Miyakogusa Predicted Gene

Lj0g3v0272739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0272739.1 tr|F2DD43|F2DD43_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,34.42,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.18037.1
         (261 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated ...   237   5e-63
AT3G51250.1 | Symbols:  | Senescence/dehydration-associated prot...   211   3e-55
AT4G35985.1 | Symbols:  | Senescence/dehydration-associated prot...   203   1e-52
AT3G21600.1 | Symbols:  | Senescence/dehydration-associated prot...    64   2e-10
AT3G21600.2 | Symbols:  | Senescence/dehydration-associated prot...    63   2e-10
AT4G15450.1 | Symbols:  | Senescence/dehydration-associated prot...    61   6e-10

>AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated
           protein-related | chr2:7755923-7757798 REVERSE
           LENGTH=452
          Length = 452

 Score =  237 bits (605), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/272 (50%), Positives = 173/272 (63%), Gaps = 28/272 (10%)

Query: 1   MASENPNQKNSLYPEVITDDPN-PNNPT----SSSLYPSIDVSELVENLFPE--DTSP-- 51
           M S    Q +SLYP V T +P  P NP+    +++LYPS+D+++L  NLFPE  +TS   
Sbjct: 1   MESSGDKQTSSLYPTVDTSNPEAPINPSSSSSTNNLYPSLDMNDLARNLFPEQPETSSIP 60

Query: 52  -SAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQW 110
            SAPP A E+V++K+ GAILHLIDK YSVELACGDL II + QG+NVVA+ A V DEIQW
Sbjct: 61  VSAPPAATEEVILKISGAILHLIDKSYSVELACGDLEIIRIVQGENVVAVLASVSDEIQW 120

Query: 111 PLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVM 170
           PL KDE +VKVD+SHYFF+ R  KE+                                 M
Sbjct: 121 PLTKDENSVKVDESHYFFTLRPTKEISHDSSDEEDGDGGKNTNE---------------M 165

Query: 171 LSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGE-ALDGSVAMEMTPXXXX 229
           L+YGLTIA+KGQE LL EL+++L + S+FSV EVSE+AK+ GE  LD +VA E +P    
Sbjct: 166 LNYGLTIASKGQEHLLVELEKILEDYSSFSVQEVSEEAKEAGEKVLDVTVARETSP--VE 223

Query: 230 XXXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
                      +C+AYWTTLAPNVEDYSG AA
Sbjct: 224 LTGERKEIVERQCSAYWTTLAPNVEDYSGKAA 255


>AT3G51250.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:19028227-19030442 FORWARD
           LENGTH=463
          Length = 463

 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/264 (47%), Positives = 156/264 (59%), Gaps = 26/264 (9%)

Query: 8   QKNSLYPEV---ITDDP----NPNNPTSSSLYPSIDVSELVENLFPE------DTSPSAP 54
           Q+ ++YP+V   I D+P    NP   +S  LYPS+    L  NLFP+      D SPSAP
Sbjct: 11  QRPAMYPQVDQSIPDNPFASTNPYVASSPYLYPSLSSHNLGPNLFPDHGDASNDQSPSAP 70

Query: 55  PIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAK 114
           P A E+VLI+VPGAIL+LIDK YSVELACGD TI+ + QG+N+VA+ A V +EIQWPL K
Sbjct: 71  PQATEEVLIRVPGAILNLIDKSYSVELACGDFTIVRIIQGQNIVAVLANVGNEIQWPLTK 130

Query: 115 DETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYG 174
           +E A KVD SHYFFS   PKE                               D  +L+YG
Sbjct: 131 NEVAAKVDGSHYFFSIHPPKE----------KGQGSGSDSDDEQGQKSKSKSDDEILNYG 180

Query: 175 LTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKG-EALDGSVAMEMTPXXXXXXXX 233
           LTIA+KGQE +L  LD+VL + S F+   +SEKAK+ G E L  SV  + +P        
Sbjct: 181 LTIASKGQENVLLVLDQVLRDYSCFTEQRMSEKAKETGEEVLGNSVVADTSP--EELKGE 238

Query: 234 XXXXXXXRCAAYWTTLAPNVEDYS 257
                  +CAAYWTTLAPNVEDY+
Sbjct: 239 RKDVVEGQCAAYWTTLAPNVEDYT 262


>AT4G35985.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr4:17032268-17033862 REVERSE
           LENGTH=448
          Length = 448

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/234 (47%), Positives = 147/234 (62%), Gaps = 29/234 (12%)

Query: 31  LYPSIDVSELVENLFPEDT---SPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLT 87
           LYPSI+V++LV N+FP+ T   S SAPP+A E+V++ + GA++HLIDK YSVELACGDL 
Sbjct: 38  LYPSINVNDLVNNIFPDPTASDSASAPPLATEEVILTIHGAMVHLIDKSYSVELACGDLE 97

Query: 88  IICLRQGKNVVAIYARVDDEIQWPLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXX 147
           I+ L QG   VA++ARV DEIQWPL KDE AVKVD+SHYFFS R  KE            
Sbjct: 98  ILRLVQGDITVAVFARVGDEIQWPLTKDEPAVKVDESHYFFSLRPVKESESSDHSVNETE 157

Query: 148 XXXXXXXXXXXXXXXXXXXDLVMLSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEK 207
                                 ML+YGLT+A+KGQE +L++LD++L + S+F+    +E+
Sbjct: 158 NE--------------------MLNYGLTMASKGQEPMLEKLDKILADYSSFT----AEE 193

Query: 208 AKKKGEALDGSVAMEMTPXXXXXXXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
            +K+   LD + A E +P               +C AYWTTLAPNVEDYSG+AA
Sbjct: 194 KQKEENVLDLTAAKETSP--EELKGKRKKMVEKQCTAYWTTLAPNVEDYSGVAA 245


>AT3G21600.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:7606735-7608364 REVERSE
           LENGTH=374
          Length = 374

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 50  SPSAPP--IAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDE 107
           +PS  P  + AE+VL+++P   +HLI +  +VELA GD  ++ +      +A+  R+  +
Sbjct: 24  NPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHD 83

Query: 108 IQWPLAKDETAVKVDDSHYFFSFRV 132
           +QWP+ +DE  VK+D   Y F+  V
Sbjct: 84  LQWPVIRDEPVVKLDARDYLFTLPV 108


>AT3G21600.2 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:7607077-7608364 REVERSE
           LENGTH=299
          Length = 299

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 50  SPSAPP--IAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDE 107
           +PS  P  + AE+VL+++P   +HLI +  +VELA GD  ++ +      +A+  R+  +
Sbjct: 24  NPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHD 83

Query: 108 IQWPLAKDETAVKVDDSHYFFSFRV 132
           +QWP+ +DE  VK+D   Y F+  V
Sbjct: 84  LQWPVIRDEPVVKLDARDYLFTLPV 108


>AT4G15450.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr4:8839437-8841162 FORWARD
           LENGTH=381
          Length = 381

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%)

Query: 47  EDTSPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDD 106
           +D   S+    +++VL+++ G   HLI+   +VELA GD  ++ +      +A+  R+ +
Sbjct: 23  QDAMYSSYGTVSDEVLLQIHGCRAHLINGSEAVELAAGDFELVQVLDSNVALAMVVRIGN 82

Query: 107 EIQWPLAKDETAVKVDDSHYFFSF 130
           ++QWP+ KDE  VK+D   Y F+ 
Sbjct: 83  DLQWPVIKDEPVVKLDSRDYLFTL 106