Miyakogusa Predicted Gene

Lj0g3v0270689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0270689.1 Non Chatacterized Hit- tr|I1MHB3|I1MHB3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7449
PE=,32.95,5e-18,seg,NULL,CUFF.17885.1
         (527 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G42550.1 | Symbols: PMI1 | plastid movement impaired1 | chr1:...   393   e-109
AT5G20610.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   110   3e-24
AT5G26160.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    96   7e-20

>AT1G42550.1 | Symbols: PMI1 | plastid movement impaired1 |
           chr1:15977131-15979734 FORWARD LENGTH=843
          Length = 843

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/456 (51%), Positives = 306/456 (67%), Gaps = 49/456 (10%)

Query: 76  HLARLTELDAISKQIKALQSMMGEDNRSIKAAEDTESQRLDSDEENVTREFLHMLEDLEA 135
           H+ RLTELD+I+KQIKAL+SMM ++  S     +TESQRLD +E+ VT+EFL +LED E 
Sbjct: 430 HIMRLTELDSIAKQIKALESMMKDE--SDGGDGETESQRLDEEEQTVTKEFLQLLEDEET 487

Query: 136 RGYKFNESEIPPLQLEGHEQEQSSVDGEMESKVYLPDLGKGLGCVIQTKDGGYLASMNPL 195
              KF + ++   +L   E    SVD E E+  YL DLGKG+GCV+QT+DGGYL SMNP 
Sbjct: 488 EKLKFYQHKMDISELRSGE----SVDDESEN--YLSDLGKGIGCVVQTRDGGYLVSMNPF 541

Query: 196 DNAVARNDTPKLAMQMSKPYVLTTSHESPNGLELFQKLASIGLDELSTQIFSLMPIDELI 255
           D  V R DTPKL MQ+SK  V+        G ELF ++A  G +EL ++I SLM IDEL+
Sbjct: 542 DTVVMRKDTPKLVMQISKQIVVLPEAGPATGFELFHRMAGSG-EELESKISSLMAIDELM 600

Query: 256 GKTAEQVAFEGIASAIIQGRNKEGASSSAARIVSALKGMANAMSSGRQERISTGLWNVDE 315
           GKT EQVAFEGIASAIIQGRNKE A++SAAR V+A+K MANAMSSGR+ERI TG+WNV+E
Sbjct: 601 GKTGEQVAFEGIASAIIQGRNKERANTSAARTVAAVKTMANAMSSGRRERIMTGIWNVEE 660

Query: 316 EPLT-AEKILAFTMQKIEFMAVEALKIQTDMAEEEAPFDVSALSNTKEENKDSNDLLSSA 374
            PLT AE++LA ++QK+E M VE LKIQ DM ++EAPF+VSA    K       + L S 
Sbjct: 661 NPLTSAEEVLAVSLQKLEEMVVEGLKIQADMVDDEAPFEVSAAKGQK-------NPLEST 713

Query: 375 VSLEDWIRDQSYNSDTDEPSSITLIFVVQLRDPIRGFEAVGGPVMVQVHATSVDTKGDDY 434
           + LE+W ++            +T++  VQLRDP R +EAVGG V+V V A   + KG   
Sbjct: 714 IPLEEWQKEHRTQ------QKLTVLATVQLRDPTRRYEAVGGTVVVAVQAEEEEEKG--- 764

Query: 435 YQDDEEKRFKVMSLHVGGFKVRSGTTKKNIAWETEKQRLTAMQWLIEHGLG-----KAGK 489
                    KV SLH+GG        KK+ A   EK+RLTA QWL+EHG+G     K+  
Sbjct: 765 --------LKVGSLHIGG-------VKKDAA---EKRRLTAAQWLVEHGMGKKGKKKSNI 806

Query: 490 RGKHALVKGQDLLWSISSRIMADMWLKTMRNPDIKL 525
           + K    + +++LWS+SSR+MADMWLK++RNPD+KL
Sbjct: 807 KKKEKEEEEEEMLWSLSSRVMADMWLKSIRNPDVKL 842


>AT5G20610.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins
           in 180 species: Archae - 6; Bacteria - 105; Metazoa -
           264; Fungi - 89; Plants - 167; Viruses - 5; Other
           Eukaryotes - 282 (source: NCBI BLink). |
           chr5:6969184-6972794 FORWARD LENGTH=1164
          Length = 1164

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 113/193 (58%), Gaps = 8/193 (4%)

Query: 170 LPDLGKGLGCVIQTKDGGYLASMNPLDNAVARNDTP--KLAMQMSKPYVLTTSHESPNGL 227
           LP LG GLG V+QTK+GG+L SMNPL   + RN      L MQ+S P V+     S   +
Sbjct: 701 LPPLGDGLGPVVQTKNGGFLRSMNPL---LFRNSKAGGSLIMQVSTPVVVPAEMGS-GIM 756

Query: 228 ELFQKLASIGLDELSTQIFSLMPIDELIGKTAEQVAFEGIASAIIQGRN--KEGASSSAA 285
           E+ QKLA+ G+++LS Q   +MP+D++ GKT E+V +E   +  I  R+   E  S  A+
Sbjct: 757 EILQKLATAGIEKLSMQANKVMPLDDITGKTMEEVLWETSPTIDIGDRDHVSERESGDAS 816

Query: 286 RIVSALKGMANAMSSGRQERISTGLWNVDEEPLTAEKILAFTMQKIEFMAVEALKIQTDM 345
             V   +   +  +  ++   S+G  N D E ++ E +    M +IE +++E L+IQ+ M
Sbjct: 817 GFVRGGERRTSFAAKPKKFGSSSGNNNFDSEYVSLEDLAPLAMDQIEALSLEGLRIQSGM 876

Query: 346 AEEEAPFDVSALS 358
           ++E+AP D++A S
Sbjct: 877 SDEDAPSDITAQS 889



 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 47/177 (26%)

Query: 394  SSITLIFVVQLRDPIRGFEAVGGPV--MVQVHATSVDTKGDDYY-------QDDEEK--- 441
            ++ T+  +VQLRDP+R +E VG P+  ++QV    V  K   Y         D+EE+   
Sbjct: 992  NTFTVALMVQLRDPLRNYEPVGAPMLSLIQVERLFVPPKPKIYSTVSELKKTDEEEEADA 1051

Query: 442  ----------------RFKVMSLHVGGFKVRSGTTKKNIAWETEKQRL-TAMQWLIEHGL 484
                            ++K+  +H+ G K  S T KK     T++Q++ +  +WL+ +G+
Sbjct: 1052 SDAKKEEKPMEEQGIPQYKITEVHLTGMK--SETDKKPWGITTQQQQVQSGSRWLMANGM 1109

Query: 485  GKAGK-----RGKHALVKGQDLLWSISSRIMADMWLKT---------MRNPDIKLVK 527
            GK        + K    K  D LWS+S       W +          +RNP++ + K
Sbjct: 1110 GKGNNKLPLMKPKLGSAKPGDKLWSVSGS--GSKWKELGKMGKSNTHIRNPNVIMPK 1164


>AT5G26160.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins
           in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28;
           Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes
           - 21 (source: NCBI BLink). | chr5:9143269-9146312
           FORWARD LENGTH=976
          Length = 976

 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 173/373 (46%), Gaps = 53/373 (14%)

Query: 170 LPDLGKGLGCVIQTKDGGYLASMNPLDNAVARNDTPKLAMQMSKPYVLTTSHESPNGLEL 229
           LP LG  +G  + TK GG + SMN L    ++ +  +L MQ+S P VL +   S + LE+
Sbjct: 588 LP-LGDNIGPSVWTKGGGCIRSMNHLLFRESK-EASQLIMQVSVPVVLVSELGS-DILEI 644

Query: 230 FQKLASIGLDELSTQIFSLMPIDELIGKTAEQVAFEGIASAIIQGRNKEGASSSAARIVS 289
            Q  A+ G++ L +++ +L+P+++++GKT  +V    +     +   ++ +  S   +V 
Sbjct: 645 LQIFAASGIEGLCSEVNALIPLEDIMGKTIHEV----VDVTKFKRTGQDCSDKSKGVVVQ 700

Query: 290 ALKGMANAMSSGRQERISTGLWNVDEEPLTAEKILAFTMQKIEFMAVEALKIQTDMAEEE 349
              G  +  SS  +   S    NV   PL  E + +  + +I  +++E LKIQ  M++++
Sbjct: 701 KPPGQLHLCSSNEEFGSSMCPSNV---PL--EDVTSLAIDEIYILSIEGLKIQCSMSDQD 755

Query: 350 APFDVSALSNTKEENKDSNDLLSSAVSLEDWIR-DQSY--NSDTDEPSS---------IT 397
            P   S ++    +  D+ +L+  +++L++W+R DQ    N D D  S+         +T
Sbjct: 756 PP---SGIAPKPMDQSDALELIRFSLTLDEWLRLDQGMLENKDQDLASNGKGHTLRNKLT 812

Query: 398 LIFVVQLRDPIRGFEAVGGPVMVQVHA-TSVDTKGDDYYQDDEEKR-----------FKV 445
           L   V LRDP    E +G  ++  +    S+D+         +E R           +++
Sbjct: 813 LALQVLLRDPSLNNEPIGASMLALIQVERSLDSPNSSLCSLAQEGRNKESFGYDTQLWRI 872

Query: 446 MSLHVGGFKVRSGTTKKNIAWETEKQRLTAMQWLIEHGLGKAGK-----------RGKHA 494
             + + G K+  G       W T+ Q+ +  +WL+ +G  K  K               A
Sbjct: 873 TEIGLAGLKIEPGADH---PWCTKSQQQSGSRWLLANGTDKTIKCQASESKVIIVSNVQA 929

Query: 495 LVKGQDLLWSISS 507
             K  D LWSI S
Sbjct: 930 TRKRLDTLWSIIS 942