Miyakogusa Predicted Gene

Lj0g3v0270259.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0270259.2 Non Chatacterized Hit- tr|I1KVW6|I1KVW6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.26,0,seg,NULL;
PUTATIVE UNCHARACTERIZED PROTEIN,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATASE,NULL; no descri,CUFF.17969.2
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence ph...   871   0.0  
AT4G18810.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   112   1e-24
AT4G18810.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   111   1e-24
AT4G31530.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    53   6e-07
AT4G31530.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    53   6e-07
AT4G35250.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    52   8e-07
AT2G37660.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    51   2e-06
AT5G02240.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    50   3e-06
AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold super...    49   7e-06

>AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence
           phenotype 173 | chr1:5723161-5726248 FORWARD LENGTH=598
          Length = 598

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/501 (81%), Positives = 457/501 (91%)

Query: 90  SLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISSTIRADDREALDALLVREGPMCEFAI 149
           +L LDDVNPVGLGRRSRQ+FDEVWRKFSGLGQ+S T R D++E LD+LL+REGPMCEFA+
Sbjct: 98  TLKLDDVNPVGLGRRSRQIFDEVWRKFSGLGQMSRTTRPDEQETLDSLLIREGPMCEFAV 157

Query: 150 PGAQSTVVLVVGATSRIGRIVVRKLMLRGYSVKALVRRADQEVIDLLPRSVEVIVGDVGD 209
           PGAQ+  VLVVGATSRIGRIVVRKLMLRGY+VKALVR+ D+EV+ +LPRSV+++VGDVG+
Sbjct: 158 PGAQNVTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKQDEEVMSMLPRSVDIVVGDVGE 217

Query: 210 PDTVKAAVEGCNKIIYCATARSTITGDLFRVDYRGVYNMSKAFQDHNNKLAQLRAGKSSK 269
           P T+K+AVE C+KIIYCATARSTIT DL RVD+ GVYN++KAFQD+NN+LAQLRAGKSSK
Sbjct: 218 PSTLKSAVESCSKIIYCATARSTITADLTRVDHLGVYNLTKAFQDYNNRLAQLRAGKSSK 277

Query: 270 SKLLITKFKSESSLDGWEVRQGSYFQDVVATKYDGGMDAKFEFTESGEAVFSGYVFNRGG 329
           SKLL+ KFKS  SLDGWE+RQG+YFQD  A+KYDGGMDAKFEFTE+  A FSGYVF RGG
Sbjct: 278 SKLLLAKFKSAESLDGWEIRQGTYFQDTTASKYDGGMDAKFEFTETERAEFSGYVFTRGG 337

Query: 330 YVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGASGDPSQSKLYFTRFSTKVG 389
           YVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYV+ILEAG S D SQSK YF R STK G
Sbjct: 338 YVELSKKLSLPLGTTLDRYEGLVLSVGGNGRSYVVILEAGPSSDMSQSKQYFARISTKAG 397

Query: 390 FCRVRVPFSSFRPVNPDDPVLDPFLVHTLTIRFEPRKQRSVDANATMKQDLRSFKLILEY 449
           FCRVRVPFS+FRPVNP+DP LDPFLVHTLTIRFEP++QR VD  A  +QDLRSF L+ EY
Sbjct: 398 FCRVRVPFSAFRPVNPEDPPLDPFLVHTLTIRFEPKRQRPVDGLAGAQQDLRSFSLVFEY 457

Query: 450 IKALPTGQETDFVLVSCSGQGIEPSRREQVLKAKQAGEDSLRRSGLGYTIVRPGPLEEEP 509
           IKALP GQETDF+LVSC+G G+E +RREQVLKAK+AGEDSLRRSGLGYTI+RPGPL+EEP
Sbjct: 458 IKALPAGQETDFILVSCTGSGVEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEP 517

Query: 510 GGQRTLIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVA 569
           GGQR LIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVC+EYVAE+G ELYELVA
Sbjct: 518 GGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCHEYVAEQGIELYELVA 577

Query: 570 HLPDKANNYLTPALSVLEKNT 590
           HLPDKANNYLTPALSVLEKNT
Sbjct: 578 HLPDKANNYLTPALSVLEKNT 598


>AT4G18810.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:10322263-10325735 REVERSE LENGTH=627
          Length = 627

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 203/465 (43%), Gaps = 81/465 (17%)

Query: 141 EGPMCEFAIPGAQSTVVLVVGATSRIGRIVVRKLMLRGYSVKALVRRADQEVIDLLPRSV 200
           E P+ E    G    ++LV GAT  +GR +V  L  RG  VKALVR  +++   +L   +
Sbjct: 113 EEPVAEMGTSG----IILVAGATGGVGRRIVDILRKRGLPVKALVRN-EEKARKMLGPEI 167

Query: 201 EVIVGDVGDPDT-VKAAVEGCNKIIYCATA----------------------RSTITGDL 237
           ++IV D+   +T V    +G  K+I   +                          I GD 
Sbjct: 168 DLIVADITKENTLVPEKFKGVRKVINAVSVIVGPKEGDTPERQKYNQGVRFFEPEIKGDS 227

Query: 238 FR-VDYRGVYNMSKAFQD----HNNKLAQLRAGKSSKSKLLITKFKSESSLDGWEVRQGS 292
              V+Y G+ N+  A +D     N KL     G ++   L       +  + G  V + +
Sbjct: 228 PELVEYIGMKNLINAVRDGVGLENGKLI-FGVGDNTFKDLPWGAL-DDVVMGG--VSESN 283

Query: 293 YFQDVVATKYDGGMDAKFEFTESGEAVFSGYV--FNRGGYVELSKKLSLPLGCTLDRYEG 350
           +  D+ A +  G              +F G V   N GG+  +  K + P    +  Y+G
Sbjct: 284 FIVDLTAGENGGPT-----------GIFKGIVSTTNNGGFTSVRTK-NFPEAENVSAYDG 331

Query: 351 LVLSVGGNGRSYVLILEAGASGDPSQSKLYFTRFSTKVG-FCRVRVPFSSFRPV-----N 404
           L L + G+G  Y LI+      D   +  Y   F T  G +  VR+PFSS RPV      
Sbjct: 332 LELRLKGDGLRYKLIVRTSQDWD---TVGYTASFDTSPGQWQSVRLPFSSLRPVFRARTV 388

Query: 405 PDDPVLDPFLVHTLTIRFEPRKQRSVDANATMKQDLRSFKLILEYIKALPTGQETD-FVL 463
            D P  +   + +L + F  + +     N T K+    F+L L  I+A      T  FV 
Sbjct: 389 TDAPPFNASSIISLQLMFS-KFEYDGKLNPTFKEG--PFELPLSSIRAYIQDPVTPRFVH 445

Query: 464 VSCSG------QGIEPSRR----------EQVLKAKQAGEDSLRRSGLGYTIVRPGPLEE 507
           V  +G       G++ S++          + +L  K  GED +R SG+ + IVRP  L E
Sbjct: 446 VGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIRDSGIPFAIVRPCALTE 505

Query: 508 EPGGQRTLIFDQGNRISQGISCADVADICVKALHDSTARNKSFDV 552
           EP G   LIF+QG+ I+  +S  +VA IC+ AL    A NK+F+V
Sbjct: 506 EPAGA-DLIFEQGDNITGKVSRDEVARICIAALESPYALNKTFEV 549


>AT4G18810.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:10322622-10325735 REVERSE LENGTH=596
          Length = 596

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 203/465 (43%), Gaps = 81/465 (17%)

Query: 141 EGPMCEFAIPGAQSTVVLVVGATSRIGRIVVRKLMLRGYSVKALVRRADQEVIDLLPRSV 200
           E P+ E    G    ++LV GAT  +GR +V  L  RG  VKALVR  +++   +L   +
Sbjct: 113 EEPVAEMGTSG----IILVAGATGGVGRRIVDILRKRGLPVKALVRN-EEKARKMLGPEI 167

Query: 201 EVIVGDVGDPDT-VKAAVEGCNKIIYCATA----------------------RSTITGDL 237
           ++IV D+   +T V    +G  K+I   +                          I GD 
Sbjct: 168 DLIVADITKENTLVPEKFKGVRKVINAVSVIVGPKEGDTPERQKYNQGVRFFEPEIKGDS 227

Query: 238 FR-VDYRGVYNMSKAFQD----HNNKLAQLRAGKSSKSKLLITKFKSESSLDGWEVRQGS 292
              V+Y G+ N+  A +D     N KL     G ++   L       +  + G  V + +
Sbjct: 228 PELVEYIGMKNLINAVRDGVGLENGKLI-FGVGDNTFKDLPWGAL-DDVVMGG--VSESN 283

Query: 293 YFQDVVATKYDGGMDAKFEFTESGEAVFSGYV--FNRGGYVELSKKLSLPLGCTLDRYEG 350
           +  D+ A +  G              +F G V   N GG+  +  K + P    +  Y+G
Sbjct: 284 FIVDLTAGENGGPT-----------GIFKGIVSTTNNGGFTSVRTK-NFPEAENVSAYDG 331

Query: 351 LVLSVGGNGRSYVLILEAGASGDPSQSKLYFTRFSTKVG-FCRVRVPFSSFRPV-----N 404
           L L + G+G  Y LI+      D   +  Y   F T  G +  VR+PFSS RPV      
Sbjct: 332 LELRLKGDGLRYKLIVRTSQDWD---TVGYTASFDTSPGQWQSVRLPFSSLRPVFRARTV 388

Query: 405 PDDPVLDPFLVHTLTIRFEPRKQRSVDANATMKQDLRSFKLILEYIKALPTGQETD-FVL 463
            D P  +   + +L + F  + +     N T K+    F+L L  I+A      T  FV 
Sbjct: 389 TDAPPFNASSIISLQLMFS-KFEYDGKLNPTFKEG--PFELPLSSIRAYIQDPVTPRFVH 445

Query: 464 VSCSG------QGIEPSRR----------EQVLKAKQAGEDSLRRSGLGYTIVRPGPLEE 507
           V  +G       G++ S++          + +L  K  GED +R SG+ + IVRP  L E
Sbjct: 446 VGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIRDSGIPFAIVRPCALTE 505

Query: 508 EPGGQRTLIFDQGNRISQGISCADVADICVKALHDSTARNKSFDV 552
           EP G   LIF+QG+ I+  +S  +VA IC+ AL    A NK+F+V
Sbjct: 506 EPAGA-DLIFEQGDNITGKVSRDEVARICIAALESPYALNKTFEV 549


>AT4G31530.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:15282281-15284064 FORWARD LENGTH=338
          Length = 338

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 14/88 (15%)

Query: 479 VLKAKQAGEDSLRRSGLGYTIVRPGPLEEEP--------------GGQRTLIFDQGNRIS 524
           VLK K+ GED LR SGL +TI+RPG L + P              G +R ++  QG+ + 
Sbjct: 212 VLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGQGDNLV 271

Query: 525 QGISCADVADICVKALHDSTARNKSFDV 552
             +S   VA+ C++AL     + K++++
Sbjct: 272 GEVSRLVVAEACIQALDIEFTQGKAYEI 299


>AT4G31530.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:15282281-15284064 FORWARD LENGTH=324
          Length = 324

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 14/88 (15%)

Query: 479 VLKAKQAGEDSLRRSGLGYTIVRPGPLEEEP--------------GGQRTLIFDQGNRIS 524
           VLK K+ GED LR SGL +TI+RPG L + P              G +R ++  QG+ + 
Sbjct: 212 VLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGQGDNLV 271

Query: 525 QGISCADVADICVKALHDSTARNKSFDV 552
             +S   VA+ C++AL     + K++++
Sbjct: 272 GEVSRLVVAEACIQALDIEFTQGKAYEI 299


>AT4G35250.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:16771401-16773269 REVERSE LENGTH=395
          Length = 395

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 150 PG--AQSTVVLVVGATSRIGRIVVRKLMLRGYSVKALVRRADQEVIDLLPRSVEVIVGDV 207
           PG   + T +LVVGAT  +GR +VR+ +  GY V+ LVR        L      V+  D+
Sbjct: 73  PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL 132

Query: 208 GDPDTVKAAVEGCNKIIYCATAR 230
             P+T+ A + G + +I CAT R
Sbjct: 133 SKPETIPATLVGIHTVIDCATGR 155


>AT2G37660.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:15795481-15796977 REVERSE LENGTH=325
          Length = 325

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 4/79 (5%)

Query: 479 VLKAKQAGEDSLRRSGLGYTIVRPGPLEEEPGGQRTLIFDQGNRI----SQGISCADVAD 534
           +L  K+  E  L  SG+ YTI+R G L+++ GG R L+  + + +    ++ I+ ADVA+
Sbjct: 223 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAE 282

Query: 535 ICVKALHDSTARNKSFDVC 553
           +CV+AL    A+ K+ D+ 
Sbjct: 283 VCVQALQLEEAKFKALDLA 301


>AT5G02240.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:451502-452984 FORWARD LENGTH=253
          Length = 253

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 479 VLKAKQAGEDSLRRSGLGYTIVRPGPLEEEPGGQRTLIFDQGNRISQ----GISCADVAD 534
           +L  K+  E  L  SG  YTI+R G L ++ GG R L+  + + + Q     +  ADVA+
Sbjct: 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAE 210

Query: 535 ICVKALHDSTARNKSFDV 552
           +C++AL    A+NK+FD+
Sbjct: 211 VCIQALLFEEAKNKAFDL 228


>AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold
           superfamily protein | chr5:6220872-6222125 REVERSE
           LENGTH=417
          Length = 417

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 157 VLVVGATSRIGRIVVRKLMLRGYSVKALVR-------RADQEVIDLLPRSVEVIVGDVGD 209
           VLVVG+T  IGR VV++++ RG++V A+ R       + D+E      +   V   DV +
Sbjct: 86  VLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIRGKNDKEETLKQLQGANVCFSDVTE 145

Query: 210 PDTVKAAVE----GCNKIIYCATARSTITGDLFRVDYRGVYN 247
            D ++ ++E    G + ++ C  +R+    D +++DY    N
Sbjct: 146 LDVLEKSIENLGFGVDVVVSCLASRNGGIKDSWKIDYEATKN 187