Miyakogusa Predicted Gene
- Lj0g3v0271549.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0271549.1 tr|G7J375|G7J375_MEDTR Pre-mRNA splicing factor
ATP-dependent RNA helicase-like protein OS=Medicago ,78.82,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
RING/U-box,NULL; Eukaryotic typ,CUFF.18007.1
(1604 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 1782 0.0
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 1771 0.0
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 370 e-102
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 332 1e-90
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 332 1e-90
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 329 1e-89
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 321 3e-87
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 302 1e-81
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 290 8e-78
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 289 9e-78
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 288 2e-77
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 287 4e-77
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 258 3e-68
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 148 3e-35
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 145 2e-34
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 143 1e-33
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 6e-33
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 136 1e-31
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 133 9e-31
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 129 1e-29
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 2e-28
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 3e-28
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 114 8e-25
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 113 1e-24
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 79 2e-14
AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 76 2e-13
AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 73 1e-12
AT3G53690.1 | Symbols: | RING/U-box superfamily protein | chr3:... 71 8e-12
AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 70 1e-11
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pro... 69 4e-11
AT5G37560.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 4e-11
AT3G14250.1 | Symbols: | RING/U-box superfamily protein | chr3:... 68 6e-11
AT2G25370.1 | Symbols: | RING/U-box superfamily protein | chr2:... 66 2e-10
AT2G25370.2 | Symbols: | RING/U-box superfamily protein | chr2:... 65 5e-10
AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 64 7e-10
AT2G25360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 8e-10
AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily p... 63 2e-09
AT3G27720.1 | Symbols: ARI4, ATARI4 | IBR domain containing prot... 63 2e-09
AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily pro... 62 3e-09
AT2G19610.2 | Symbols: | RING/U-box superfamily protein | chr2:... 61 6e-09
AT4G19670.2 | Symbols: | RING/U-box superfamily protein | chr4:... 60 1e-08
AT4G19670.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 1e-08
AT3G45470.1 | Symbols: | IBR domain containing protein | chr3:1... 60 1e-08
AT2G19610.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 6e-08
AT2G21420.1 | Symbols: | IBR domain containing protein | chr2:9... 57 8e-08
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily p... 57 9e-08
AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 57 9e-08
AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 56 3e-07
AT2G16090.1 | Symbols: ARI2, ATARI2 | RING/U-box superfamily pro... 55 5e-07
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | c... 55 6e-07
AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily pro... 55 6e-07
AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing prot... 54 7e-07
AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily pro... 53 2e-06
AT3G45460.1 | Symbols: | IBR domain containing protein | chr3:1... 52 3e-06
AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 51 5e-06
AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-1... 51 7e-06
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 1782 bits (4615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 883/1565 (56%), Positives = 1122/1565 (71%), Gaps = 19/1565 (1%)
Query: 50 VSKSLRNPLPIGVFPQQLEKKKGLEVEKDLVERRIKEFESAMRCILQYLENNDM------ 103
VS S + L VF EKKK +E E+DLV R++EF +AM+ IL+YL D
Sbjct: 215 VSFSSKRGLKFEVF----EKKKAIEAERDLVVNRLEEFNNAMKSILRYLIGQDGYEFDLD 270
Query: 104 EEGEGFVPIFRFDGSLDWKHIQSXXXXXXXXXXXXXXXYAYRRDILRQIHYQQIMVLIGE 163
+E EG V +F +G+ DW+ I YAYRR IL++IH +QIMVLIGE
Sbjct: 271 DEEEGDVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGE 330
Query: 164 TGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLTQRVQEESSGCYGDNAIKCYSMF 223
TGSGKSTQLVQFLADSG+ A E IVCTQPRKIAA +L RV+EESSGCY +N + C F
Sbjct: 331 TGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTF 390
Query: 224 SSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAHERSXXXXXXXXXXXXXXGRR 283
SS+ + S++ +MTD+CLLQH M D++L G+SC++IDEAHERS RR
Sbjct: 391 SSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRR 450
Query: 284 VKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXX-X 342
+ LR++IMSATADAKQLS YF+ CGI V GR FPVE+ Y+PSDT
Sbjct: 451 IDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGD 510
Query: 343 XXRMATEIHKREKEGTILAFLTSQAEVEWACEKFTALSAVALPLHGKLSSEEQFHVFQSF 402
+MA EIHK EKEGTILAFLTSQAEVEWACE+F SA+ALPLHGKLS EEQF VFQ+
Sbjct: 511 VVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPSAIALPLHGKLSFEEQFRVFQNH 570
Query: 403 PGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAG 462
PG+RKVIF+TN+AETSLTIPGVKYVIDSG+VK+S+++P +GM++LKV +S+SSA QRAG
Sbjct: 571 PGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAG 630
Query: 463 RAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPS 522
RAGRTEPG+CYRLYS+ D+ SM LNQEPEIRRVHLGVA+LR+LALGV N+ +F+FVDAP
Sbjct: 631 RAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPV 690
Query: 523 PSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIA 582
P +I MA++NL+QL + N VHELT+EG LVKLG+EP+LGKLILGC +H + +EGI
Sbjct: 691 PEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIV 750
Query: 583 LASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWC 642
LA++M NASSIFCRVGN DK ++D KVQFC+++GDLFTLLSVY EW +LP ER+NKWC
Sbjct: 751 LAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWC 810
Query: 643 WENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAE 702
WENS+NAKSMRRC DT +PS W W+P + + HD ++K VIL+SLAE
Sbjct: 811 WENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAE 870
Query: 703 NVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFD 762
NVA Y+G NQLGYEVA TG+ VQLHPSCSLL F ++P WVVFGELLS+ ++YLVCV+A D
Sbjct: 871 NVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACD 930
Query: 763 FQSLHGLHPPPLFDVSKMEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMD 822
F++L+ L PPP FDVS+M+ER+L++K + G + +L+RFCGK+N +LL +VSR R C D
Sbjct: 931 FEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKRFCGKSNRSLLSIVSRARSLCSD 990
Query: 823 ERIFIQVNVDQHDVQLYATSHNMNTALRWVDDVLECEKKWLRAECMEKCLYHGSGFSPPV 882
ERI IQV+VDQ++++LYA +M V+D LECEKKW+ EC+EK LYHG G P+
Sbjct: 991 ERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEKKWMHNECLEKYLYHGRG-QVPI 1049
Query: 883 ALFGSGAGIKHLELEKRSLSVDVYHPNISAIDDKELLMFFEKNTSCCICSVHKFTGMAKD 942
ALFGSGA IKHLE+++R L+VDV + +DD+ELL F EK ICS++KF +D
Sbjct: 1050 ALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLTFLEKKIDGSICSIYKFAANKQD 1109
Query: 943 VGDGEKWGRITFLSPDAAKRAAELDGEEFSGSSLKIVPSQSATGG--SKPFSFPAVKAKI 1000
+ EKWGRITFL+P++A +A E+ F GS LK+ PS S GG P+ F +V AKI
Sbjct: 1110 CDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFPSLSTGGGIFKMPY-FSSVTAKI 1168
Query: 1001 YWPRRLSKGVAIVKCDIQDVRFILSEFYNLAIGGRYVRCQISNKCADSVVISGFAKELSE 1060
WPRR S G +KC D+ IL + +L IG YV Q + DS++ISG +LSE
Sbjct: 1169 RWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHIQRDQQSNDSILISGLG-DLSE 1227
Query: 1061 GEVFDVIRTATSRRILDFFLVRGE-AVGNPPCSACEEALLKEISPLMPKRNPHIGSCRVQ 1119
EV DV+ T RR L+FF+ R + +V P +ACEE L K I M +NP +VQ
Sbjct: 1228 AEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSAKNPEPNCVQVQ 1287
Query: 1120 VFPPEQKDAFMRALITFDGRLHLEAAKALETIEGKMLPGFLSWQKINCQQLFNSSLTFPH 1179
VF P++ + FMRALI FDGRLH EAAKAL+ + G++LPG L WQKI C+QLF SS+
Sbjct: 1288 VFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPGCLPWQKIKCEQLFQSSIICSA 1347
Query: 1180 PVYRVIKEQLEKVLASFNNLKGLEWNLDKIANGSHRVRITANATKTVAEVRRPLEELSRG 1239
+Y +K QL +LA F KG E L+ NG++RV+ITA AT+ VAE+RR LEEL RG
Sbjct: 1348 SIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVAEMRRELEELLRG 1407
Query: 1240 KTIEHNSLTPAVLELMCSRDGCSIRSSIQQETGTYILFDRHNQNLRIFGSPDKIDLAQQK 1299
+ I H T VL+ + SRDG ++ IQQET TYIL DRHN +RI G+ +KI A+Q+
Sbjct: 1408 RPINHPGFTRRVLQHLMSRDGINLMRKIQQETETYILLDRHNLTVRICGTSEKIAKAEQE 1467
Query: 1300 LIQSLLSLHEGRQLVIHLRGKDLPPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQI 1359
LIQ+L+ HE +QL IHLRG ++ PDLMK+VVK FGP+L G+K+KV GVDL LNTR I
Sbjct: 1468 LIQALMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHGVDLKLNTRYHVI 1527
Query: 1360 FLHGNKELKPRVEETILEIARSSNDLVKRHD-TGPSCPICLCEVEDGYQLEGCGHLFCRL 1418
+HG+KE++ V++ + E+AR + L ++ D CPICL EV+DGY LEGC HLFC+
Sbjct: 1528 QVHGSKEMRQEVQKMVNELAREKSALGEKPDEIEVECPICLSEVDDGYSLEGCSHLFCKA 1587
Query: 1419 CLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGG 1478
CL+EQ E++++N FPI CS CG PI+L D+R+ L +KL+ELF ASL +FV +S G
Sbjct: 1588 CLLEQFEASMRNFDAFPILCSHIDCGAPIVLADMRALLSQEKLDELFSASLSSFVTSSDG 1647
Query: 1479 TYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDPD 1538
+RFC +PDCPS+YRVA P GEPF+CGAC+SE CTRCHLEYHP ++CERYK+FK++PD
Sbjct: 1648 KFRFCSTPDCPSVYRVAGPQESGEPFICGACHSEICTRCHLEYHPLITCERYKKFKENPD 1707
Query: 1539 LSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVCLEIFMSSDECYNHLRT 1598
LSLK+W KGK VK C C IEK DGCNH++C+CGKH+CW CL++F + CY HLRT
Sbjct: 1708 LSLKDWAKGK-NVKECPICKSTIEKTDGCNHMKCRCGKHICWTCLDVFTQEEPCYAHLRT 1766
Query: 1599 IHLAI 1603
IH I
Sbjct: 1767 IHGGI 1771
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 1771 bits (4588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1548 (56%), Positives = 1114/1548 (71%), Gaps = 15/1548 (0%)
Query: 67 LEKKKGLEVEKDLVERRIKEFESAMRCILQYLENNDMEE------GEGFVPIFRFDGSLD 120
EKKK LE E+DLV R+ EF +AM+ IL+YL D E + V +F +G+ D
Sbjct: 225 FEKKKALEAERDLVVNRLDEFNNAMKSILRYLIGQDGYEFDVDDEDDEDVAVFSLEGAYD 284
Query: 121 WKHIQSXXXXXXXXXXXXXXXYAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSG 180
W+ I YAYRR IL++IH +QIMVLIGETGSGKSTQLVQFLADSG
Sbjct: 285 WRRIHYLILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSG 344
Query: 181 IGADECIVCTQPRKIAAKSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHC 240
+ A E IVCTQPRKIAA +LT RV+EESSGCY +N + C FSS+ + S++ +MTD+C
Sbjct: 345 VAASESIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNC 404
Query: 241 LLQHCMSDKNLFGVSCIVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQL 300
LLQH M D++L G+SC++IDEAHERS RR+ LR++IMSATADA QL
Sbjct: 405 LLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQL 464
Query: 301 SDYFYCCGIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXX-XXXRMATEIHKREKEGTI 359
S Y + CGI V GR FPVE+ Y+PS T +MA EIHK EKEGTI
Sbjct: 465 SQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTI 524
Query: 360 LAFLTSQAEVEWACEKFTALSAVALPLHGKLSSEEQFHVFQSFPGKRKVIFSTNLAETSL 419
LAFLTSQAEVEWACE+F A SA+ALPLHGKLS EEQF VFQ++PG+RKVIF+TN+AETSL
Sbjct: 525 LAFLTSQAEVEWACERFVAPSAIALPLHGKLSFEEQFMVFQNYPGRRKVIFATNIAETSL 584
Query: 420 TIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEA 479
TIPGVKYVIDSG+VK+S+++P +GM++LKV +S+SSA QRAGRAGRTEPG+CYRLYS+
Sbjct: 585 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKT 644
Query: 480 DYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVI 539
D+ SM LNQEPEIRRVHLGVA+LR+LALG+ N+ F+FVDAP P +I MAI+NL+QL +
Sbjct: 645 DFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAV 704
Query: 540 KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGN 599
N V ELT+EG LVKLG+EP+LGKLILGC +H + +EGI LA++M NASSIFCRVGN
Sbjct: 705 VEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGN 764
Query: 600 EGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTY 659
DK ++D KVQFC+ +GDLFTLLSVY EW +LP +R+NKWCWENS+NAKSMRRC DT
Sbjct: 765 FDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTV 824
Query: 660 XXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 719
+PS W W+P + + HD +K VIL+SLAENVA Y+G +QLGYEVA
Sbjct: 825 KELEICIERELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVAL 884
Query: 720 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHPPPLFDVSK 779
T + VQLHPSCSLL F ++P WVVFGELLS+ ++YLVCV+AFDF++L+ L PPP FD S+
Sbjct: 885 TSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQ 944
Query: 780 MEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMDERIFIQVNVDQHDVQLY 839
M+ER+L++K + G + +L+RFCGK+N +LL +VSR R C DERI IQV+VDQ++++LY
Sbjct: 945 MDERRLRVKKVVGCSSTVLKRFCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLY 1004
Query: 840 ATSHNMNTALRWVDDVLECEKKWLRAECMEKCLYHGSGFSPPVALFGSGAGIKHLELEKR 899
A+ +M V+D LECEKKW+R EC+EK L+HG G P+ALFGSGA IKHLE+++R
Sbjct: 1005 ASPLDMEKVSALVNDALECEKKWMRNECLEKYLFHGRG-QIPIALFGSGAQIKHLEVDQR 1063
Query: 900 SLSVDVYHPNISAIDDKELLMFFEKNTSCCICSVHKFTGMAKDVGDGEKWGRITFLSPDA 959
L+VDV++ +DD+ELL F EK CICS++KF +D + EKWGRITFL+P++
Sbjct: 1064 FLTVDVHYYGDDVVDDRELLTFLEKKIDGCICSIYKFAANKQDCDEKEKWGRITFLTPES 1123
Query: 960 AKRAAELDGEEFSGSSLKIVPSQSATGG--SKPFSFPAVKAKIYWPRRLSKGVAIVKCDI 1017
A +A E+ +F GS LK+ PS S GG P+ F +V AKI WPR+ S G +KC
Sbjct: 1124 AMKATEIQKFDFKGSVLKVFPSLSTGGGIFKMPY-FSSVTAKIRWPRKESSGRGCLKCPS 1182
Query: 1018 QDVRFILSEFYNLAIGGRYVRCQISNKCADSVVISGFAKELSEGEVFDVIRTATSRRILD 1077
D+ IL + +L IG YV Q DS++ISG +LSE EV DV+ T RR L+
Sbjct: 1183 GDIHSILGDITSLEIGTNYVHIQRDQLSNDSILISGLG-DLSEAEVLDVLEFRTQRRDLN 1241
Query: 1078 FFLVRGE-AVGNPPCSACEEALLKEISPLMPKRNPHIGSCRVQVFPPEQKDAFMRALITF 1136
FF+ R + +V P +ACEE L K I M +NP +VQVF P++ + FMRALI F
Sbjct: 1242 FFIFRKKYSVQCPSPTACEEELHKRIFARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKF 1301
Query: 1137 DGRLHLEAAKALETIEGKMLPGFLSWQKINCQQLFNSSLTFPHPVYRVIKEQLEKVLASF 1196
DGRLHLEAAKAL+ + G++LPG L WQKI C+QLF SS+ +Y +K QL +LA F
Sbjct: 1302 DGRLHLEAAKALQELNGEVLPGCLPWQKIKCEQLFQSSIICSASIYNTVKRQLNVLLARF 1361
Query: 1197 NNLKGLEWNLDKIANGSHRVRITANATKTVAEVRRPLEELSRGKTIEHNSLTPAVLELMC 1256
KG E L+ NG++RV+ITA AT+ VAE+RR LEEL RGK I H TP V++ +
Sbjct: 1362 ERQKGGECCLEPTHNGAYRVKITAYATRPVAEMRRELEELLRGKPINHPGFTPRVVQHLM 1421
Query: 1257 SRDGCSIRSSIQQETGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQLVIH 1316
SRDG ++ IQQET TYIL DRHN +RI G+ +KI A+Q+L+QSL+ HE +QL IH
Sbjct: 1422 SRDGINLMRKIQQETETYILLDRHNLTVRICGTSEKIAKAEQELVQSLMDYHESKQLEIH 1481
Query: 1317 LRGKDLPPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEETIL 1376
LRG ++ PDLMK+VVK FGP+L G+K+KV GVDL LNTR I +HG+KE++ V++ +
Sbjct: 1482 LRGPEIRPDLMKEVVKRFGPELQGIKEKVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVN 1541
Query: 1377 EIARSSNDLVKRHD-TGPSCPICLCEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFP 1435
E+AR + L ++ D CPICL EV+DGY LEGC HLFC+ CL+EQ E++++N FP
Sbjct: 1542 ELAREKSALGEKPDEIELECPICLSEVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFP 1601
Query: 1436 ICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVA 1495
I CS CG PI++ D+R+ L +KL+EL ASL AFV +S G RFC +PDCPSIYRVA
Sbjct: 1602 ILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVA 1661
Query: 1496 DPDTGGEPFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDPDLSLKEWCKGKEQVKSCS 1555
P GEPF+CGAC+SETCTRCHLEYHP ++CERYK+FK++PDLSLK+W KGK+ VK C
Sbjct: 1662 GPQESGEPFICGACHSETCTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKD-VKECP 1720
Query: 1556 ACGYVIEKVDGCNHVECKCGKHVCWVCLEIFMSSDECYNHLRTIHLAI 1603
C IEK DGCNH++C+CGKH+CW CL++F ++ CY HLRTIH I
Sbjct: 1721 ICKSTIEKTDGCNHLQCRCGKHICWTCLDVFTQAEPCYAHLRTIHGGI 1768
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 349/658 (53%), Gaps = 43/658 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
Y ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AA S+
Sbjct: 518 YKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVA 577
Query: 202 QRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDE 261
+RV EE GC + F D+ I +MTD LL+ + D+NL S I++DE
Sbjct: 578 KRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDE 636
Query: 262 AHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 321
AHER+ RR+ LR+I+ SAT DA++ S YF+ C IF + GR FPVE+
Sbjct: 637 AHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 696
Query: 322 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWAC----EKFT 377
Y +IH E EG IL FLT Q E++ AC E+
Sbjct: 697 LYTKQPETDYLDAALIT--------VLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMK 748
Query: 378 ALSA-----VALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSG 431
L + LP++ L SE Q +F P GKRKV+ +TN+AE SLTI G+ YV+D G
Sbjct: 749 GLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPG 808
Query: 432 LVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQEP 490
K + ++P G+ L ++ IS++SA QRAGRAGRT PGKCYRLY+E+ Y++ M P
Sbjct: 809 FAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIP 868
Query: 491 EIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTR 550
EI+R++LG+ L + A+G+ ++ FDF+D P P ++ A+ L L + + LT+
Sbjct: 869 EIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGAL---DEEGLLTK 925
Query: 551 EGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHK 610
GR + + +EP L K++L E + + + M +IF R + + ++D +
Sbjct: 926 LGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIA-MIQTGNIFYRPREK--QAQADQKR 982
Query: 611 VQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXXXXX 670
+F +GD TLL+VY W+A WC+EN I ++S+RR D
Sbjct: 983 AKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQDVRKQLLSIM---- 1036
Query: 671 XXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSC 730
++ D + T ++K I + + A Q GY + V +HPS
Sbjct: 1037 -----DKYKLDVVTAGKNFTKIRKAITAGFFFHGARKD--PQEGYRTLVENQPVYIHPSS 1089
Query: 731 SLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHPP--PLFDVSKMEERKLQ 786
+L F +P WV++ +L+ + EY+ V+ D + L L P + D +KM +RK Q
Sbjct: 1090 AL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQ 1145
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 332 bits (852), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 331/644 (51%), Gaps = 45/644 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
Y YR +L+ + Q++V++G+TGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 397 YTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVA 456
Query: 202 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 260
RV +E G YS+ F + + +MTD LL+ + + +L S +++D
Sbjct: 457 ARVAQEMGVKLGHEV--GYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVD 514
Query: 261 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 320
EAHER+ R L+++I SAT DA++ SDYF IF GR++PVE
Sbjct: 515 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVE 574
Query: 321 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF---- 376
+ Y + IH RE G IL F T Q E+E A E
Sbjct: 575 INYTSAPEADYMDAAIVTILT--------IHVREPLGDILVFFTGQEEIETAEEILKHRI 626
Query: 377 ----TALSAVAL-PLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 430
T + + + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 627 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 686
Query: 431 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQE 489
G K ++P +GM L ++ ISK+SA QRAGRAGRT PGKCYRLY+ +Y + +E N
Sbjct: 687 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 746
Query: 490 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 549
PE++R +L VL + +LG+ ++ +FDF+D P ++ ++ L L + N + ELT
Sbjct: 747 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGAL---NKLGELT 803
Query: 550 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQ-RSDC 608
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +D
Sbjct: 804 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR---PKDKQVHADN 860
Query: 609 HKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 667
++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 861 ARMNFHTGNVGDHIALLKVYSSWKE--TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLE 918
Query: 668 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 727
+ + D +++K I++ + A Y + + V +H
Sbjct: 919 RVEIDISSNLNELD---------SVRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 967
Query: 728 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 771
P+ L P WVV+ EL+ S EY+ V+ + L L P
Sbjct: 968 PNSGLSQVL--PRWVVYHELVLTSKEYMRQVTELKPEWLIELAP 1009
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 332 bits (851), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 331/644 (51%), Gaps = 45/644 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
Y YR +L+ + Q++V++G+TGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 407 YTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVA 466
Query: 202 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 260
RV +E G YS+ F + + +MTD LL+ + + +L S +++D
Sbjct: 467 ARVAQEMGVKLGHEV--GYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVD 524
Query: 261 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 320
EAHER+ R L+++I SAT DA++ SDYF IF GR++PVE
Sbjct: 525 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVE 584
Query: 321 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF---- 376
+ Y + IH RE G IL F T Q E+E A E
Sbjct: 585 INYTSAPEADYMDAAIVTILT--------IHVREPLGDILVFFTGQEEIETAEEILKHRI 636
Query: 377 ----TALSAVAL-PLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 430
T + + + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 431 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQE 489
G K ++P +GM L ++ ISK+SA QRAGRAGRT PGKCYRLY+ +Y + +E N
Sbjct: 697 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 756
Query: 490 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 549
PE++R +L VL + +LG+ ++ +FDF+D P ++ ++ L L + N + ELT
Sbjct: 757 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGAL---NKLGELT 813
Query: 550 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQ-RSDC 608
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +D
Sbjct: 814 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR---PKDKQVHADN 870
Query: 609 HKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 667
++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 871 ARMNFHTGNVGDHIALLKVYSSWKE--TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLE 928
Query: 668 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 727
+ + D +++K I++ + A Y + + V +H
Sbjct: 929 RVEIDISSNLNELD---------SVRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 977
Query: 728 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 771
P+ L P WVV+ EL+ S EY+ V+ + L L P
Sbjct: 978 PNSGLSQVL--PRWVVYHELVLTSKEYMRQVTELKPEWLIELAP 1019
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 329 bits (843), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 334/645 (51%), Gaps = 43/645 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
++ R ++L+ I Q++V++GETGSGK+TQL Q+L + G + + CTQPR++AA S+
Sbjct: 561 FSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVA 620
Query: 202 QRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDE 261
+RV EE GD I F ++ I +MTD LL+ + D +L +V+DE
Sbjct: 621 KRVSEEMETELGDK-IGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDE 679
Query: 262 AHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 321
AHERS RR ++I+ SAT +A++ S++F IF + GR FPV +
Sbjct: 680 AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNI 739
Query: 322 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWAC-------E 374
Y+ + + A IH G IL F+T Q E+E AC E
Sbjct: 740 LYSKTPC--------EDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERME 791
Query: 375 KFTALSA------VALPLHGKLSSEEQFHVFQS-FPGKRKVIFSTNLAETSLTIPGVKYV 427
+ + S+ + LP++ +L ++ Q +FQ G RK I +TN+AETSLT+ G+ YV
Sbjct: 792 QLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYV 851
Query: 428 IDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADY-QSMEL 486
ID+G K F+P GM+ L+V IS++++DQRAGRAGRT PG CYRLY+E+ Y M
Sbjct: 852 IDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLP 911
Query: 487 NQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVH 546
+ PEI+R +LG VL + +L + N+ DFDF+D P +I + ++ QL V+ NNV
Sbjct: 912 SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENI---LNSMYQLWVLGALNNVG 968
Query: 547 ELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRS 606
LT G +V+ ++P L K++L + + E + + S+++ S+F R ++ S
Sbjct: 969 GLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLS-VPSVFFRPKERAEE--S 1025
Query: 607 DCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXX 666
D + +F + D TLL+VY +W+ + + WC ++ + K +R+ +
Sbjct: 1026 DAAREKFFVPESDHLTLLNVYQQWKE--HDYRGDWCNDHYLQVKGLRKAREVRSQLLDIL 1083
Query: 667 XXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQL 726
WD ++K I S+ N A G + Y +TG L
Sbjct: 1084 KQLKIELRSCGPDWD---------IVRKAICSAYFHNSARLKGVGE--YVNCRTGMPCHL 1132
Query: 727 HPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 771
HPS +L P +VV+ EL+ + EY+ C ++ + L L P
Sbjct: 1133 HPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGP 1177
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 321 bits (822), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 327/644 (50%), Gaps = 45/644 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
Y YR +L + Q+++++GETGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 407 YTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVA 466
Query: 202 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 260
RV +E G G YS+ F + + +MTD LL+ + + +L S I++D
Sbjct: 467 ARVAQEMGGKLGHEV--GYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVD 524
Query: 261 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 320
EAHER+ R L+++I SAT DA++ SD+F IF GR++PV+
Sbjct: 525 EAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVD 584
Query: 321 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF---- 376
+ + + IH +E G +L FL Q E+E E
Sbjct: 585 ICFTTAPEADYMDAAITTVLT--------IHVKEPLGDVLVFLPGQEEIEAVEENLKHKI 636
Query: 377 ----TALSAVAL-PLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 430
T + + + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 431 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEAD-YQSMELNQE 489
G K ++P +GM L V+ ISK+SA QR GRAGRT PGKCYRLY+ + Y +E N
Sbjct: 697 GFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTV 756
Query: 490 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 549
PEI+R +L VL + +LG+ N+ +FDF+D P PS E I++L L + N + ELT
Sbjct: 757 PEIQRTNLASVVLSLKSLGIHNLLNFDFMDPP-PS--EALIKSLELLFALGALNQLGELT 813
Query: 550 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCH 609
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +
Sbjct: 814 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYR---PKDKQVHADN 870
Query: 610 KVQFCH--RDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 667
++ H GD L +Y W+ T +WC+EN I +SM+R D
Sbjct: 871 AMKNFHVGNVGDHIAFLKIYNSWKE--TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 928
Query: 668 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 727
+ + D +++K I++ + A Y + + V +H
Sbjct: 929 RVEIDVSSNANELD---------SIRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 977
Query: 728 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 771
P+ L P WVV+ +L+ S EY+ V+ + L + P
Sbjct: 978 PASGLSQVL--PRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAP 1019
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 318/646 (49%), Gaps = 47/646 (7%)
Query: 144 YRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLTQR 203
+ I+ + ++V+IGETGSGKSTQL Q L G I TQPR++AA S+ +R
Sbjct: 9 FEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSVARR 68
Query: 204 VQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEA 262
V +E G++ Y++ F +RI ++TD LL+ +S+ L S I++DEA
Sbjct: 69 VAQELDVPLGEDV--GYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEA 126
Query: 263 HERSXXXXXXXXXXXXXXGRRV-KLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 321
HERS R +V+I SAT D +++S++F C + V G+ +PVE+
Sbjct: 127 HERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEI 186
Query: 322 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF----- 376
Y+ ++A +IH RE EG IL F+T Q ++E +
Sbjct: 187 LYS--------KERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVR 238
Query: 377 -----TALSAVALPLHGKLSSEEQFHVFQSFPGK-RKVIFSTNLAETSLTIPGVKYVIDS 430
+ + A+ PLHG L E Q VF P R+ I STN+AETSLT+ GV YVIDS
Sbjct: 239 SLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDS 298
Query: 431 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQE- 489
G VK +++PSSGM L V ISK A+QRAGRAGRT PGKCYRLY A Y+ L+
Sbjct: 299 GYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATI 358
Query: 490 PEIRRVHLGVAVLRILALGVKNVQ--DFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHE 547
PEI+R L +VL + +L + ++ FDF+DAPS S+E A++ L +D I N +
Sbjct: 359 PEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAI-- 416
Query: 548 LTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSD 607
TR GR + L +EP L + ++ + + + + ++++ +++ +K+R
Sbjct: 417 -TRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKH 475
Query: 608 CHKVQFCHRD--GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXX 665
+ GD LL ++ W+ T WC EN + + M D
Sbjct: 476 DEDSNLPNGSGYGDHIQLLQIFESWDR--TNYDPVWCKENGMQVRGMVFVKDVRRQLCQI 533
Query: 666 XXXXXXXXTPSNWRWDPYKPSFHDT--NMKKVI----LSSLAENVATYSGCNQLGYEVAQ 719
D K S D ++K + + +AE + ++G L ++
Sbjct: 534 MQKISKDRLEVG--ADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQ--- 588
Query: 720 TGRCVQLHPSCSLLVFAE--RPGWVVFGELLSVSNEYLVCVSAFDF 763
+ VQ+HPS L + P +VV+ EL+S + ++ V A D
Sbjct: 589 -SQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDM 633
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 290 bits (741), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 314/640 (49%), Gaps = 53/640 (8%)
Query: 145 RRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGI------GADECIVCTQPRKIAAK 198
+ D L ++ Q ++L+GETGSGK+TQ+ QF+ D+ + G + CTQPR++AA
Sbjct: 71 KDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAM 130
Query: 199 SLTQRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 257
S+++RV +E G+ YS+ F + + ++TD LL+ M+D L I
Sbjct: 131 SVSRRVADEMDVSIGEEV--GYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVI 188
Query: 258 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 317
++DEAHER+ R L++++MSAT +A++ +YF + V GR
Sbjct: 189 ILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLH 248
Query: 318 PVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKFT 377
PVE+ Y R +IH E G IL FLT + E+E AC K
Sbjct: 249 PVEIFYT--------QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 378 ALSA---------VALPLHGKLSSEEQFHVF--------QSFPGKRKVIFSTNLAETSLT 420
+ +PL+ L Q +F + P RK++ STN+AETSLT
Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 421 IPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEAD 480
I G+ YVID G K ++P + L VS ISK+SA QR+GRAGRT PGKC+RLY+E
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 481 YQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVI 539
+ + ++ PEI R +L VL + LG+ ++ FDF+D P+P ++ A+ L L +
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
Query: 540 KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGN 599
N LT+ G + + ++P++ K+++ + N E ++++++++ + C V
Sbjct: 481 DDEGN---LTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN---CFVRP 534
Query: 600 EGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTY 659
++ +D K +F H DGD TLL+VY ++ WC+EN +N ++M+ +
Sbjct: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPNWCFENFVNNRAMKSADNVR 592
Query: 660 XXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 719
+++ Y N++K +L+ VA Y +
Sbjct: 593 QQLVRIMSRFNLKMCSTDFNSRDYY-----VNIRKAMLAGYFMQVAHLERTGH--YLTVK 645
Query: 720 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 759
+ V LHPS L +P WV++ E + + ++ V+
Sbjct: 646 DNQVVHLHPSNCL---DHKPEWVIYNEYVLTTRNFIRTVT 682
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 289 bits (740), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 316/641 (49%), Gaps = 55/641 (8%)
Query: 145 RRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADEC-------IVCTQPRKIAA 197
+ + L+ ++ Q ++L+GETGSGK+TQ+ QF+ D+ + A+ + CTQPR++AA
Sbjct: 67 KEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDA-VDAETSDKRRKWLVGCTQPRRVAA 125
Query: 198 KSLTQRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSC 256
S+++RV EE G+ YS+ F + + ++TD LL+ M+D L
Sbjct: 126 MSVSRRVAEEMDVTIGEEV--GYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKV 183
Query: 257 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 316
I++DEAHER+ R L++++MSAT +A++ DYF + V GR
Sbjct: 184 IILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRL 243
Query: 317 FPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF 376
PVE+ Y R +IH E G IL FLT + E+E AC K
Sbjct: 244 HPVEIFYT--------QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 295
Query: 377 TALSA---------VALPLHGKLSSEEQFHVF--------QSFPGKRKVIFSTNLAETSL 419
+PL+ L Q +F + P RK++ STN+AETSL
Sbjct: 296 NKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSL 355
Query: 420 TIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEA 479
TI G+ YVID G K ++P + L VS ISK+SA QR+GRAGRT PGKC+RLY+E
Sbjct: 356 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEK 415
Query: 480 DYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDV 538
+ + ++ PEI R +L VL + LG+ ++ FDF+D P+P ++ A+ L L
Sbjct: 416 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 475
Query: 539 IKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVG 598
+ + N LT+ G + + ++P++ K+++ + N E ++++++++ + C +
Sbjct: 476 LDDDGN---LTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPN---CFIR 529
Query: 599 NEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDT 658
++ +D K +F H +GD TLL+VY ++ WC+EN IN ++M+ +
Sbjct: 530 PREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQ--NNEDPNWCYENFINNRAMKSADNV 587
Query: 659 YXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVA 718
+++ Y N++K +L+ VA Y
Sbjct: 588 RQQLVRIMSRFNLKMCSTDFNSRDYY-----INIRKAMLAGYFMQVAHLERTGH--YLTV 640
Query: 719 QTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 759
+ + V LHPS L +P WV++ E + S ++ V+
Sbjct: 641 KDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT 678
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 288 bits (738), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 325/664 (48%), Gaps = 65/664 (9%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIG-ADECIVCTQPRKIAAKSL 200
Y YR +IL + +++GETGSGK+TQ+ Q+L ++G I CTQPR++A +++
Sbjct: 51 YKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAV 110
Query: 201 TQRVQEESSGCYGDNAIKCYSMFSSSHKFD--SRITFMTDHCLLQHCMSDKNLFGVSCIV 258
+ RV EE G+ Y++ H + + F+TD L++ M D L S I+
Sbjct: 111 SARVAEEMGVNLGEEV--GYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIM 168
Query: 259 IDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCC----------- 307
IDEAHERS RR +LR+II SAT +AK +S++F
Sbjct: 169 IDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTP 228
Query: 308 ------GIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILA 361
I V GR F V++ Y I++RE G +L
Sbjct: 229 GPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILL--------INEREPPGDVLV 280
Query: 362 FLTSQAEVEWACEKF---------TALSAVALPLHGKLSSEEQFHVFQSFP-GKRKVIFS 411
FLT Q ++E A + + + LPL+ LS EQ +F P GKRKVI S
Sbjct: 281 FLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILS 340
Query: 412 TNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGK 471
TN+AETSLT+ GV YVIDSG K ++P S + L V+ ISK+SA QR+GRAGR PGK
Sbjct: 341 TNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGK 400
Query: 472 CYRLYSEADYQSMELNQE--PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMA 529
CYRLY+E DY ++ E PE++R +L V+++ ALG+ N+ FD+ P+P S E
Sbjct: 401 CYRLYTE-DYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDW---PAPPSSEAM 456
Query: 530 IRNLIQLDVIKLNNNVHELTR-EGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMT 588
IR L L +++ ++ +LT G + +L ++P + K+IL + E I +A++++
Sbjct: 457 IRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLS 516
Query: 589 NASS-IFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSI 647
S I R G ++ D K++F +GD T L+VY + L +++ +WC++N +
Sbjct: 517 VQSVWIIAR----GVQKEQDEAKLRFAAAEGDHVTFLNVYKGF--LESKKPTQWCYKNFL 570
Query: 648 NAKSMRRCHDTYXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATY 707
N +SM++ + + + ++K + + N
Sbjct: 571 NYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEA---------VRKAVTAGFFANACRL 621
Query: 708 SGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLH 767
+ Y+ + V +HPS L F P WVV+ ++S +Y+ V + L
Sbjct: 622 EPHSNGVYKTIRGSEEVYIHPSSVL--FRVNPKWVVYQSIVSTERQYMRNVVTINPSWLT 679
Query: 768 GLHP 771
+ P
Sbjct: 680 EVAP 683
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 287 bits (735), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 215/700 (30%), Positives = 331/700 (47%), Gaps = 111/700 (15%)
Query: 146 RDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGAD-ECIVCTQPRKIAAKSLTQRV 204
+ ++ ++ I++++GETGSGK+TQL QFL ++G + + I TQPR+IAA ++ +RV
Sbjct: 48 KRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRV 107
Query: 205 QEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAH 263
EE G YS+ F + +R+ +MTD LL+ + D +L S I++DEAH
Sbjct: 108 AEECEVQLGQKV--GYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAH 165
Query: 264 ERSXXXXXXXXXXXXXX----------------------------------------GRR 283
+RS GR+
Sbjct: 166 DRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRK 225
Query: 284 VK-LRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXXX 342
+ L++IIMSA+ DA+ S+YF V+GR+FPV++ Y
Sbjct: 226 LSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIF-- 283
Query: 343 XXRMATEIHKREKEGTILAFLTSQAEVE----WACEKFTALSA-----VALPLHGKLSSE 393
+IH EK G IL FLT Q E+E E+ + + L + L SE
Sbjct: 284 ------QIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSE 337
Query: 394 EQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWI 452
+Q VF P G RKVI +TN+AETS+TIPG++YVID G VK +DPS GM L V
Sbjct: 338 QQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPA 397
Query: 453 SKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNV 512
SK+ QR+GRAGR PGK +RLY E +++ +E + +PEI+R +L +L++ ALG+ ++
Sbjct: 398 SKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDI 457
Query: 513 QDFDFVDAPSPSSIEMAIRNLIQLDVI----KLNNNVHELTREGRDLVKLGIEPRLGKLI 568
FDF+D PS +I A+ L L + KL N V G + +L +EP K +
Sbjct: 458 VGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPV------GYQMSRLPLEPVYSKAL 511
Query: 569 LGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYM 628
+ + N E + ++++ SIF + ++ R+ K F +GD T LSVY
Sbjct: 512 ILANQFNCLEEMLITVAVLS-VESIFYDPREKREEARTS--KNHFASVEGDHLTYLSVYR 568
Query: 629 EWEALPTERK------------NKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPS 676
E + +RK KWC EN +N++S++ D Y
Sbjct: 569 ESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIY----------------R 612
Query: 677 NWRWDPYKPSFHDTNMKKVILSS---LAENVATYSGCNQLG--YEVAQTGRCVQLHPSCS 731
R + F+ ++ +L+ LA + + QL Y ++G V +HP+
Sbjct: 613 QIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSV 672
Query: 732 LLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLHGLHP 771
L F +P V+F EL+ S +Y+ ++ D L L P
Sbjct: 673 L--FRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAP 710
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 237/438 (54%), Gaps = 29/438 (6%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLT 201
+ YR ++L+ I Q++V++GETGSGK+TQ+ Q+L ++G I CTQPR++AA S+
Sbjct: 218 HGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVA 277
Query: 202 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 260
RV +E G YS+ F + I +MTD LL+ + + L S I+ID
Sbjct: 278 SRVAQEVGVKLGHEV--GYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIID 335
Query: 261 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 320
EAHER+ R LR+II SAT +AK+ S+YF I+ + GR++PVE
Sbjct: 336 EAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVE 395
Query: 321 --VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEKF-- 376
R P R +IH+ E G IL FLT Q E+E
Sbjct: 396 KLFRKCPEP----------DYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKR 445
Query: 377 ------TALSAVAL-PLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVI 428
T S + + P++ L + Q VF+ P G RKV+ +TN+AETSLTI GVKYVI
Sbjct: 446 RMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVI 505
Query: 429 DSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQ 488
D G K + ++P +GM L V+ ISK+SA QRAGR+GRT PGKC+RLY+ D + +
Sbjct: 506 DPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNIKDLEPTTI-- 563
Query: 489 EPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHEL 548
PEI+R +L VL + +LG+++V +FDF+D P +++ A+ L L + + +
Sbjct: 564 -PEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITKG 622
Query: 549 TREGRDLVKLGIEP-RLG 565
TR D P RLG
Sbjct: 623 TRSSIDQRTSKFSPTRLG 640
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 221/492 (44%), Gaps = 59/492 (11%)
Query: 143 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLTQ 202
A +R I+ +I ++ +++GE G GKS+Q+ QFL ++ + I+CTQPR+ A ++ +
Sbjct: 30 AMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP---ILCTQPRRFAVVAVAK 86
Query: 203 RVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDK--NLFGVSCIVID 260
V + + G I + S S+I F T LL M DK N I++D
Sbjct: 87 MVAKSRNSDLG-GEIGYHIGHSKILTEGSKILFKTAGVLLDE-MLDKGLNALKYKVIILD 144
Query: 261 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 320
E HERS + LRV++MSATAD + DYF G RG + VE
Sbjct: 145 EVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELG----RGER--VE 198
Query: 321 VRYAPSDT-------------------GXXXXXXXXXXXXXXXRMATEI----------- 350
V PS G TEI
Sbjct: 199 VVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDL 258
Query: 351 ----HKREK--EGTILAFLTSQAEVEWA---CEKFTALSAVALPLHGKLSSEEQFHVFQS 401
H++E E +IL FL + +E E F A V + LH + +E+ +
Sbjct: 259 ILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHI-LHRSIDTEQALAAMKI 317
Query: 402 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 461
+RKVI +TN+AE+S+TIP V YVIDS +DPS + +++ W+S+S A+QR
Sbjct: 318 CRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRR 377
Query: 462 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 521
GR GRT G+ YRL A + +E ++ P I ++ L VL I + + D + + A
Sbjct: 378 GRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAK 437
Query: 522 S-----PSSIEMAIRNLIQLDVI-KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHN 575
+ P ++ A+R L+ + + K +E T GR L + L++ +
Sbjct: 438 AMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFDASILVVKFGEMG 497
Query: 576 LFREGIALASLM 587
+ R+GI L LM
Sbjct: 498 MLRQGILLGVLM 509
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 5/204 (2%)
Query: 368 EVEWACEKFTALSAVALPLHGKLSSEEQFHVFQSFPGK-RKVIFSTNLAETSLTIPGVKY 426
E E KF+ LPL+ LS Q VF+ + R V+ +TN+AETSLTIPG+KY
Sbjct: 634 EAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKY 693
Query: 427 VIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSM-E 485
V+D+G VK +D +GM +V WIS++SA QRAGRAGRT PG CYRLYS A + ++ E
Sbjct: 694 VVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFE 753
Query: 486 LNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNV 545
+ PEI +V + +L + ++ + V++F F P PS+I A R L L+ + N
Sbjct: 754 ESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGG- 812
Query: 546 HELTREGRDLVKLGIEPRLGKLIL 569
LT G+ + + PR +++L
Sbjct: 813 --LTPLGKAMSHYPMSPRHSRMLL 834
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 47/267 (17%)
Query: 146 RDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGADE------CIVCTQPRKIAAKS 199
++I+ I+ +++ G+TG GK+TQ+ QFL ++G G+ + I TQPR++A +
Sbjct: 248 QEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLA 307
Query: 200 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVI 259
+RV E G + + +S I FMTD LL+ +D L S I++
Sbjct: 308 TAKRVAFE-LGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRRYSVIIL 366
Query: 260 DEAHERSXXXXXXXXXXXXXXGRR-----------------------VKLRVIIMSATAD 296
DEAHERS R L++I+MSAT
Sbjct: 367 DEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMSATL- 425
Query: 297 AKQLSDYFYCCGIFG-------VRGRKFPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATE 349
++ D+ +F V R++PV + ++ +
Sbjct: 426 --RVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFS-------KKTEIVDYIGEAYKKVMS 476
Query: 350 IHKREKEGTILAFLTSQAEVEWACEKF 376
IHK+ +G IL F+T Q EV++ CEK
Sbjct: 477 IHKKLPQGGILVFVTGQREVDYLCEKL 503
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 157/315 (49%), Gaps = 16/315 (5%)
Query: 354 EKEGTILAFLTSQAEVEWACEK-----FTALSA--VALPLHGKLSSEEQFHVF-QSFPGK 405
E G IL FLT E+ EK F S+ + LPLHG + + Q +F + P K
Sbjct: 501 EGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNK 560
Query: 406 RKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAG 465
RK++ +TN+AE+S+TI V YV+D G K++ +D + + L SWISK+SA QR GRAG
Sbjct: 561 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAG 620
Query: 466 RTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSS 525
R + G CYRLY + Y + Q PEI R L L I +L V ++ F A P
Sbjct: 621 RVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSF-LAKALQPPD 679
Query: 526 IEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALA 584
+A+ N I+ L I N+V ELT GR L L ++P +GK++L + +A
Sbjct: 680 -ALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIA 738
Query: 585 SLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALPTERKNKWC 642
+ + S + K+ +D K F D LL Y + +A + +C
Sbjct: 739 AALAYRSPFVLPLNR---KEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFC 795
Query: 643 WENSINAKSMRRCHD 657
W+N ++ ++R D
Sbjct: 796 WQNFLSPVTLRMMED 810
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGI----GADECIVCTQPRKIAA 197
+ + + L + Q++V+ GETG GK+TQL QF+ + I GAD I+CTQPR+I+A
Sbjct: 231 FKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISA 290
Query: 198 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFD-SRITFMTDHCLLQHCMSDKNLFGVSC 256
S+ R+ E G++ Y + S + D +R+ F T LL+ + D NL VS
Sbjct: 291 ISVASRISAERGESIGESV--GYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSH 348
Query: 257 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 316
+++DE HER RR LR+I+MSAT +A S YF + G
Sbjct: 349 LLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFT 408
Query: 317 FPV 319
FPV
Sbjct: 409 FPV 411
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 158/322 (49%), Gaps = 31/322 (9%)
Query: 350 IHKREKEGTILAFLTSQAEVEWACEKFTALS-------AVALPLHGKLSSEEQFHVFQS- 401
I + E G IL FLT ++ EK + L HG + + EQ +F+
Sbjct: 492 ICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEP 551
Query: 402 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 461
G RK++ +TN+AETS+TI V +VID G K++ +D + L SWISK SA QR
Sbjct: 552 ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRR 611
Query: 462 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 521
GRAGR PG+CY LY + Y + Q PEI R L L+I +L + ++ +F
Sbjct: 612 GRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 671
Query: 522 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGKL-----ILGCRKHN 575
SP +A++ I L +I + +LT GR L KL +EP+LGK+ ILGC
Sbjct: 672 SPEL--LAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGC---- 725
Query: 576 LFREGIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEA 632
L ++T A+ + R + + K ++ K QF D L+ Y W+
Sbjct: 726 -------LDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKK 778
Query: 633 LPTERK-NKWCWENSINAKSMR 653
E +CW+N ++ +S+R
Sbjct: 779 AEEESAVYDYCWKNFLSIQSLR 800
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGI----GADECIVCTQPRKIAA 197
+ R +L I Q++V+ GETG GK+TQ+ QF+ +S I GA I+CTQPR+I+A
Sbjct: 223 FKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISA 282
Query: 198 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 257
S+++RV E G+ ++ D+R+ F T LL+ + D+NL GV+ +
Sbjct: 283 MSVSERVAYERGEQLGE-SVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHV 341
Query: 258 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 317
++DE HER RR +L++I+MSAT DA+ S YF G+ + G +
Sbjct: 342 IVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTY 401
Query: 318 PVEVRY 323
PV +
Sbjct: 402 PVRSHF 407
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 158/313 (50%), Gaps = 25/313 (7%)
Query: 345 RMATEIHKREKEGTILAFLTSQAEVEWACEK-----FTALSA--VALPLHGKLSSEEQFH 397
++ +I K+G IL FL E+ EK F A SA + L LH ++ +EEQ
Sbjct: 564 KLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKK 623
Query: 398 VFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSS 456
VF P G RK++ +TN+AE+++TI V YVIDSG +K+ +DP + ++ L+ SW+SK++
Sbjct: 624 VFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKAN 683
Query: 457 ADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVK-NVQDF 515
A QRAGRAGR + G CY LYS+ S+ + PE+ R+ + L++ L NV DF
Sbjct: 684 AKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDF 743
Query: 516 --DFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRK 573
+D P SIE A LI L I ELT G+ +L + PR+ K+I
Sbjct: 744 LQKLMDPPVAQSIENA---LIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAIL 800
Query: 574 HNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEAL 633
N + LA + F + GD++++ K + GD L+ ++
Sbjct: 801 VNCLDPALILA-CAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQ-- 857
Query: 634 PTERKNKWCWENS 646
CW+N+
Sbjct: 858 --------CWKNA 862
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 143 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGA--DEC-IVCTQPRKIAAKS 199
++R I+ + Q++++ GETG GK+TQ+ Q+L D + + C I+CTQPR+I+A S
Sbjct: 221 SFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAIS 280
Query: 200 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMS---DKNLFGVSC 256
++ R+ E G + S +S + F T+ LL+ + + ++ ++
Sbjct: 281 VSDRISWERGETIG-RTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITH 339
Query: 257 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 316
I++DE HER LR+I+MSAT DA++ S+YF C + V G
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFT 399
Query: 317 FPV 319
+PV
Sbjct: 400 YPV 402
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 161/324 (49%), Gaps = 28/324 (8%)
Query: 355 KEGTILAFLTSQAEVEW------ACEKFTALSA-VALPLHGKLSSEEQFHVFQSFP-GKR 406
+EG IL FL +E+ A +F S LPLH ++S EQ VF P G R
Sbjct: 881 EEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIR 940
Query: 407 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 466
KVI +TN+AETS+TI V YVIDSG K++R++P ++ + W+SK++A QR GRAGR
Sbjct: 941 KVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGR 1000
Query: 467 TEPGKCYRLYSEADYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDF--DFVDAPSP 523
+PG C+ LY+ ++ M Q PE+ RV L L I LG+ ++ F ++ PS
Sbjct: 1001 VKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSE 1060
Query: 524 SSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIAL 583
S+I AI L ++ ++ + ELT G L KL ++ +GK++L +++
Sbjct: 1061 SAINSAILLLHKVGALEGD---EELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSI 1117
Query: 584 ASLMTNASSIFCRVGNEGDKQR----------SDCHKVQFCHRDGDLFTLLSVYMEWEAL 633
A+ ++ S F +E + R + R D ++ Y +W +
Sbjct: 1118 AAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRI 1177
Query: 634 PTERKNK----WCWENSINAKSMR 653
E+ K +C +N+ MR
Sbjct: 1178 LHEQGFKAAESFCESKFLNSSVMR 1201
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 145 RRDILRQIHYQQIMVLIGETGSGKSTQLVQF----LADSGIGADECIVCTQPRKIAAKSL 200
++DIL+++ + ++V+ GETGSGK+TQ+ QF + DSG G I+CTQPR I ++
Sbjct: 603 KKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAI---TV 659
Query: 201 TQRVQEE--SSGCYGDNAIKCYSMFSSSHKFD-SRITFMTDHCLLQHCMSDKNLFGVSCI 257
QRV +E DN++ Y + + + D +R+ F T LL+ + D L V+ I
Sbjct: 660 AQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHI 719
Query: 258 VIDEAHERSXXXXXXXXXXXXXXGRRV------KLRVIIMSATADAKQLSDYFYCCGIFG 311
++DE HERS ++ KL+VI+MSAT DA Q S YF C I
Sbjct: 720 IVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIIT 779
Query: 312 VRGRKFPVEVRY 323
+GR PV +
Sbjct: 780 AQGRTHPVTTYF 791
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 209/471 (44%), Gaps = 70/471 (14%)
Query: 355 KEGTILAFLTSQAEVEWACEKFTA-------LSAVALPLHGKLSSEEQFHVFQSFP-GKR 406
+EG IL FL AE+ + A + LPLH ++S EQ VF P G R
Sbjct: 914 EEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLR 973
Query: 407 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 466
KVI +TN+AETS+TI V YVIDSG K++R++P ++ + WIS+++A QR GRAGR
Sbjct: 974 KVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGR 1033
Query: 467 TEPGKCYRLYSEADYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDF--DFVDAPSP 523
+PG C+ LY+ ++ M Q PE+ R+ L L+I LG+ +++ F ++ PS
Sbjct: 1034 VKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSE 1093
Query: 524 SSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIAL 583
++ AI L ++ ++ + ELT G L KL ++ +GK++L +++
Sbjct: 1094 GAMTSAISLLHEVGAVEGD---EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSI 1150
Query: 584 ASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDG-------------DLFTLLSVYMEW 630
A+ ++ S + + +KQ D K+ +G D ++ Y +W
Sbjct: 1151 AAFLSYKSPF---IYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKW 1207
Query: 631 EALPTER----KNKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPSN--------- 677
+ ER ++C +++ MR D P
Sbjct: 1208 VKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKE 1267
Query: 678 ----WRWDPYKP----SFHDTNMKKVILSSLAENVA------TYSGCNQLGYEVAQTG-- 721
W DP +P S +K ++ + L N+A T + N L + QT
Sbjct: 1268 NLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSY 1327
Query: 722 -------RCVQLHPSCSLLVF-AERPGWVVFGELLSVSNEYL---VCVSAF 761
R V +HPS F A + ++VF E + + YL VS F
Sbjct: 1328 SAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPF 1378
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 13/189 (6%)
Query: 148 ILRQIHYQQIMVLIGETGSGKSTQLVQF----LADSGIGADECIVCTQPRKIAAKSLTQR 203
IL+ + + ++V+ GETGSGK+TQ+ QF + DSG G I+CTQPR+IAA S+ QR
Sbjct: 623 ILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQR 682
Query: 204 VQEE---SSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 260
V +E SS D+ + S+ +R+ F T LL+ D+ L V+ I++D
Sbjct: 683 VADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVD 742
Query: 261 EAHERSXXXXXXXXXXXXXXGRRV------KLRVIIMSATADAKQLSDYFYCCGIFGVRG 314
E HERS ++ KL+VI+MSAT DA S YF C + +G
Sbjct: 743 EVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQG 802
Query: 315 RKFPVEVRY 323
R PV +
Sbjct: 803 RTHPVTTHF 811
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 24/319 (7%)
Query: 350 IHKREKEGTILAFLTSQAEVEWACEKFTALSAVALP-------LHGKLSSEEQFHVFQSF 402
I K E+ G +L F+T ++ + A S + P HG ++S EQ +F
Sbjct: 572 IVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRP 631
Query: 403 P-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 461
P G RK++ +TN+AETS+TI V YVID G K++ +D + L SWISK++A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 462 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 521
GRAGR PG+CY LY Y++ Q+PE+ R L L+I +LG+ ++ +F
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 522 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 579
P + ++++N ++ L +I ++ LT G++L L +EP+LGK LILG +F
Sbjct: 752 PPEA--LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGA----IFN- 804
Query: 580 GIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALP 634
L +MT + + R + K ++ + +F RD D TL+ Y W +A
Sbjct: 805 --CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAER 862
Query: 635 TERKNKWCWENSINAKSMR 653
T +CW+N +++++++
Sbjct: 863 THSGYDYCWKNFLSSQTLK 881
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGI----GADECIVCTQPRKIAA 197
Y + +L+ I Q++V+ GETG GK+TQL Q++ +S I GA I+CTQPR+I+A
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 198 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 257
S+++RV E G+ ++ D+R+ F T LL+ + D++L GV+ +
Sbjct: 362 ISVSERVAAERGEQIGE-SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHV 420
Query: 258 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 317
V+DE HER RR L++I+MSAT +A+ S YF + G +
Sbjct: 421 VVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTY 480
Query: 318 PVEVRY 323
PV +
Sbjct: 481 PVRAHF 486
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 24/319 (7%)
Query: 350 IHKREKEGTILAFLTSQAEVEWACEKFTALSAVALP-------LHGKLSSEEQFHVFQSF 402
I K E+ G +L F+T ++ + A S + P HG ++S EQ +F
Sbjct: 572 IVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRP 631
Query: 403 P-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 461
P G RK++ +TN+AETS+TI V YVID G K++ +D + L SWISK++A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 462 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 521
GRAGR PG+CY LY Y++ Q+PE+ R L L+I +LG+ ++ +F
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 522 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 579
P + ++++N ++ L +I ++ LT G++L L +EP+LGK LILG +F
Sbjct: 752 PPEA--LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGA----IFN- 804
Query: 580 GIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALP 634
L +MT + + R + K ++ + +F RD D TL+ Y W +A
Sbjct: 805 --CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAER 862
Query: 635 TERKNKWCWENSINAKSMR 653
T +CW+N +++++++
Sbjct: 863 THSGYDYCWKNFLSSQTLK 881
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 142 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGI----GADECIVCTQPRKIAA 197
Y + +L+ I Q++V+ GETG GK+TQL Q++ +S I GA I+CTQPR+I+A
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 198 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 257
S+++RV E G+ ++ D+R+ F T LL+ + D++L GV+ +
Sbjct: 362 ISVSERVAAERGEQIGE-SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHV 420
Query: 258 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 317
V+DE HER RR L++I+MSAT +A+ S YF + G +
Sbjct: 421 VVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTY 480
Query: 318 PVEVRY 323
PV +
Sbjct: 481 PVRAHF 486
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 167/319 (52%), Gaps = 18/319 (5%)
Query: 350 IHKREKEGTILAFLTSQAEVEWACEKFTALSAVALP-------LHGKLSSEEQFHVFQSF 402
I ++E+ G +L FLT ++ ++ A + P HG +++ EQ +F+
Sbjct: 533 ICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERA 592
Query: 403 PGK-RKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 461
P RK++ +TN+AE S+TI V +V+D G K++ +D + L SWIS++SA QR
Sbjct: 593 PPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 652
Query: 462 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 521
GRAGR PG+CY LY + Y + Q PE+ R L L+I +L V+++ +F
Sbjct: 653 GRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQ 712
Query: 522 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 579
+P S +A++N I L +I + LT G+ L L ++P+LGK LI+G +FR
Sbjct: 713 APES--LAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGA----IFRC 766
Query: 580 GIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEWEALPTE-R 637
+ ++++ S + + K + K++F +D D L+ + W+ E
Sbjct: 767 FDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGS 826
Query: 638 KNKWCWENSINAKSMRRCH 656
++CW N ++A++++ H
Sbjct: 827 AYEFCWRNFLSAQTLQAIH 845
Score = 100 bits (249), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 148 ILRQIHYQQIMVLIGETGSGKSTQLVQFL----ADSGIGADECIVCTQPRKIAAKSLTQR 203
+L+ I Q++V+ GETG GK+TQL Q++ +SG GA I+CTQPR+I+A ++++R
Sbjct: 269 LLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSER 328
Query: 204 VQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAH 263
V E G+ + ++ + F T LL+ +SD+NL GV+ + +DE H
Sbjct: 329 VSAERGEPLGE-TVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIH 387
Query: 264 ERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRY 323
ER RR LR+++MSAT +A+ S+Y+ + G PV+ +
Sbjct: 388 ERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHF 447
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 16/242 (6%)
Query: 355 KEGTILAFLTSQAEVEWACEK-----FTALSAV--ALPLHGKLSSEEQFHVF-QSFPGKR 406
++G IL FL ++ ++ F A SA + LH + + EQ VF + PG R
Sbjct: 550 EDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCR 609
Query: 407 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 466
K++ +TN+AE+++TI V YVIDSG +K+ +DP + ++ L+ SW+SK++A QR GRAGR
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Query: 467 TEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDF----VDAPS 522
+PG CY LYS SM + PEI+R+ + L++ L N + DF +D P
Sbjct: 670 CQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQKLLDPPV 728
Query: 523 PSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIA 582
SI A+ L + + ELT G L + P + K++ N +
Sbjct: 729 DQSIANALSILQDIGALTPQ---EELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALT 785
Query: 583 LA 584
LA
Sbjct: 786 LA 787
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Query: 143 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIGA--DEC-IVCTQPRKIAAKS 199
+++ I + Q++++ GETG GK+TQ+ Q+L D + + C IVCTQPR+I+A S
Sbjct: 191 SFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMS 250
Query: 200 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVS---C 256
+++R+ E G+N I S S + F T+ LL+ + ++ VS
Sbjct: 251 VSERISCERGESIGEN-IGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITH 309
Query: 257 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 316
I++DE HER LR+I+MSAT DA++ S YF C + V G
Sbjct: 310 IIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFT 369
Query: 317 FPVEVRY 323
+PV Y
Sbjct: 370 YPVRTLY 376
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 495 VHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTREGRD 554
+L VL + L VKN+ FD +D+P+P ++ A+ +L L + + N LT+ G
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCN---LTKTGEM 58
Query: 555 LVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQR-SDCHKVQF 613
+ + ++P++ K+++ + N E ++++++++ + C + G+ Q+ +D K F
Sbjct: 59 MSEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPN---CFIRPRGEAQKAADEAKSSF 115
Query: 614 CHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXX 673
H DGD TLL+++ + L + WC IN ++M+
Sbjct: 116 AHIDGDHLTLLNLFHAF--LQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL 173
Query: 674 TPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLL 733
++ Y N++K +L+ VA + + V LHPS L
Sbjct: 174 CSPDFNSRDYY-----VNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL- 227
Query: 734 VFAERPGWVVFGELLSVSNEYLVCVS 759
+P WVV+ E + S ++ V+
Sbjct: 228 --DHKPEWVVYNEYVFTSRNFIRTVT 251
>AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger) family
protein | chr5:24252226-24254710 FORWARD LENGTH=655
Length = 655
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 1395 CPICLCEV--EDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDL 1452
C IC ++ E + ++ C H FC C+ + E + + G+ P C +GC +++ D
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLH-GMAPKC-PHDGCKSELVI-DA 357
Query: 1453 RSFLLNDKLEELFRASLGAFVVASGGTYR-FCPSPDCPSIYRVADPDTGGEPFV------ 1505
LL KL +L++ L + T R +CP P C ++ + +
Sbjct: 358 CGKLLTPKLSKLWQQRLQENAIPV--TERVYCPYPRCSALMSKTKISESAKSLLSLYPKS 415
Query: 1506 ----CGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACG 1558
C C C C + +H LSC YK+ +P D+ LK K + C C
Sbjct: 416 GVRRCVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLANNK-MWRQCGKCQ 474
Query: 1559 YVIEKVDGCNHVECKCGKHVCWVC 1582
++IE GCNH+ C+CG C+ C
Sbjct: 475 HMIELSQGCNHITCRCGHEFCYNC 498
>AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11130119-11131514 FORWARD LENGTH=384
Length = 384
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 1406 YQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELF 1465
+ ++ CGH+FC C+ E ++ + I C C + + +L K++E++
Sbjct: 167 FYIDQCGHMFCSECVKRHIEVSLLQGSL--ITCPSYRCKSKLTYGSCVN-ILTPKVKEMW 223
Query: 1466 RASLGAFVVASGGTYRFCPSPDCPSIYRVADPDT-GGEPFVCGACYSETCTRCHLEYHPY 1524
+G + +CP+P C ++ V + D G C C C +C + +H
Sbjct: 224 IQRMGEDSIPVTDRV-YCPNPTCSALMSVTELDQLTGSKRCCVKCGESFCIKCKVPWHDN 282
Query: 1525 LSCERYKEF---KQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWV 1581
LSC+RYK+ + D L E +E + CS C ++IE GC V C+CG C+
Sbjct: 283 LSCKRYKKLHSNRTTNDKQLNEL-ANQESWRQCSKCKHMIELTQGCVRVICRCGHEFCYG 341
Query: 1582 C 1582
C
Sbjct: 342 C 342
>AT3G53690.1 | Symbols: | RING/U-box superfamily protein |
chr3:19898997-19900044 REVERSE LENGTH=320
Length = 320
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 1404 DGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEE 1463
+ +++ GC H +C C+ + + +++ I I C GC + R L + +
Sbjct: 126 ESFRIGGCSHFYCNDCVSKYIAAKLQD-NILSIECPVSGCSGRLEPDQCRQILPKEVFDR 184
Query: 1464 LFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSETCTRCHLEYHP 1523
A A V+ S Y CP DC ++ + + + + C C+ C C ++HP
Sbjct: 185 WGDALCEAVVMRSKKFY--CPYKDCSALVFLEESEVKMKDSECPHCHRMVCVECGTQWHP 242
Query: 1524 YLSCERYKEFKQDP----DLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVC 1579
++CE +++ + D+ L K K + K C +C + IEK GC +++C+CG C
Sbjct: 243 EMTCEEFQKLAANERGRDDILLATMAKQK-KWKRCPSCKFYIEKSQGCLYMKCRCGLAFC 301
Query: 1580 WVC 1582
+ C
Sbjct: 302 YNC 304
>AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16729989-16731511 REVERSE LENGTH=408
Length = 408
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 1390 DTGPSCPICL---CEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDP 1446
D +C IC E E + + CGH FC C+ E + G+ P C + C
Sbjct: 168 DHDKTCSICSDDNFEPELMFSVALCGHEFCVECVKRHIEVRLLAGGV-PRCLHYQ-CESK 225
Query: 1447 ILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFV- 1505
+ L + + LL KL+ ++ + + +CP+P C S+ V V
Sbjct: 226 LTLANCAN-LLTSKLKAMWELRIEEESIPVEERV-YCPNPRCSSLMSVTKLSNSTREDVT 283
Query: 1506 ---CGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGY 1559
C C C C L +H LSC YK +P D+ LK K + C C
Sbjct: 284 MRSCVKCGEPFCINCKLPWHSNLSCNDYKSLGPNPTADDIKLKALANQK-MWRQCENCKN 342
Query: 1560 VIEKVDGCNHVECKCGKHVCWVC 1582
VIE +GC H+ C+CG C+ C
Sbjct: 343 VIELSEGCMHITCRCGHQFCYKC 365
>AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily protein
| chr2:13511579-13513550 FORWARD LENGTH=543
Length = 543
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 15/185 (8%)
Query: 1410 GCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPI---LLTDLRSFLLNDKLEELF 1465
CGH +C+ C + I++ G + C + C + ++ D+ +N+K
Sbjct: 144 SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDMIEDVTETKVNEKYSRYI 203
Query: 1466 RASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSETCTRCHLEYHPYL 1525
S V G ++CPSP C ++ C C C C + H +
Sbjct: 204 LRSY----VEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSC-LCSYRFCWNCSEDAHSPV 258
Query: 1526 SCERYKE--FKQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECK--CGKHVCWV 1581
C+ + FK + K W K C C IEK DGCNH+ C CG CW+
Sbjct: 259 DCDTVSKWIFKNQDESENKNWMLANS--KPCPECKRPIEKNDGCNHMTCSAPCGHEFCWI 316
Query: 1582 CLEIF 1586
CL+ +
Sbjct: 317 CLKAY 321
>AT5G37560.1 | Symbols: | RING/U-box superfamily protein |
chr5:14921986-14923790 FORWARD LENGTH=444
Length = 444
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 1385 LVKRHDTGP-SCPICLCEVEDGYQL--EGCGHLFCRLCLVEQCESAIKNQGIFPICCSQE 1441
LVK P +C IC + + + L + C H C C+ +Q + +++ GI P C ++
Sbjct: 170 LVKATQEKPLTCSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRS-GIVPPC-LED 227
Query: 1442 GCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGG 1501
GC + L S +L KL E+++ + ++ +CP C + +
Sbjct: 228 GCKSELTLESC-SMVLTPKLIEMWKRKMEEDLIPDAEKI-YCPYRSCSMLMSKTELSREA 285
Query: 1502 EPF---VCGACYSETCTRCHLEYHPYLSCERYKEFKQD---PDLSLKEWCKGKEQVKSCS 1555
E C C C C + +H LSC YK + D+ LK + + CS
Sbjct: 286 EQSNVRACIKCSELFCIDCKVPWHSDLSCADYKRIHSERLVNDMMLKVL-ANDQMWRQCS 344
Query: 1556 ACGYVIEKVDGCNHVECKCGKHVCWVC 1582
C ++IE +GCNH+ C+CG C+ C
Sbjct: 345 ECKHMIELTEGCNHITCRCGYEFCYRC 371
>AT3G14250.1 | Symbols: | RING/U-box superfamily protein |
chr3:4745963-4746958 REVERSE LENGTH=303
Length = 303
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 23/241 (9%)
Query: 1369 PRVEETILEIARSSNDLVKRHD-TGPS---CPICLCEVEDGYQLEG---CGHLFCRLCLV 1421
P+V ++ + + ++ ++ PS C IC+ E G C H +C C V
Sbjct: 65 PQVHRNLVTLVKQEPEIKAENEPMEPSRRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTV 124
Query: 1422 EQCESAIKNQGIFPICCSQEGCG---DPILLTDLRSFLLNDKLEELFRASLGAFVVASGG 1478
+ IK + I C C +P DL + D+ E++ SL ++S
Sbjct: 125 RYVATKIK-ENASRIKCPDVECTRLIEPYTCRDLIPKDVFDRWEKILCESL----ISSWD 179
Query: 1479 TYRFCPSPDCPSIY-RVADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCERYKEF---- 1533
+ +CP DC ++ + D C +C+ C +C + +H + C+ ++ F
Sbjct: 180 KF-YCPFKDCSAMMVNNENGDANVTQTECRSCHRLFCVQCKVTWHAGIGCDEFQRFGNTK 238
Query: 1534 --KQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVCLEIFMSSDE 1591
D D +L +Q + C +C + ++KV+GC H++C+CG C+ C ++ SS
Sbjct: 239 KKSSDEDDALLIQMAKNKQWRRCPSCKFYVDKVEGCQHIKCRCGYQFCYGCGSVWSSSHA 298
Query: 1592 C 1592
C
Sbjct: 299 C 299
>AT2G25370.1 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=603
Length = 603
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 24/263 (9%)
Query: 1328 KQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEETILEIARSSNDLVK 1387
K+ + + ++ G+ +K+ +D L R+ ++K I R+S D+
Sbjct: 248 KKKIDHLVEEVQGILEKMACIDAVLVARN---------DVKFAFRLAREAIGRNSVDV-- 296
Query: 1388 RHDTGPSCPICLCE--VEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGD 1445
+ G +C I E VE + E C H C C+ + + +++ G P C + GC
Sbjct: 297 NAEQGETCGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRS-GTEPTCL-EYGCKF 354
Query: 1446 PILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGE--- 1502
+ L S +L KL E+++ + + + +CP P+C + + + +
Sbjct: 355 KLTLERC-SKVLTLKLIEMWKQKMKEDSIPAAERI-YCPYPNCSMLMSKTELSSEADLSN 412
Query: 1503 PFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGY 1559
C C C C + H LS + YK+ DP DL LK K + C C +
Sbjct: 413 VRTCVKCCGLFCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDK-MWRQCVKCRH 471
Query: 1560 VIEKVDGCNHVECKCGKHVCWVC 1582
+IE GCNH+ C+CG C+ C
Sbjct: 472 MIELSHGCNHMTCRCGYEFCYEC 494
>AT2G25370.2 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=546
Length = 546
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 15/213 (7%)
Query: 1378 IARSSNDLVKRHDTGPSCPICLCE--VEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFP 1435
I R+S D+ + G +C I E VE + E C H C C+ + + +++ G P
Sbjct: 232 IGRNSVDV--NAEQGETCGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRS-GTEP 288
Query: 1436 ICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVA 1495
C + GC + L S +L KL E+++ + + + +CP P+C +
Sbjct: 289 TCL-EYGCKFKLTLERC-SKVLTLKLIEMWKQKMKEDSIPAAERI-YCPYPNCSMLMSKT 345
Query: 1496 DPDTGGE---PFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKE 1549
+ + + C C C C + H LS + YK+ DP DL LK K
Sbjct: 346 ELSSEADLSNVRTCVKCCGLFCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDK- 404
Query: 1550 QVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
+ C C ++IE GCNH+ C+CG C+ C
Sbjct: 405 MWRQCVKCRHMIELSHGCNHMTCRCGYEFCYEC 437
>AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:15646460-15647566 FORWARD LENGTH=346
Length = 346
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 1394 SCPIC---LCEVEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLT 1450
+C IC + E E + + CGH FC C+ E + G+ P C + C + LT
Sbjct: 154 TCSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEGGV-PRCLDYQ-CESKLTLT 211
Query: 1451 DLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFV----- 1505
+ LL KL+ +++ + ++ +CP+P C + + T E V
Sbjct: 212 SCGN-LLTPKLKAIWKQRIEEELILVAERV-YCPNPRCSGLMSKTELSTSTEEDVSTRTC 269
Query: 1506 CGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGYVIE 1562
C C C C + +H LSC+ YK +P D+ LK +++ C+ C ++I
Sbjct: 270 CVKCGEPFCINCKVPWHSNLSCDDYKRLGPNPTKNDIKLKVL-ANQQKWSQCAKCQHMIA 328
Query: 1563 KVDGCNHVECK 1573
+++GCN + C+
Sbjct: 329 RIEGCNVIICR 339
>AT2G25360.1 | Symbols: | RING/U-box superfamily protein |
chr2:10804249-10805761 FORWARD LENGTH=373
Length = 373
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 1376 LEIARSSNDLVKRHDTGPS-CPICLCEVEDG---YQLEGCGHLFCRLCLVEQCESAIKNQ 1431
++AR + +V R D C IC E E + E C H C C+ + E + +
Sbjct: 72 FKLAREA--IVSRDDVKAEICSICFEETEGERMFFTTEKCVHRHCFPCVKQYVEVKLLS- 128
Query: 1432 GIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSI 1491
G P C +GC + L S +L +L E+++ + + + +CP P+C +
Sbjct: 129 GTVPTC-LDDGCKFKLTLESC-SKVLTLELIEMWKQKMKEDSIPAAERI-YCPYPNCSML 185
Query: 1492 YRVADPDTGGE---PFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWC 1545
+ + + C C C C + H LSC YK+ DP +L LK
Sbjct: 186 MSKTELSSESDLSNDRSCVKCCGLFCIDCKVPSHSDLSCAEYKKLHHDPLVDELKLKSLA 245
Query: 1546 KGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
K K + + C C ++IE CNH+ C+CG C+ C
Sbjct: 246 KDK-KWRQCKMCRHMIELSHACNHMTCRCGYQFCYQC 281
>AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily
protein | chr2:13508493-13510390 FORWARD LENGTH=514
Length = 514
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 11/192 (5%)
Query: 1410 GCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRAS 1468
CGH +C+ C + I++ G + C + C + + ++ +R
Sbjct: 137 SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYF 196
Query: 1469 LGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCE 1528
L ++V G ++CPSP C + + G C C C C + H + CE
Sbjct: 197 LRSYV-EDGKKMKWCPSPGCECAVEFGE--SSGYDVAC-LCSYRFCWNCSEDAHSPVDCE 252
Query: 1529 RYKE--FKQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVEC--KCGKHVCWVCLE 1584
+ FK + K W K C C IEK GCNH+ C CG CW+C +
Sbjct: 253 TVSKWIFKNQDESENKNWILANS--KPCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGK 310
Query: 1585 IFMSSDECYNHL 1596
+ C N++
Sbjct: 311 SYSDHYACNNYV 322
>AT3G27720.1 | Symbols: ARI4, ATARI4 | IBR domain containing protein |
chr3:10271876-10273621 FORWARD LENGTH=493
Length = 493
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 1456 LLNDKLEELFRASLGAFVVASGGTYRFCPS-PDCPSIYRVADPDTGGEPFVCGACYSETC 1514
L++ +L E F L V ++CPS P C + R D + C +C + C
Sbjct: 143 LVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVEC-SCGLQFC 201
Query: 1515 TRCHLEYHPYLSCERYKEFKQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKC 1574
C E H SC +K +K+ + + K C C I+K DGCNH+ CKC
Sbjct: 202 FSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNTKLCPKCSKPIQKRDGCNHMTCKC 261
Query: 1575 GKHVCWVC 1582
G+H CW+C
Sbjct: 262 GQHFCWLC 269
>AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily protein
| chr3:10269304-10270917 FORWARD LENGTH=537
Length = 537
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 72/175 (41%), Gaps = 7/175 (4%)
Query: 1411 CGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLG 1470
CGH FC C + I I C C I D+ L++ +L + + L
Sbjct: 139 CGHRFCNDCWIGHFTVKINEGESKRILCMAHECK-AICDEDVVRKLVSPELADRYDRFLI 197
Query: 1471 AFVVASGGTYRFCPS-PDCPSIYRVADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCER 1529
V ++CPS P C S R + C +C + C C E H SC
Sbjct: 198 ESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGC-SCGLQFCFSCLSESHSPCSCLM 256
Query: 1530 YKEFKQ--DPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
+K +K+ + + W K C C I+K DGCN + CKCG+H CW+C
Sbjct: 257 WKLWKKKCEDESETVNWITV--NTKLCPKCSKPIQKRDGCNLMTCKCGQHFCWLC 309
>AT2G19610.2 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485863 FORWARD LENGTH=418
Length = 418
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 1394 SCPICLCEV--EDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTD 1451
SCP+C V D ++++GC H C C+ + S +G IC C + ++ D
Sbjct: 202 SCPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAIC-PYPDCENDLVPED 260
Query: 1452 LRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVAD--------PDTGGEP 1503
R+F D + + + + Y CP+P C + D P E
Sbjct: 261 CRAFADADAITLMIQRKKEKAIPVKDRVY--CPNPSCSFLMSDLDLIRHISKNPRHSEEA 318
Query: 1504 FVCGACYSETCTRCHLEYHPYLSCERYKEFKQ--DPDLSLKEWCKGKEQVKSCSACGYVI 1561
C C C +CH+ +H +C+ +K+ + D ++ E + K CS C ++
Sbjct: 319 RKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQGWKKCSQCQSIV 378
Query: 1562 EKVDGCNHVECKCGKH-VCWVC 1582
+ GC + C+ KH C+ C
Sbjct: 379 QHGGGCQQMTCRHCKHEFCYTC 400
>AT4G19670.2 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 42/341 (12%)
Query: 1271 TGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQL--------VIHLRGKDL 1322
+G ++ +R +L + K+D ++ + + L+L +G ++ V+ + +L
Sbjct: 79 SGIGVVLERSG-DLELIQVQKKLDFYVEESVANYLALMDGLEVALQNNLSSVVAVTDSEL 137
Query: 1323 PPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEETILEIARSS 1382
+ + + + P L L+++V NLN ++ + + + + + I S+
Sbjct: 138 LYNQITREEQLEIPLLVALRERVLEKTSNLNGFVLKLAPFCDLDEALSLAQVAVGIVSSN 197
Query: 1383 NDLVKRHDTGPSCPICLCEVEDGYQLE-GCGHLFCRLCLVEQCESAIKNQGIFPICCSQE 1441
D K + +C IC + + L C H FC C+ E +K + PI C Q
Sbjct: 198 LDGDKPIE---NCSICCEDRQSEMMLSLKCTHKFCSHCMKTYVEGKVKTSEV-PIRCPQV 253
Query: 1442 GCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGG 1501
C + + +SFL F++ A V + +CP P+C + DP
Sbjct: 254 QCKHYLSAAECKSFLPVTT----FKSFEEANVCSKNNGKIYCPYPNCSFLL---DPQECL 306
Query: 1502 EPFV----------------CGACYSETCTRCHLEYHPYLSCERYKEFKQDP----DLSL 1541
C C C C + +H +SCE ++ D D++L
Sbjct: 307 SSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITL 366
Query: 1542 KEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
+ K + + C C +IE GCNH+ C+CG C+ C
Sbjct: 367 HRLARYK-RWRRCQQCRIMIELAQGCNHMTCRCGHEFCYSC 406
>AT4G19670.1 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 42/341 (12%)
Query: 1271 TGTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLHEGRQL--------VIHLRGKDL 1322
+G ++ +R +L + K+D ++ + + L+L +G ++ V+ + +L
Sbjct: 79 SGIGVVLERSG-DLELIQVQKKLDFYVEESVANYLALMDGLEVALQNNLSSVVAVTDSEL 137
Query: 1323 PPDLMKQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEETILEIARSS 1382
+ + + + P L L+++V NLN ++ + + + + + I S+
Sbjct: 138 LYNQITREEQLEIPLLVALRERVLEKTSNLNGFVLKLAPFCDLDEALSLAQVAVGIVSSN 197
Query: 1383 NDLVKRHDTGPSCPICLCEVEDGYQLE-GCGHLFCRLCLVEQCESAIKNQGIFPICCSQE 1441
D K + +C IC + + L C H FC C+ E +K + PI C Q
Sbjct: 198 LDGDKPIE---NCSICCEDRQSEMMLSLKCTHKFCSHCMKTYVEGKVKTSEV-PIRCPQV 253
Query: 1442 GCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGG 1501
C + + +SFL F++ A V + +CP P+C + DP
Sbjct: 254 QCKHYLSAAECKSFLPVTT----FKSFEEANVCSKNNGKIYCPYPNCSFLL---DPQECL 306
Query: 1502 EPFV----------------CGACYSETCTRCHLEYHPYLSCERYKEFKQDP----DLSL 1541
C C C C + +H +SCE ++ D D++L
Sbjct: 307 SSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITL 366
Query: 1542 KEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
+ K + + C C +IE GCNH+ C+CG C+ C
Sbjct: 367 HRLARYK-RWRRCQQCRIMIELAQGCNHMTCRCGHEFCYSC 406
>AT3G45470.1 | Symbols: | IBR domain containing protein |
chr3:16680505-16681261 REVERSE LENGTH=222
Length = 222
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 1392 GPSCPICLCEVEDG--YQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILL 1449
G +C ICL E + + ++ C H C C+ + E ++N G P C E C + L
Sbjct: 3 GETCVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRN-GTVPTCLDYE-CKLKLSL 60
Query: 1450 TDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPF--VCG 1507
+ +L K+ EL++ + + +CP +C ++ + + C
Sbjct: 61 ENCFK-VLKPKVIELWKHMMKEESIPLAKRI-YCPYINCSTLMSKTEISRSNKSNDRACI 118
Query: 1508 ACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGYVIEKV 1564
C C C + +H LSC YK+ DP DL+LK ++ + C C ++IE
Sbjct: 119 KCSGLVCIDCKVPWHSDLSCAEYKKLHPDPVLDDLTLKLL-ANDQKWRQCVKCRHLIELN 177
Query: 1565 DGCNHVECKCGKHVCWVC 1582
GCNH+ C+CG C+ C
Sbjct: 178 QGCNHMTCRCGYQFCYKC 195
>AT2G19610.1 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485723 FORWARD LENGTH=397
Length = 397
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Query: 1394 SCPICLCEV--EDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTD 1451
SCP+C V D ++++GC H C C+ + S +G IC C + ++ D
Sbjct: 202 SCPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAIC-PYPDCENDLVPED 260
Query: 1452 LRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVAD--------PDTGGEP 1503
R+F D + + + + Y CP+P C + D P E
Sbjct: 261 CRAFADADAITLMIQRKKEKAIPVKDRVY--CPNPSCSFLMSDLDLIRHISKNPRHSEEA 318
Query: 1504 FVCGACYSETCTRCHLEYHPYLSCERYKEFKQ--DPDLSLKEWCKGKEQVKSCSACGYVI 1561
C C C +CH+ +H +C+ +K+ + D ++ E + K CS C ++
Sbjct: 319 RKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQGWKKCSQCQSIV 378
Query: 1562 EKVDGCNHVECK 1573
+ GC + C+
Sbjct: 379 QHGGGCQQMTCR 390
>AT2G21420.1 | Symbols: | IBR domain containing protein |
chr2:9169713-9171746 FORWARD LENGTH=468
Length = 468
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 29/227 (12%)
Query: 1367 LKPRVEETILEIARSSNDLVKRHDTGPSCPICL--CEVEDGYQLEGCGHLFCRLCLVEQC 1424
L PR + IL I G +C IC + + + E C H C C+
Sbjct: 168 LVPRADVIILAIEAIG---------GETCCICRENTDADRMFFTENCFHRQCFSCVNRHV 218
Query: 1425 ESAIKNQGIFPIC----CSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTY 1480
+ + GI P C C+ E L + S +L L E ++ + +V +
Sbjct: 219 QRMLLC-GISPTCLHFPCNSE------LTFESCSKVLTPNLIEFWKRKIEEDLVPAADKI 271
Query: 1481 RFCPSPDCPSIYR---VADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDP 1537
+CP C + ++ C C C C + H LSC YK+ DP
Sbjct: 272 -YCPYRRCSMLMSKTALSRETDQSNVRACIKCCRLFCIDCKVPSHAGLSCVDYKKLNPDP 330
Query: 1538 --DLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWVC 1582
D+ LK K++ + C C ++E +GCNH+ C+CG C+VC
Sbjct: 331 LYDVKLKSL-ANKKKWRQCVQCSNLVELFEGCNHITCRCGFEFCYVC 376
>AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517142 FORWARD LENGTH=443
Length = 443
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 11/189 (5%)
Query: 1410 GCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRAS 1468
CGH +C+ C + I++ G + C + C + + ++ +R
Sbjct: 155 SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYF 214
Query: 1469 LGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPF-VCGACYSETCTRCHLEYHPYLSC 1527
L ++V G ++CPSP C Y V G + V C + C C + H + C
Sbjct: 215 LRSYV-EDGKKMKWCPSPGCE--YAVEFGVNGSSSYDVSCLCSYKFCWNCCEDAHSPVDC 271
Query: 1528 ERYKEF--KQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECK--CGKHVCWVCL 1583
E ++ K + W K K C C IEK GCNH+ C C + CW CL
Sbjct: 272 ETVSKWLLKNKDESENMNWILAK--TKPCPKCKRPIEKNTGCNHMSCSAPCRHYFCWACL 329
Query: 1584 EIFMSSDEC 1592
+ C
Sbjct: 330 QPLSDHKAC 338
>AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16683263-16684592 REVERSE LENGTH=382
Length = 382
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 1403 EDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLE 1462
E+ + + C H FC C+ E E ++ N+G P C +GC + L LL K
Sbjct: 167 ENMFSADLCSHYFCVECMKEHIEVSL-NEGGLPRC-PHDGCTSNLTLRSC-DHLLTPKQR 223
Query: 1463 ELFRASLGAFVVASGGTYRFCPSPDCPSIYRVAD----PDTGGEPFVCGACYSETCTRCH 1518
E++ + + + CP+P C ++ + + G C C C C
Sbjct: 224 EMWEKRIKEESIPVCDRFH-CPNPRCWALMSKTELTESTEEDGVRRCCYKCRKHFCINCK 282
Query: 1519 LEYHPYLSCERYKEFKQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHV 1578
+ +H LSC+ +K ++P ++ W + C +C + I+ + V C+CG
Sbjct: 283 VPWHSNLSCKEHKSSGREPITTV--W-------RQCRSCLHKIKLSEERMPVTCRCGYKF 333
Query: 1579 CWVCLEIFMSSDECYNHLRTI 1599
C+ C + C +HL+ +
Sbjct: 334 CYACGAQWKLGGCCSHHLQEV 354
>AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11127134-11128476 FORWARD LENGTH=398
Length = 398
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 1394 SCPICLCE---VEDGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLT 1450
+C ICL + + + ++ GH+ C C+ E + + I C C LLT
Sbjct: 158 TCNICLNDDINADQMFSVDKSGHMCCSECVKRHIEVRLLEGSL--ITCPHYRCNS--LLT 213
Query: 1451 DLR-SFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPD--TGGEPFVCG 1507
+R LL KL +++ ++ +CP+P C ++ + G C
Sbjct: 214 SVRCGNLLTPKLNKMWEQKTKDELIPVMDRV-YCPNPRCSTLMSETELSGLNIGVRRCCV 272
Query: 1508 ACYSETCTRCHLEYHPYLSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGYVIEKV 1564
C C +C + +H LSC+ YK +P D L++ ++ + CS C ++IE
Sbjct: 273 KCGEPFCVKCKVSWHNNLSCDEYKTLHPNPTENDGRLRDL-ANEKSWRQCSKCKHMIELS 331
Query: 1565 DGCNHVECKCGKHVCWVC 1582
GC V C+CG C+ C
Sbjct: 332 SGCISVVCRCGHTFCYQC 349
>AT2G16090.1 | Symbols: ARI2, ATARI2 | RING/U-box superfamily protein
| chr2:6987367-6989822 REVERSE LENGTH=593
Length = 593
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 76/193 (39%), Gaps = 16/193 (8%)
Query: 1402 VED--GYQLE--GCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCG---DPILLTDLRS 1454
VED GYQL CGH FC C I I C C D ++ L S
Sbjct: 128 VEDVPGYQLTRMDCGHSFCNNCWTGHFTVKINEGQSKRIICMAHKCNAICDEDVVRALVS 187
Query: 1455 FLLNDKLEELFRASLGAFVVASGGTYRFCPS-PDCPSIYRVADPDTGGEPFVCGACYSET 1513
D E+ R L +++ ++CPS P C + RV D + CG +
Sbjct: 188 KSQPDLAEKFDRFLLESYI-EDNKMVKWCPSTPHCGNAIRVEDDELCEVECSCGLQF--- 243
Query: 1514 CTRCHLEYHPYLSCERYKEFKQD--PDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVE 1571
C C + H SC ++ +++ + W K C C +EK GCN V
Sbjct: 244 CFSCSSQAHSPCSCVMWELWRKKCFDESETVNWITV--HTKPCPKCHKPVEKNGGCNLVT 301
Query: 1572 CKCGKHVCWVCLE 1584
C C + CW+C E
Sbjct: 302 CLCRQSFCWLCGE 314
>AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein |
chr1:1779631-1784166 FORWARD LENGTH=594
Length = 594
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 1394 SCPICLCEVEDGYQLE-----GCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPI 1447
+C IC D Y LE CGH FC C + I + G + C C I
Sbjct: 173 TCGICF----DSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAI 228
Query: 1448 LLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPF-VC 1506
+ + E+ +R L ++V + ++CP+P C D G E + V
Sbjct: 229 GRDMIDKLASKEDKEKYYRYFLRSYVEVNR-EMKWCPAPGCE---HAIDFAGGTESYDVS 284
Query: 1507 GACYSETCTRCHLEYHPYLSCERYKEF--KQDPDLSLKEWCKGKEQVKSCSACGYVIEKV 1564
C C C E H + C+ ++ K + W K C C IEK
Sbjct: 285 CLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS--KPCPKCKRPIEKN 342
Query: 1565 DGCNHVECK--CGKHVCWVCLEIFMSSDE 1591
GC H+ C C CW+CL + E
Sbjct: 343 HGCMHMTCTPPCKFEFCWLCLNAWTEHGE 371
>AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily protein
| chr1:1779631-1784166 FORWARD LENGTH=552
Length = 552
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 1394 SCPICLCEVEDGYQLE-----GCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPI 1447
+C IC D Y LE CGH FC C + I + G + C C I
Sbjct: 131 TCGICF----DSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAI 186
Query: 1448 LLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPF-VC 1506
+ + E+ +R L ++V + ++CP+P C A G E + V
Sbjct: 187 GRDMIDKLASKEDKEKYYRYFLRSYVEVNR-EMKWCPAPGCEHAIDFA---GGTESYDVS 242
Query: 1507 GACYSETCTRCHLEYHPYLSCERYKEF--KQDPDLSLKEWCKGKEQVKSCSACGYVIEKV 1564
C C C E H + C+ ++ K + W K C C IEK
Sbjct: 243 CLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS--KPCPKCKRPIEKN 300
Query: 1565 DGCNHVECK--CGKHVCWVCLEIFMSSDE 1591
GC H+ C C CW+CL + E
Sbjct: 301 HGCMHMTCTPPCKFEFCWLCLNAWTEHGE 329
>AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing protein |
chr1:24301165-24306159 REVERSE LENGTH=567
Length = 567
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 75/203 (36%), Gaps = 11/203 (5%)
Query: 1395 CPICL-CEVEDGYQLEGCGHLFCRLCLVEQCESAIKN-QGIFPICCSQEGCGDPILLTDL 1452
C IC + D CGH FC C +AI + G + C C + D+
Sbjct: 128 CGICFETFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVG-QDM 186
Query: 1453 RSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSE 1512
+ L DK ++ + + V ++CP+P C +G C CYS
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFV-VGSGNYDVNCRCCYS- 244
Query: 1513 TCTRCHLEYHPYLSCERYKEF--KQDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHV 1570
C C E H + C+ ++ K + W K C C IEK GC H+
Sbjct: 245 FCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANS--KPCPKCKRPIEKNQGCMHI 302
Query: 1571 ECK--CGKHVCWVCLEIFMSSDE 1591
C C CW+CL + E
Sbjct: 303 TCTPPCKFEFCWLCLGAWTEHGE 325
>AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily protein
| chr4:16434547-16437037 FORWARD LENGTH=597
Length = 597
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 78/197 (39%), Gaps = 15/197 (7%)
Query: 1394 SCPICLCEVE-DGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDL 1452
SC +C+ ++ D CGH FC C E I I C C + I D+
Sbjct: 122 SCDVCMEDLPGDHMTRMDCGHCFCNNCWTEHFTVQINEGQSKRIRCMAHQC-NAICDEDI 180
Query: 1453 RSFLLNDKLEEL---FRASLGAFVVASGGTYRFCPS-PDCPSIYRVADPDTGGEPFVCGA 1508
L++ K +L F L + ++CPS P C + R D CG
Sbjct: 181 VRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWCPSTPHCGNAIRAEDDKLCEVECSCGL 240
Query: 1509 CYSETCTRCHLEYHPYLSC---ERYKEFKQDPDLSLKEWCKGKEQVKSCSACGYVIEKVD 1565
+ C C + H SC E +++ +D ++ W K C C +EK
Sbjct: 241 ---QFCFSCLCQAHSPCSCLMWELWRKKCRDESETIN-WITV--HTKLCPKCYKPVEKNG 294
Query: 1566 GCNHVECKCGKHVCWVC 1582
GCN V C CG+ CW+C
Sbjct: 295 GCNLVRCICGQCFCWLC 311
>AT3G45460.1 | Symbols: | IBR domain containing protein |
chr3:16678680-16680043 REVERSE LENGTH=389
Length = 389
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 1438 CSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIY---RV 1494
C +GC + L S LL KLEE++ + + + CP+P C ++ +
Sbjct: 214 CPHDGCKSILSLKSC-SHLLTPKLEEMWEHRIKEEFIPVCDRFH-CPNPRCWALMSKTEL 271
Query: 1495 ADPDTGGEPFVCGACYSETCTRCHLEYHPYLSCERYKEFKQDPDLSLKEWCKGKEQVKSC 1554
+ G C C C C + +H LSC+ YK ++P K + C
Sbjct: 272 VESTEDGVRRCCFKCRKAFCINCKVLWHSDLSCKEYKTLGRNP----------KTISRQC 321
Query: 1555 SACGYVIEKVDGCNHVECKCGKHVCWVC 1582
C ++I+ +V C+CG C+ C
Sbjct: 322 KKCQHMIKLSHKTINVYCRCGYSFCYTC 349
>AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16706312-16707649 REVERSE LENGTH=348
Length = 348
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 25/241 (10%)
Query: 1359 IFLHGNK---ELKPRVEETILEIARSSNDLVKRHDT-GPSCPICLCEVEDGYQL---EGC 1411
IF+ G + K E + EI+ S N + T +C ICL + + Q+ C
Sbjct: 60 IFVEGKRISYAYKLARETIVSEISISVNPPRQPKATRKTTCKICLDDDINENQMFCVGKC 119
Query: 1412 GHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGA 1471
H FC C+ E + + C C + + LL K+ E+++ +
Sbjct: 120 RHRFCSDCMRRHIEVRLLEGSVMR--CPHYRCKTTLKFGGCIN-LLTPKIREMWQQRIKE 176
Query: 1472 FVVASGGTYRFCPSPDCPSIYRVADPDTGGEP-------FVCGACYSETCTRCHLEYHPY 1524
++ G +CP+ C ++ + + F CG + C +C + +H
Sbjct: 177 DLIPVTGRI-YCPNSRCSALMSETELSISTKEDEVRRCCFKCGQIF---CIKCKVSWHSN 232
Query: 1525 LSCERYKEFKQDP---DLSLKEWCKGKEQVKSCSACGYVIEKVDGCNHVECKCGKHVCWV 1581
LSC YK+ P D +K +++ + C C ++IE GC V+C+CG C+
Sbjct: 233 LSCNDYKKLNPYPTENDGKIKAL-ANQKRWRQCGKCQHMIELSKGCVQVKCRCGHKFCYR 291
Query: 1582 C 1582
C
Sbjct: 292 C 292
>AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 |
chr1:11663462-11666037 REVERSE LENGTH=688
Length = 688
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 140/391 (35%), Gaps = 88/391 (22%)
Query: 1272 GTYILFDRHNQNLRIFGSPDKIDLAQQKLIQSLLSLH-----EGRQLVIHLRGKDLPPDL 1326
G +FDR+N ++R F ++ + I + L+L E + + + LPP +
Sbjct: 202 GNMFIFDRYN-DMRYFQVHVNVEATSEYTISTKLNLQADSSKESEDFLYSFKAQHLPPIV 260
Query: 1327 MKQV----------------VKNFGPD--------LHGLKQKVPG-------VDLNLNTR 1355
+K + V+ PD L L + PG D N+
Sbjct: 261 LKCLLPKAYPSHLPPYFLISVQWMNPDKISSLCSKLDSLWSEQPGQEVLYQWTDWLQNSS 320
Query: 1356 SQQIFLHGNKELKP---------------RVEETILEIARSSNDLVKRHDTG----PSCP 1396
+ L P R ++ + RS +D KRHD+ C
Sbjct: 321 ISHLGFDNEIVLGPYGVTCSRDKRAVSGSRSPDSDIPYIRSYDD-EKRHDSFLQSLHECC 379
Query: 1397 ICLCEVE--DGYQLEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRS 1454
IC E D +L C H FC C+ + + + + C CG+ + L+
Sbjct: 380 ICFSESAGIDFVKLP-CQHFFCLKCMKTYTDIHVTEGTVNKLKCPDSKCGETVPPGILKR 438
Query: 1455 FLLNDKLEELFRASLGAFVVASGGTYRFCPSPDCPSIYRVADPDTGGEPFVCGACYSETC 1514
LL D+ E + + + S +CP + P I + + +C CY C
Sbjct: 439 -LLGDEAYERWETLMLQKTLESMTDVAYCPRCETPCI------EDEEQLALCFKCYFSFC 491
Query: 1515 TRCHLEYH-------PYLSCERYKEFKQDPDLSLKEWCKGKEQV-------------KSC 1554
T C + H P L + +E + L ++ K KE + K C
Sbjct: 492 TLCKEKRHVGVACMSPELRLQILQERQDSSRLGEEQRRKEKEMINEIMSVKVIMKSAKQC 551
Query: 1555 SACGYVIEKVDGCNHVEC-KCGKHVCWVCLE 1584
+C I + GCN + C CG++ C+ C E
Sbjct: 552 PSCKIAISRTGGCNKMVCNNCGQYFCYRCNE 582