Miyakogusa Predicted Gene

Lj0g3v0271849.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271849.3 CUFF.18097.3
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   615   e-176
AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   615   e-176
AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   579   e-165
AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase | ...   389   e-108

>AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  615 bits (1585), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/373 (77%), Positives = 325/373 (87%), Gaps = 5/373 (1%)

Query: 38  KFSLTCXXXXXXXDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSET 97
           KF + C       DPLLVKAA+G  +SRPPAWMMRQAGRYMAVY+KLA+KHPSFRERSE 
Sbjct: 48  KFVVACSSSSS--DPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSEN 105

Query: 98  TDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKAL 157
           TDLIVEISLQPW+AFRPDGVIIFSDILTPLPAFG+ FDIE+V+GPVIQSPIR+EE +K L
Sbjct: 106 TDLIVEISLQPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRL 165

Query: 158 HSIDLDRLRFVGDSLKLLRQEAGGHAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHT 217
           H ID ++L+FVGDSLK+LR+E G HAAVLGFVGAPWT+ATYIVEGGTTRTYT IK+MCHT
Sbjct: 166 HPIDFEKLQFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHT 225

Query: 218 APDILRTLLSHLSQAIADYIVFQVESGAHCIQIFDSWGGQLPPSMWESWSKPYITEIVKV 277
           APD+LR LLSHL++AI +Y+V+QVE GAHCIQIFDSWGGQL P MWE WSKPYI EI+  
Sbjct: 226 APDVLRALLSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHA 285

Query: 278 VKKKCPETPIVLYINGNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPA 337
           VKK+CP+TPIV YINGNGGLLERM  TG DVIGLDWTVDMADGRRRLGS + VQGNVDPA
Sbjct: 286 VKKRCPDTPIVFYINGNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPA 345

Query: 338 SLFSPLSSLTEEIQRVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLKFDTHFQN 397
            LFSPL +LTEEI+RVVKCAGP+GHILNLGHGVLVGTPEEAVAHFFE AR+L + T FQN
Sbjct: 346 YLFSPLPALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNLDYQTLFQN 405

Query: 398 ---TTANDPELVI 407
                  +PELV+
Sbjct: 406 HVPAEKAEPELVV 418


>AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  615 bits (1585), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/373 (77%), Positives = 325/373 (87%), Gaps = 5/373 (1%)

Query: 38  KFSLTCXXXXXXXDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSET 97
           KF + C       DPLLVKAA+G  +SRPPAWMMRQAGRYMAVY+KLA+KHPSFRERSE 
Sbjct: 48  KFVVACSSSSS--DPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSEN 105

Query: 98  TDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKAL 157
           TDLIVEISLQPW+AFRPDGVIIFSDILTPLPAFG+ FDIE+V+GPVIQSPIR+EE +K L
Sbjct: 106 TDLIVEISLQPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRL 165

Query: 158 HSIDLDRLRFVGDSLKLLRQEAGGHAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHT 217
           H ID ++L+FVGDSLK+LR+E G HAAVLGFVGAPWT+ATYIVEGGTTRTYT IK+MCHT
Sbjct: 166 HPIDFEKLQFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHT 225

Query: 218 APDILRTLLSHLSQAIADYIVFQVESGAHCIQIFDSWGGQLPPSMWESWSKPYITEIVKV 277
           APD+LR LLSHL++AI +Y+V+QVE GAHCIQIFDSWGGQL P MWE WSKPYI EI+  
Sbjct: 226 APDVLRALLSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHA 285

Query: 278 VKKKCPETPIVLYINGNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPA 337
           VKK+CP+TPIV YINGNGGLLERM  TG DVIGLDWTVDMADGRRRLGS + VQGNVDPA
Sbjct: 286 VKKRCPDTPIVFYINGNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPA 345

Query: 338 SLFSPLSSLTEEIQRVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLKFDTHFQN 397
            LFSPL +LTEEI+RVVKCAGP+GHILNLGHGVLVGTPEEAVAHFFE AR+L + T FQN
Sbjct: 346 YLFSPLPALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNLDYQTLFQN 405

Query: 398 ---TTANDPELVI 407
                  +PELV+
Sbjct: 406 HVPAEKAEPELVV 418


>AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5021290-5022577 FORWARD LENGTH=341
          Length = 341

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 272/341 (79%), Positives = 304/341 (89%), Gaps = 3/341 (0%)

Query: 70  MMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPA 129
           MMRQAGRYMAVY+KLA+KHPSFRERSE TDLIVEISLQPW+AFRPDGVIIFSDILTPLPA
Sbjct: 1   MMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPA 60

Query: 130 FGIEFDIEDVRGPVIQSPIRSEEGLKALHSIDLDRLRFVGDSLKLLRQEAGGHAAVLGFV 189
           FG+ FDIE+V+GPVIQSPIR+EE +K LH ID ++L+FVGDSLK+LR+E G HAAVLGFV
Sbjct: 61  FGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFEKLQFVGDSLKILRREVGEHAAVLGFV 120

Query: 190 GAPWTLATYIVEGGTTRTYTTIKSMCHTAPDILRTLLSHLSQAIADYIVFQVESGAHCIQ 249
           GAPWT+ATYIVEGGTTRTYT IK+MCHTAPD+LR LLSHL++AI +Y+V+QVE GAHCIQ
Sbjct: 121 GAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLTKAITEYVVYQVEHGAHCIQ 180

Query: 250 IFDSWGGQLPPSMWESWSKPYITEIVKVVKKKCPETPIVLYINGNGGLLERMVDTGVDVI 309
           IFDSWGGQL P MWE WSKPYI EI+  VKK+CP+TPIV YINGNGGLLERM  TG DVI
Sbjct: 181 IFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYINGNGGLLERMKGTGADVI 240

Query: 310 GLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLSSLTEEIQRVVKCAGPRGHILNLGHG 369
           GLDWTVDMADGRRRLGS + VQGNVDPA LFSPL +LTEEI+RVVKCAGP+GHILNLGHG
Sbjct: 241 GLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIERVVKCAGPKGHILNLGHG 300

Query: 370 VLVGTPEEAVAHFFEVARSLKFDTHFQN---TTANDPELVI 407
           VLVGTPEEAVAHFFE AR+L + T FQN       +PELV+
Sbjct: 301 VLVGTPEEAVAHFFETARNLDYQTLFQNHVPAEKAEPELVV 341


>AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase |
           chr2:16912961-16914988 FORWARD LENGTH=394
          Length = 394

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 181/342 (52%), Positives = 244/342 (71%), Gaps = 1/342 (0%)

Query: 51  DPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWK 110
           +PLL++A +G+ V RPP W+MRQAGRYM  Y+ L EK+PSFR+RSE  DL+VEISLQPWK
Sbjct: 53  EPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWK 112

Query: 111 AFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHS-IDLDRLRFVG 169
            F+PDGVI+FSDILTPL    I FDI   +GP+I +P +S   +  +   +  + + +VG
Sbjct: 113 VFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVG 172

Query: 170 DSLKLLRQEAGGHAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHTAPDILRTLLSHL 229
           ++L+ LR E    AAVLGFVGAP+TL++Y++EGG+++ +T IK +  + P +L  LL   
Sbjct: 173 EALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKF 232

Query: 230 SQAIADYIVFQVESGAHCIQIFDSWGGQLPPSMWESWSKPYITEIVKVVKKKCPETPIVL 289
           + ++  YI +Q +SGA  +QIFDSW  +L P  +E +S PY+ +IV+ VK+  P  P++L
Sbjct: 233 TTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLIL 292

Query: 290 YINGNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLSSLTEE 349
           Y +G+GGLLER+  TGVDV+ LDWTVDMA+GR RLG  I VQGNVDP  LF     +T  
Sbjct: 293 YASGSGGLLERLARTGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITSR 352

Query: 350 IQRVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLKF 391
           I   VK AG   HILNLGHG+ VGTPEE VAHFFEVA+ +++
Sbjct: 353 IHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQEIRY 394