Miyakogusa Predicted Gene
- Lj0g3v0273199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0273199.1 CUFF.18065.1
(310 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 78 9e-15
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 70 2e-12
AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 5e-12
AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 6e-12
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 68 1e-11
AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 67 1e-11
AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 67 2e-11
AT3G54910.3 | Symbols: | RNI-like superfamily protein | chr3:20... 67 2e-11
AT3G54910.2 | Symbols: | RNI-like superfamily protein | chr3:20... 67 2e-11
AT3G54910.1 | Symbols: | RNI-like superfamily protein | chr3:20... 67 2e-11
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 66 3e-11
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 66 3e-11
AT5G56700.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 65 5e-11
AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 65 6e-11
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 64 1e-10
AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 64 1e-10
AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 64 2e-10
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 3e-10
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 3e-10
AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 6e-10
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 6e-10
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 59 5e-09
AT1G05080.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 5e-09
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 6e-09
AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein | c... 58 7e-09
AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein | c... 58 7e-09
AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein | c... 58 7e-09
AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 7e-09
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 58 9e-09
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 9e-09
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 2e-08
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 3e-08
AT5G56410.1 | Symbols: | Protein with RNI-like/FBD-like domains... 56 4e-08
AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains... 56 4e-08
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 55 4e-08
AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 5e-08
AT3G10750.1 | Symbols: | FBD domain family | chr3:3366927-33682... 54 1e-07
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 1e-07
AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 54 1e-07
AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 1e-07
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 1e-07
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 1e-07
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT3G59180.1 | Symbols: | Protein with RNI-like/FBD-like domains... 54 2e-07
AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 2e-07
AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 2e-07
AT5G52460.1 | Symbols: EDA41 | FBD, F-box and Leucine Rich Repea... 53 3e-07
AT1G64540.1 | Symbols: | F-box/FBD-like domains containing prot... 53 3e-07
AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 4e-07
AT4G10410.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 52 4e-07
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 4e-07
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 52 4e-07
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 5e-07
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 5e-07
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 5e-07
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 6e-07
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 7e-07
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 9e-07
AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 51 1e-06
AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 50 2e-06
AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 50 2e-06
AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 2e-06
AT1G56610.2 | Symbols: | Protein with RNI-like/FBD-like domains... 50 2e-06
AT1G56610.3 | Symbols: | Protein with RNI-like/FBD-like domains... 50 3e-06
AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 3e-06
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 4e-06
AT1G56610.1 | Symbols: | Protein with RNI-like/FBD-like domains... 49 5e-06
AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 5e-06
AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 5e-06
AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 6e-06
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 7e-06
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 7e-06
AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein | c... 48 8e-06
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 1e-05
>AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22838836-22840353
REVERSE LENGTH=439
Length = 439
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 136/340 (40%), Gaps = 74/340 (21%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQ 95
Y F +F+ R++ +R+ T F L+ G + D+ WV AV+RGL L ++
Sbjct: 63 YGNFRRFVDRSLLSREGRVLQTLF-LKLGR-QCSYDDIAIWVGIAVKRGLMELKLKYTDS 120
Query: 96 IFPKL--IKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLS 153
+PK + +++C+TLVVLKL +DV V L SLKTL L + + ++ LL+
Sbjct: 121 YYPKRSSLPRSLYTCETLVVLKLKKGYLDVPDLVCLRSLKTLSLRDMNYSNASCLLRLLA 180
Query: 154 GCPILEYMHLSRMRYADCSSPSNTNVKSLTKL-----------------VSADISFIGFE 196
CP+LE + + + Y C+ + L KL VS IS + +
Sbjct: 181 SCPVLEELFIQQGYYDSCALSFKIILPCLKKLSYLPKRKKKYSGIDRSEVSGGISGLVLD 240
Query: 197 IP-------------------------LKVICNVEFLRIDKYPYEIPVFPNLTHLELMMS 231
P +K V R +K Y + ++ H+ L +S
Sbjct: 241 APSLKYLHIVDRSGLFSVSEIININAVVKATLEVNASRPEKLLYSL---VSVEHIRLCLS 297
Query: 232 --------GIGMNWHLV------------LAMXXXXXXXXXXXXDMKASSTHDMV----- 266
G+G ++H + L + D+K + H +
Sbjct: 298 ATEVVYPVGLGSSFHKLKRLEVCTCKSEWLDLFIHLLEDSPSLQDIKINQCHPVTNPRPQ 357
Query: 267 WTSPFNDPECLSSQLRKCSITNYKGTKSELHFATYIMQSS 306
W P + P CLSS L Y GT E +TY+ +++
Sbjct: 358 WNQPGSVPRCLSSSLETLEWVEYGGTHEEKELSTYLFKTA 397
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI-QLFYQIFPKLIKSCIFSCK 109
H P I +FRL SHF D+ WV AV R + L I Y ++ S +++CK
Sbjct: 70 HRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCK 129
Query: 110 TLVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRY 168
+LV+LKL G+ +DV V LPSLKTL+L + + + + LL CP+LE + + +R
Sbjct: 130 SLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLFVLLLRC 189
Query: 169 ADCS-----SPSNTNVKSLTKLVSADISFIGFEIPLKVICNVEFLRI-----DKYPYEIP 218
D PS ++ L+ +S + GF I L +E+ ++ D++PY I
Sbjct: 190 DDIGMFIVIVPS---LQRLSLYLSPRCNLEGFVIVLDT--PLEYFKLVDRNYDRHPYMIE 244
Query: 219 VFPNLT 224
P LT
Sbjct: 245 NMPKLT 250
>AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452066-15453455
REVERSE LENGTH=410
Length = 410
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 38 GFSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQI 96
G FI++ + H P I + R S D+ RW+ AV R + +L I F +
Sbjct: 58 GLRDFIHKNLPL--HRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE- 114
Query: 97 FPKLIKSCIFSCKTLVVLKLFGLNV-DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGC 155
+ S F+CK+LV LKL + + D+ S V LPSLKTL L + F E + + ELLS C
Sbjct: 115 NENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSIC 174
Query: 156 PILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADISF 192
P+LE + + Y D N K LT +V + +S
Sbjct: 175 PVLEDLSV----YCD----DYENTKELTIVVPSLLSL 203
>AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452586-15453455
REVERSE LENGTH=289
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 38 GFSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQI 96
G FI++ + H P I + R S D+ RW+ AV R + +L I F +
Sbjct: 58 GLRDFIHKNLPL--HRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE- 114
Query: 97 FPKLIKSCIFSCKTLVVLKLFGLNV-DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGC 155
+ S F+CK+LV LKL + + D+ S V LPSLKTL L + F E + + ELLS C
Sbjct: 115 NENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQELLSIC 174
Query: 156 PILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADISF 192
P+LE + + Y D N K LT +V + +S
Sbjct: 175 PVLEDLSV----YCD----DYENTKELTIVVPSLLSL 203
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 26 DRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGL 85
D SY I Y FS+F+ R+ D Q + T + G + D+ W+ +A + L
Sbjct: 47 DDSYQAIE--YGSFSRFVDRSFTLHDA-QVLDTLHFKLGKTSCGTGDIRVWIKTAEKSCL 103
Query: 86 ENLYIQLFYQ-------IFPKLIKSCIFSCKTLVVLKLF-GLNVDVFSFVHLPSLKTLQL 137
L I++ + P+ + +C C+ LV LKL + VD S PSLKTL L
Sbjct: 104 RELIIEIDKSNSDNSSVVLPRSLYTC---CRMLVTLKLNNAVLVDATSSFSFPSLKTLSL 160
Query: 138 YCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSS 173
+ FP + + LLS CP+LE + + R Y + ++
Sbjct: 161 VSMKFPGDELIKMLLSNCPVLEDLVVKRCPYDNVTT 196
>AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22939723-22941099
FORWARD LENGTH=402
Length = 402
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 29 YLIINRSYNGFSKF-IYRTMRNRD---HHQPIT---TFRLQCGSSHFNLSDVNRWVNSAV 81
Y I +N S F YR ++ H PI + +CG+ D+ WV AV
Sbjct: 49 YDDITDGFNSVSAFQTYRDFIAKNLPLHRAPIIESLSLGFRCGT--LQPEDLKSWVEVAV 106
Query: 82 QRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFV-HLPSLKTLQLYCL 140
R + L I +Y+ L S +++CK+LV LK F + VDV V LPSL+TL+L +
Sbjct: 107 SRSVRELSILAYYRNNYALSSSSLYTCKSLVTLKGFNIRVDVPPTVCLLPSLRTLELKRV 166
Query: 141 IFPEPQYVMELLSGCPILEYMHLSR 165
+ + LLS CP+LEY+ + R
Sbjct: 167 RYLNEDSLRMLLSFCPVLEYLSIER 191
>AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22899724-22901985
FORWARD LENGTH=607
Length = 607
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 34 RSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLF 93
+S+ F F+Y + + D Q + L+ + ++ SD+N WV AV R + L I LF
Sbjct: 58 KSFETFMSFVYGSFLSNDA-QILDRLHLKL-NQKYSASDINFWVQVAVNRSVRELRIDLF 115
Query: 94 YQIFPKLIKSCIFSCKTLVVLKLFGLNVDVF-SFVHLPSLKTLQLYCLIFPEPQYVMELL 152
+ + C+ SC TL L L L + V ++ LPSLKTL L + F +V +L
Sbjct: 116 GKTLE--LPCCLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASIL 173
Query: 153 SGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADISFIGFEIPLKVICNVEFLRIDK 212
CP+LE + + + + P N +V +L L + E+ K +
Sbjct: 174 RICPVLERLVVDGTKGVNVKIP-NMDVPNLRSLSFRSTGELRIELLRKTL---------G 223
Query: 213 YPYEIPVFPNLTHLELMMSGIGMN 236
P + F NLT EL++ G+G+
Sbjct: 224 LPTCLSSFRNLT--ELILHGLGIK 245
>AT3G54910.3 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 54/307 (17%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPK---LIKSCIFS 107
H P I +FRL S ++ WV AV L L ++ Y +P+ ++ S +++
Sbjct: 30 HRAPVIESFRLYLIDSKCTPENIKMWVVIAVSHCLREL--EVIYSSYPEKPNILPSNLYT 87
Query: 108 CKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCP---------- 156
CK+LV+L+L G + +DV LPSLKTLQL+ + + + LLS CP
Sbjct: 88 CKSLVILELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLL 147
Query: 157 -------------------------------ILEYMHLSRMRYADCSSPSN-TNVKSLTK 184
++E L + D +S S+ VK++
Sbjct: 148 LSDSMEKLTVVVPSLQILSLFIPHSYEIDGIVIETPSLKYFKLIDHNSKSHYCLVKNMPN 207
Query: 185 LVSADISFIGFEIP--LKVICNVEFLRI-DKYPYEIP-VFPNLTHLELMMSGIGMNWHLV 240
L+ ADI I + I +V+ L I + Y+ VF L HL+L + LV
Sbjct: 208 LIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLV 267
Query: 241 LAMXXXXXXXXXXXXDMKASSTHDMV-WTSPFNDPECLSSQLRKCSITNYKGTKSELHFA 299
+ +M HD++ W P PEC+ L+ +++ Y+GT E A
Sbjct: 268 RLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECMLLSLQTLNLSAYRGTPEERDLA 327
Query: 300 TYIMQSS 306
Y ++++
Sbjct: 328 VYFLKNA 334
>AT3G54910.2 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 54/307 (17%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPK---LIKSCIFS 107
H P I +FRL S ++ WV AV L L ++ Y +P+ ++ S +++
Sbjct: 30 HRAPVIESFRLYLIDSKCTPENIKMWVVIAVSHCLREL--EVIYSSYPEKPNILPSNLYT 87
Query: 108 CKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCP---------- 156
CK+LV+L+L G + +DV LPSLKTLQL+ + + + LLS CP
Sbjct: 88 CKSLVILELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLL 147
Query: 157 -------------------------------ILEYMHLSRMRYADCSSPSN-TNVKSLTK 184
++E L + D +S S+ VK++
Sbjct: 148 LSDSMEKLTVVVPSLQILSLFIPHSYEIDGIVIETPSLKYFKLIDHNSKSHYCLVKNMPN 207
Query: 185 LVSADISFIGFEIP--LKVICNVEFLRI-DKYPYEIP-VFPNLTHLELMMSGIGMNWHLV 240
L+ ADI I + I +V+ L I + Y+ VF L HL+L + LV
Sbjct: 208 LIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLV 267
Query: 241 LAMXXXXXXXXXXXXDMKASSTHDMV-WTSPFNDPECLSSQLRKCSITNYKGTKSELHFA 299
+ +M HD++ W P PEC+ L+ +++ Y+GT E A
Sbjct: 268 RLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECMLLSLQTLNLSAYRGTPEERDLA 327
Query: 300 TYIMQSS 306
Y ++++
Sbjct: 328 VYFLKNA 334
>AT3G54910.1 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 54/307 (17%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPK---LIKSCIFS 107
H P I +FRL S ++ WV AV L L ++ Y +P+ ++ S +++
Sbjct: 30 HRAPVIESFRLYLIDSKCTPENIKMWVVIAVSHCLREL--EVIYSSYPEKPNILPSNLYT 87
Query: 108 CKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCP---------- 156
CK+LV+L+L G + +DV LPSLKTLQL+ + + + LLS CP
Sbjct: 88 CKSLVILELCGEIRLDVPRMAFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLL 147
Query: 157 -------------------------------ILEYMHLSRMRYADCSSPSN-TNVKSLTK 184
++E L + D +S S+ VK++
Sbjct: 148 LSDSMEKLTVVVPSLQILSLFIPHSYEIDGIVIETPSLKYFKLIDHNSKSHYCLVKNMPN 207
Query: 185 LVSADISFIGFEIP--LKVICNVEFLRI-DKYPYEIP-VFPNLTHLELMMSGIGMNWHLV 240
L+ ADI I + I +V+ L I + Y+ VF L HL+L + LV
Sbjct: 208 LIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFNQLKHLKLCRCKGHSSDLLV 267
Query: 241 LAMXXXXXXXXXXXXDMKASSTHDMV-WTSPFNDPECLSSQLRKCSITNYKGTKSELHFA 299
+ +M HD++ W P PEC+ L+ +++ Y+GT E A
Sbjct: 268 RLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECMLLSLQTLNLSAYRGTPEERDLA 327
Query: 300 TYIMQSS 306
Y ++++
Sbjct: 328 VYFLKNA 334
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI-QLFYQIFPKLIKSCIFSCK 109
H P I +FRL SHF D+ WV AV R + L I Y ++ S +++CK
Sbjct: 70 HRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCK 129
Query: 110 TLVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILE 159
+LV+LKL G+ +DV V LPSLKTL+L + + + + LL CP+LE
Sbjct: 130 SLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLE 180
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI-QLFYQIFPKLIKSCIFSCK 109
H P I +FRL SHF D+ WV AV R + L I Y ++ S +++CK
Sbjct: 70 HRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCK 129
Query: 110 TLVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILE 159
+LV+LKL G+ +DV V LPSLKTL+L + + + + LL CP+LE
Sbjct: 130 SLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLE 180
>AT5G56700.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr5:22941991-22943378 FORWARD
LENGTH=360
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 14/141 (9%)
Query: 63 CG---SSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGL 119
CG SS + D+ WV AV R + L I L + S +++CK+LV LKL+G
Sbjct: 39 CGCPNSSSTLVMDLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKLYGK 98
Query: 120 NV--DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNT 177
V DV V LPSLKTLQL L + + + LLS CP+LE + + R Y
Sbjct: 99 KVLLDVPRTVFLPSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVREDY--------D 150
Query: 178 NVKSLTKLVSADISFIGFEIP 198
N+++L +V + + + EIP
Sbjct: 151 NLRALVVIVPS-LQRLSLEIP 170
>AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7538192-7539685
REVERSE LENGTH=443
Length = 443
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 56 ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLK 115
I +L + S + +W+++AV+R +++L I + + +LI +++C+TLV L+
Sbjct: 82 IHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYLGQELIPHSLYTCETLVSLR 141
Query: 116 LFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
L +++ F V LP LKT+ L I+P + L+S CP+LE +++SR
Sbjct: 142 LHNVSLPDFDHVSLPRLKTMHLIDNIYPNDALLENLISSCPVLEDLNVSR 191
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 56 ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLF------YQIFPKLIKSCIFSCK 109
I + L+ F D+ W A+ L L I F Y I P+ +++CK
Sbjct: 68 IESLYLRFRRESFLFQDIKLWGGIAISHCLRELRIDFFSHYANPYVILPR----SLYTCK 123
Query: 110 TLVVLKLFGLN--VDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMR 167
+LV LKL GL VDV V LPSLKTL L C+ + E + LLS CP+LE + +
Sbjct: 124 SLVTLKLLGLGIRVDVPRDVCLPSLKTLLLQCVAYSEEDPLRLLLSCCPVLEDLVIEL-- 181
Query: 168 YADCSSPSNTNVKSLTKLVSADISFIGFEIP 198
+N NVK+L +V + + +IP
Sbjct: 182 -----DDANQNVKALVVIVPT-LQCLSLKIP 206
>AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452196-11453584
REVERSE LENGTH=405
Length = 405
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 54 QPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENL---YIQLFYQIFPKLI---KSCIFS 107
Q I +F LQC SS F D+ WV + + R + L Y L + P ++ + +++
Sbjct: 71 QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKPVVLLDLPNSLYT 130
Query: 108 CKTLVVLKLFG--LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
C +LV LKL G + VDV V LP LKTL+L + + + + LLS CP+LE + + R
Sbjct: 131 CTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEESLRLLLSYCPVLEDLTIHR 190
Query: 166 MRYADCSSPSNTNVKSLTKLVSA 188
+ NVK+L +V +
Sbjct: 191 --------DMHDNVKTLVIIVPS 205
>AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452421-11453584
REVERSE LENGTH=355
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 54 QPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENL---YIQLFYQIFPKLI---KSCIFS 107
Q I +F LQC SS F D+ WV + + R + L Y L + P ++ + +++
Sbjct: 71 QVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKPVVLLDLPNSLYT 130
Query: 108 CKTLVVLKLFG--LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
C +LV LKL G + VDV V LP LKTL+L + + + + LLS CP+LE + + R
Sbjct: 131 CTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAYSNEESLRLLLSYCPVLEDLTIHR 190
Query: 166 MRYADCSSPSNTNVKSLTKLVSA 188
+ NVK+L +V +
Sbjct: 191 --------DMHDNVKTLVIIVPS 205
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 137/345 (39%), Gaps = 67/345 (19%)
Query: 24 LPDRSYLII--NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAV 81
+P Y +I N + F +F+ R++ + + L+ G + D+ WV AV
Sbjct: 41 VPKLQYSLIDKNADHGTFVRFVDRSLL-LSMAPVLESLHLKLGRQCSEV-DIGFWVRIAV 98
Query: 82 QRGLENL-YIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSF-VHLPSLKTLQLYC 139
++GL L + Y+ P + +F+C TL VLKL +++ F V LKTL L
Sbjct: 99 EKGLCELDFDYEHYKTEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEY 158
Query: 140 LIFPEPQYVMELLSGCPILEYMHLSRM------------------RYADCSSPSNTNVKS 181
+IF + + +LLS CPILE L+R R+ C V +
Sbjct: 159 VIFLDKETPQKLLSSCPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVMN 218
Query: 182 LTKLVSADISFIGFE-----IP------LKVICNVE------------FLRIDKYPYEIP 218
L +S G+E +P ++V C+ + L + P E+P
Sbjct: 219 TPSLKYLKLSGCGYECMIGNLPEIVEAHVEVACSTDDILTSLASVKRLLLCLPTEP-ELP 277
Query: 219 ---VFPNLTHLELMMSGIGMNWHLVLAMXXXXXXXXXXXXDMKASSTHDMV--------- 266
+F L HLE W +++ M +K + TH
Sbjct: 278 TGTIFHQLEHLEF--CSCCTEWDILMFM----LKHSPKLRSLKLNETHGYTIVSQSDPMF 331
Query: 267 -WTSPFNDPECLSSQLRKCSITNYKGTKSELHFATYIMQSSRVLQ 310
W P + PE L L NY+G K E A+++++ SR L+
Sbjct: 332 HWEEPSSVPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLK 376
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 137/345 (39%), Gaps = 67/345 (19%)
Query: 24 LPDRSYLII--NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAV 81
+P Y +I N + F +F+ R++ + + L+ G + D+ WV AV
Sbjct: 41 VPKLQYSLIDKNADHGTFVRFVDRSLL-LSMAPVLESLHLKLGRQCSEV-DIGFWVRIAV 98
Query: 82 QRGLENL-YIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSF-VHLPSLKTLQLYC 139
++GL L + Y+ P + +F+C TL VLKL +++ F V LKTL L
Sbjct: 99 EKGLCELDFDYEHYKTEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEY 158
Query: 140 LIFPEPQYVMELLSGCPILEYMHLSRM------------------RYADCSSPSNTNVKS 181
+IF + + +LLS CPILE L+R R+ C V +
Sbjct: 159 VIFLDKETPQKLLSSCPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVMN 218
Query: 182 LTKLVSADISFIGFE-----IP------LKVICNVE------------FLRIDKYPYEIP 218
L +S G+E +P ++V C+ + L + P E+P
Sbjct: 219 TPSLKYLKLSGCGYECMIGNLPEIVEAHVEVACSTDDILTSLASVKRLLLCLPTEP-ELP 277
Query: 219 ---VFPNLTHLELMMSGIGMNWHLVLAMXXXXXXXXXXXXDMKASSTHDMV--------- 266
+F L HLE W +++ M +K + TH
Sbjct: 278 TGTIFHQLEHLEF--CSCCTEWDILMFM----LKHSPKLRSLKLNETHGYTIVSQSDPMF 331
Query: 267 -WTSPFNDPECLSSQLRKCSITNYKGTKSELHFATYIMQSSRVLQ 310
W P + PE L L NY+G K E A+++++ SR L+
Sbjct: 332 HWEEPSSVPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLK 376
>AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24713306-24714843 REVERSE LENGTH=453
Length = 453
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 14/140 (10%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVN----RWVNSAVQRGLENLYIQ 91
++ + FI R MR+ ++ + F+L+CGS D+ +W+ A++R ++++ +
Sbjct: 81 FDSLASFIDRFMRS---NRKVNKFKLRCGSDLDGDVDLATCSWKWIYMAIKRKVQHIDVT 137
Query: 92 L-FYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVME 150
+I+P+ I++C++LV LKL + + FV LPSLK L L + F
Sbjct: 138 WPGVRIYPE-----IYNCESLVSLKLSEVTLTKPEFVSLPSLKVLVLDWVEFYNEFAFDM 192
Query: 151 LLSGCPILEYMHLSRMRYAD 170
L+SGCP+LE L R RY D
Sbjct: 193 LMSGCPVLESFTLCR-RYLD 211
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 15/139 (10%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFN---LSDVNRWVNSAVQRGLENLYI-- 90
+N F +F+ M + + +FRL+ SS + L+ + RW+NS V R ++ L +
Sbjct: 77 HNTFLRFVDSFM-GFNSQSCLQSFRLEYDSSGYGEPKLALIRRWINSVVSRKVKYLGVLD 135
Query: 91 ----QLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQ 146
+++ P L ++C+TLV L L GL++ FV LPSLK L L + F +
Sbjct: 136 DSCDNYEFEMPPTL-----YTCETLVYLTLDGLSLASPKFVSLPSLKELHLSIVKFADHM 190
Query: 147 YVMELLSGCPILEYMHLSR 165
+ L+S CP+LE ++++R
Sbjct: 191 ALETLISQCPVLENLNINR 209
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F F+ R + + + P+ F L+ G + + W+N+ ++RG+ +L + L +
Sbjct: 70 FMDFVDRVLALQ-GNSPLHKFSLKIGDG-IDPVRIIPWINNVLERGVSDLDLHLNLE-SE 126
Query: 99 KLIKSCIFSCKTLVVLKL-FGL--NVDVFSFVHLPSLKTLQLYCLIFPEPQY-VMELLSG 154
L+ S ++ CKTLV LKL FGL +DV VHLP LKTL + F E + +LLSG
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTIDVED-VHLPKLKTLYIEATHFEEHGVGLTKLLSG 185
Query: 155 CPILEYMHLSRMRY 168
CP+LE + L + +
Sbjct: 186 CPMLEDLVLDDISW 199
>AT1G05080.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:1459091-1460579
FORWARD LENGTH=439
Length = 439
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 72 DVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLP 130
D+ +WV AV + L I+L + P + ++SC +L L L + V+V S +LP
Sbjct: 103 DIGKWVAKAVDCLVMTLTIKLLWSAGPTSLPKSLYSCTSLSELTLSDQILVNVPSSAYLP 162
Query: 131 SLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
SL L+L C+++ + ++ LS CP+LE++ + R
Sbjct: 163 SLTELELICVVYKDEDSLVSFLSSCPVLEFLFVLR 197
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F F+ R + + + P+ F L+ G + + W+N+ ++RG+ +L + L +
Sbjct: 70 FMDFVDRVLALQGN-SPLHKFSLKIGDG-IDPVRIIPWINNVLERGVSDLDLHLNLE-SE 126
Query: 99 KLIKSCIFSCKTLVVLKL-FGL--NVDVFSFVHLPSLKTLQLYCLIFPEPQY-VMELLSG 154
L+ S ++ CKTLV LKL FGL +DV VHLP LKTL + F E + +LLSG
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTIDVED-VHLPKLKTLYIEATHFEEHGVGLTKLLSG 185
Query: 155 CPILEYMHLSRMRY 168
CP+LE + L + +
Sbjct: 186 CPMLEDLVLDDISW 199
>AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 33 NRSYNGFSKFIYRTM--RNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI 90
++ F F+ R + R +DH I F L+CG DV W+ + ++ G+ +L +
Sbjct: 65 DQDQTSFIDFVDRVLKLRGKDH---INKFSLKCGDG-IEDEDVFPWILNTLRHGVSDLSL 120
Query: 91 QLFYQIFPKLI---KSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPE 144
+ P L+ S +F+ KTLV LK+ G V + + V LP LKTL L ++F E
Sbjct: 121 H----VSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN-VCLPKLKTLNLDSVVFEE 175
Query: 145 PQY-VMELLSGCPILEYMHLSRM---RYADCSSPS 175
+ +LLSGCP+LE + L + R+ CS S
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSS 210
>AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 33 NRSYNGFSKFIYRTM--RNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI 90
++ F F+ R + R +DH I F L+CG DV W+ + ++ G+ +L +
Sbjct: 65 DQDQTSFIDFVDRVLKLRGKDH---INKFSLKCGDG-IEDEDVFPWILNTLRHGVSDLSL 120
Query: 91 QLFYQIFPKLI---KSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPE 144
+ P L+ S +F+ KTLV LK+ G V + + V LP LKTL L ++F E
Sbjct: 121 H----VSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN-VCLPKLKTLNLDSVVFEE 175
Query: 145 PQY-VMELLSGCPILEYMHLSRM---RYADCSSPS 175
+ +LLSGCP+LE + L + R+ CS S
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSS 210
>AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 33 NRSYNGFSKFIYRTM--RNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI 90
++ F F+ R + R +DH I F L+CG DV W+ + ++ G+ +L +
Sbjct: 65 DQDQTSFIDFVDRVLKLRGKDH---INKFSLKCGDG-IEDEDVFPWILNTLRHGVSDLSL 120
Query: 91 QLFYQIFPKLI---KSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPE 144
+ P L+ S +F+ KTLV LK+ G V + + V LP LKTL L ++F E
Sbjct: 121 H----VSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN-VCLPKLKTLNLDSVVFEE 175
Query: 145 PQY-VMELLSGCPILEYMHLSRM---RYADCSSPS 175
+ +LLSGCP+LE + L + R+ CS S
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSS 210
>AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 33 NRSYNGFSKFIYRTM--RNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYI 90
++ F F+ R + R +DH I F L+CG DV W+ + ++ G+ +L +
Sbjct: 65 DQDQTSFIDFVDRVLKLRGKDH---INKFSLKCGDG-IEDEDVFPWILNTLRHGVSDLSL 120
Query: 91 QLFYQIFPKLI---KSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPE 144
+ P L+ S +F+ KTLV LK+ G V + + V LP LKTL L ++F E
Sbjct: 121 H----VSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN-VCLPKLKTLNLDSVVFEE 175
Query: 145 PQY-VMELLSGCPILEYMHLSRM---RYADCSSPS 175
+ +LLSGCP+LE + L + R+ CS S
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSS 210
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 33 NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNL--SDVNRWVNSAVQRGLENLYI 90
N Y G F+ R + + D I +L+ + S N+WV+S V RG+++L
Sbjct: 54 NFRYKGLKGFVNRFL-DLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHL-- 110
Query: 91 QLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVME 150
P + I C+TLV LKL + +D F V LP L+T+ L + F +
Sbjct: 111 --VNNYCPIKLPGSISMCETLVHLKLVEVGIDSFDSVSLPRLETMHLLSVWFSSEAALER 168
Query: 151 LLSGCPILEYMHLSRM 166
L+S P+L+ +++ ++
Sbjct: 169 LISSSPVLQVLYIEKV 184
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 73 VNRWVNSAVQRGLENL-YIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPS 131
+ RW+N+ V R ++++ + Y + + S I++C++LV LKL GL + FV LPS
Sbjct: 109 IGRWINTIVTRKVQHIDVLDDSYGSWEVQLPSSIYTCESLVSLKLCGLTLASPEFVSLPS 168
Query: 132 LKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
LK + L F + + L++ CP+LE + + R
Sbjct: 169 LKVMDLIITKFADDMGLETLITKCPVLESLTIER 202
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F +F+ R + + + + F L+C + +L+ V W+ + + RG+ L + + P
Sbjct: 71 FMEFVDRVLALQGNGS-VNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSILEYPLP 129
Query: 99 KLIKSCIFSCKTLVVLKLFGLNVDVFSF----VHLPSLKTLQLYCLIFPEPQY-VMELLS 153
S IF KTLV LKL N + V LP LKTL + C+ E + ++LLS
Sbjct: 130 ----SEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFVKLLS 185
Query: 154 GCPILEYMHLSRMRYAD---CSSPSNTNVKSLTKLV 186
GCP+LE + L + + + CS +VK+L +L
Sbjct: 186 GCPVLEELVLMNIGWENWKFCS----VSVKTLKRLT 217
>AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:20457487-20458873
FORWARD LENGTH=381
Length = 381
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 133/329 (40%), Gaps = 57/329 (17%)
Query: 26 DRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGL 85
D SY N Y FS+F+ R++ R I T + G + N D+ W+ +A +
Sbjct: 48 DDSYQ--NLEYGKFSRFVDRSLFMR-KAPGIETLHFKLGQNCGN-GDIQWWIRAASKFCF 103
Query: 86 ENLYIQL--FYQIFPKLIKSCIFS-CKTLVVLKLF-GLNVDVFSFVHLPSLKTLQLYCLI 141
L I++ P ++ +++ C+ LV LKL + VDV S PSLK L L +
Sbjct: 104 RELIIEINCSTSASPSILPRSLYTECRMLVTLKLKKAVLVDVSSPTCFPSLKNLSLVSVK 163
Query: 142 FPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLV------SADISFIGF 195
+P ++V LLS C +LE + + + D + + V SL LV A GF
Sbjct: 164 YPGNEFVKSLLSSCHVLEDLVVEQC-INDNVTIFSVKVPSLKSLVLRTSKERAPDGESGF 222
Query: 196 --EIPLKVICNVEFLRIDK------------------------YPYEIP---VFPNLTHL 226
E P ++E+L ID+ +P P VF L H+
Sbjct: 223 VVEAP-----SLEYLDIDQTGGFCVIENGMPNLAEAYVSVLHHHPDMYPIRCVFHRLVHI 277
Query: 227 ELMMSGIGMNWHLVLAMXXXXXXXXXXXXDMKASSTHDMVWTSPFND-----PECLSSQL 281
L W +LA ++ H + SP D PEC+ S L
Sbjct: 278 TLCTC--DDEWLNLLACLLKGSPKLISLK-LEKHHGHLICSPSPLRDDLSSVPECVLSSL 334
Query: 282 RKCSITNYKGTKSELHFATYIMQSSRVLQ 310
+Y+GT++E +I+++ L+
Sbjct: 335 ETVEWVDYEGTEAERQLVEFILRNGSCLK 363
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 52 HHQPI-TTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIK--SCIFSC 108
H P+ +FRL+ S + D+ WV A R L L + K S + +C
Sbjct: 84 HKAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLVAADTGTGTAFKFPSSLCTC 143
Query: 109 KTLVVLKLFGLN-VDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMR 167
TL L+L L VD+ S V + SL+TL L + + + + LLSGCPILE + + R
Sbjct: 144 NTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIRNLLSGCPILEELLVIRGE 203
Query: 168 YADCSSPSNTNVKSLTKLVSAD 189
+D + V SL +L D
Sbjct: 204 DSDIEVFTIDEVPSLKRLTIND 225
>AT5G56410.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:22848508-22850331 REVERSE LENGTH=503
Length = 503
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQL--FYQIFPKLIKSCIFSC 108
H P I + RL + F +N WV AV R ++ L ++ F L+ + +++C
Sbjct: 88 HSSPVIESLRLTIYNELFQPESINLWVEIAVSRCVKELSVRFSPFKGKRDALLPTTLYTC 147
Query: 109 KTLVVLKLF-GLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMR 167
K+LV LKL + VDV LPSLKTL L + + + + + LLS C +LE + + R R
Sbjct: 148 KSLVTLKLRENILVDVPHVFCLPSLKTLHLSHVTYADEESLQRLLSNCFVLEDLVVER-R 206
Query: 168 YADCSSPSNTNVKSLTKLVSADISFIGFEI 197
D NV++ ++ + +S + FEI
Sbjct: 207 VGD-------NVRNFAVIIPSLLS-LSFEI 228
>AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:25272033-25273537 FORWARD LENGTH=449
Length = 449
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 27 RSYLIINRSYNGFSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGL 85
+Y I++ S + FI + + H P I + RL+ + F D+ WV AV R
Sbjct: 72 ETYSIVSESGHRMRSFIEKNLPL--HSSPVIESLRLKFFTEVFQPEDIKLWVEIAVSRCA 129
Query: 86 ENLYIQLFYQIFPK-----LIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYC 139
+ L + F PK L+ +++CK+LV LKL + VDV LPSLK L L
Sbjct: 130 QELSVDFF----PKEKHNALLPRNLYTCKSLVTLKLRNNILVDVPHVFSLPSLKILHLER 185
Query: 140 LIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADISFIGFEIPL 199
+ + + + + LLS C +LE + + + NV+ L ++ S + +
Sbjct: 186 VTYGDGESLQRLLSNCSVLEDLVVEL--------DTGDNVRKLDVIIP---SLLSLSFGM 234
Query: 200 KVICNVEFLRID 211
C E RID
Sbjct: 235 SRYCAYEGYRID 246
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 35 SYNGFSKFIYRTMRNRDHHQPITTFRL--------QCGSSHFNLSDVNRWVNSAVQRGLE 86
+N F+YR + + + F+L Q + HF W N+ V+R ++
Sbjct: 78 EFNALLGFVYRFL-GFNSESCLQKFKLTVNWYDDVQLETVHFT-----EWFNAVVKRKVQ 131
Query: 87 NLYI-QLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEP 145
+L+I + +I +F+C +L+ L L+ + + FV LPSLK + L ++F E
Sbjct: 132 HLHILDKTWGRDEVVIPPTVFTCGSLISLNLYDVYLPNREFVSLPSLKVIVLDAVVFDED 191
Query: 146 QYVMELLSGCPILEYMHLSRMRYAD 170
L+SGCP+LE + ++++ D
Sbjct: 192 FAFEMLVSGCPVLESLSVNKINLND 216
>AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24716497-24718050
REVERSE LENGTH=456
Length = 456
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 35 SYNGFSKFIYRTMRNRDHHQPITTFRL--QC---GSSHFNLSDVNRWVNSAVQRGLENLY 89
YN F F+ R + + + + F+L C G + + RW+N V+R +++L
Sbjct: 80 EYNTFVSFVDRFL-STNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLD 138
Query: 90 IQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVM 149
++ P ++ + CK+LV LKL G+ + + FV LPS+K + L + F +
Sbjct: 139 LEWGALEIPPIV----YVCKSLVSLKLCGVILPIPEFVCLPSVKVIVLDWVKFANDLALE 194
Query: 150 ELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADISF 192
L+SGC +L+ + L R +N NVK L + +SF
Sbjct: 195 MLISGCLVLKSLTLCR--------SNNDNVKVLRVRSQSLLSF 229
>AT3G10750.1 | Symbols: | FBD domain family | chr3:3366927-3368269
FORWARD LENGTH=299
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 35/300 (11%)
Query: 22 STLPDRSYLIINRSYNGFSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLSDVNRWVNSA 80
+ LP Y N + ++++ H P + + R+ G DV +WV++A
Sbjct: 12 TMLPKLEYTESNEGGKSIWDLLEKSLQL--HKAPSVESLRIMLGPQCPVDVDVGKWVSNA 69
Query: 81 VQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYC 139
V R + L + L + P + +++ KTLV L L G + VDV S LPSL++L L
Sbjct: 70 VDRYVRELTLSLSFLSDPASKR--LYTSKTLVKLNLMGKILVDVPSAACLPSLQSLLLVN 127
Query: 140 LIFPEPQYVMELLSGCPILEYMHLSR------MRYADCSS-PSNTNVKSLTKLVSADISF 192
+++ + + LL CP+L Y+ + R R+ D S N + +SL + S +++
Sbjct: 128 VVYKDQDSHVRLLLSCPVLRYLLVIRNKSDNVTRFIDSQSLEKNGSGRSLV-IDSPGLNY 186
Query: 193 IGFEIPLKVICNVEFLRIDKYP--YEIPVFPNLTHLELMMSGIGMNWHLVLAMXXXXXXX 250
+ ID + I P L + + G N + +
Sbjct: 187 LSI--------------IDSLGGNFSIQNMPCLEKAIVSLCGFYPNDKFLTSFSSVKILP 232
Query: 251 XXXXXDMKASSTHDMVWTSPFNDPECLSSQLRKCSITNYKGTKSELHFATYIMQSSRVLQ 310
D S W P + P C+ S L ++G + E YI+++S V +
Sbjct: 233 SQPFIDHVPLS-----WNQPSSVPRCVLSHLEILEWKLFEGRREEKQLLAYILENSEVFE 287
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 25 PDRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRG 84
P+ + F F+ R + PI F L+C + +L +N+W+ + +QRG
Sbjct: 55 PEEGKQTREGTRQSFIDFVDRVLALHGD-SPIRKFSLKCKTG-VDLDLLNQWICNVLQRG 112
Query: 85 LENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVH---LPSLKTLQLYCLI 141
+ L I L + + + IF +TLV LKL F H LP LKTL L +
Sbjct: 113 V--LLIDLSMDLGHRCMFIEIFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVS 170
Query: 142 FPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNT-NVKSLTKLVSADISFIG------ 194
+ + + LLS CP LE ++L+ + S P+ T ++ SL L +S G
Sbjct: 171 WSDSGQLERLLSACPALEALNLANVHG---SYPNATVSIASLKTLTIKSVSLSGPAHVFS 227
Query: 195 FEIPLKVICNVEFLRIDKYP 214
F+ P + N L D YP
Sbjct: 228 FDTPNLLCLNYTALFEDDYP 247
>AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
F-box domain, Skp2-like (InterPro:IPR022364),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT5G53635.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:21788311-21790690
REVERSE LENGTH=517
Length = 517
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 33 NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSD---VNRWVNSAVQRGLENLY 89
+R ++ F+ F+ R D ++ + +L+ S N D + W+++A +R +++L
Sbjct: 68 SRDFSDFNTFVSFCDRYFDSNRVLCINKLKLTISE-NEEDGFYLKSWIDAAAKRKIQHLD 126
Query: 90 IQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVM 149
+Q Q F K I ++ C+ LV L+LF +++D P +KT+ L ++P
Sbjct: 127 VQFLPQ-FHK-IHFNLYKCEALVSLRLFEVSLDKGRIFSFPCMKTMHLEDNVYPNEATFK 184
Query: 150 ELLSGCPILE 159
EL+S CP+LE
Sbjct: 185 ELISCCPVLE 194
>AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:9014082-9015917
FORWARD LENGTH=481
Length = 481
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 76 WVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTL 135
W+N+ V R + LY++ + + ++ C+TLV LKLF L + FV LP LK +
Sbjct: 109 WINAFVTRNIRRLYVRRVRGNYFHELPLSLYVCETLVSLKLFHLTLVDPEFVSLPCLKIM 168
Query: 136 QLYCLIFPEPQYVMELLSGCPILE 159
L + FP L+S CP+LE
Sbjct: 169 HLNYVWFPNDATFERLVSSCPVLE 192
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 37 NGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQ- 95
+ F F+ R + + + P+ F L+ G + W+N+ ++RG+ +L + ++ +
Sbjct: 68 SSFMDFVDRVLALQ-GNSPLHKFSLKIGDG-VEPDRIIPWINNVLERGVSDLDLHVYMET 125
Query: 96 --IFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQY-VMELL 152
+FP S +F KTLV LKL + F V+LP LKTL + F + + +LL
Sbjct: 126 EFVFP----SEMFLSKTLVRLKLMLYPLLEFEDVYLPKLKTLYIDSCYFEKYGIGLTKLL 181
Query: 153 SGCPILEYMHLSRMRYA--DCSSPSNTNVKSLT 183
SGCPILE + L + + D +S S +K LT
Sbjct: 182 SGCPILEDLVLDDIPWCTWDFASVSVPTLKRLT 214
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 26/239 (10%)
Query: 10 YQRRRNL-MADRISTLPDRSYLIINRSYNGF--SKFIYRTMRNRDHHQPITTFRLQCGSS 66
+ R NL D IS P+ I +S+N F S ++ ++ I F L
Sbjct: 35 FTRSDNLDFHDPISGRPED----ILKSFNDFVDSSLAFQGGKH------IKKFSLHTKIK 84
Query: 67 HFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKL--IKSCIFSCKTLVVLKLFGLNVDVF 124
F ++RW+ +A++ G+ L++ L ++ +P L I S +F+ TLV L L G +
Sbjct: 85 TFEYHVLDRWICNALEHGVSELHLHLMHESWPWLFSIPSKVFNSSTLVKLSL-GSRLYCP 143
Query: 125 SF---VHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNVKS 181
SF LP+LK L L ++F + Q L+ CP LE + + Y C S+ ++K
Sbjct: 144 SFPPDTSLPALKVLLLDSILFRDDQLSNVFLAACPALEDLTIHHT-YHPCVI-SSKSIKK 201
Query: 182 LTKLVSADISFIGFEIPLKVICNVEFLRIDKYPYEIPVFPNLTHLELMMSGIGMNWHLV 240
L+ V++ G+ + L V+ D + P+F HL+ ++ + ++ H +
Sbjct: 202 LSLSVNSGYYGAGYILTLDTPSVVDLYYSDSPRHNAPLF----HLD-SLAKVTLDLHFI 255
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 125/319 (39%), Gaps = 63/319 (19%)
Query: 52 HHQPI-TTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIK----SCIF 106
H P+ +FRL+ +FN D+ WV A R L L + + K + S +
Sbjct: 88 HKAPVLESFRLKF--VNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLC 145
Query: 107 SCKTLVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
+C TL LKL + VD+ S V + SL+TL L + + + V LLSGCP LE + L R
Sbjct: 146 TCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYR 205
Query: 166 MRYAD-----CSSPSNT--------------------------------------NVKSL 182
+D PS N L
Sbjct: 206 GDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPEL 265
Query: 183 TKLVSADISFIGFEIPLKVICNVEFLRIDKYPYEI-----PVFPNLTHLELMMSGIGMNW 237
+ A+++ I E L +V L ++ P +I +F L LE M + W
Sbjct: 266 VEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLE-MYTREAEWW 324
Query: 238 HLVLAMXXXXXXXXXXXXDMKASSTH-DMVWTSPFND----PECLSSQLRKCSITNYK-G 291
+L+ M ++ + H D + + +N+ PECL SQL + G
Sbjct: 325 NLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWG 384
Query: 292 TKSELHFATYIMQSSRVLQ 310
+ E ATYI+++ R L+
Sbjct: 385 REEEKEIATYILKNGRRLK 403
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 125/319 (39%), Gaps = 63/319 (19%)
Query: 52 HHQPI-TTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIK----SCIF 106
H P+ +FRL+ +FN D+ WV A R L L + + K + S +
Sbjct: 88 HKAPVLESFRLKF--VNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLC 145
Query: 107 SCKTLVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
+C TL LKL + VD+ S V + SL+TL L + + + V LLSGCP LE + L R
Sbjct: 146 TCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYR 205
Query: 166 MRYAD-----CSSPSNT--------------------------------------NVKSL 182
+D PS N L
Sbjct: 206 GDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPEL 265
Query: 183 TKLVSADISFIGFEIPLKVICNVEFLRIDKYPYEI-----PVFPNLTHLELMMSGIGMNW 237
+ A+++ I E L +V L ++ P +I +F L LE M + W
Sbjct: 266 VEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLE-MYTREAEWW 324
Query: 238 HLVLAMXXXXXXXXXXXXDMKASSTH-DMVWTSPFND----PECLSSQLRKCSITNYK-G 291
+L+ M ++ + H D + + +N+ PECL SQL + G
Sbjct: 325 NLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWG 384
Query: 292 TKSELHFATYIMQSSRVLQ 310
+ E ATYI+++ R L+
Sbjct: 385 REEEKEIATYILKNGRRLK 403
>AT3G59180.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr3:21880719-21882459 FORWARD LENGTH=475
Length = 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQ 95
+ F F+ R M + + P+ F L+C + + V+ W+ + + RG+ +L + + +
Sbjct: 35 HKSFKLFVNRLMALQ-GNAPLNRFSLKC-KVRCDSACVDGWIINVLDRGVLDLDLNISSE 92
Query: 96 IFPKLIKSCIFSCKTLVVLKLFGLN---VDVFSFVHLPSLKTLQLYCLIFPEPQYVM--E 150
KL S +F KTLV LKL G + +DV V LP LKTL L+ + E V +
Sbjct: 93 SDYKL-PSEVFLNKTLVRLKLGGKDEFIIDVEE-VFLPKLKTLYLHGFVCFEDSGVACAK 150
Query: 151 LLSGCPILEYMHLSRMRYA--DCSSPSNTNVKSLT---KLVSADISFIGFEIPLKVICNV 205
L+SGCP+LE + + + + D S SN +K +T +++ + + F+ P V
Sbjct: 151 LISGCPVLEELVMINLMWGLMDVCSVSNPTLKRVTICSEIIDYNPQSVSFDTPNLVYLEF 210
Query: 206 EFLRIDKYP 214
+ KYP
Sbjct: 211 TDVVAIKYP 219
>AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Query: 34 RSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLF 93
R+ + FS F+ T+ + PI L +SH+ S VNRW+ SA++RG L +Q
Sbjct: 57 RNADSFSDFMKDTVALL-SNCPIKRLTL---NSHYEKSSVNRWIRSALKRGCLELNLQSQ 112
Query: 94 YQIFPKLIKSCIFSCKTLVVLKLFGL------NVDVFSFVHLPSLKTLQLYCLIFPEPQY 147
Y + L F TLV L L NV V P+LKTL L ++ +P
Sbjct: 113 YDHY--LDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAVV-AKPAL 169
Query: 148 VMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADIS--FIGFEIPLKVICNV 205
L+SGCP+LE + + + D P+ T +VSA I I F P
Sbjct: 170 YNWLISGCPVLEELFILDVGSGD-DQPTWTR-----SVVSASIKRLTIVFHFPH------ 217
Query: 206 EFLRIDKYPYEIPV---FPNLTHLE 227
+ YPYE V PNL L+
Sbjct: 218 -----NTYPYEDDVEIKTPNLEFLD 237
>AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Query: 34 RSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLF 93
R+ + FS F+ T+ + PI L +SH+ S VNRW+ SA++RG L +Q
Sbjct: 57 RNADSFSDFMKDTVALL-SNCPIKRLTL---NSHYEKSSVNRWIRSALKRGCLELNLQSQ 112
Query: 94 YQIFPKLIKSCIFSCKTLVVLKLFGL------NVDVFSFVHLPSLKTLQLYCLIFPEPQY 147
Y + L F TLV L L NV V P+LKTL L ++ +P
Sbjct: 113 YDHY--LDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAVV-AKPAL 169
Query: 148 VMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLVSADIS--FIGFEIPLKVICNV 205
L+SGCP+LE + + + D P+ T +VSA I I F P
Sbjct: 170 YNWLISGCPVLEELFILDVGSGD-DQPTWTR-----SVVSASIKRLTIVFHFPH------ 217
Query: 206 EFLRIDKYPYEIPV---FPNLTHLE 227
+ YPYE V PNL L+
Sbjct: 218 -----NTYPYEDDVEIKTPNLEFLD 237
>AT5G52460.1 | Symbols: EDA41 | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:21292375-21293758
REVERSE LENGTH=369
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 72 DVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLP 130
DV + V +AV R + L ++L + P + +++CKTLV L L + VDV S V LP
Sbjct: 72 DVGKLVANAVDRFVRKLELELHWTAEPTSLPKSLYTCKTLVELTLSDKIIVDVPSSVCLP 131
Query: 131 SLKTLQLYCLIFPEPQYVMELLSGCPIL 158
SL L+L+ ++F + + L+S C +L
Sbjct: 132 SLNILRLFYVVFKDENSLERLISSCSVL 159
>AT1G64540.1 | Symbols: | F-box/FBD-like domains containing protein
| chr1:23966909-23968425 FORWARD LENGTH=444
Length = 444
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 33 NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQL 92
+ S +GFS F+ +T+ R + PI RL H+ S + W+++A +RG L++Q
Sbjct: 51 DSSTSGFSAFLEQTVA-RLNTCPIK--RLSLNGRHYRFSSADSWISTAFERGCLELHLQS 107
Query: 93 FYQIFPKLIKSCIFSCKTLVVLKLF------GLNVDVFSFVHLPSLKTLQLYCLIFPEPQ 146
Y + + I S TLV L L GL V V P+LKTL L ++
Sbjct: 108 QY------LDTGILSSNTLVKLTLSDQIYLQGL-VPHDGTVFFPALKTLSLGAVVADRDV 160
Query: 147 YVMELLSGCPILEYMHLSRMRYADCSSPS-------NTNVKSLT 183
Y L+SGCP+L+ + + C P N +VK LT
Sbjct: 161 Y-ESLISGCPVLDELSIR----DGCDDPPTWKKSVVNKSVKRLT 199
>AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24727041-24728614 REVERSE LENGTH=457
Length = 457
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 23/152 (15%)
Query: 28 SYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLEN 87
S+L INR + +KF R N D + + ++H + RW+++ V++ ++
Sbjct: 91 SFLSINRE-SSLNKFKLRIYCNHDRDK-------ETNNAH-----MARWISAIVEQNVQ- 136
Query: 88 LYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQY 147
++ L + P + ++ C++LV L+L G+ + F++LP +K L L +IF
Sbjct: 137 -HVDLTW--LPVEVPPILYLCESLVTLRLCGVVLANLEFMYLPLVKVLALEWVIFANELA 193
Query: 148 VMELLSGCPILEYMHLSRMRYADCSSPSNTNV 179
+ +L+SGC +LE +R+ CS N NV
Sbjct: 194 LEKLISGCLVLE-----SLRFCKCSL-DNVNV 219
>AT4G10410.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:6448983-6449998 REVERSE LENGTH=263
Length = 263
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 52 HHQP-ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKT 110
H P I +FRL+ +FN D+ WV V R + L +++ ++ S +++CK+
Sbjct: 55 HRAPVIESFRLELSGLYFNPEDIRMWVVVVVSRYVREL--EIYCPEKQHILPSSLYTCKS 112
Query: 111 LVVLKL-FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRY 168
LV+LKL G+ +DV V LPSL+TL+L ++V++ P LEY L Y
Sbjct: 113 LVILKLDGGIILDVPPMVCLPSLRTLELKGYTCDVDEFVID----TPSLEYFKLEDRNY 167
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 37 NGFSKFIYRTM----RNRDHHQPITTFRLQCGSSHFNLSD-VNRWVNSAVQRGLENLYIQ 91
GF +F+ R M R+R IT F H D + + + V RG+++LY+
Sbjct: 63 EGFVRFMDRFMEFKCRSRLQKFMITYFE------HNGYRDRLMELIGTLVDRGIQHLYVY 116
Query: 92 LFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFV-HLPSLKTLQLYCLIFPE--PQYV 148
+ I+ I+ KTLV LKL+ + + FV LP LK L+L + E P V
Sbjct: 117 MHTCNRVDFIRQNIYKSKTLVSLKLYNVELKNPEFVVSLPCLKILKLENIFHGEDGPLVV 176
Query: 149 MELLSGCPILEYMHLSR-----MRYADCSSPSNTNVKSLTKLVSADISFIGFEIPLKVIC 203
+L+SGCP+LE + L R + Y ++P + + + D + + +IC
Sbjct: 177 EKLISGCPVLEDLELIRPFDDNVGYGSLTAPKYSRNRDII----GDFLTVISSVRHTIIC 232
Query: 204 NVEFLRIDKYPYE---IPVFPNLTHLELMMSG 232
+ Y + IP F NL HL+ S
Sbjct: 233 YSTSKMLYSYSKQLGPIPQFHNLYHLQARFSS 264
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE LENGTH=448
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 10 YQRRRNL-MADRISTLPDRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHF 68
+ RRNL D I + P+ ++ F F+ + + + PI F L G H
Sbjct: 43 FAVRRNLDFDDSIISHPEVGEQNMDDVQESFRDFVDKRLAFQGS-VPINKFSLIYGDKHD 101
Query: 69 NLSDVNRWVNSAVQRGLENLYIQLF-----YQIFPKLIKSCIFSCKTLVVLKLFGLNVDV 123
++ V+RW+N+A++ G+ L++ L FP S +F TLV L L G N+ +
Sbjct: 102 DVR-VDRWINTALEHGVSELHLCLTSVTRRLHRFP----SNVFRSTTLVKLTL-GTNLFI 155
Query: 124 FSF---VHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSS-PSNTNV 179
F LP LK L L + F ++ LL+GCP LE + + + + + S+ V
Sbjct: 156 VYFPSDTCLPVLKILVLDSIWFDRIKFSNVLLAGCPALEDLTIDQKSFPGLPNVVSSKTV 215
Query: 180 KSLT 183
KSL+
Sbjct: 216 KSLS 219
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 37 NGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQI 96
+ F F+ R + + PI ++C S + V RW+ ++ G+ L I + +
Sbjct: 55 DSFIDFVDRVLVVTGNF-PIRRISIKCRMS-IDTGHVTRWMVDVLEHGVSYLDIDIISED 112
Query: 97 FPKLIKSCIFSCKTLVVLKLF-GLNVDVFSFVHLPSLKTLQLYCLIFPEPQY--VMELLS 153
+ IF+CKTLV LKL G V +V LPSLKTL L + F + LLS
Sbjct: 113 DIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLS 172
Query: 154 GCPILEYMHLSRMRYAD---CSSPSNTNVKSLTKLVSADISFIGFEIPLKVICNVEFLRI 210
CP+LE + + + C + S++ +K LT S + G I + +E+
Sbjct: 173 ACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEY--S 230
Query: 211 DKYPYEIPVFPNLTHL 226
D P P F NL L
Sbjct: 231 DLVPRHFP-FVNLESL 245
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQ--CGSSHFNLSDVNRWVNSAVQRGLENLYIQLF 93
YN F F+ R + D +FRL+ C +S+V RW+N V + L+ L + +
Sbjct: 68 YNAFVSFVDRFLA-LDRESCFQSFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDVLDY 126
Query: 94 YQIFPKL-IKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELL 152
++ I +++C++LV LKL + + + LP +K ++L + F + +++
Sbjct: 127 TWGNEEVQIPPSVYTCESLVSLKLCNVILPNPKVISLPLVKVIELDIVKFSNALVLEKII 186
Query: 153 SGCPILEYMHLSRMRYAD 170
S C LE + +SR D
Sbjct: 187 SSCSALESLIISRSSVDD 204
>AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21785999-21787444
REVERSE LENGTH=426
Length = 426
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 71 SDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLP 130
S + W+++AV+ +++L++Q + + ++ C+TLV LKL + +D FV LP
Sbjct: 89 SYLTSWIDAAVKCKIQHLHVQCLPAKYIYEMPLSLYICETLVYLKLCRVMLDDAEFVSLP 148
Query: 131 SLKTLQLYCLIFPEPQYVMELLSGCPILEYMHL 163
LKT+ L + FP + +S CP+LE + +
Sbjct: 149 CLKTIHLEYVWFPNEANLERFVSCCPVLEELKI 181
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 39 FSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLS-DVNRWVNSAVQRGLENLYIQLFYQI 96
FS+F+ R++ H P + + ++ GS F DV WV V R + L +
Sbjct: 62 FSQFVDRSLLL--HKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGE 119
Query: 97 FPKLIKSCIFSCKTLVVLKLFGLNV-DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGC 155
P + C+F+C TL VLKL + + D +V SLKTL L + + + Q + ++S C
Sbjct: 120 EPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSC 179
Query: 156 PILEYMHLSR 165
LE + + R
Sbjct: 180 SSLEDLVVQR 189
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 39 FSKFIYRTMRNRDHHQP-ITTFRLQCGSSHFNLS-DVNRWVNSAVQRGLENLYIQLFYQI 96
FS+F+ R++ H P + + ++ GS F DV WV V R + L +
Sbjct: 62 FSQFVDRSLLL--HKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGE 119
Query: 97 FPKLIKSCIFSCKTLVVLKLFGLNV-DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGC 155
P + C+F+C TL VLKL + + D +V SLKTL L + + + Q + ++S C
Sbjct: 120 EPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSC 179
Query: 156 PILEYMHLSR 165
LE + + R
Sbjct: 180 SSLEDLVVQR 189
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 37 NGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQI 96
+ F F+ R + + PI ++C S + V RW+ ++ G+ L I + +
Sbjct: 55 DSFIDFVDRVLVVTGNF-PIRRISIKCRMS-IDTGHVTRWMVDVLEHGVSYLDIDIISED 112
Query: 97 FPKLIKSCIFSCKTLVVLKLF-GLNVDVFSFVHLPSLKTLQLYCLIFPEPQY--VMELLS 153
+ IF+CKTLV LKL G V +V LPSLKTL L + F + LLS
Sbjct: 113 DIGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLS 172
Query: 154 GCPILEYMHLSRMRYAD---CSSPSNTNVKSLTKLVSADISFIGFEIPLKVICNVEFLRI 210
CP+LE + + + C + S++ +K LT S + G I + +E+
Sbjct: 173 ACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEY--S 230
Query: 211 DKYPYEIPVFPNLTHL 226
D P P F NL L
Sbjct: 231 DLVPRHFP-FVNLESL 245
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 33 NRSYNGFSKFIYRTMR-NRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQ 91
++SY F F+ + P+ F ++C + S V W+ ++RG+ ++ +
Sbjct: 74 SKSYESFMSFVDSVLALQAKTKTPLKRFHVKC-EDVVDQSWVLEWIPKVLKRGVLDIDLH 132
Query: 92 L-----------FYQIFPKLIKSCIFSCKTLVVLKL---FGLNVDVFSFVHLPSLKTLQL 137
+ FY + K IF KTLV LK+ G+++DV V LP LKTL L
Sbjct: 133 ITSSRNYCENSSFYSLPSK-----IFVSKTLVRLKIQFQDGVHIDVEGGVSLPKLKTLHL 187
Query: 138 -YCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNV 179
Y I E + +LLSGC LE + L+ + +AD S +V
Sbjct: 188 DYFKI--ETSMLNKLLSGCHALEELVLANLMWADSSEDEACHV 228
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F F+ R + + PI F L + + V+RW+ + +QRG+ +L + + ++
Sbjct: 73 FMDFVDRVLALQ-GASPIKKFSLNVKTG-VDPDRVDRWICNVLQRGVSHLALFMDFEEEY 130
Query: 99 KLIKSCIFSCKTLVVLKLFGLNVDVFSF---VHLPSLKTLQLYCLIFPEPQYVMELLSGC 155
L S KTLV LK G VD++ + + LP LKTL L + F Q+ LL C
Sbjct: 131 SLPYEISVS-KTLVELKT-GYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQF-QTLLPAC 187
Query: 156 PILEYMHLSRMRYADCSSP-SNTNVKSLTKLVSAD--ISFIGFEIPLKVICNVEFLRIDK 212
P+LE + L M + D + S++++K+L K+ S D + + F+ P N+ FL D
Sbjct: 188 PVLEELMLLNMEWKDRNVILSSSSLKNL-KITSEDGCLGTLSFDTP-----NLVFL--DY 239
Query: 213 YPYEIPVFPNLTHLELMMSGIGM 235
Y Y +P + L+ GI +
Sbjct: 240 YDYVAEDYPIVNLKNLVEVGINL 262
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 37 NGFSKFIYRTMRNRDHHQPIT---TFRLQCGS-SHFNLSDVNRWVNSAVQRG-LENLYIQ 91
G ++FI T+ H P + +L+ G+ D+ WV+ AV + L ++
Sbjct: 57 QGLARFI--TLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLK 114
Query: 92 L--FYQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYV 148
L F + KL KS ++ CK++V+LKL + VDV V LPSLKTL L + + + +
Sbjct: 115 LCTFAERPTKLPKS-LYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSL 173
Query: 149 MELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKLV 186
LLS CP+LE + + R R + S VKSL +L
Sbjct: 174 HRLLSNCPVLEDLVVERDRIDNLGKLS-VVVKSLQRLT 210
>AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20802340
FORWARD LENGTH=492
Length = 492
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 37 NGFSKFIYRTMRNRDHHQPIT---TFRLQCGS-SHFNLSDVNRWVNSAVQ-RGLENLYIQ 91
G ++FI ++R H P + + + G+ D+ WV+ AV + L ++
Sbjct: 108 QGLARFITSSLRV--HKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLK 165
Query: 92 LF-YQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVM 149
LF + P + + CK++V+LKL + VDV V LPSLKTL L + + + +
Sbjct: 166 LFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLH 225
Query: 150 ELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKL 185
LLS CP+LE + + R + + S VKSL +L
Sbjct: 226 RLLSNCPVLEDLVMERDKIDNLGKLS-VIVKSLQRL 260
>AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20801788
FORWARD LENGTH=364
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 37 NGFSKFIYRTMRNRDHHQPIT---TFRLQCGS-SHFNLSDVNRWVNSAVQ-RGLENLYIQ 91
G ++FI ++R H P + + + G+ D+ WV+ AV + L ++
Sbjct: 108 QGLARFITSSLRV--HKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLK 165
Query: 92 LF-YQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVM 149
LF + P + + CK++V+LKL + VDV V LPSLKTL L + + + +
Sbjct: 166 LFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLH 225
Query: 150 ELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLTKL 185
LLS CP+LE + + R + + S VKSL +L
Sbjct: 226 RLLSNCPVLEDLVMERDKIDNLGKLS-VIVKSLQRL 260
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 52 HHQPI-TTFRLQCG-SSHFNLSDVNRWVNSAVQRGLENLYIQLF--YQIF-PKLIKSCIF 106
H PI + RL+ ++ +W+ AV R + L I LF Y I P + S ++
Sbjct: 240 HRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINLFPLYCIENPAKLPSSLY 299
Query: 107 SCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSR 165
K+LV+LKL + VDV +LPSLK L L + + + + +LLS CP+L+ + + R
Sbjct: 300 ISKSLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTYKDSNSLHQLLSSCPVLKNLVVER 359
Query: 166 MRY--ADCSSPSNTNVKSLTKLVSADISFIGFEIPLKVI-----------CNVEFLRIDK 212
Y + S + ++++ LT +S SF I + C E L D
Sbjct: 360 DEYNHDETLSITVSSLQRLTLKISRGGSFDELVINTPSLKYFKLTDYLGECETE-LDDDS 418
Query: 213 YPYEIPVFPNL--THLELMMSGIG---------MNWHLVLAMXXXXXXXXXXXXDMKASS 261
Y Y P L H++ IG L + + ++K +
Sbjct: 419 YSYVFKDMPKLEEAHIDSTYPDIGKFVRSITSVKRLSLCVKVNAEEDSPNLRELEIKLNK 478
Query: 262 THDMVWTSPFNDPECLSSQL 281
H + F+DP CL +QL
Sbjct: 479 DH----KASFDDPACLENQL 494
>AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19046748
FORWARD LENGTH=346
Length = 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 56 ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLK 115
I RL G H + D+ W+++A R +++L + F+ I I++C TLV L+
Sbjct: 90 IRKLRLDLGYHH-DKYDLMSWIDAATTRRIQHLDVHCFHD---NKIPLSIYTCTTLVHLR 145
Query: 116 LFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHL 163
L + FV LP LK + + +P + +L+SG P+LE + L
Sbjct: 146 LRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 52 HHQPI-TTFRLQCG-SSHFNLSDVNRWVNSAVQRGLENLYIQLFYQ----IFPKLIKSCI 105
H P+ TF L+ N D+ + A+ R + L +++++ FP+ +
Sbjct: 72 HKAPVLQTFSLKVRLDRRNNAVDIGCLIGIAMTRNVRKLVLEVYFHRGTFTFPR----SL 127
Query: 106 FSCKTLVVLKLFGLNV--DVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHL 163
+ C+TL L+L LNV DV V+L SLKTL L + F + + V+ LLSGCP L+ + +
Sbjct: 128 YHCETLETLELI-LNVVMDVPPSVYLKSLKTLYLLAVDFKDDESVINLLSGCPNLQDLVM 186
Query: 164 SRMRYADCSSPSNTNVKSLT 183
R S++NVK+ T
Sbjct: 187 RR--------NSSSNVKTFT 198
>AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 28 SYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLEN 87
SY R + FS F+ +T+ + F L+C + + +NRW+ +A++RG
Sbjct: 67 SYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHED-DGARINRWIRTALERGCLE 125
Query: 88 LYIQLFYQIFPKLIKSCIFSCKTLVVLKLF-----GLNVDVFSFVHLPSLKTLQLYCLIF 142
L ++ P I S F+ TLV L + G ++ F V P+LKTL L + F
Sbjct: 126 LNLEA-ANYLP--IDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVCF 182
Query: 143 PEPQYVMELLSGCPILEYMHLSR-MRYADCSSPSNTNVKSLT 183
+ + + GCP LE + L M+Y SSP NVK +T
Sbjct: 183 TSVEMINFFIHGCPALEELFLCVWMQYM--SSP---NVKRVT 219
>AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 28 SYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLEN 87
SY R + FS F+ +T+ + F L+C + + +NRW+ +A++RG
Sbjct: 67 SYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHED-DGARINRWIRTALERGCLE 125
Query: 88 LYIQLFYQIFPKLIKSCIFSCKTLVVLKLF-----GLNVDVFSFVHLPSLKTLQLYCLIF 142
L ++ P I S F+ TLV L + G ++ F V P+LKTL L + F
Sbjct: 126 LNLEA-ANYLP--IDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVCF 182
Query: 143 PEPQYVMELLSGCPILEYMHLSR-MRYADCSSPSNTNVKSLT 183
+ + + GCP LE + L M+Y SSP NVK +T
Sbjct: 183 TSVEMINFFIHGCPALEELFLCVWMQYM--SSP---NVKRVT 219
>AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 28 SYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLEN 87
SY R + FS F+ +T+ + F L+C + + +NRW+ +A++RG
Sbjct: 67 SYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHED-DGARINRWIRTALERGCLE 125
Query: 88 LYIQLFYQIFPKLIKSCIFSCKTLVVLKLF-----GLNVDVFSFVHLPSLKTLQLYCLIF 142
L ++ P I S F+ TLV L + G ++ F V P+LKTL L + F
Sbjct: 126 LNLEA-ANYLP--IDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVCF 182
Query: 143 PEPQYVMELLSGCPILEYMHLSR-MRYADCSSPSNTNVKSLT 183
+ + + GCP LE + L M+Y SSP NVK +T
Sbjct: 183 TSVEMINFFIHGCPALEELFLCVWMQYM--SSP---NVKRVT 219
>AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 28 SYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLEN 87
SY R + FS F+ +T+ + F L+C + + +NRW+ +A++RG
Sbjct: 67 SYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHED-DGARINRWIRTALERGCLE 125
Query: 88 LYIQLFYQIFPKLIKSCIFSCKTLVVLKLF-----GLNVDVFSFVHLPSLKTLQLYCLIF 142
L ++ P I S F+ TLV L + G ++ F V P+LKTL L + F
Sbjct: 126 LNLEA-ANYLP--IDSQYFTSNTLVKLTISDGFYPGGHLLPFGGVFFPALKTLTLVSVCF 182
Query: 143 PEPQYVMELLSGCPILEYMHLSR-MRYADCSSPSNTNVKSLT 183
+ + + GCP LE + L M+Y SSP NVK +T
Sbjct: 183 TSVEMINFFIHGCPALEELFLCVWMQYM--SSP---NVKRVT 219
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 34 RSYNGFSKFIYRTMR-NRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQ- 91
+ YN F F+ + + + + + +L + +L V RW++ V+R L++L ++
Sbjct: 78 QDYNAFVGFMNKFIDFSGEEKICLDKLKLSSRKTVNDLPCVTRWIDFVVRRKLKHLDVEC 137
Query: 92 LFYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMEL 151
L + F + + ++ C TLV L+L + + F V LP LKT++L ++ + L
Sbjct: 138 LVNRKFLEEMPLSLYVCDTLVNLRLHRVLLGKFEAVSLPCLKTMRLEENVYANDVVLESL 197
Query: 152 LSGCPILEYMHLSRM 166
+S CP+L+ + + RM
Sbjct: 198 ISSCPVLKDLIILRM 212
>AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=413
Length = 413
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 56 ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLK 115
I RL G H + D+ W+++A R +++L + F+ I I++C TLV L+
Sbjct: 90 IRKLRLDLGYHH-DKYDLMSWIDAATTRRIQHLDVHCFHD---NKIPLSIYTCTTLVHLR 145
Query: 116 LFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHL 163
L + FV LP LK + + +P + +L+SG P+LE + L
Sbjct: 146 LRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193
>AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=435
Length = 435
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 51 DHHQP--ITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSC 108
D H+ I RL G H + D+ W+++A R +++L + F+ I I++C
Sbjct: 83 DSHRDSWIRKLRLDLGY-HHDKYDLMSWIDAATTRRIQHLDVHCFHD---NKIPLSIYTC 138
Query: 109 KTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHL 163
TLV L+L + FV LP LK + + +P + +L+SG P+LE + L
Sbjct: 139 TTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193
>AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr4:6453085-6454209 REVERSE
LENGTH=322
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 76 WVNSAVQRGLENLYI-QLFYQIFPKLIKSCIFSCKTLVVLKL-FGLNVDVFSFVHLPSLK 133
WV + R + L I YQ ++ S +++CK+LV+LKL G+ +DV V LPSLK
Sbjct: 2 WVVVVLSRYVRELEIYSSCYQDKQNILPSSLYTCKSLVILKLNGGILMDVPRMVCLPSLK 61
Query: 134 TLQLYCLIFPEPQYVMELLSGCPILE 159
TL L + + + + + LLS CP+LE
Sbjct: 62 TLVLKGVNYFKQESLQRLLSNCPVLE 87
>AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:9317589-9319078
FORWARD LENGTH=419
Length = 419
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 72 DVNRWVNSAVQRGLENLYIQLFYQIFPKLIKSCIFSCKTLVVLKLFG-LNVDVFSFVHLP 130
DV +WV + V RG++ L L + P C+++C TLV L L + V+V S V LP
Sbjct: 122 DVGKWVENVVNRGVKELDFNLLWTAEPTGFPKCLYTCNTLVDLSLSNKILVNVSSPVRLP 181
Query: 131 SLKTLQLYCLIFPEPQ 146
SL TL L +++ + +
Sbjct: 182 SLLTLSLRFVVYKDEE 197
>AT1G56610.2 | Symbols: | Protein with RNI-like/FBD-like domains |
chr1:21212378-21213960 FORWARD LENGTH=472
Length = 472
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 33 NRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQL 92
++ F +F+ + +R R + + + +F L + + V V+ + G+E L + +
Sbjct: 61 DQEEEHFVRFVDQVLRQRGNRK-LDSFSLTL-NDEIDGGFVTHLVDYPLDNGVEKLKLSI 118
Query: 93 FYQIFPKLIKSCIFSCKTLVVLKL------FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQ 146
+ + S +FS TLV LKL +N D + HLP LKTL L ++ + +
Sbjct: 119 YDIKGNFQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVLVADVK 178
Query: 147 YVMELLSGCPILEYMHLSRMRY 168
+ LLS CPILE + + M++
Sbjct: 179 VFVRLLSRCPILEELVMIDMKW 200
>AT1G56610.3 | Symbols: | Protein with RNI-like/FBD-like domains |
chr1:21212495-21213960 FORWARD LENGTH=433
Length = 433
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F +F+ + +R R + + + +F L + + V V+ + G+E L + ++
Sbjct: 28 FVRFVDQVLRQRGNRK-LDSFSLTL-NDEIDGGFVTHLVDYPLDNGVEKLKLSIYDIKGN 85
Query: 99 KLIKSCIFSCKTLVVLKL------FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELL 152
+ S +FS TLV LKL +N D + HLP LKTL L ++ + + + LL
Sbjct: 86 FQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVLVADVKVFVRLL 145
Query: 153 SGCPILEYMHLSRMRY 168
S CPILE + + M++
Sbjct: 146 SRCPILEELVMIDMKW 161
>AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:21631947-21633642 FORWARD LENGTH=505
Length = 505
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 38 GFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIF 97
F F+ + +R +D+ P+ F L+ ++ + W+ ++RG+ +L + + + +
Sbjct: 86 SFMDFVDQVLRLQDN-SPLHKFSLKIRDC-VDIVRIICWILKVLERGVSDLELDMHLK-W 142
Query: 98 PKLIKSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVM-ELLS 153
+ S IF +TLV LKL G +DV VHLP LKTL + + F + + +LLS
Sbjct: 143 KSSLPSKIFLSETLVRLKLSVERGPFIDVED-VHLPKLKTLHIVSVKFEKHGIGLNKLLS 201
Query: 154 GCPILEYMHLSRMRYA--DCSSPSNTNVKSLT 183
GC ILE ++L + + D S S T +K LT
Sbjct: 202 GCHILEELNLEYISWCLWDFVSVSLTTLKRLT 233
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 71 SDVNRWVNSAVQRGLENLYIQLFY-QIFPKLIKSCIFSCKTLVVLKLF-GLNVDVFSFVH 128
SD+ W++ A+ R + NL+I + P + +++C+TLV L L VD F+
Sbjct: 89 SDIETWISVAISRRVRNLHIYRYIPSTGPIRLPRSLYTCETLVSLYLLLDFTVDDAPFMF 148
Query: 129 -LPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLT 183
SLK L L F + V LLSGCP+LE + L R N NVK+ T
Sbjct: 149 CFRSLKVLVLLFAKFSSDEIVNRLLSGCPVLEGLILIR---------RNDNVKNFT 195
>AT1G56610.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr1:21212189-21213960 FORWARD LENGTH=535
Length = 535
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 39 FSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFYQIFP 98
F +F+ + +R R + + + +F L + + V V+ + G+E L + ++
Sbjct: 130 FVRFVDQVLRQRGNRK-LDSFSLTL-NDEIDGGFVTHLVDYPLDNGVEKLKLSIYDIKGN 187
Query: 99 KLIKSCIFSCKTLVVLKL------FGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELL 152
+ S +FS TLV LKL +N D + HLP LKTL L ++ + + + LL
Sbjct: 188 FQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVLVADVKVFVRLL 247
Query: 153 SGCPILEYMHLSRMRY 168
S CPILE + + M++
Sbjct: 248 SRCPILEELVMIDMKW 263
>AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr2:17785653-17787211 FORWARD LENGTH=443
Length = 443
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 34 RSYNGFSKFIYRTMRNRDHHQPITTFRLQC----GSSHFNLSDVNRWVNSAVQRG-LENL 88
R + F F+ T+ NR + PI L+ S N + V W++ + RG + +L
Sbjct: 56 REFIDFVDFV-NTLFNRKGNSPIKKLALKIHLKDNQSLQNQTHVQSWIHRVLSRGGVTDL 114
Query: 89 YIQLFYQIFPKLIKSCIFSCKTLVVLKLF-GLNVDV-FSFVHLPSLKTLQLYCLIFPEPQ 146
+ + ++ +L+ IF TLV L+L G + + V+LP LKTL L + F
Sbjct: 115 DLFITFKGKFQLVPLLIFKSNTLVKLRLGRGFTIKLCHENVYLPMLKTLCLDTVDFDGDH 174
Query: 147 YVME-LLSGCPILEYMHLSRMRYAD-CSSPSNTNVKSLTKLVSADISFIGFEIP 198
V E LL CP+LE + L R+ C S S+ ++K L ++ I I ++P
Sbjct: 175 NVFETLLPRCPLLEELVLEDQRWKQWCGSVSSPSLKRL-RIRFFHIPIISLDVP 227
>AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18153852-18155391
FORWARD LENGTH=416
Length = 416
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 37 NGFSKFIYRTMRN--RDHHQPITTFRLQCGSSHFNLSDVNRWVNSAVQRGLENLYIQLFY 94
G KF+ R M + R Q +C ++ + + V G+++LY+ +
Sbjct: 61 EGLIKFMDRFMESNCRSRLQKFMIRYFECNGYRDRFMEL---IGTVVDCGIQHLYVYMHT 117
Query: 95 QIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFV-HLPSLKTLQLYCLIFPE--PQYVMEL 151
I+ I+ KTLV LKL+ + + FV LP LK L+L + + E P V +L
Sbjct: 118 CNRVDFIRQNIYKSKTLVSLKLYNVELKNPDFVVSLPCLKILKLMKICYGEDGPLVVEKL 177
Query: 152 LSGCPILEYMHLSR 165
+SGCP+LE + L +
Sbjct: 178 ISGCPVLEDLELIK 191
>AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24722971-24724475
REVERSE LENGTH=442
Length = 442
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 37 NGFSKFIYRTMR-NRDHHQPITTFRLQCGSSHFNLSD---VNRWVNSAVQRGLENLYIQL 92
N F FI R M + D + R C + +S+ + RW+N V+R + NL +
Sbjct: 72 NTFVSFIDRFMSFHSDLYLKKFKLRFFCNLNGDEVSENAHIARWINDVVKRKVHNLDLTW 131
Query: 93 FYQIFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFVHLPSLKTLQLYCLIFPEPQYVMELL 152
P ++ + C +LV LKL G+ + LP +K + L + F + L+
Sbjct: 132 GAVEIPPIL----YLCNSLVSLKLCGVTLPNLELTSLPCVKVIVLEWVKFANDLALEMLI 187
Query: 153 SGCPILEYMHLSR 165
SGC +LE + L R
Sbjct: 188 SGCLVLESLTLCR 200
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 20 RISTLPDRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNS 79
++S PD +Y ++ F+ R R R F+L+ ++ + WV +
Sbjct: 49 KVSDFPDENYASFIDNFLEFN----RKSRMR-------KFKLKYDEYTYDDDRLAGWVVT 97
Query: 80 AVQRGLENLYIQLFYQ--IFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFV-HLPSLKTLQ 136
V RG+++L + F + + I+ C TLV L L + ++ FV LPSLK +
Sbjct: 98 TVDRGIQHLDAKGFETNMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMH 157
Query: 137 LYCLIFPEPQYVME-LLSGCPILEYMHLSR 165
L + + + +ME ++SGCP+LE L R
Sbjct: 158 LEDVWYYDDPLIMEKIISGCPVLEDFVLIR 187
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 20 RISTLPDRSYLIINRSYNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLSDVNRWVNS 79
++S PD +Y ++ F+ R R R F+L+ ++ + WV +
Sbjct: 49 KVSDFPDENYASFIDNFLEFN----RKSRMR-------KFKLKYDEYTYDDDRLAGWVVT 97
Query: 80 AVQRGLENLYIQLFYQ--IFPKLIKSCIFSCKTLVVLKLFGLNVDVFSFV-HLPSLKTLQ 136
V RG+++L + F + + I+ C TLV L L + ++ FV LPSLK +
Sbjct: 98 TVDRGIQHLDAKGFETNMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMH 157
Query: 137 LYCLIFPEPQYVME-LLSGCPILEYMHLSR 165
L + + + +ME ++SGCP+LE L R
Sbjct: 158 LEDVWYYDDPLIMEKIISGCPVLEDFVLIR 187
>AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21878167-21879799 FORWARD LENGTH=473
Length = 473
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 38 GFSKFIYRTMRNRDHHQPITTFRLQCGSSH--FNLSDVNRWVNSAVQRGLENLYIQL-FY 94
F F+ R + + + P+ F L+ H + V W++ + RG+ +L++ +
Sbjct: 89 SFPDFVDRILALQGN-SPLDKFSLKMVDGHDPVDPDSVVPWIHKVLVRGVSDLHLVVDMN 147
Query: 95 QIFPKLIKSCIFSCKTLVVLKLF---GLNVDVFSFVHLPSLKTLQLYCLIFPEPQY-VME 150
+ + S IF +TLV L + G +DV VHLP LKTL L ++F E +
Sbjct: 148 EWTSDPLPSRIFLSETLVKLTIKIRDGPFIDV-KHVHLPKLKTLYLQSVMFDENDIGFRK 206
Query: 151 LLSGCPILEYMHLSRM 166
LLSGCP+LE + L M
Sbjct: 207 LLSGCPVLEELVLDGM 222
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 36 YNGFSKFIYRTMRNRDHHQPITTFRLQCGSSHFNLS------DVNRWVNSAVQRGLENLY 89
Y FS+F+YR++ + ++ P+ H NL D+ W+ A+ R L L
Sbjct: 55 YKSFSQFVYRSLLS--NNAPVIKHL------HLNLGPDCPAIDIGLWIGFALTRRLRQLK 106
Query: 90 IQLFYQIFPKL--IKSCIFSCKTLVVLKLFG-LNVDVFSFVHLPSLKTLQLYCLIFPEPQ 146
I + + S +++ TL L+L + +DV S V LPSLK L L + + +
Sbjct: 107 INIRTSSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYEDDA 166
Query: 147 YVMELLSGCPILEYMHLSR 165
+ LL GCP LE + + R
Sbjct: 167 SLPSLLFGCPNLEELFVER 185