 (2%)
Query: 145 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKVDQDNNV-IQ 200
+Y GF PSPIQ +S PIA+ DI+A AK G+GKT + IP L+++ D+ +
Sbjct: 244 VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPT 303
Query: 201 VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL 260
+++L PTRELA Q + GK KI GG + + + V ++V TPGR+
Sbjct: 304 ILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLN 363
Query: 261 DLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDF 320
D+ + L S LV+DEAD++L F+P I++++ +P RQ LM++AT+P V+
Sbjct: 364 DILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKI 423
Query: 321 KDRFLHKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNS 376
L P +N+ +DEL K ITQ + +K L + S+ ++ IIFC++
Sbjct: 424 AADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCST 483
Query: 377 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 436
+ LA+ +T + IH Q R+ V + FR+G LV TD+ RG+D++ +
Sbjct: 484 KRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDI 542
Query: 437 NVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
VV+N+DFP E Y+HR+GR+GR G GLA +D
Sbjct: 543 RVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQD 581
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 206/433 (47%), Gaps = 74/433 (17%)
Query: 111 KIPPADTRYKTEDV----TATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 166
K+P + + E V + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 23 KVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
Query: 167 GSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL- 225
G D++ +AK+G GKTA F + L++++ + ++L TRELA Q +L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 142
Query: 226 KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADK 283
+V V GG ++K D+++ P H++VGTPGR+L LA++ LK+ ++DE DK
Sbjct: 143 DTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDK 201
Query: 284 LL-----------------------------SPEFQPSIQQLIQFLPRN----------- 303
+L S E +P ++ +Q N
Sbjct: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFG 261
Query: 304 ----------------------RQILMFSATFPVTVKDFKDRFLHKPYVINLMDE--LTL 339
R ILMF + + + R P I + DE LTL
Sbjct: 262 VENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRI--SPMEIYVDDEAKLTL 319
Query: 340 KGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 399
G+ Q Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 320 HGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 379
Query: 400 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 459
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+G
Sbjct: 380 GMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 439
Query: 460 RFGHLGLAVNLIT 472
RFG GLA+ +
Sbjct: 440 RFGTKGLAITFVA 452
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 185/349 (53%), Gaps = 13/349 (3%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F DY L+ + + GF P+PIQ + P+A+ G D++ A+ G+GKT ++ +PA+
Sbjct: 106 FPDYVLEE-----VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVH 160
Query: 192 VDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 246
V+ + V++L PTRELA+Q Q + G KI+ GG + L
Sbjct: 161 VNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQ 220
Query: 247 QPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQI 306
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I++++ + +RQ
Sbjct: 221 KGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQT 280
Query: 307 LMFSATFPVTVKDFKDRFLHKPY--VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSK 364
L +SAT+P V+ +FL+ PY +I D + I Q + E QK + L L
Sbjct: 281 LYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLED 340
Query: 365 LQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ I +F ++ + + +++ G+ IH Q R+ V +FR+G +
Sbjct: 341 IMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTA 400
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 472
TD+ RG+D++ V VIN+DFP + E Y+HR+GR+GR G G A T
Sbjct: 401 TDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 191/370 (51%), Gaps = 26/370 (7%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
+E+ L ELL + G+++PSPIQ +IP+ L D++ A+ G+GKTAAF +P L
Sbjct: 315 WEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAY 374
Query: 192 VDQ-----DNNVIQ---VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIM 243
+ + + N + V++ PTRELA Q + + +L +V GG S+++ +
Sbjct: 375 ISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGL 434
Query: 244 RLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRN 303
++ Q +++ TPGR++D ++ VL C+ +V+DEAD+++ F+P + ++ +P +
Sbjct: 435 KITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSS 494
Query: 304 -----------------RQILMFSATFPVTVKDFKDRFLHKPYVINL-MDELTLKGITQF 345
R MFSAT P V+ ++L P V+ + T I+Q
Sbjct: 495 NLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQH 554
Query: 346 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 405
++E +K L L +L +I+F N+ + +AK + + GY +H Q+
Sbjct: 555 VIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQ 614
Query: 406 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLG 465
R FR LV TD+ RGIDI V VIN+D PK+ E Y HR+GR+GR G G
Sbjct: 615 REISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSG 674
Query: 466 LAVNLITYED 475
+A + +T D
Sbjct: 675 VATSFLTLHD 684
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 181/340 (53%), Gaps = 15/340 (4%)
Query: 148 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVI-------- 199
K FE+PSPIQ + P L G D++ AK G+GKT AF IPA+ V + N I
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVN 191
Query: 200 -QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 258
++L PTRELA+Q S V +E G+ ++ + GG+S I + V +++GTPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 259 ILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVK 318
+ DL + V L D S +V+DEAD++L F+ ++ ++ + RQ++MFSAT+P+ V
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVH 311
Query: 319 DFKDRFLHK---PYVINLMDELTLKGITQFYAFVEER---QKVHCLNTLFSKLQINQSII 372
F+ +I +D + Q ++ER Q++ L + K Q N+ ++
Sbjct: 312 KLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLV 371
Query: 373 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 432
F E L + + + G+ IH Q R R F+ G+C LV TD+ RG+D
Sbjct: 372 FALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLD 431
Query: 433 IQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 472
I V VVIN+ FP E Y+HR+GR+GR G G+A T
Sbjct: 432 IPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 190/353 (53%), Gaps = 14/353 (3%)
Query: 134 DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVD 193
D + E++ + +G E+ PIQ+ + A+ G D++ RA+ GTGKT AF IP ++K+
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 194 QDN------NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
+ N Q ++L PTRELA Q + +E L + GGT + + L
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSL--DTICLYGGTPIGQQMRELNY 237
Query: 248 PVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
+ + VGTPGRI+DL K+G L + +V+DEAD++L F ++ ++Q LP RQ +
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSK 364
MFSAT P ++ ++L+ P I+L+ D+ GIT + + + + L +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 365 -LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
+ + I+F + + LA + + Y C +H + Q R R FR+G LV
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGLAK-SYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDR 476
TD+ RG+D+ V++VI+++ P N ET++HR GR+GR G G A+ LI +D+
Sbjct: 417 TDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAI-LIHGQDQ 468
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 203/393 (51%), Gaps = 21/393 (5%)
Query: 94 VQSEAVDS---SSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGF 150
+QS+ +DS + Q K P +DT T FE L + E G
Sbjct: 28 IQSQKLDSDQNTPQFEKFTNPNPSSDT---------TSATNFEGLGLAEWAVETCKELGM 78
Query: 151 ERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTREL 210
+P+P+Q +P L G D+L A+ G+GKTAAF +P L ++ +D + +++ PTREL
Sbjct: 79 RKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTREL 138
Query: 211 ALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG---V 267
A Q ++ K LG L ++ V GG + M L H+++ TPGRI L +
Sbjct: 139 AFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVP 198
Query: 268 CVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHK 327
V LV+DEAD++L FQ ++ + Q LP++RQ L+FSAT ++ + +K
Sbjct: 199 PVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNK 258
Query: 328 PYVINLMDEL-TLKGITQFYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVEL 382
Y + L T+ +TQ + F ++ K VH L+ + K I ++IF ++ +
Sbjct: 259 AYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDK-GIRSAMIFVSTCRTCQR 317
Query: 383 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 442
L+ + EL +H+ Q R F++G L+ TD+ +RG+DI V++VIN+
Sbjct: 318 LSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINY 377
Query: 443 DFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
D P++ Y+HRVGR+ R G GLAV++IT D
Sbjct: 378 DIPRDPRDYVHRVGRTARAGRGGLAVSIITETD 410
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 180/337 (53%), Gaps = 12/337 (3%)
Query: 150 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQV------VI 203
+E+P PIQ +++PI ++G D + AK G+GKT F +P L + +D ++ ++
Sbjct: 549 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 607
Query: 204 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 262
+ PTREL Q ++ K L I+ + GG+ + I L + ++V TPGR++D+
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 263 --AKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDF 320
+ + L+ + LVMDEAD++ F+P I ++IQ + RQ ++FSATFP V+
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 321 KDRFLHKPYVINLMDELTL-KGITQFYAFVEERQK-VHCLNTLFSKLQINQSIIFCNSVN 378
+ L+KP I + + K ITQ E + + L L + + ++F S
Sbjct: 728 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 787
Query: 379 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 438
+ + L + + + Y C +H Q R DF+N C L+ T + RG+D++ + +
Sbjct: 788 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 847
Query: 439 VINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
V+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 848 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 884
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 180/337 (53%), Gaps = 12/337 (3%)
Query: 150 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQV------VI 203
+E+P PIQ +++PI ++G D + AK G+GKT F +P L + +D ++ ++
Sbjct: 211 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 269
Query: 204 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 262
+ PTREL Q ++ K L I+ + GG+ + I L + ++V TPGR++D+
Sbjct: 270 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 329
Query: 263 --AKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDF 320
+ + L+ + LVMDEAD++ F+P I ++IQ + RQ ++FSATFP V+
Sbjct: 330 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 389
Query: 321 KDRFLHKPYVINLMDELTL-KGITQFYAFVEERQK-VHCLNTLFSKLQINQSIIFCNSVN 378
+ L+KP I + + K ITQ E + + L L + + ++F S
Sbjct: 390 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 449
Query: 379 RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV 438
+ + L + + + Y C +H Q R DF+N C L+ T + RG+D++ + +
Sbjct: 450 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 509
Query: 439 VINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
V+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 510 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 546
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 197/373 (52%), Gaps = 16/373 (4%)
Query: 115 ADTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 174
++ R + G + + E++ + KG E+ PIQ+ + A+ G D++ RA
Sbjct: 89 SERRVGDSESVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRA 148
Query: 175 KNGTGKTAAFCIPALEKVDQDN-------NVIQVVILVPTRELALQTSQVCKELGKHLKI 227
+ GTGKT AF IP ++K+ + N N + ++L PTRELA Q + +E L
Sbjct: 149 RTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPL-CLVLAPTRELARQVEKEFRESAPSL-- 205
Query: 228 QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSP 287
+ GGT + + +L V + VGTPGR++DL K+G L + +V+DEAD++L
Sbjct: 206 DTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQV 265
Query: 288 EFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLM---DELTLKGITQ 344
F ++ +++ LP RQ +MFSAT P ++ ++L+ P ++L+ D+ GIT
Sbjct: 266 GFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITT 325
Query: 345 FYAFVEERQKVHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 403
+ + + + L ++ + + I+F + + L+ + + C +H + Q
Sbjct: 326 YSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALAR-SFKCEALHGDISQ 384
Query: 404 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 463
R R FR+G LV TD+ RG+D+ V+++I+++ P N ET++HR GR+GR G
Sbjct: 385 SQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGK 444
Query: 464 LGLAVNLITYEDR 476
G A+ LI +D+
Sbjct: 445 KGSAI-LIYSQDQ 456
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 190/352 (53%), Gaps = 10/352 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
FE L + I +KG++ P+PIQ +++P+ L+G D++A A+ G+GKTAAF IP LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 192 VDQD--NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 249
+ Q ++ +IL PTR+LA QT + KELGK ++V + GG S++D L +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 250 HLLVGTPGRILD-LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILM 308
+++ TPGR++ L++ L+ +V DEAD L F + Q++ L NRQ L+
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 309 FSATFPVTVKDFKDRFLHKPYVINLMDELTLK-GITQFYAFVEERQKVHCLNTLFSK--L 365
FSAT P + +F L +P ++ L E + + + V +K L L +
Sbjct: 210 FSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREHIS 269
Query: 366 QINQSIIFCNSVNRVELLAK--KITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 423
Q++IF ++ + VE + K+ + S Y M QD R FR L+
Sbjct: 270 SDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCY--GDMDQDARKIHVSRFRARKTMLLIV 327
Query: 424 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
TD+ RGIDI ++ VIN+DFP + ++HRVGR+ R G G A + +T ED
Sbjct: 328 TDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPED 379
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 187/362 (51%), Gaps = 24/362 (6%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
N F + L L + I + +P+P+Q +IPI G D++A A+ G+GKTAAFC P +
Sbjct: 146 NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205
Query: 190 EKVDQDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
+ +D ++ + VIL PTRELA Q ++ ++V+V GGT +
Sbjct: 206 SGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVN 265
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
I L + V +LV TPGR+ DL ++G L+ L +DEAD++L F+P I++++Q
Sbjct: 266 QQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQ 325
Query: 300 L----PRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL--TLKGITQFYAFVEERQ 353
+ P RQ ++FSATFP ++ FL Y+ + + + I Q FV +
Sbjct: 326 MDMPPPGVRQTMLFSATFPREIQRLASDFLSN-YIFLAVGRVGSSTDLIVQRVEFVHDSD 384
Query: 354 K-VHCLNTLFSKLQ-INQ-----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 406
K H ++ L ++ + NQ +++F + + L + G+ IH Q R
Sbjct: 385 KRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQER 444
Query: 407 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 466
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G+ GL
Sbjct: 445 EVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGL 504
Query: 467 AV 468
A
Sbjct: 505 AT 506
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 188/342 (54%), Gaps = 18/342 (5%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+ L + + I E GF+ + IQ SI L G D+L A+ G+GKT AF IPA+E
Sbjct: 91 FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVEL 150
Query: 192 VDQDN----NVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
+ ++ N V+++ PTRELA+QT V +EL KH V + GG + + + R+
Sbjct: 151 LFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIAS 210
Query: 248 PVHLLVGTPGRILD-LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQI 306
+L++ TPGR+LD L + K LV+DEAD++L F+ + ++++ LP+ RQ
Sbjct: 211 GSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQT 270
Query: 307 LMFSATFPVTVKDFKDRFLHKPYVINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFS 363
+FSAT VKD L P +++ D ++T +G+ Q Y V +Q++ L + F
Sbjct: 271 ALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLIS-FL 329
Query: 364 KLQINQSIIF----CNSVN-RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 418
K +N+ I+ C SV E++ KI+++ S IH M Q+ R + F DF
Sbjct: 330 KKNLNKKIMVFFSTCKSVQFHTEIM--KISDVDVS--DIHGGMDQNRRTKTFFDFMKAKK 385
Query: 419 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 460
L+CTD+ RG+DI +V+ +I +D P Y+HRVGR+ R
Sbjct: 386 GILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTAR 427
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 193/366 (52%), Gaps = 31/366 (8%)
Query: 144 GIYEKGFERPSPIQ--EESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQ-----DN 196
I +G + P P++ EE+IP+ L D++ + G+GKTAAF +P L + + +
Sbjct: 214 NISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREE 273
Query: 197 NVIQ---VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLV 253
N + +++VPTRELA Q + + ++L + + TG S++ ++L Q +++
Sbjct: 274 NQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVI 333
Query: 254 GTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRN---------- 303
TPGR+LD ++ VL C+ LV+DEAD+++ +F+P + +++ +P +
Sbjct: 334 ATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEE 393
Query: 304 -------RQILMFSATFPVTVKDFKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVH 356
R MFSAT ++V+ +FL P V+ + + T K ITQ +E K
Sbjct: 394 LEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGE--TTKFITQQVIMTKESDKFS 451
Query: 357 CLNTLFSKLQINQS-IIFCNSVNRVELLAKKITELGY-SCFYIHAKMLQDHRNRVFHDFR 414
L L L +++ I+F N+ N+V+ + K + ++G +HA Q+ R+ +F+
Sbjct: 452 RLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFK 511
Query: 415 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYE 474
LV TD+ RG+DI + VIN+D P + Y HR+GR+GR G G+A +T E
Sbjct: 512 KKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLE 571
Query: 475 DRFNLY 480
D+ Y
Sbjct: 572 DKDVFY 577
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 190/372 (51%), Gaps = 20/372 (5%)
Query: 119 YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 178
+ T D + + F + L R LL G+++P+PIQ IP+ALTG D+ A A G+
Sbjct: 156 FSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGS 215
Query: 179 GKTAAFCIPALEKV---DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGG 235
GKTAAF +P LE++ + +V+IL PTRELA+Q + + L + I+ + GG
Sbjct: 216 GKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGG 275
Query: 236 TSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCV-LKDCSMLVMDEADKLLSPEFQPSIQ 294
S+++ + L ++V TPGR++D + + V L D ++L++DEAD+LL F I
Sbjct: 276 LSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIT 335
Query: 295 QLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDELTLK--GITQFYAFVEER 352
+L++ P+ RQ ++FSAT VK+ L+KP ++ D + G+T+ +
Sbjct: 336 ELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLS-ADPSARRPPGLTEEVVRIRRT 394
Query: 353 QKVH--------CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 404
++ + C T SK+ IIF + L G +H + Q
Sbjct: 395 REANQEAVLLSLCTRTFKSKV-----IIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQA 449
Query: 405 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL 464
R FR L+ TD+ RG+DI V VIN+ P+ ++Y+HRVGR+ R G
Sbjct: 450 QRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGRE 509
Query: 465 GLAVNLITYEDR 476
G AV +T DR
Sbjct: 510 GYAVTFVTDSDR 521
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 189/362 (52%), Gaps = 24/362 (6%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
N F + L L + I + +P+P+Q +IPI L G D++A A+ G+GKTAAFC P +
Sbjct: 159 NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218
Query: 190 EKVDQDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
+ +D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 219 SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPIN 278
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
+ L + V +LV TPGR+ DL ++ ++ L +DEAD++L F+P I+++++
Sbjct: 279 QQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 338
Query: 300 L---PRN-RQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL--TLKGITQFYAFV-EER 352
+ PR RQ L+FSATFP ++ FL Y+ + + + I Q FV +
Sbjct: 339 MDMPPRGVRQTLLFSATFPREIQRLAADFLAN-YIFLAVGRVGSSTDLIVQRVEFVLDSD 397
Query: 353 QKVHCLNTLFSK----LQINQS--IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 406
++ H ++ L ++ +Q Q+ ++F + + L + G+ IH Q R
Sbjct: 398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457
Query: 407 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 466
F++G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G GL
Sbjct: 458 EVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 517
Query: 467 AV 468
A
Sbjct: 518 AT 519
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 22/360 (6%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
N F D L L + I + RP+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 190 EKVDQDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
+ +D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I+++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 300 L---PRN-RQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL--TLKGITQFYAFVEERQ 353
+ PR RQ ++FSATFP ++ F+ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 354 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 408
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 409 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 22/360 (6%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
N F D L L + I + RP+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 190 EKVDQDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
+ +D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I+++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 300 L---PRN-RQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL--TLKGITQFYAFVEERQ 353
+ PR RQ ++FSATFP ++ F+ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 354 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 408
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 409 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 22/360 (6%)
Query: 130 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 189
N F D L L + I + RP+P+Q +IPI L D++A A+ G+GKTAAFC P +
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 190 EKVDQDNNVIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
+ +D +V + VIL PTRELA Q K+ ++V+V GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
+ L + +LV TPGR+ DL ++ ++ L +DEAD++L F+P I+++++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 300 L---PRN-RQILMFSATFPVTVKDFKDRFLHKPYVINLMDEL--TLKGITQFYAFVEERQ 353
+ PR RQ ++FSATFP ++ F+ Y+ + + + ITQ FV+E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSN-YIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 354 K-VHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 408
K H ++ L ++ + +++F + + L + + IH Q R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 409 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
F+ G LV TD+ RG+DI V V+NFD P + + Y+HR+GR+GR G G+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 196/386 (50%), Gaps = 23/386 (5%)
Query: 114 PADTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILAR 173
P KT D +K F+ + L L I + GFE + +QE ++PI L G D+LA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 174 AKNGTGKTAAFCIPALEKV--------DQDNNVIQVVILVPTRELALQTSQVCKELGK-H 224
AK GTGKT AF +PA+E V D I V+++ PTRELA Q + L K H
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYH 485
Query: 225 LKIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLAKKG---VCVLKDCSMLVMDE 280
I V V GGT L + R+ P +LV TPGR+ D + L +LV+DE
Sbjct: 486 PSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDE 545
Query: 281 ADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY-VINLMDE--- 336
AD LL F+ I+++I +P+ RQ +FSAT P V+ L + + IN + E
Sbjct: 546 ADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSG 605
Query: 337 LTLKGITQFYAFVEERQKVHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGY 392
T + +TQ Y + L+ L + + + IIFC + L+A +++L
Sbjct: 606 ETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSL 665
Query: 393 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 452
+ IH++ Q +R RV +FR LV +D+ RG+D V++V+ P + E Y+
Sbjct: 666 NVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYI 725
Query: 453 HRVGRSGRFGHLGLAVNLIT-YEDRF 477
HR+GR+GR G G V L+ +E+ F
Sbjct: 726 HRLGRTGRKGKEGEGVLLLAPWEEYF 751
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 198/380 (52%), Gaps = 22/380 (5%)
Query: 114 PADTRYK---TEDVTATKGNEFEDYFLKRELLMGIY-EKGFERPSPIQEESIPIALTG-- 167
P D+ K + D T + FED L EL+ G+Y E FE+PS IQ S+P+ +T
Sbjct: 72 PEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPH 131
Query: 168 SDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKI 227
++A+A NG+GKT F + L +VD Q + + PTRELA Q +V +++GK I
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGI 191
Query: 228 QVMVTTGGTSLKDDIMRLYQPV--HLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL 285
+ ++ PV H+++GTPG + L +LV DEAD +L
Sbjct: 192 TAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHML 251
Query: 286 SPE-FQPSIQQLIQFLPR---NRQILMFSATFPVTVKDFKDRFLHKPYVINLMDE-LTLK 340
+ + F+ ++++ + R N Q+L+FSATF TVKDF R + P + + E L L
Sbjct: 252 ATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALD 311
Query: 341 GITQFYAFV-EERQKVHCLNTLFSKL-QINQSIIFCNSVNRVELLAKKITELGYSCFYIH 398
+ Q+ +E+ K+ + +L I Q+IIF + + + K + E+GY +H
Sbjct: 312 SVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVH 371
Query: 399 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET-------Y 451
+ + R+++ +F+ + L+ TD+ RG D Q VN+V+N++ P ET Y
Sbjct: 372 GNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVY 431
Query: 452 LHRVGRSGRFGHLGLAVNLI 471
LHRVGR+GRFG G NL+
Sbjct: 432 LHRVGRAGRFGRKGAVFNLL 451
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
FE L I E GF R + IQ ++IP + G D+L A+ G+GKT AF IPA+E
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 192 VDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ 247
+ + N V+++ PTRELA+Q+ V KEL K+ V GG K + L +
Sbjct: 216 LYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAK 275
Query: 248 PVHLLVGTPGRILD-LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQI 306
V+LLV TPGR+LD L + K+ LVMDEAD++L F+ +++++ LP+ RQ
Sbjct: 276 GVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQT 335
Query: 307 LMFSATFPVTVKDFKDRFLHKPYVINLMD---ELTLKGITQFYAFVEERQKVHCLNTLFS 363
+FSAT V+D L P I++ + E+T +G+ Q Y V ++ L T
Sbjct: 336 SLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLK 395
Query: 364 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 422
+ Q + I +F ++ + A+ + + C I + Q+ R F F L+
Sbjct: 396 RFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILL 455
Query: 423 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRF-GHLGLAVNLIT 472
CT++ RG+D V+ ++ +D P N Y+HRVGR+ R G G A+ ++T
Sbjct: 456 CTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 196/385 (50%), Gaps = 23/385 (5%)
Query: 115 ADTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 174
AD D TK F+ Y L L I + G+E + +QE ++PI L G D+LA+A
Sbjct: 306 ADKTRNANDSYLTK-TRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKA 364
Query: 175 KNGTGKTAAFCIPALEKV--------DQDNNVIQVVILVPTRELALQTSQVCKELGK-HL 225
K GTGKT AF +P++E V D I +++ PTRELA Q + L K H
Sbjct: 365 KTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHP 424
Query: 226 KIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLAKKG---VCVLKDCSMLVMDEA 281
I V V GGT L + R+ P +LV TPGR+ D + LK +LV+DEA
Sbjct: 425 SIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEA 484
Query: 282 DKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY-VINLMDELTLK 340
D LL F+ I+++I +P+ RQ +FSAT P V+ L + + +N + E T++
Sbjct: 485 DHLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIE 544
Query: 341 G---ITQFYAFVEERQKVHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGYS 393
+ Q + + L TL + + + I+FC + +L+A + EL +
Sbjct: 545 THQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLN 604
Query: 394 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 453
IH++ Q +R RV ++FR LV +D+ RG+D V +V+ PK+ E Y+H
Sbjct: 605 VREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIH 664
Query: 454 RVGRSGRFGHLGLAVNLIT-YEDRF 477
R+GR+GR G G + L+ +E+ F
Sbjct: 665 RLGRTGRKGKEGEGILLLAPWEEYF 689
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 196/380 (51%), Gaps = 23/380 (6%)
Query: 120 KTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTG 179
KT D +K F+ + L L GI + GF+ + +QE ++P+ L G DILA+AK GTG
Sbjct: 71 KTSDSYLSK-TRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTG 129
Query: 180 KTAAFCIPALEKV------DQDNNVIQVVILV--PTRELALQTSQVCKELGK-HLKIQVM 230
KT AF +P++E V +DN +++LV PTRELA Q + L K H I V
Sbjct: 130 KTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQ 189
Query: 231 VTTGGTSLKDDIMRLYQ-PVHLLVGTPGRI---LDLAKKGVCVLKDCSMLVMDEADKLLS 286
V GGT L + RL + P +LV TPGR+ +D L +LV+DEAD LL
Sbjct: 190 VVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLD 249
Query: 287 PEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY-VINLMDE---LTLKGI 342
F+ I+++I +P+ RQ +FSAT V+ L + + +N + E T + +
Sbjct: 250 MGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKV 309
Query: 343 TQFYAFVEERQKVHCLNTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGYSCFYIH 398
+Q Y + L L K + + IIFC + L+A + +L + IH
Sbjct: 310 SQMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIH 369
Query: 399 AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRS 458
++ Q +R RV +FR LV +D+ RG+D V++V+ P + E Y+HR+GR+
Sbjct: 370 SRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRT 429
Query: 459 GRFGHLGLAVNLIT-YEDRF 477
GR G G V L+ +E+ F
Sbjct: 430 GRKGKEGEGVLLLAPWEEYF 449
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 195/365 (53%), Gaps = 25/365 (6%)
Query: 123 DVTATKGNEF--EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 180
+V A G E L + L + ++G PIQ + AL G DI+ARAK GTGK
Sbjct: 93 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 181 TAAFCIPALEKVDQD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVM 230
T AF IP ++++ ++ + + ++L PTRELA Q + KE +L +
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYL--STV 210
Query: 231 VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQ 290
GG S L + V ++VGTPGRI+DL + L + LV+DEAD++L+ F+
Sbjct: 211 CVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 291 PSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLM---DELTLKGITQFYA 347
+++ +++ LP RQ ++FSAT P VK ++L P I+L+ DE +GI + YA
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI-KLYA 329
Query: 348 FV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 403
+R + L T+++K ++I+F + + ++ ++ + +H + Q
Sbjct: 330 IATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQ 386
Query: 404 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 463
R R + FR G LV TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 464 LGLAV 468
G A+
Sbjct: 447 EGSAI 451
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 195/365 (53%), Gaps = 25/365 (6%)
Query: 123 DVTATKGNEF--EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 180
+V A G E L + L + ++G PIQ + AL G DI+ARAK GTGK
Sbjct: 93 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 181 TAAFCIPALEKVDQD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVM 230
T AF IP ++++ ++ + + ++L PTRELA Q + KE +L +
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYL--STV 210
Query: 231 VTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQ 290
GG S L + V ++VGTPGRI+DL + L + LV+DEAD++L+ F+
Sbjct: 211 CVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 291 PSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLM---DELTLKGITQFYA 347
+++ +++ LP RQ ++FSAT P VK ++L P I+L+ DE +GI + YA
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGI-KLYA 329
Query: 348 FV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 403
+R + L T+++K ++I+F + + ++ ++ + +H + Q
Sbjct: 330 IATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQ 386
Query: 404 DHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 463
R R + FR G LV TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 464 LGLAV 468
G A+
Sbjct: 447 EGSAI 451
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 184/362 (50%), Gaps = 16/362 (4%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F L +LL+ + G++ P+PIQ ++IP ALTG +LA A G+GKTA+F +P + +
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 192 V---------DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 242
DQ N + +V L PTREL +Q K LGK L + + GG + +
Sbjct: 172 CTTYHSEHPSDQRRNPLAMV-LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 243 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPR 302
R+ Q V L++GTPGR++DL K L + V+DE D +L F+ + Q+ Q L +
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQ 290
Query: 303 NRQILMFSATFPVTVKDFKDRFLHKPYVINLMD-ELTLKGITQFYAFVEERQKVHCL-NT 360
Q+L+FSAT V+ + ++++ + K + Q +V+ +QK L +
Sbjct: 291 P-QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDI 349
Query: 361 LFSKLQIN-QSIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGAC 418
L S+ ++++ +S +LLA IT + G IH + R V F G
Sbjct: 350 LRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEV 409
Query: 419 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 478
LV T + RG+D+ V VI FD P + Y+H +GR+ R G G A+ + +DR N
Sbjct: 410 PVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-N 468
Query: 479 LY 480
L+
Sbjct: 469 LF 470
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 184/362 (50%), Gaps = 16/362 (4%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F L +LL+ + G++ P+PIQ ++IP ALTG +LA A G+GKTA+F +P + +
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 192 V---------DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 242
DQ N + +V L PTREL +Q K LGK L + + GG + +
Sbjct: 172 CTTYHSEHPSDQRRNPLAMV-LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 243 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPR 302
R+ Q V L++GTPGR++DL K L + V+DE D +L F+ + Q+ Q L +
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQ 290
Query: 303 NRQILMFSATFPVTVKDFKDRFLHKPYVINLMD-ELTLKGITQFYAFVEERQKVHCL-NT 360
Q+L+FSAT V+ + ++++ + K + Q +V+ +QK L +
Sbjct: 291 P-QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDI 349
Query: 361 LFSKLQIN-QSIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGAC 418
L S+ ++++ +S +LLA IT + G IH + R V F G
Sbjct: 350 LRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEV 409
Query: 419 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 478
LV T + RG+D+ V VI FD P + Y+H +GR+ R G G A+ + +DR N
Sbjct: 410 PVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR-N 468
Query: 479 LY 480
L+
Sbjct: 469 LF 470
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 186/357 (52%), Gaps = 12/357 (3%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL-- 189
FED +++ I ++ +E+P+ IQ +++PI L+G D++ AK G+GKTAAF +P +
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 190 ----EKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 245
++ +D I V I PTRELA Q K+ K ++V GG S + L
Sbjct: 290 IMDQPELQRDEGPIGV-ICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 246 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQ 305
++V TPGR++D+ K + S LV+DEAD++ F+P ++ ++ + +RQ
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 408
Query: 306 ILMFSATFPVTVKDFKDRFLHKPYVINLMD-ELTLKGITQFYAFV-EERQKV-HCLNTLF 362
L+FSAT P V+ L P + + + + + ITQ + + +K+ L L
Sbjct: 409 TLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLP 468
Query: 363 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 422
+ ++F + V+ + ++T + +H Q R F++G L+
Sbjct: 469 GMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLI 528
Query: 423 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL-GLAVNLITY-EDRF 477
TD+ RG+DI+++ V+N+D K+ + ++HR+GR+GR G G+A L+T E RF
Sbjct: 529 ATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARF 585
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 179/322 (55%), Gaps = 23/322 (7%)
Query: 164 ALTGSDILARAKNGTGKTAAFCIPALEKVDQD----------NNVIQVVILVPTRELALQ 213
AL G DI+ARAK GTGKT AF IP ++++ ++ + + ++L PTRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 214 TSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDC 273
+ KE +L + GG S L + V ++VGTPGRI+DL + L +
Sbjct: 103 VEKEIKESAPYL--STVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEV 160
Query: 274 SMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINL 333
LV+DEAD++L+ F+ +++ +++ LP RQ ++FSAT P VK ++L P I+L
Sbjct: 161 EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 220
Query: 334 M---DELTLKGITQFYAFV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKK 386
+ DE +GI + YA +R + L T+++K ++I+F + + ++
Sbjct: 221 VGDQDEKLAEGI-KLYAIATTSTSKRTILSDLITVYAK--GGKTIVFTQTKRDADEVSLA 277
Query: 387 ITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 446
++ + +H + Q R R + FR G LV TD+ +RG+DI V++VI+++ P
Sbjct: 278 LSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 447 NAETYLHRVGRSGRFGHLGLAV 468
+ ET++HR GR+GR G G A+
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAI 358
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 16/355 (4%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F+D R +L + EKG +P+PIQ + +P+ L G D++ A G+GKT F +P +
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207
Query: 192 VDQDNNVIQV--------VILVPTRELALQTSQVCKELGKHL------KIQVMVTTGGTS 237
Q+ ++ + +I+ P+RELA QT +V ++ L ++ ++ GG
Sbjct: 208 ALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGID 267
Query: 238 LKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLI 297
++ + + + VH++V TPGR+ D+ K L C L +DEAD+L+ F+ I+++
Sbjct: 268 MRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVF 327
Query: 298 QFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLMDELTLK-GITQFYAFVEERQKVH 356
RQ L+FSAT P ++ F L KP +N+ + Q +V++ K+
Sbjct: 328 DHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIV 387
Query: 357 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 416
L K +IFC + V+ + + + G IH Q+ R F+ G
Sbjct: 388 YLLECLQKTS-PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAG 446
Query: 417 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLI 471
LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 447 KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 501
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 39/336 (11%)
Query: 150 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQV------VI 203
+E+P PIQ +++PI ++G D + AK G+GKT F +P L + +D ++ ++
Sbjct: 416 YEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KDQPPVEAGDGPIGLV 474
Query: 204 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL- 262
+ PTREL Q ++ K L I + GG+ + I L + ++V TPGR++D+
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 534
Query: 263 --AKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDF 320
+ + L+ + LVMDEAD++ F+P I +++Q + +RQ ++FSATFP V+
Sbjct: 535 CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETL 594
Query: 321 KDRFLHKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNR 379
+ L+KP I + + K ITQ E ++ FS+L
Sbjct: 595 ARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESER-------FSRL-------------- 633
Query: 380 VELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVV 439
+ELL + E G ++ ++ + DF++ C L+ T + RG+D++ + +V
Sbjct: 634 LELLGE-WYEKGKVLVFVRSQ------EKSISDFKSDVCNLLIATSVAARGLDVKELELV 686
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
+NFD P + E Y+HRVGR+GR G G AV I+ +D
Sbjct: 687 VNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 722
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 181/366 (49%), Gaps = 19/366 (5%)
Query: 122 EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 181
ED+ N F D LL + +KG P+PIQ + +P+ L+G D++ A G+GKT
Sbjct: 90 EDIPPPIKN-FMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKT 148
Query: 182 AAFCIPALEKVDQDNNVIQV--------VILVPTRELALQTSQVCKELGKHL------KI 227
F +P + Q+ ++ + +++ P+RELA QT V ++ L ++
Sbjct: 149 LVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRL 208
Query: 228 QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSP 287
+ ++ GG ++ + + + VH++V TPGR+ D+ K L C +L +DEAD+L+
Sbjct: 209 RSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDL 268
Query: 288 EFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPYVINL--MDELTLKGITQF 345
F+ I+ + RQ L+FSAT P ++ F L KP +N+ L I +
Sbjct: 269 GFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEV 328
Query: 346 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDH 405
+E + V+ L L + +IFC + V+ + + + G IH Q+
Sbjct: 329 EYVKQEAKIVYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQED 386
Query: 406 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLG 465
R+ F+ G LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G
Sbjct: 387 RDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTG 446
Query: 466 LAVNLI 471
+A I
Sbjct: 447 IATTFI 452
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 171/329 (51%), Gaps = 17/329 (5%)
Query: 119 YKTEDVTATKGNE-------FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDIL 171
Y+TE + +G + F+D +L I + GF P+PIQ + P+AL G D++
Sbjct: 147 YRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
Query: 172 ARAKNGTGKTAAFCIPAL------EKVDQDNNVIQVVILVPTRELALQTSQVCKELGKHL 225
A+ G+GKT A+ +PAL ++ QD+ I V+IL PTRELA+Q + ++ G
Sbjct: 207 GIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS 265
Query: 226 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL 285
++ GG I L + V +++ TPGR++D+ + LK + LV+DEAD++L
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 286 SPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY--VINLMDELTLKGIT 343
F+P I++++ + +RQ L++SAT+P V+ +FL PY +I D + I
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSIN 385
Query: 344 QFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKML 402
Q V +K + L TL +L I IF + + + +++ G+ IH
Sbjct: 386 QVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKT 445
Query: 403 QDHRNRVFHDFRNGACRNLVCTDLFTRGI 431
Q R+RV +F++G + TD+ RG+
Sbjct: 446 QSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 16/335 (4%)
Query: 159 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKV---------DQDNNVIQVVILVPTRE 209
++IP ALTG +LA A G+GKTA+F +P + + DQ N + +V L PTRE
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMV-LAPTRE 60
Query: 210 LALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCV 269
L +Q K LGK L + + GG + + R+ Q V L++GTPGR++DL K
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 270 LKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKPY 329
L + V+DE D +L F+ + Q+ Q L + Q+L+FSAT V+ +
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLAKEII 179
Query: 330 VINLMD-ELTLKGITQFYAFVEERQKVHCL-NTLFSKLQIN-QSIIFCNSVNRVELLAKK 386
++++ + K + Q +V+ +QK L + L S+ ++++ +S +LLA
Sbjct: 180 LVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 387 ITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP 445
IT + G IH + R V F G LV T + RG+D+ V VI FD P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 446 KNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
+ Y+H +GR+ R G G A+ + +DR NL+
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVNEDDR-NLF 333
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 166/340 (48%), Gaps = 8/340 (2%)
Query: 141 LLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQ-DNNVI 199
+L + E GF+ P+PIQ ++IPI L+G + A A G+GKT AF P L K+ + + I
Sbjct: 152 ILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGI 211
Query: 200 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI 259
+ VIL P RELA QT++ K+L K + + T D +L+ +L+ TP R+
Sbjct: 212 RAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLW--CDVLISTPMRL 269
Query: 260 LDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL--MFSATFPVTV 317
K L LV+DE+DKL I +++ N I+ +FSAT P +V
Sbjct: 270 KRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKAC-SNPSIIRSLFSATLPDSV 328
Query: 318 KDFKDRFLHKPY-VINLMDELTLKGITQFYAFV-EERQKVHCLNTLFSKLQINQSIIFCN 375
++ +H VI + + Q F E K+ L F++ +IF
Sbjct: 329 EELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQ 388
Query: 376 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 435
S R + L ++ IH+ + R FR G L+ TD+ RG+D +
Sbjct: 389 SKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKG 448
Query: 436 VNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
+N VIN+DFP +A Y+HR+GRSGR G G A+ T +D
Sbjct: 449 INCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQD 488
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 181/371 (48%), Gaps = 24/371 (6%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F++ + L + G + + +Q+ ++ L G D L +AK GTGK+ AF +PA+E
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 192 VDQDNNV---------IQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDD 241
V + N I +IL PTRELA Q + K L K H I V GGT K D
Sbjct: 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLD 449
Query: 242 IMRL-YQPVHLLVGTPGRILD--LAKKGVCV-LKDCSMLVMDEADKLLSPEFQPSIQQLI 297
RL +P +L+ TPGR+LD K G+ L + ++DEAD LL F+ ++++I
Sbjct: 450 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKII 509
Query: 298 QFLPRNRQILMFSATFPVTVKDFKDRFLHKPY----VINLMDELTLKGITQFYAFVEERQ 353
LPR RQ L+FSAT P V+ L + + I L T + Q
Sbjct: 510 DCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHES 569
Query: 354 KVHCLNTLFSKLQINQS-----IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 408
H + L K IN + I+FC++ L+ + E+ + IHA+ Q HR R
Sbjct: 570 HFHLVPHLL-KEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTR 628
Query: 409 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
V +F+ LV +D+ RG++ V +VI P + E Y+HR+GR+GR G G +
Sbjct: 629 VSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGL 688
Query: 469 NLITYEDRFNL 479
LI +R+ L
Sbjct: 689 LLIAPWERYFL 699
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 26/353 (7%)
Query: 137 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDN 196
L +++ + GFE +P+Q E+IP + D++ A G+GKT AF +P +E + + N
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 197 NV------IQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKDDIMRLYQP- 248
+ + VI+ PTREL+ Q +V + L + ++ GG ++ D+ L +
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 249 VHLLVGTPGRILDLAKKGVCV-LKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
+LL+GTPGR+ D+ K+ + ++ +L++DEAD+LL FQ + +I LP+ R+
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 308 MFSATFPVTVKDFKDRFLHKPYVINLMDEL--------TLKGITQFYAFVEERQKVHCLN 359
+FSAT V D L K + N M+ + T G+ Y E QK L
Sbjct: 203 LFSATQTQAVAD-----LAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLV 257
Query: 360 TLFSKLQINQSIIF---CNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRN 415
L + + + ++F C V+ L+ KI L S F H KM Q R+ F
Sbjct: 258 HLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTE 317
Query: 416 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
+ L+CTD+ RG+DI ++ V+ +D P++ + ++HRVGR+ R G A+
Sbjct: 318 ASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAI 370
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 181/371 (48%), Gaps = 24/371 (6%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F++ + L + G + + +Q+ ++ L G D L +AK GTGK+ AF +PA+E
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 192 VDQDNNV---------IQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDD 241
V + N I V+IL PTRELA Q + K L K H I V GGT + D
Sbjct: 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLD 496
Query: 242 IMRL-YQPVHLLVGTPGRILD--LAKKGVCV-LKDCSMLVMDEADKLLSPEFQPSIQQLI 297
RL +P +L+ TPGR+LD K G+ L + ++DEAD LL F+ ++++I
Sbjct: 497 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKII 556
Query: 298 QFLPRNRQILMFSATFPVTVKDFKDRFLHKPY----VINLMDELTLKGITQFYAFVEERQ 353
LPR RQ L+FSAT P V+ L + + I L T + Q
Sbjct: 557 DCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHES 616
Query: 354 KVHCLNTLFSKLQIN-----QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 408
H + L K IN + I+FC++ L+ + E+ + IHA+ Q HR
Sbjct: 617 HFHLVPHLL-KEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTC 675
Query: 409 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
V +F+ LV +D+ RG++ V +VI P + E Y+HR+GR+GR G G +
Sbjct: 676 VSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGL 735
Query: 469 NLITYEDRFNL 479
LI +R+ L
Sbjct: 736 LLIAPWERYFL 746
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 172/333 (51%), Gaps = 22/333 (6%)
Query: 156 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQD----NNVIQVVILVPTRELA 211
+Q +IP AL G DIL A+ G+GKT AF IP LEK+ ++ + + +I+ PTRELA
Sbjct: 97 VQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVGCIIISPTRELA 156
Query: 212 LQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRIL---DLAKKGVC 268
QT V ++GK K + GG D +++LV PGR+L D C
Sbjct: 157 AQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFEC 216
Query: 269 VLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVTVKDFKDRFLHKP 328
+L++DEAD++L F+ + +I LP++RQ L+FSAT VKD L P
Sbjct: 217 --PQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDP 274
Query: 329 YVINLMDE---LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLA 384
I++ E T + Q V +K+ L + F K +N I +F ++ +V+ +
Sbjct: 275 EYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWS-FIKTHLNSRILVFLSTKKQVKFVH 333
Query: 385 KKITEL--GYSCFYIHAKMLQDHRNRVFHDF--RNGACRNLVCTDLFTRGIDI-QAVNVV 439
+ +L G +H KM Q+ R V+ F R L CTD+ RG+D +AV+ V
Sbjct: 334 EAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQSV---LFCTDVLARGLDFDKAVDWV 390
Query: 440 INFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 472
+ D P++ +Y+HRVGR+ RF G ++ +T
Sbjct: 391 VQVDCPEDVASYIHRVGRTARFYTQGKSLLFLT 423
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 40/377 (10%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
F++ L E++ + E E P+ IQ IP + ++ + G+GKT A+ +P ++
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173
Query: 192 VDQDNNVI---------QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 242
+ +D + + V+L PTREL+ Q +V K + H + + ++ +GG+ ++
Sbjct: 174 MREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQE 233
Query: 243 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPR 302
L + ++VGTPGRIL ++G V D + LV+DEAD + F P I++ + L +
Sbjct: 234 DSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQ 293
Query: 303 NR--------QILMFSATFPVTVKDFKDR-----------FLHKPYVINLMDELTLKGIT 343
Q ++ +AT + V+ D LHK D + L G
Sbjct: 294 RALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSG-- 351
Query: 344 QFYAFVEERQKVHCLNTLFSKL-QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML 402
E + L L L + ++ ++FCN++N + ++E S H ++
Sbjct: 352 ------GEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVP 405
Query: 403 QDHRNRVFHDFRN--GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 460
+ R F++ G C LVCTDL RG+D+ V+ V+ FDFPKN+ YLHR GR+ R
Sbjct: 406 AEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTAR 464
Query: 461 FGHLGLAVNLITYEDRF 477
G G +L++ +D+
Sbjct: 465 MGAKGKVTSLVSRKDQM 481
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 25/357 (7%)
Query: 137 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDN 196
L +++ + + FE +P+Q +IP+ + D+ A G+GKT AF +P +E + +
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 197 NV------IQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKDDIMRLYQP- 248
+ + VI+ PTREL+ Q V + L + ++ GG +K D+ + +
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 249 VHLLVGTPGRILDLAKK-GVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQIL 307
++L+GTPGR+ D+ ++ + ++ +L++DEAD+LL FQ + +I LP+ R+
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 308 MFSATFPVTVKDFKDRFLHKPYVI------------NLMDELTLKGITQFYAFVEERQKV 355
+FSAT V++ L P + L + T G+ Y E +K
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKS 262
Query: 356 HCLNTLFSKLQINQSIIF---CNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFH 411
L L K + I+F C SV+ L+ KI L S IH M Q+ R++
Sbjct: 263 SQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALA 322
Query: 412 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 468
F + L+CTD+ RG+DI ++ V+ +D P++ + HR GR+ R G G A+
Sbjct: 323 SFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAI 379
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 179/400 (44%), Gaps = 62/400 (15%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
FE+ L LL + +GF P+ +Q ++P + G D + ++ G+GKT A+ +P L +
Sbjct: 112 FEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSE 171
Query: 192 V-------------DQDNNVIQVVILVPTRELALQ-TSQVCKELGKHLKIQVMVTTGGTS 237
+ + IQ +I+ P+REL +Q +V K LG + V GG +
Sbjct: 172 IGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGAN 231
Query: 238 L--KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQ 295
+++ ++ +P ++VGTPGRI +++K G C LV+DE D+LLS F+ I +
Sbjct: 232 RMRQEEALKKNKPA-IVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHR 290
Query: 296 LIQFLPR--------------NRQILMFSATFPVTVKDFKDRFLHKPYVINLMDELTLK- 340
+++ + + NRQ ++ SAT P +V + H+P ++ L
Sbjct: 291 ILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDT 350
Query: 341 ------------------------------GITQFYAFVEERQKVHCLNTLFSKLQINQS 370
+ +Y + + KV L L
Sbjct: 351 VQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSV 410
Query: 371 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 430
I F N +++ + K+ G + +H + + R+ V F+NG + LV +L RG
Sbjct: 411 IAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARG 470
Query: 431 IDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNL 470
+D+ ++V+N + P +A Y HR GR+GR G G V +
Sbjct: 471 LDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTV 510
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 172/377 (45%), Gaps = 33/377 (8%)
Query: 122 EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 181
EDV N + + L + G E PIQ + + L G+D++ RA+ G GKT
Sbjct: 88 EDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKT 147
Query: 182 AAFCIPALEKVDQD----------NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMV 231
AF +P LE + V++L+PTRELA Q + G L +
Sbjct: 148 LAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCC 207
Query: 232 TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQP 291
GG S +L + V ++VGTPGRI D ++ V+DEAD++L F
Sbjct: 208 LYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVE 267
Query: 292 SIQQLIQFLPRNR--QILMFSATFPVTVKDFKDRFLHKPY-VINLMDELTLKGITQFYAF 348
++ ++ + + Q L+FSAT P VK+ +RFL + I+L+ +K
Sbjct: 268 DVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHI 327
Query: 349 VEERQKVHCLNTLFSKL---------QINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 399
+ C ++L Q+IIF + +V +++ L +H
Sbjct: 328 A-----IPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQV----SELSGLLDGSRALHG 378
Query: 400 KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSG 459
++ Q R FRNG LV T++ RG+DI V ++I + P+ E Y+HR GR+G
Sbjct: 379 EIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTG 438
Query: 460 RFGHLGLAVNLITYEDR 476
R G+ G+AV L Y+ R
Sbjct: 439 RAGNTGVAVTL--YDSR 453
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 179/385 (46%), Gaps = 59/385 (15%)
Query: 132 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 191
FE+ L L+ + +KG E+P+ IQ+ +IP L G D++ARAK G+GKT A+ +P L+K
Sbjct: 48 FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 107
Query: 192 VDQDNNVIQ------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR- 244
+ ++V + ILVP+REL Q L + ++Q+ +S+ MR
Sbjct: 108 LFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRN 167
Query: 245 -LYQPVHLLVGTPGRILDLAKKGV----CVLKDCSMLVMDEADKLLSPEFQPSIQQLIQF 299
L +LV TP I GV V + S+LV+DEAD LLS ++ +++ +
Sbjct: 168 ALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSI 227
Query: 300 LPRNRQILMFSATFPVTVKDFKDRFLHKPYVINLM-----DELTLKGITQFYAFVEERQK 354
+PR Q L+ SAT V+ K LH P V+ L +E + QF+ + K
Sbjct: 228 IPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQDK 287
Query: 355 VHCLNTLFSKLQINQSI-IFCNSVN---RVELLAKKITELGYSCFYIHAKMLQDHRNRVF 410
+ + L + + I IF N+++ R++L +K G ++ ++ Q+ R +
Sbjct: 288 LLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEK---FGIKSAILNGELPQNSRLHIL 344
Query: 411 HDFRNGACRNLVCTD-----------------------------------LFTRGIDIQA 435
F G L+ TD RGID +
Sbjct: 345 EQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKK 404
Query: 436 VNVVINFDFPKNAETYLHRVGRSGR 460
V+ VINFD P++ Y+HR+GR+GR
Sbjct: 405 VHTVINFDMPQSVTGYIHRIGRTGR 429
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 48/411 (11%)
Query: 95 QSEAVDSSSQDWKARLKI------PPADTRYKTEDVTAT---KGNEFEDYFLKRELLMGI 145
S+ D++S+ W R + R KT+D T F + +++ +
Sbjct: 330 HSKGSDTNSRGWGDRRSVVYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSEDMMKAL 389
Query: 146 YEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDN--------- 196
E+ F+RP+ IQ + + G + ++G+GKT A+ +P ++++ ++
Sbjct: 390 KEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSP 449
Query: 197 NVIQVVILVPTRELALQTSQVCKELGKH-LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGT 255
+V++LVPT ELA Q C+ + K + + MV TGG + + L Q V +L+ T
Sbjct: 450 GCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIAT 509
Query: 256 PGRILDLAKKGVCVLKDCSMLVMDEADKLLS-PEFQPSIQQLIQFLPRNRQILMFSATFP 314
PGR L +G+ L + ++DE D L EF+ ++Q LI P Q L +AT P
Sbjct: 510 PGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLP 569
Query: 315 VTVKD-----FKD-RFLHKP---YVINLMDELTL-------KGITQFYAFVEERQKVHCL 358
+ + + F D + P V N ++E + T AF + K L
Sbjct: 570 LEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAF---QNKKTAL 626
Query: 359 NTLFSKLQINQSIIFCNSVN---RVELLAKKI--TELGYSCFYIHAKMLQDHRNRVFHDF 413
+ + ++++IIFCN + +VE + K++ E HA + Q+ R +F
Sbjct: 627 LQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEF 686
Query: 414 RNGACRN----LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 460
+ LVCTD +RGID V+ V+ FDFP++ Y+ RVGR+ R
Sbjct: 687 TSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTAR 737
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 183/416 (43%), Gaps = 77/416 (18%)
Query: 141 LLMGIYEKGFERPSPIQEESIPIAL-TGSDILARAKNGTGKTAAFCIPALEKV-DQDNNV 198
L+ IY F+ P+ IQ+ +A G D++ A+ G+GKT AF +P L+++ D+ V
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 260
Query: 199 -------------------IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 239
++ +I+ PTRELALQ ++ + K+L ++V+ GG +
Sbjct: 261 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 320
Query: 240 DDIMRLYQPVHLLVGTPGRILDLAKKG---VCVLKDCSMLVMDEADKLLSPEFQPSIQQL 296
RL + ++V TPGR+ +L G + L S V+DEAD+++ +Q +
Sbjct: 321 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 380
Query: 297 IQFLP------------------------RNRQILMFSATFPVTVKDFKDRFLHKPYV-- 330
+ LP + RQ +FSAT ++ DF+ +
Sbjct: 381 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALS-SDFRKKLKRGSSKSK 439
Query: 331 ------INLMDELTLKG--------------------ITQFYAFVEERQKVHCLNTLFSK 364
+N ++ L+ + I + + EE++K L + S
Sbjct: 440 QSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV 499
Query: 365 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 424
++I+FC SV + ++ + LG + ++M Q R + FR L+ T
Sbjct: 500 HGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIAT 559
Query: 425 DLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 480
DL RGIDI+ V +I++ P +AE Y+HR GR+ R G ++ LI + Y
Sbjct: 560 DLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFY 615
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 90/442 (20%)
Query: 116 DTRYKTEDVTATKGN-----EFEDYFLKRELLMGIYEK-GFERPSPIQEESIPIALTGSD 169
+T+ + +D + K F L +L + E+ GFE P+ +Q ++IP+ L+G D
Sbjct: 10 ETKQEAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRD 69
Query: 170 ILARAKNGTGKTAAFCIPALE-------KVDQDNNVIQVVILVPTRELALQTSQVCKELG 222
+L A GTGKT A+ P + KVD+ + +VI VPTREL LQ + ++L
Sbjct: 70 VLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVI-VPTRELCLQVYETLEKLL 128
Query: 223 KHLKIQV-MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LAKKGVCVLKDCSMLVMDE 280
V GG + RL + + +L+ TPGR+LD L V K+ ++ DE
Sbjct: 129 HRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDE 188
Query: 281 ADKLLSPEFQPSIQQLIQFL--------------PRN--RQILMFSATFPVTVKDFKDRF 324
AD +L + I+Q+I+ L P+ +Q L+ SAT V D
Sbjct: 189 ADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLS 248
Query: 325 LHKPYVIN-----LMDELTLKG---------------------ITQFYA----FVEERQK 354
L P +I L L+++ +++ Y V+ +
Sbjct: 249 LDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLR 308
Query: 355 VHC----------LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY------------ 392
V C L LF + + ++F ++ + V+ ++E +
Sbjct: 309 VPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTK 368
Query: 393 ------SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK 446
F +H M Q+ R F F+ L+ TD+ RG+D V +I +D P
Sbjct: 369 ELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPG 428
Query: 447 NAETYLHRVGRSGRFGHLGLAV 468
A Y+HRVGR+ R G G A+
Sbjct: 429 EATEYVHRVGRTARIGEKGEAL 450
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 147/308 (47%), Gaps = 28/308 (9%)
Query: 137 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDN 196
L +++ + GFE +P+Q E+IP + D++ A G+GKT AF +P +E + + N
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 197 NV------IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVH 250
+ + VI+ PTREL+ Q +V + + V +L++ + +
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEE------EGAN 137
Query: 251 LLVGTPGRILDLAKKGVCV-LKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPRNRQILMF 309
LL+GTPGR+ D+ K+ + ++ +L++DEAD+LL FQ + +I LP+ R+ +F
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLF 197
Query: 310 SATFPVTVKDFKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQ 369
SAT V D L PY+ D+ K + +E + K L F
Sbjct: 198 SATQTQAVADLAKAGLRNPYLKCEADQ---KSSQLVHLLIENKNKK--LVVFF------- 245
Query: 370 SIIFCNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT 428
+ C V+ L+ KI L S F H KM Q R+ F + L+CTD+
Sbjct: 246 --MTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAA 303
Query: 429 RGIDIQAV 436
RG+DI +
Sbjct: 304 RGLDIPGI 311
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 157/376 (41%), Gaps = 33/376 (8%)
Query: 136 FLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQD 195
F+ +L + E GF P+ IQ E++P TG D + A+ G+GKT + + ++
Sbjct: 82 FVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQ 141
Query: 196 NNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTT------GGTSLKDDIMRLYQPV 249
+ +Q VI+VPTREL +Q ++V + L +I V T GGT + +P
Sbjct: 142 RSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPP 201
Query: 250 HLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQ-PSIQQLIQFLPR--NRQI 306
+LV T + + +K + + +LV+DE D L Q S+++L+ RQ
Sbjct: 202 AILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQT 261
Query: 307 LMFSATFPVTVKDFKDRFLHKPYVINLMDELTLKGITQF-------YAFVEERQKVHCLN 359
+ SA+ P K F + + + + + + I + E+ K L
Sbjct: 262 VFASASIP-QHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLL 320
Query: 360 TLFSKLQINQSIIFCN-------------SVNRVELLAKKITELGYSCFYIHAKMLQDHR 406
L +IIF S + K + + M + R
Sbjct: 321 ALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSR 380
Query: 407 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR---FGH 463
+ R G LV TD+ RGID+ + NFD P+ YLHR GR+GR
Sbjct: 381 AASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDR 440
Query: 464 LGLAVNLITYEDRFNL 479
+ NLIT E+RF L
Sbjct: 441 KCIVANLITSEERFVL 456
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 82/378 (21%)
Query: 169 DILARAKNGTGKTAAFCIPALEKV-DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKI 227
DI + G+GKT ++ +P ++ + + ++ ++++PTR+LALQ V + + +
Sbjct: 74 DICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGL 133
Query: 228 QVMVTTGGTSLKDDIMRL-----------YQP----------VHLLVGTPGRILDLAK-- 264
V G +S+ +I +L Y P V +LV TPGR++D
Sbjct: 134 SVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNT 193
Query: 265 KGVCVLKDCSMLVMDEADKLLSPEFQ---PSIQQLIQ------------FLPRNRQILMF 309
KG L+ LV+DE D+LL +Q P++ QL Q F+P F
Sbjct: 194 KGF-TLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPS-----AF 247
Query: 310 SATFPVTVKDFKDRFLHKPY--VINLMDELTLKG---------------ITQFYAFVEER 352
+ V + + F KPY ++ ++ TL +T +
Sbjct: 248 GSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLP 307
Query: 353 QKVHCLN-------------TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 399
+K+ CL L + + IIF +SV L K + G I A
Sbjct: 308 EKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDP--KIKA 365
Query: 400 K-----MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHR 454
K + Q R++ FR G + LV +D TRG+D++ V VIN+D P A+T++HR
Sbjct: 366 KEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHR 425
Query: 455 VGRSGRFGHLGLAVNLIT 472
GR+ R G G L++
Sbjct: 426 AGRTARAGQAGRCFTLLS 443
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 302 RNRQILMFSATFPVTVKD---------FKD------RFLHK--PYVINLMDELTLKGITQ 344
R++Q + +AT PV K F+D FLH+ P + E+T+ +Q
Sbjct: 351 RSKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVD--SQ 408
Query: 345 FYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 404
A +E + + ++++F N+V VE +A + + C+ H D
Sbjct: 409 VDALIEAVKNN-------NNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLD 461
Query: 405 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL 464
R + DFR VCTD RG+D+ V+ VI DF +A +LHR+GR+ R G
Sbjct: 462 ERANILADFRETGGV-FVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQY 520
Query: 465 GLAVNLITYEDR 476
G +L T +R
Sbjct: 521 GTVTSLYTEANR 532
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 121 TEDVTATKGNE--FEDYFLKRELL-------MGIYEKGFERPSPIQEESIPIALTGSDIL 171
TE KGN+ F D+ + + L + + + GF+RPS Q IP L+G D++
Sbjct: 62 TEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVI 121
Query: 172 ARAKNGTGKTAAFCIPALEKVDQ---DNNVIQ-----------VVILVPTRELALQTSQV 217
A+ G+GKT + P ++++ D+ V +IL P L Q ++
Sbjct: 122 VAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRM 181
Query: 218 CKEL----GKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAK----KGVCV 269
L G L ++V G D + ++V TP +L+ + + +
Sbjct: 182 VNGLVDEDGNPL-LRVEAVCGSQGWPDRLP------DIIVSTPAALLNNIEPKRNRRLEF 234
Query: 270 LKDCSMLVMDEADKLLSPEFQPSIQQLIQFL 300
L+ +V DEAD LL FQ I +LI L
Sbjct: 235 LRCVKYVVFDEADMLLCGSFQNQIIRLINML 265
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 45/329 (13%)
Query: 157 QEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTRELALQTSQ 216
Q E+I ++G D G GK+ + IPAL K ++LV + +AL +Q
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPG--------IVLVVSPLIALMENQ 92
Query: 217 VCKELGKHLKIQVMVTTGGTSLKDDI----------MRLYQPVHLLVGTPGRILDLAK-- 264
V K + + + +T T +K+ I +RL L+ T G +L L K
Sbjct: 93 VMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLH 152
Query: 265 -KGVCVLKDCSMLVMDEADKLLS--PEFQPSIQQLIQFLPR--NRQILMFSATF-PVTVK 318
+G+ +++ +DEA + S +F+PS +QL + +L +AT P K
Sbjct: 153 SRGLL-----NLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQK 207
Query: 319 DFKDRFLHKPYVINLMDELTLKG-ITQFYAFVEERQK------VHCLNTLFSKLQINQSI 371
D D +NL + L LK + F E R K L L +I
Sbjct: 208 DVIDS-------LNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAI 260
Query: 372 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 431
I+C + L+ ++ +G S HA + R+ V D+ + + +V T F GI
Sbjct: 261 IYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGI 320
Query: 432 DIQAVNVVINFDFPKNAETYLHRVGRSGR 460
D + V +V +F+ PK+ E++ GR+GR
Sbjct: 321 DKKDVRMVCHFNIPKSMESFYQESGRAGR 349
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 139/335 (41%), Gaps = 33/335 (9%)
Query: 149 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQVVILVPTR 208
G + Q+E I +TG D+L G GK+ + +PA+ + LV +
Sbjct: 86 GISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGG--------TTLVVSP 137
Query: 209 ELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP----VHLLVGTPGRILDLAK 264
L+L QV + ++ +T G + + + + + +L TP ++ +K
Sbjct: 138 LLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV-SKSK 196
Query: 265 KGVCVLKDC------SMLVMDEAD--KLLSPEFQPSIQQLIQFLPRNRQILMFSATFPVT 316
+ + L+ C S++ +DEA +F+P + L + ++ M + T T
Sbjct: 197 RFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATAT 256
Query: 317 VKDFKD--RFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCL------NTLFSKLQIN 368
K D LH P + + + + FY+ V E+ V L + N
Sbjct: 257 QKVQNDLIEMLHIPKCVKFVSSVNRPNL--FYS-VREKSAVGKLVVDEIAEFIRESYSNN 313
Query: 369 QS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 427
+S I++C S E +A + E G S Y HA M + R +V + + +V T F
Sbjct: 314 ESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAF 373
Query: 428 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFG 462
GI+ V VI+ K+ ETY GR+GR G
Sbjct: 374 GMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 408
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 114/300 (38%), Gaps = 33/300 (11%)
Query: 212 LQTSQVCKELGKHLKIQVMVTT------GGTSLKDDIMRLYQPVHLLVGTPGRILDLAKK 265
+Q ++V + L +I V T GGT + +P +LV T + + +K
Sbjct: 1 MQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEK 60
Query: 266 GVCVLKDCSMLVMDEADKLLSPEFQ-PSIQQLIQFLPR--NRQILMFSATFPVTVKDFKD 322
+ + +LV+DE D L Q S+++L+ RQ + SA+ P K F
Sbjct: 61 HIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIP-QHKHFVH 119
Query: 323 RFLHKPYVINLMDELTLKGITQF-------YAFVEERQKVHCLNTLFSKLQINQSIIFCN 375
+ + + + + + I + E+ K L L +IIF
Sbjct: 120 DCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVG 179
Query: 376 -------------SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 422
S + K + + M + R + R G LV
Sbjct: 180 EQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLV 239
Query: 423 CTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR---FGHLGLAVNLITYEDRFNL 479
TD+ RGID+ + NFD P+ YLHR GR+GR + NLIT E+RF L
Sbjct: 240 STDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVL 299
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 69/358 (19%)
Query: 155 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL--------------EKVDQDNNVIQ 200
P Q E I ++GSD+ G GK+ + +PAL DQ N++Q
Sbjct: 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMNLLQ 515
Query: 201 VVILVPTRELALQTSQ---VCKEL-GKHLKIQVM-VTTGGTSLKDDIMRLYQPVHLLVGT 255
I + ++ ++ + +EL +H K +++ VT + D ++R
Sbjct: 516 ANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLR----------- 564
Query: 256 PGRILDLAKKGVCVLKDCSMLVMDEAD--KLLSPEFQPSIQQL---IQFLPRNRQILMFS 310
+ +L +G+ + V+DEA +F+P Q L Q P N +L +
Sbjct: 565 --HLENLNSRGLL-----ARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFP-NIPVLALT 616
Query: 311 ATFPVTVKD-------------FKDRFLHKPYVINLMDELTLKGITQFYAFVEERQKVHC 357
AT +VK+ F+ F ++P + + T K + F++E C
Sbjct: 617 ATATASVKEDVVQALGLVNCVVFRQSF-NRPNLWYSVVPKTKKCLEDIDKFIKENHFDEC 675
Query: 358 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 417
II+C S E +++++ E G+ + H M + R + +
Sbjct: 676 ------------GIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDE 723
Query: 418 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYED 475
+ T F GI+ V VI+ PK+ E Y GR+GR G V Y D
Sbjct: 724 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGD 781
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 223 KHLKIQVMVTTGGTSLKDDI----------MRLYQPVHLLVGTPGRILDLAK---KGVCV 269
K + + + +T T +K+ I +RL L+ T G +L L K +G+
Sbjct: 6 KGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLL- 64
Query: 270 LKDCSMLVMDEADKLLS--PEFQPSIQQLIQFLPR--NRQILMFSATF-PVTVKDFKDRF 324
+++ +DEA + S +F+PS +QL + +L +AT P KD D
Sbjct: 65 ----NLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDS- 119
Query: 325 LHKPYVINLMDELTLKG-ITQFYAFVEERQK------VHCLNTLFSKLQINQSIIFCNSV 377
+NL + L LK + F E R K L L +II+C
Sbjct: 120 ------LNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLER 173
Query: 378 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVN 437
+ L+ ++ +G S HA + R+ V D+ + + +V T F GID + V
Sbjct: 174 TTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVR 233
Query: 438 VVINFDFPKNAETYLHRVGRSGR 460
+V +F+ PK+ E++ GR+GR
Sbjct: 234 MVCHFNIPKSMESFYQESGRAGR 256
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 249 VHLLVGTPGRILDLAKKGVCVLKDC------SMLVMDEAD--KLLSPEFQPSIQQLIQFL 300
+ +L TP ++ +K+ + L+ C S++ +DEA +F+P + L
Sbjct: 57 LKILYVTPEKV-SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILK 115
Query: 301 PRNRQILMFSATFPVTVKDFKD--RFLHKPYVINLMDELTLKGITQFYAFVEERQKVHCL 358
+ ++ M + T T K D LH P + + + + FY+ V E+ V L
Sbjct: 116 TQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNL--FYS-VREKSAVGKL 172
Query: 359 ------NTLFSKLQINQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFH 411
+ N+S I++C S E +A + E G S Y HA M + R +V
Sbjct: 173 VVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHM 232
Query: 412 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFG 462
+ + +V T F GI+ V VI+ K+ ETY GR+GR G
Sbjct: 233 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 283
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 366 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 425
+I I++C ++++K + + + H+ + R R+ F + R +V T
Sbjct: 485 EIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATV 544
Query: 426 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLG 465
F G+D V VI+F P + E Y+ +GR+GR G L
Sbjct: 545 AFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLS 584
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 153/423 (36%), Gaps = 76/423 (17%)
Query: 85 SNGDEVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKRELLMG 144
S+G E + SE +D + + D ++ + D TK E
Sbjct: 419 SSGSEEREQSVSEVIDVTDTE-------SSNDKKWTSSDFPWTKNLE------------- 458
Query: 145 IYEK---GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKVDQDNNVIQV 201
+Y K G P Q E I ++G D+ G GK+ + +PAL +
Sbjct: 459 VYNKLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPAL--------LCAG 510
Query: 202 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQ------PVHLLVGT 255
+ LV + ++L Q+ L I + G + + L + LL T
Sbjct: 511 ITLVISPLVSLIQDQIMNLL--QTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVT 568
Query: 256 PGRILDLAK--KGVCVLKDCSML---VMDEADKL--LSPEFQPSIQQL---IQFLPRNRQ 305
P ++ + + +L S+L V+DEA + +F+P Q L Q P N
Sbjct: 569 PEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFP-NIP 627
Query: 306 ILMFSATFPVTVKD-------------FKDRFLHKPYVINLMDELTLKGITQFYAFVEER 352
+L +AT +VK+ F+ F ++P + + T K + F+ E
Sbjct: 628 MLALTATATTSVKEDVVQALGLVNCVVFRQSF-NRPNLWYSVVPKTNKCLEDIDKFIREN 686
Query: 353 QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHD 412
C II+C S E + + + G+ + H M R V
Sbjct: 687 HFDEC------------GIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQ 734
Query: 413 FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 472
+ + T F GI+ V VI+ PK+ E Y GR+GR G V +
Sbjct: 735 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 794
Query: 473 YED 475
Y D
Sbjct: 795 YTD 797