Miyakogusa Predicted Gene

Lj0g3v0271799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271799.1 Non Chatacterized Hit- tr|I3SNY5|I3SNY5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,64.86,2e-16,seg,NULL; DnaJ/Hsp40 cysteine-rich domain,Heat shock
protein DnaJ, cysteine-rich domain,CUFF.17966.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24860.1 | Symbols:  | DnaJ/Hsp40 cysteine-rich domain superf...   167   4e-42

>AT2G24860.1 | Symbols:  | DnaJ/Hsp40 cysteine-rich domain
           superfamily protein | chr2:10587118-10588240 REVERSE
           LENGTH=144
          Length = 144

 Score =  167 bits (422), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 91/99 (91%), Gaps = 3/99 (3%)

Query: 52  IRVSMVDS---SSNFAKRIERAWLISQQPTPIVCSSCNSKGHIECKWCAGTGFFIIGDNM 108
           ++ S VDS   SSNFAKR+++AW+ISQQP+P+ CSSCNSKGH+ECKWCAGTGFFI+GDNM
Sbjct: 43  VKASAVDSPESSSNFAKRMDQAWIISQQPSPVGCSSCNSKGHVECKWCAGTGFFILGDNM 102

Query: 109 LCEVPSRNTSCIICTGKGSTCCSNCQGTGFRAKWLEEPP 147
           LC+VPSRNTSC+IC+G+GS  CS+C+GTGFRAKWLE+PP
Sbjct: 103 LCQVPSRNTSCVICSGQGSASCSDCKGTGFRAKWLEKPP 141