Miyakogusa Predicted Gene

Lj0g3v0271699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271699.1 Non Chatacterized Hit- tr|I1M6X0|I1M6X0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57246
PE,34.72,0.000000000000003,coiled-coil,NULL; seg,NULL,CUFF.17961.1
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06530.1 | Symbols:  | Tropomyosin-related | chr1:2001625-200...    58   3e-09
AT3G58840.2 | Symbols:  | Tropomyosin-related | chr3:21757499-21...    56   1e-08
AT3G58840.1 | Symbols:  | Tropomyosin-related | chr3:21757499-21...    56   1e-08

>AT1G06530.1 | Symbols:  | Tropomyosin-related |
           chr1:2001625-2002596 FORWARD LENGTH=323
          Length = 323

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 53/75 (70%)

Query: 51  IEDLEREVKELRQGNTEKEMKVRELERMLGVVQMTEVEERSKRVRAEEEMREKVDEKDRE 110
           IE+LE+EV  LR    E E +++ELE  LG +++ E++E++K+ RAEEEMREK+D K++E
Sbjct: 146 IEELEKEVAGLRTVKEENEKRMKELESKLGALEVKELDEKNKKFRAEEEMREKIDNKEKE 205

Query: 111 IEGFLQEIQEFEEKI 125
           +    ++I+  E  +
Sbjct: 206 VHDLKEKIKSLESDV 220


>AT3G58840.2 | Symbols:  | Tropomyosin-related |
           chr3:21757499-21758455 REVERSE LENGTH=318
          Length = 318

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 49/63 (77%)

Query: 50  RIEDLEREVKELRQGNTEKEMKVRELERMLGVVQMTEVEERSKRVRAEEEMREKVDEKDR 109
           ++E  E+E + LR+   E E +VR+LER +GV+++ E+EE+SK++R+EEEMRE  DEK R
Sbjct: 136 KLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEEEMREIDDEKKR 195

Query: 110 EIE 112
           EIE
Sbjct: 196 EIE 198


>AT3G58840.1 | Symbols:  | Tropomyosin-related |
           chr3:21757499-21758455 REVERSE LENGTH=318
          Length = 318

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 49/63 (77%)

Query: 50  RIEDLEREVKELRQGNTEKEMKVRELERMLGVVQMTEVEERSKRVRAEEEMREKVDEKDR 109
           ++E  E+E + LR+   E E +VR+LER +GV+++ E+EE+SK++R+EEEMRE  DEK R
Sbjct: 136 KLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEEEMREIDDEKKR 195

Query: 110 EIE 112
           EIE
Sbjct: 196 EIE 198