Miyakogusa Predicted Gene

Lj0g3v0271599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271599.1 CUFF.17952.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56260.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   249   5e-67
AT5G16450.2 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   226   6e-60
AT5G16450.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   226   6e-60
AT3G02770.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   222   9e-59

>AT5G56260.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:22775549-22776049 REVERSE LENGTH=166
          Length = 166

 Score =  249 bits (637), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 119/165 (72%), Positives = 139/165 (84%)

Query: 1   MAALPTADICDSNAASLVNGDVRILHPVFQSYGQTRAFSGPVVTVKVLEDNVLVREVLEM 60
           MAA  TA+ CDSNA  + NGD+R LHP+F+ YGQ R FSGP+VT+KV EDNVLVR  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRALAS 120
           KGEG VLVIDGGGSMRCAL+GGN+ +LAQ+ GW+G+VVNGCVRDVDEIN+CD GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 YPLKSGKKGTGEKHVPVYVAGALIHEGEWLYADNDGILVSKFELS 165
            PLKS KKG GEK+VPV++ G LI +GEWLYAD+DGIL+SK ELS
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELS 165


>AT5G16450.2 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:5374357-5375342 FORWARD LENGTH=166
          Length = 166

 Score =  226 bits (575), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 106/165 (64%), Positives = 132/165 (80%)

Query: 1   MAALPTADICDSNAASLVNGDVRILHPVFQSYGQTRAFSGPVVTVKVLEDNVLVREVLEM 60
           MA + TA++CD+N   + +G +R L P+FQ YG+ + FSGPVVTVKV EDN L+R+ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRALAS 120
           KG GRVLV+DGGGS RCA++GGN V  AQ+ GWAG+VVNGC+RDVDEIN CD GVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 YPLKSGKKGTGEKHVPVYVAGALIHEGEWLYADNDGILVSKFELS 165
           +P+K+ KKG GE+ VPV +AG  I +GEWLYAD DGILVS+ ELS
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELS 165


>AT5G16450.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:5374357-5375342 FORWARD LENGTH=166
          Length = 166

 Score =  226 bits (575), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 106/165 (64%), Positives = 132/165 (80%)

Query: 1   MAALPTADICDSNAASLVNGDVRILHPVFQSYGQTRAFSGPVVTVKVLEDNVLVREVLEM 60
           MA + TA++CD+N   + +G +R L P+FQ YG+ + FSGPVVTVKV EDN L+R+ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRALAS 120
           KG GRVLV+DGGGS RCA++GGN V  AQ+ GWAG+VVNGC+RDVDEIN CD GVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 YPLKSGKKGTGEKHVPVYVAGALIHEGEWLYADNDGILVSKFELS 165
           +P+K+ KKG GE+ VPV +AG  I +GEWLYAD DGILVS+ ELS
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELS 165


>AT3G02770.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr3:601017-601884 REVERSE LENGTH=166
          Length = 166

 Score =  222 bits (565), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 105/165 (63%), Positives = 131/165 (79%)

Query: 1   MAALPTADICDSNAASLVNGDVRILHPVFQSYGQTRAFSGPVVTVKVLEDNVLVREVLEM 60
           MA + TA++CD+N   + +G +R L PVFQ YG+ + FSGPVVTVKV EDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRALAS 120
           KG GRVLV+DGGGS+RCA++GGN V  AQ+ GWAG++VNGC+RDVDEIN CD GVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 YPLKSGKKGTGEKHVPVYVAGALIHEGEWLYADNDGILVSKFELS 165
           +P+K+ KKG GE+ V + +AG  I +GEWLYAD DGILVS+ ELS
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELS 165