Miyakogusa Predicted Gene
- Lj0g3v0269859.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0269859.1 Non Chatacterized Hit- tr|I1K1W7|I1K1W7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.97,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopept,CUFF.17834.1
(605 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 665 0.0
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 446 e-125
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 414 e-116
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 403 e-112
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 387 e-107
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 373 e-103
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 373 e-103
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 373 e-103
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-101
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 363 e-100
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 2e-99
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 7e-98
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 354 8e-98
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 353 1e-97
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 3e-97
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 4e-96
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 347 2e-95
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 7e-95
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 3e-94
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 339 3e-93
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 336 2e-92
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 336 4e-92
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 334 1e-91
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 3e-91
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 332 6e-91
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 1e-90
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 327 1e-89
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 3e-88
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 1e-87
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 1e-86
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 3e-86
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 4e-86
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 314 9e-86
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 313 3e-85
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 8e-85
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 306 2e-83
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 303 3e-82
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 4e-82
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 302 4e-82
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 1e-80
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 8e-80
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 294 2e-79
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 3e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 3e-79
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 291 9e-79
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 291 1e-78
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 286 2e-77
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 283 3e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 280 2e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 275 7e-74
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 268 6e-72
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 264 1e-70
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 5e-70
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 255 5e-68
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 8e-68
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 243 2e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 243 3e-64
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 8e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 200 3e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 108 8e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 1e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 101 2e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 3e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 86 6e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 84 4e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 76 8e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 6e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 69 1e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 3e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 4e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 65 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 62 2e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 2e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 53 6e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/590 (51%), Positives = 429/590 (72%), Gaps = 2/590 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKE-NLDGDMFVGSALIELYSKCGEMNDAV 64
+PD+ T+ +ALK+C L+++ G MIHGF+KK+ L D++VGS+LI +Y KCG M +A+
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F E KPD+V W+S+V+G+E++G+P A+ FF RM + +V+PD VTL++ SAC +L
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
S+S+LGR +HGFV R G LSL NSLLN Y K+ + K A LF+ + +KDVISWS+++
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
ACY NGAA AL +FN+M+D EPN T++ L+ACA+A LE+GRK H+LA+ G E
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
E VSTAL+DMY+KC SPE A +F+RIP+KDVV+W L G+ GMAH+S+E F M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 305 L-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
L + RPDA+ +VK+L + SELG L+QA C H++V K GFD+N +IGASL+E+Y++C S
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGS 416
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
+ NA+KVF G+A KD V+W+S+I YG HG+G +AL+ F M S++KPN+VTF+SILS
Sbjct: 417 LGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
ACSHAGL+ EG+ IF +MVN Y+L P+ EHY ++VDLLGR+G+LD A++I MP P
Sbjct: 477 ACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTP 536
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+ G LLGAC IH N +M E AK LF L+ NHAGYY L+SN+Y V W N KLR+ +
Sbjct: 537 QILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSV 596
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
K+ +KK L +S++E++ +VH FVA D H E + ++ +L++LD+ M+E+
Sbjct: 597 KQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 235/476 (49%), Gaps = 24/476 (5%)
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
DA ++F E K + W +++ R E L FS M EE PD TL A AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 122 AQLSDSKLGRSIHGFVKR-CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
+L + G IHGFVK+ L + L + +SL+ +Y K G + A +F E+ D+++W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 181 SSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
SSM++ + NG+ A++ F M+ + P+ VTL++ + AC S GR +H +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
GF + ++ +L++ Y K + + AV++F I +KDV++W+ + Y + G A +++
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
VF +M+ DG P+ ++ +L A + L+Q H + G + + +L++MY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
KC S + A VF + KDVV W ++I+ + +G +++ F M ++ +P+ + +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
+L +CS G +E+ F V KY + +V+L R G L A + N + +
Sbjct: 371 KVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 480 QAGPHVWGALLGACHIH-----------HNIKMGEVAAKNLFPLDPNHAGYYTLLS 524
+ VW +L+ IH H +K EV PN + ++LS
Sbjct: 430 K-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV--------KPNEVTFLSILS 476
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 213/417 (51%), Gaps = 9/417 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + PD T+ + +C L +GR +HGF+ + D+ + ++L+ Y+K
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+AV +F + DV+ W++++ Y ++G AL F+ M + + P+ T++ A
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQA 273
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA D + GR H R GL+T + ++ +L+++Y K S + A +F +P KDV+SW
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSW 333
Query: 181 SSMLACYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
++++ + NG A +++ F+ M ++ P+ + +V L +C+ +LE+ + H +
Sbjct: 334 VALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
YGF+ + +L+++Y +C S NA +FN I KD V W L GY G K++E
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 300 VFCNML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAF-VTKSGFDNNEYIGASLIEM 357
F +M+ S V+P+ V + IL+A S G++ + + + V N A L+++
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDL 513
Query: 358 YAKCSSIDNANKVFRGMAYKDV-VIWSSIIAAYGFHGQGEE----ALKLFYQMANHS 409
+ +D A ++ + M + I +++ A H GE A KLF +NH+
Sbjct: 514 LGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHA 570
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 7/291 (2%)
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
K S A +F EM + + W+++L + L F+ M +P+ TL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 218 ALRACASASYLEEGRKIHQLA---VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
AL+AC + G IH V+ G +L V ++L+ MY+KC A+ +F+ +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAV 333
K D+V W+ + G+ + G ++++E F M ++ V PD V L+ +++A ++L +
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
C+H FV + GF N+ + SL+ YAK + A +F+ +A KDV+ WS++IA Y +G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNK 444
EAL +F M + +PN T + +L AC+ A +E+G ++ + K
Sbjct: 244 AAAEALLVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQGRKTHELAIRK 293
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 349/589 (59%), Gaps = 2/589 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + + LK C +L VG+ IHG L K D+F + L +Y+KC ++N+A +V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P+ D+V W +IV GY ++G +AL M E + P +T+VS A + L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRL 251
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+G+ IHG+ R G D+ ++++ +L+++Y K GS+++A LF M +++V+SW+SM+
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y N A+ +F +M+D+ ++P V+++ AL ACA LE GR IH+L+V G +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+V +L+ MY KC + A +F ++ + +V+W + G+A+ G ++ F M S
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
V+PD V ++TAI+EL + A +H V +S D N ++ +L++MYAKC +I
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A +F M+ + V W+++I YG HG G+ AL+LF +M + +KPN VTF+S++SACS
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT-IKPNGVTFLSVISACS 550
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H+GLVE G+ F +M Y + +HYG MVDLLGR G L+ A D I MP++ +V+
Sbjct: 551 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
GA+LGAC IH N+ E AA+ LF L+P+ GY+ LL+NIY W ++R +
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
L+K G SMVE+KNEVHSF + H +S +I+ L KL ++E Y
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 229/415 (55%), Gaps = 5/415 (1%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
H ++ L+ C L++L R I + K L + F + L+ L+ + G +++A VF
Sbjct: 38 HPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEP 94
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
VL+ +++ G+ + + AL FF RM ++V P C ++ ++
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G+ IHG + + G L L N+Y K + A +F MP++D++SW++++A Y+
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
NG A AL++ M ++ ++P+++T+VS L A ++ + G++IH A+ GF+ +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
STAL+DMY KC S E A +F+ + +++VV+W + Y + ++M +F ML +GV
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
+P V+++ L A ++LG L++ +H + G D N + SLI MY KC +D A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+F + + +V W+++I + +G+ +AL F QM + + +KP+ T++S+++A
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITA 447
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 207/390 (53%), Gaps = 5/390 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P T+ L + L+ + VG+ IHG+ + D + + +AL+++Y+KCG + A +
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + +VV W S++ Y ++ P+ A+ F +M + E V P V+++ A ACA L
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHACADLG 351
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D + GR IH GLD ++S+ NSL+++Y K + +A +F ++ + ++SW++M+
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+A NG +AL+ F++M + ++P+ T VS + A A S + IH + + +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
V+TAL+DMY KC + A IF+ + ++ V W + GY G ++E+F M
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFD-NNEYIGASLIEMYAKCSS 363
++P+ V + +++A S G+++ + C + + + ++ GA ++++ +
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA-MVDLLGRAGR 590
Query: 364 IDNANKVFRGMAYKDVV-IWSSIIAAYGFH 392
++ A M K V ++ +++ A H
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
T +PD+ T + + L + IHG + + LD ++FV +AL+++Y+KCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+F + V W +++ GY G + AL F M + P+ VT +S SAC+
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSH 551
Query: 124 LSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS-WS 181
+ G + + + ++ + ++++L G+ G + A +MP K ++ +
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 182 SML-AC 186
+ML AC
Sbjct: 612 AMLGAC 617
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/597 (36%), Positives = 349/597 (58%), Gaps = 5/597 (0%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + DS+T S KS L+ + G +HGF+ K VG++L+ Y K +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A +VF E + DV+ W SI+ GY +G E L+ F +M V + D T+VS +
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGIEIDLATIVSVFAG 305
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA LGR++H + N+LL++Y K G + SA+ +FREM D+ V+S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+SM+A YA G A A+ LF EM ++ I P+ T+ + L CA L+EG+++H+
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+ VS ALMDMY KC S + A +F+ + KD+++W + GGY++ A++++ +
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 301 FCNMLSDGVR--PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
F N+L + R PD + +L A + L + +H ++ ++G+ ++ ++ SL++MY
Sbjct: 486 F-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
AKC ++ A+ +F +A KD+V W+ +IA YG HG G+EA+ LF QM + ++ ++++F
Sbjct: 545 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISF 603
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+S+L ACSH+GLV+EG F+IM ++ ++ P EHY +VD+L R G+L +A I NMP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 479 MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAK 538
+ +WGALL C IHH++K+ E A+ +F L+P + GYY L++NIY + W +
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Query: 539 LRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
LR I + L+K G S +E+K V+ FVA D + E++ I LRK+ +M EE Y
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 780
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 225/461 (48%), Gaps = 4/461 (0%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T+ L+ C + L+ G+ + F++ D +GS L +Y+ CG++ +A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E + W ++ +SG ++ F +M + V D T + + + L
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G +HGF+ + G S+ NSL+ Y K + SA +F EM ++DVISW+S++ Y
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
NG A L +F +M+ IE + T+VS CA + + GR +H + V F E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
L+DMY KC ++A +F + + VV++ + GYA G+A +++++F M +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
G+ PD + +L + +L + +H ++ ++ + ++ +L++MYAKC S+ A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
VF M KD++ W++II Y + EAL LF + P++ T +L AC+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 428 AGLVEEGITIFD-IMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
++G I IM N Y D +VD+ + G L
Sbjct: 512 LSAFDKGREIHGYIMRNGY--FSDRHVANSLVDMYAKCGAL 550
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/566 (34%), Positives = 335/566 (59%), Gaps = 5/566 (0%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERS 88
+ IH L L F+ + LI S G++ A +VF + P+P + W +I+ GY R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSL 148
+ AL +S M L VSPD T AC+ LS ++GR +H V R G D + +
Sbjct: 98 NHFQDALLMYSNMQ-LARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 149 ANSLLNLYGKTGSIKSAEILFR--EMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK 206
N L+ LY K + SA +F +P++ ++SW+++++ YA NG AL++F++M
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 207 RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
++P+WV LVS L A L++GR IH V G E+E + +L MY KC A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+F+++ +++ W + GYA+ G A +++++F M++ VRPD +++ ++A +++
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
G L+QA ++ +V +S + ++ +I ++LI+M+AKC S++ A VF +DVV+WS++I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
YG HG+ EA+ L+ M + PN VTF+ +L AC+H+G+V EG F+ M + ++
Sbjct: 397 VGYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
+ P +HY ++DLLGR G LD+A ++I MP+Q G VWGALL AC H ++++GE AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 507 KNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
+ LF +DP++ G+Y LSN+Y + W A++R +KE L K +G S VE++ + +F
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574
Query: 567 VASDRFHDESDQIFEVLRKLDVKMRE 592
D+ H ++I + ++ +++E
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 222/397 (55%), Gaps = 4/397 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A PDS T LK+C GL L++GR +H + + D D+FV + LI LY+KC +
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 63 AVEVFMEYPKPD--VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A VF P P+ +V WT+IV+ Y ++G P AL FS+M + +V PD V LVS +A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM-DVKPDWVALVSVLNA 231
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
L D K GRSIH V + GL+ L SL +Y K G + +A+ILF +M ++I W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++M++ YA NG A A+D+F+EMI+K + P+ +++ SA+ ACA LE+ R +++
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+ + +S+AL+DM+ KC S E A +F+R +DVV W+ + GY G A +++ +
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
+ M GV P+ V + +L A + G++++ + + + A +I++ +
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 361 CSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGE 396
+D A +V + M + V +W ++++A H E
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 224 SASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAV 283
SA++ + ++IH + G + + T L+ A +F+ +P+ + W
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
+ GY+ ++ ++ NM V PD+ +L A S L LQ +HA V + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY--KDVVIWSSIIAAYGFHGQGEEALKL 401
FD + ++ LI +YAKC + +A VF G+ + +V W++I++AY +G+ EAL++
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 402 FYQMANHSDLKPNKVTFISILSACS-----------HAGLVEEGITI 437
F QM D+KP+ V +S+L+A + HA +V+ G+ I
Sbjct: 210 FSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/596 (34%), Positives = 333/596 (55%), Gaps = 4/596 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+S T + A+ + G + GR+IHG + D ++ +GS ++++Y K + DA +
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P+ D +LW ++++GY ++ ++ F + D TL+ A A+L
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ +LG IH + G +H + ++LY K G IK LFRE D++++++M+
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y NG +L LF E++ TLVS + + +L IH + F
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLS 352
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+VSTAL +Y K + E+A +F+ P+K + +W + GY + G+ ++ +F M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
P+ V + IL+A ++LG L +H V + F+++ Y+ +LI MYAKC SI
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A ++F M K+ V W+++I+ YG HGQG+EAL +FY+M N S + P VTF+ +L AC
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPTPVTFLCVLYAC 531
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SHAGLV+EG IF+ M+++Y P +HY MVD+LGR G L RAL I M ++ G V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W LLGAC IH + + ++ LF LDP++ GY+ LLSNI+ D+N+ AA +R K+
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQLKI 601
+L K G +++E+ H F + D+ H + +I+E L KL+ KMRE Y+ + ++
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 707
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 11/413 (2%)
Query: 30 MIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSG 89
++HGF D+ + + L + S G + A ++F+ +PDV L+ ++ G+ +
Sbjct: 44 ILHGF------RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
+P +L+ F+ + ++ P+ T A SA + D + GR IHG G D+ L L
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR-I 208
++++ +Y K ++ A +F MP+KD I W++M++ Y N ++ +F ++I++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+ TL+ L A A L G +IH LA G V T + +Y KC +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F K D+VA+ + GY G S+ +F ++ G R + LV L +S G
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS-LVPVS--GH 334
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L +H + KS F ++ + +L +Y+K + I++A K+F K + W+++I+
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
Y +G E+A+ LF +M S+ PN VT ILSAC+ G + G + D++
Sbjct: 395 YTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
+ H + +GF + ++ T L + A DIF + + DV + VL G++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 293 MAHKSMEVFCNML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
H S+ VF ++ S ++P++ ++A S + +H G D+ +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDL 411
+++++MY K +++A KVF M KD ++W+++I+ Y + E++++F + N S
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 412 KPNKVTFISILSACSHAGLVEEGITI 437
+ + T + IL A + + G+ I
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQI 243
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/592 (32%), Positives = 335/592 (56%), Gaps = 1/592 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P++ T L C +++G +HG + +D + + ++L+ +YSKCG +DA ++
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + D V W +++GY +SG E +L FF M + V PD +T S + ++ +
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKFEN 355
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ + IH ++ R + + L ++L++ Y K + A+ +F + DV+ +++M++
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y NG ++L++F ++ +I PN +TLVS L L+ GR++H + GF+
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+ A++DMY KC A +IF R+ K+D+V+W + A++ ++++F M
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G+ D V++ L+A + L +H F+ K ++ Y ++LI+MYAKC ++
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A VF+ M K++V W+SIIAA G HG+ +++L LF++M S ++P+++TF+ I+S+C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H G V+EG+ F M Y + P EHY +VDL GR G L A + + +MP VW
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
G LLGAC +H N+++ EVA+ L LDP+++GYY L+SN + + W + K+RSL+KE
Sbjct: 716 GTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQ 598
++K+ G S +E+ H FV+ D H ES I+ +L L ++R E Y Q
Sbjct: 776 EVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 250/494 (50%), Gaps = 4/494 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T +K+CV L+ + + + +D + FV S+LI+ Y + G+++ ++
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + D V+W ++ GY + G + + FS M ++++SP+ VT S CA
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLL 254
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG +HG V G+D S+ NSLL++Y K G A LFR M D ++W+ M++
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y +G +L F EMI + P+ +T S L + + LE ++IH + + L+
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+++AL+D Y KC A +IF++ DVV + + GY G+ S+E+F ++
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
+ P+ + LV IL I L L+ LH F+ K GFDN IG ++I+MYAKC ++
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A ++F ++ +D+V W+S+I A+ +F QM S + + V+ + LSAC+
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG-VSGICYDCVSISAALSACA 553
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
+ G I M+ K+ L D ++D+ + G L A+++ M + W
Sbjct: 554 NLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSW 611
Query: 487 GALLGACHIHHNIK 500
+++ AC H +K
Sbjct: 612 NSIIAACGNHGKLK 625
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 214/413 (51%), Gaps = 4/413 (0%)
Query: 12 VSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF--ME 69
+S+ L++C L G+ +H FL ++ GD + ++ +Y+ CG +D ++F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
+ + W SI++ + R+G ALAF+ +M VSPD T AC L + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNFKG 156
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
+ V G+D + +A+SL+ Y + G I LF + KD + W+ ML YA
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
GA + + F+ M +I PN VT L CAS ++ G ++H L V G + E ++
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+L+ MY KC ++A +F + + D V W + GY ++G+ +S+ F M+S GV
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
PDA+ +L ++S+ L+ +H ++ + + ++ ++LI+ Y KC + A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+F DVV+++++I+ Y +G ++L++F + + PN++T +SIL
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK-VKISPNEITLVSIL 448
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 333/587 (56%), Gaps = 5/587 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD +T L++C G+ L G+ +H + + + D+ V +ALI +Y KCG++ A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F P+ D++ W ++++GY +G L F M L V PD +TL S SAC L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELLG 311
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D +LGR IH +V G +S+ NSL +Y GS + AE LF M KD++SW++M++
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y N A+D + M ++P+ +T+ + L ACA+ L+ G ++H+LA+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
V+ L++MY KC + A+DIF+ IP+K+V++W + G +++ +F +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
++P+A+ L L A + +G L +HA V ++G ++++ +L++MY +C ++
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A F KDV W+ ++ Y GQG ++LF +M S ++P+++TFIS+L C
Sbjct: 551 TAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGC 608
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
S + +V +G+ F M Y + P+ +HY +VDLLGR GEL A I MP+ P V
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
WGALL AC IHH I +GE++A+++F LD GYY LL N+Y W AK+R ++KE
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMRE 592
N L G S VE+K +VH+F++ D++H ++ +I VL KM E
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 195/369 (52%), Gaps = 2/369 (0%)
Query: 46 VGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLE 105
+G+A + ++ + G + DA VF + + ++ W +V GY + G + A+ + RM +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
V PD T C + D G+ +H V R G + + + N+L+ +Y K G +KSA
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 166 EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
+LF MP +D+ISW++M++ Y +NG L+LF M ++P+ +TL S + AC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
GR IH ++ GF ++ +V +L MYL S A +F+R+ +KD+V+W +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
GY + K+++ + M D V+PD + + +L+A + LG L V LH K+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 346 NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
+ + +LI MY+KC ID A +F + K+V+ W+SIIA + + EAL QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 406 ANHSDLKPN 414
L+PN
Sbjct: 491 K--MTLQPN 497
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 32/388 (8%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
+ +PD TV+ L +C L L+ G +H K L + V + LI +YSKC ++ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+++F P+ +V+ WTSI+ G + AL F +M + + P+ +TL +A +ACA+
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAACAR 510
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ G+ IH V R G+ L N+LL++Y + G + +A F KDV SW+ +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNIL 569
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
L Y++ G + ++LF+ M+ R+ P+ +T +S L C+ + + +G YG
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGV 629
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG--------YAETGMA 294
++D+ + + A ++P D W L E
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQ 689
Query: 295 H------KSMEVF---CNMLSDGVRPDAVALVKILTAISELGVLQQAVC--------LHA 337
H KS+ + CN+ +D + VA K+ + E G+ A C +HA
Sbjct: 690 HIFELDKKSVGYYILLCNLYADCGKWREVA--KVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 338 FVTKSGF-DNNEYIGASLIEMYAKCSSI 364
F++ + + I L Y K S +
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
NG A+ L N M + R+ + V+ +R C EEG K++ +A+S L +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML-SDG 308
A + M+++ + +A +F ++ ++++ +W VL GGYA+ G ++M ++ ML G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
V+PD +L + L + +H V + G++ + + +LI MY KC + +A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 369 KVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+F M +D++ W+++I+ Y +G E L+LF+ M S + P+ +T S++SAC
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELL 310
Query: 429 G 429
G
Sbjct: 311 G 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M T +P++ T++ AL +C + L G+ IH + + + D F+ +AL+++Y +CG M
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
N A F K DV W ++TGY G + + F RM V V PD +T +S
Sbjct: 550 NTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCG 607
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVIS 179
C++ + G ++ G+ +L +++L G+ G ++ A ++MP D
Sbjct: 608 CSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 180 WSSML-AC 186
W ++L AC
Sbjct: 668 WGALLNAC 675
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 49/631 (7%)
Query: 1 MHATA-RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE 59
MH+ + PD++T K+C + + G H ++FVG+AL+ +YS+C
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
++DA +VF E DVV W SI+ Y + G P++AL FSRM PD +TLV+
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
CA L LG+ +H F + ++ + N L+++Y K G + A +F M KDV+S
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIE------------------------------ 209
W++M+A Y+ G +A+ LF +M +++I+
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 210 -----PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL-------ETTVSTALMDMY 257
PN VTL+S L CAS L G++IH A+ Y +L E V L+DMY
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 258 LKCSSPENAVDIFNRI-PK-KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG--VRPDA 313
KC + A +F+ + PK +DVV W V+ GGY++ G A+K++E+ M + RP+A
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE-YIGASLIEMYAKCSSIDNANKVFR 372
+ L A + L L+ +HA+ ++ + ++ LI+MYAKC SI +A VF
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
M K+ V W+S++ YG HG GEEAL +F +M K + VT + +L ACSH+G+++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
+G+ F+ M + + P EHY +VDLLGR G L+ AL +I MPM+ P VW A L
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 493 CHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
C IH +++GE AA+ + L NH G YTLLSN+Y W + ++RSL++ +KK
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
G S VE +F D+ H + +I++VL
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 192/421 (45%), Gaps = 50/421 (11%)
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD--VI 178
C +S KL IH + G+ T L+L + L++ Y G + A L R P D V
Sbjct: 38 CKTISQVKL---IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W+S++ Y DNG A L LF M P+ T +AC S + G H L+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ GF V AL+ MY +C S +A +F+ + DVV+W + YA+ G ++
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 299 EVFCNMLSD-GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
E+F M ++ G RPD + LV +L + LG LH F S N ++G L++M
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH--------- 408
YAKC +D AN VF M+ KDVV W++++A Y G+ E+A++LF +M
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 409 -------------------------SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
S +KPN+VT IS+LS C+ G + G I +
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI- 392
Query: 444 KYQLMPDSEHYG-------IMVDLLGRMGELDRALDIINNM-PMQAGPHVWGALLGACHI 495
KY + +G ++D+ + ++D A + +++ P + W ++G
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 496 H 496
H
Sbjct: 453 H 453
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 322/589 (54%), Gaps = 2/589 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS+T++ + +C L G+ +H + K + + AL+ LY+KC ++ A++
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F+E +VVLW ++ Y + F +M + EE+ P+ T S C +L D
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI-EEIVPNQYTYPSILKTCIRLGD 505
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+LG IH + + + + + L+++Y K G + +A + KDV+SW++M+A
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y AL F +M+D+ I + V L +A+ ACA L+EG++IH A GF +
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
AL+ +Y +C E + F + D +AW L G+ ++G +++ VF M
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
+G+ + + A SE ++Q +HA +TK+G+D+ + +LI MYAKC SI +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A K F ++ K+ V W++II AY HG G EAL F QM HS+++PN VT + +LSACS
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI-HSNVRPNHVTLVGVLSACS 804
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H GLV++GI F+ M ++Y L P EHY +VD+L R G L RA + I MP++ VW
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
LL AC +H N+++GE AA +L L+P + Y LLSN+Y V K W R +KE
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+KK GQS +E+KN +HSF D+ H +D+I E + L + E Y
Sbjct: 925 GVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 224/464 (48%), Gaps = 3/464 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + S L +C ++ LE+G +HG + K D +V +AL+ LY G + A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + D V + +++ G + G E A+ F RM L+ + PD TL S AC+
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGT 404
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G+ +H + + G ++ + +LLNLY K I++A F E ++V+ W+ ML
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y N+ +F +M + I PN T S L+ C LE G +IH + F+L
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V + L+DMY K + A DI R KDVV+W + GY + K++ F ML
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G+R D V L ++A + L L++ +HA SGF ++ +L+ +Y++C I+
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
+ F D + W+++++ + G EEAL++F +M N + N TF S + A S
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAAS 703
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
+++G + + + K ++E ++ + + G + A
Sbjct: 704 ETANMKQGKQVHAV-ITKTGYDSETEVCNALISMYAKCGSISDA 746
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 230/472 (48%), Gaps = 7/472 (1%)
Query: 6 RPDSHTVSIALKSCVGLQ-KLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
RP+ T+ L+ C+ L+ GR +H + K LD + + L + Y G++ A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF E P+ + W ++ F RM V E V+P+ T AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGG 199
Query: 125 SDS-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
S + + IH + GL + N L++LY + G + A +F + KD SW +M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ + N A+ LF +M I P S L AC LE G ++H L + GF
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+T V AL+ +Y + +A IF+ + ++D V + L G ++ G K+ME+F
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M DG+ PD+ L ++ A S G L + LHA+ TK GF +N I +L+ +YAKC+
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
I+ A F ++VV+W+ ++ AYG + ++F QM ++ PN+ T+ SIL
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILK 498
Query: 424 ACSHAGLVEEGITIF-DIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
C G +E G I I+ +QL ++ +++D+ ++G+LD A DI+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQL--NAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 215/432 (49%), Gaps = 3/432 (0%)
Query: 7 PDSHTVSIALKSCVGLQ-KLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
P+ T S L++C G +V IH + + L V + LI+LYS+ G ++ A
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF D W ++++G ++ A+ F M VL + P P S SAC ++
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIE 302
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++G +HG V + G + + N+L++LY G++ SAE +F M +D +++++++
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ G A++LF M +EP+ TL S + AC++ L G+++H GF
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ AL+++Y KC+ E A+D F ++VV W V+ Y S +F M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+ + P+ IL LG L+ +H+ + K+ F N Y+ + LI+MYAK +D
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A + A KDVV W+++IA Y + ++AL F QM + ++ ++V + +SAC
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSAC 601
Query: 426 SHAGLVEEGITI 437
+ ++EG I
Sbjct: 602 AGLQALKEGQQI 613
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 154/297 (51%), Gaps = 7/297 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R D ++ A+ +C GLQ L+ G+ IH D+ +AL+ LYS+CG++ ++
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
F + D + W ++V+G+++SG E AL F RM E + + T SA A ++ +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN-REGIDNNNFTFGSAVKAASETA 706
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ K G+ +H + + G D+ + N+L+++Y K GSI AE F E+ K+ +SW++++
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG-RKIHQLAVSYGFE 244
Y+ +G + ALD F++MI + PN VTLV L AC+ +++G + YG
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEV 300
+ ++DM + A + +P K D + W L + HK+ME+
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA----CVVHKNMEI 879
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 6/369 (1%)
Query: 107 VSPDPVTLVSAASACAQLSDS-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
+ P+ TL C + + S GR +H + + GLD++ L+ L + Y G + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 166 EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
+F EMP++ + +W+ M+ A LF M+ + + PN T L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 226 SY-LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
S + +IH + G T V L+D+Y + + A +F+ + KD +W +
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
G ++ +++ +FC+M G+ P A +L+A ++ L+ LH V K GF
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
++ Y+ +L+ +Y ++ +A +F M+ +D V ++++I G GE+A++LF +
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 405 MANHSD-LKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGR 463
M H D L+P+ T S++ ACS G + G + K +++ G +++L +
Sbjct: 380 M--HLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAK 436
Query: 464 MGELDRALD 472
+++ ALD
Sbjct: 437 CADIETALD 445
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 320/559 (57%), Gaps = 6/559 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T K+ L+ +++G ++HG + + D +V +AL+ +Y G++ A +V
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F DV+ W ++++GY R+G AL F M V E V D T+VS C L D
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM-VNESVDLDHATIVSMLPVCGHLKD 233
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
++GR++H V+ L + + N+L+N+Y K G + A +F M +DVI+W+ M+
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y ++G NAL+L M + + PN VT+ S + C A + +G+ +H AV +
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD 353
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+ T+L+ MY KC + +F+ K W+ + G + + ++ +F M
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
+ V P+ L +L A + L L+QA+ +H ++TK+GF ++ L+ +Y+KC ++++
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 367 ANKVFRGMA----YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
A+K+F G+ KDVV+W ++I+ YG HG G AL++F +M S + PN++TF S L
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV-RSGVTPNEITFTSAL 532
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
+ACSH+GLVEEG+T+F M+ Y+ + S HY +VDLLGR G LD A ++I +P +
Sbjct: 533 NACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
VWGALL AC H N+++GE+AA LF L+P + G Y LL+NIY W + K+RS+
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
Query: 543 IKENRLKKVLGQSMVELKN 561
++ L+K G S +E+++
Sbjct: 653 MENVGLRKKPGHSTIEIRS 671
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 226/454 (49%), Gaps = 8/454 (1%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEV 107
S L Y+ CG + A ++F E P+ ++ + ++ Y R G A++ F RM V E V
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRM-VSEGV 111
Query: 108 S--PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
PD T A A +L KLG +HG + R + N+LL +Y G ++ A
Sbjct: 112 KCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMA 171
Query: 166 EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
+F M ++DVISW++M++ Y NG +AL +F+ M+++ ++ + T+VS L C
Sbjct: 172 RDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
LE GR +H+L + V AL++MYLKC + A +F+R+ ++DV+ W +
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
GY E G ++E+ M +GVRP+AV + +++ + + CLH + +
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 346 NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
++ I SLI MYAKC +D +VF G + WS+IIA + +AL LF +M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 406 ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMG 465
D++PN T S+L A + + + + I + K M + +V + + G
Sbjct: 412 -RREDVEPNIATLNSLLPAYAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 466 ELDRALDIINNMPMQAGPH---VWGALLGACHIH 496
L+ A I N + + +WGAL+ +H
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 146/286 (51%), Gaps = 7/286 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP++ T++ + C K+ G+ +HG+ ++ + D+ + ++LI +Y+KC ++
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF K W++I+ G ++ AL F RM E+V P+ TL S A A L+
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR-REDVEPNIATLNSLLPAYAALA 434
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWS 181
D + +IH ++ + G + L A L+++Y K G+++SA +F + + KDV+ W
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS- 240
++++ Y +G NAL +F EM+ + PN +T SAL AC+ + +EEG + + +
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
Y + T ++D+ + + A ++ IP + W L
Sbjct: 555 YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 333/590 (56%), Gaps = 5/590 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P++ T K+C L + M+H L K D+FVG+A ++++ KC ++ A +V
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKV 109
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P+ D W ++++G+ +SG + A + F M L E++PD VT+++ + +
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR-LNEITPDSVTVMTLIQSASFEKS 168
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP--DKDVISWSSML 184
KL ++H R G+D +++AN+ ++ YGK G + SA+++F + D+ V+SW+SM
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
Y+ G A +A L+ M+ + +P+ T ++ +C + L +GR IH A+ G +
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+ + MY K +A +F+ + + V+W V+ GYAE G +++ +F M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD-NNEYIGASLIEMYAKCSS 363
+ G +PD V L+ +++ + G L+ + A G +N I +LI+MY+KC S
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
I A +F K VV W+++IA Y +G EALKLF +M + D KPN +TF+++L
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMID-LDYKPNHITFLAVLQ 467
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
AC+H+G +E+G F IM Y + P +HY MVDLLGR G+L+ AL++I NM +
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA 527
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+WGALL AC IH N+K+ E AA++LF L+P A Y ++NIY W A++RS++
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIM 587
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
K+ +KK G+S++++ + HSF + H E++ I+ L L + +++
Sbjct: 588 KQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T SC + L GR+IH D D+ + I +YSK + A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F V WT +++GY G + ALA F M E PD VTL+S S C +
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFG 371
Query: 126 DSKLGRSI--HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ G+ I + C D ++ + N+L+++Y K GSI A +F P+K V++W++M
Sbjct: 372 SLETGKWIDARADIYGCKRD-NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYG 242
+A YA NG AL LF++MID +PN +T ++ L+ACA + LE+G + H + Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 243 FELETTVSTALMDMYLKCSSPENAVD-IFNRIPKKDVVAWAVLF 285
+ ++D+ + E A++ I N K D W L
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
L+R V +W+ + + +L LF EM EPN T +ACA +
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
+ +H + F + V TA +DM++KC+S + A +F R+P++D W + G
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
+ ++G K+ +F M + + PD+V ++ ++ + S L+ +HA + G D
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYKD--VVIWSSIIAAYGFHGQGEEALKLFYQM 405
+ + I Y KC +D+A VF + D VV W+S+ AY G+ +A L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 406 ANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+ KP+ TFI++ ++C + + +G I
Sbjct: 248 L-REEFKPDLSTFINLAASCQNPETLTQGRLI 278
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 309/556 (55%), Gaps = 8/556 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIH-GFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
R D S ALK+C LQ L+ G+ IH +K + D + G L+++Y+KCGE+ A
Sbjct: 139 RYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAH 196
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF + +VV WTS++ GY ++ E L F+RM V + T + AC +L
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKL 255
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
S G+ HG + + G++ L SLL++Y K G I +A +F E D++ W++M+
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
Y NG+ AL LF +M I+PN VT+ S L C LE GR +H L++ G
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI- 374
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+T V+ AL+ MY KC +A +F +KD+VAW + G+++ G H+++ +F M
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF--DNNEYIGASLIEMYAKCS 362
S+ V P+ V + + +A + LG L LHA+ K GF ++ ++G +L++ YAKC
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+A +F + K+ + WS++I YG G +L+LF +M KPN+ TF SIL
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSIL 553
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
SAC H G+V EG F M Y P ++HY MVD+L R GEL++ALDII MP+Q
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 613
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
+GA L C +H +GE+ K + L P+ A YY L+SN+Y D W+ A ++R+L
Sbjct: 614 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNL 673
Query: 543 IKENRLKKVLGQSMVE 558
+K+ L K+ G S +E
Sbjct: 674 MKQRGLSKIAGHSTME 689
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 229/482 (47%), Gaps = 13/482 (2%)
Query: 14 IALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKP 73
+ L C + L R HG L L GD+ + + L+ LY G DA VF + P+P
Sbjct: 49 LLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI 133
D LW ++ Y + + + + + D + A AC +L D G+ I
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYD-LLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 134 H-GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
H VK D + LL++Y K G IKSA +F ++ ++V+ W+SM+A Y N
Sbjct: 165 HCQLVKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
L LFN M + + N T + + AC S L +G+ H V G EL + + T+
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L+DMY+KC NA +FN D+V W + GY G ++++ +F M ++P+
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSG-FDNNEYIGASLIEMYAKCSSIDNANKVF 371
V + +L+ + L+ +H K G +D N + +L+ MYAKC +A VF
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVF 400
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
+ KD+V W+SII+ + +G EAL LF++M N + PN VT S+ SAC+ G +
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSL 459
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGI-MVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
G ++ V L S H G ++D + G+ A I + + + W A++
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMI 518
Query: 491 GA 492
G
Sbjct: 519 GG 520
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 12/353 (3%)
Query: 86 ERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG-----RSIHGFVKRC 140
R G P ++F + ++ D +L AAS+ L SK R HG +
Sbjct: 11 RRFGFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGN 70
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLF 200
GL +S+A L++LYG G K A ++F ++P+ D W ML CY N + + L+
Sbjct: 71 GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 201 NEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGFELETTVSTALMDMYLK 259
+ ++ + + AL+AC L+ G+KIH QL F + V T L+DMY K
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF--DNVVLTGLLDMYAK 188
Query: 260 CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
C ++A +FN I ++VV W + GY + + + + +F M + V + +
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 320 LTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV 379
+ A ++L L Q H + KSG + + + SL++MY KC I NA +VF ++ D+
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
V+W+++I Y +G EAL LF +M ++KPN VT S+LS C GL+E
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKG-VEIKPNCVTIASVLSGC---GLIE 357
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 345/602 (57%), Gaps = 13/602 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T LK+C + + G IH K D++V ++LI LYS+ + +A +
Sbjct: 151 PDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P D+ W ++++GY +SG + AL + + + D VT+VS SAC + D
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-----DSVTVVSLLSACTEAGD 262
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G +IH + + GL++ L ++N L++LY + G ++ + +F M +D+ISW+S++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y N A+ LF EM RI+P+ +TL+S + + R + + G+ LE
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 247 -TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
T+ A++ MY K ++A +FN +P DV++W + GYA+ G A +++E++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 306 SDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+G + + V +L A S+ G L+Q + LH + K+G + ++ SL +MY KC +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
++A +F + + V W+++IA +GFHG GE+A+ LF +M + +KP+ +TF+++LSA
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSA 561
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
CSH+GLV+EG F++M Y + P +HYG MVD+ GR G+L+ AL I +M +Q
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+WGALL AC +H N+ +G++A+++LF ++P H GY+ LLSN+Y W ++RS+
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY--EHQLKIE 602
L+K G S +E+ N+V F ++ H ++++ L L K++ Y +H+ ++
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 603 EV 604
+V
Sbjct: 742 DV 743
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 259/524 (49%), Gaps = 26/524 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D HT+ + C LQ + +H L ++ + + L+ LY G + A F
Sbjct: 56 DVHTL---FRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
DV W +++GY R+G + FS + ++PD T S AC + D
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID- 168
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G IH + G + +A SL++LY + ++ +A ILF EMP +D+ SW++M++ Y
Sbjct: 169 --GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+G A AL L N + + ++ VT+VS L AC A G IH ++ +G E E
Sbjct: 227 CQSGNAKEALTLSNGL--RAMDS--VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
VS L+D+Y + + +F+R+ +D+++W + Y +++ +F M
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG-FDNNEYIGASLIEMYAKCSSIDN 366
++PD + L+ + + +S+LG ++ + F + G F + IG +++ MYAK +D+
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A VF + DV+ W++II+ Y +G EA++++ M ++ N+ T++S+L ACS
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
AG + +G+ + ++ K L D + D+ G+ G L+ AL + +P + W
Sbjct: 463 QAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPW 520
Query: 487 GALLGACHIHHNIKMGEVAAKNLFP------LDPNHAGYYTLLS 524
L+ ACH H GE A LF + P+H + TLLS
Sbjct: 521 NTLI-ACHGFHG--HGEKAVM-LFKEMLDEGVKPDHITFVTLLS 560
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 333/615 (54%), Gaps = 33/615 (5%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M++ PD +T L +C + G IHG + K D+FV ++L+ Y++CGE+
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A +VF E + +VV WTS++ GY R + A+ F RM EEV+P+ VT+V SA
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA+L D + G ++ F++ G++ + + ++L+++Y K +I A+ LF E ++
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++M + Y G AL +FN M+D + P+ ++++SA+ +C+ + G+ H +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG-------- 292
GFE + AL+DMY+KC + A IF+R+ K VV W + GY E G
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 293 -----------------------MAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGV 328
+ +++EVFC+M S +GV D V ++ I +A LG
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L A ++ ++ K+G + +G +L++M+++C ++A +F + +DV W++ I A
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
G E A++LF M LKP+ V F+ L+ACSH GLV++G IF M+ + +
Sbjct: 546 MAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
P+ HYG MVDLLGR G L+ A+ +I +MPM+ +W +LL AC + N++M AA+
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
+ L P G Y LLSN+Y W++ AK+R +KE L+K G S ++++ + H F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 569 SDRFHDESDQIFEVL 583
D H E I +L
Sbjct: 725 GDESHPEMPNIEAML 739
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 167/317 (52%), Gaps = 9/317 (2%)
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS----AEILFRE 171
S+ C + + K+ H + + GLD +S L+ + G+ +S E+
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
++S++ YA +G A+ LF M++ I P+ T L ACA + G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 232 RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAET 291
+IH L V G+ + V +L+ Y +C ++A +F+ + +++VV+W + GYA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 292 GMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
A ++++F M+ D V P++V +V +++A ++L L+ ++AF+ SG + N+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
++L++MY KC++ID A ++F ++ + +++ + Y G EAL +F M + S
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SG 332
Query: 411 LKPNKVTFISILSACSH 427
++P++++ +S +S+CS
Sbjct: 333 VRPDRISMLSAISSCSQ 349
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 119/231 (51%), Gaps = 7/231 (3%)
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN---AVDIF-NR 272
S+L+ C + ++E + H+ G + + + T L+ + + E+ A ++F N
Sbjct: 37 SSLKNCKT---IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
+ L GYA +G+ ++++ +F M++ G+ PD L+A ++
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 333 VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+ +H + K G+ + ++ SL+ YA+C +D+A KVF M+ ++VV W+S+I Y
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
++A+ LF++M ++ PN VT + ++SAC+ +E G ++ + N
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 333/615 (54%), Gaps = 33/615 (5%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M++ PD +T L +C + G IHG + K D+FV ++L+ Y++CGE+
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A +VF E + +VV WTS++ GY R + A+ F RM EEV+P+ VT+V SA
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA+L D + G ++ F++ G++ + + ++L+++Y K +I A+ LF E ++
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++M + Y G AL +FN M+D + P+ ++++SA+ +C+ + G+ H +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG-------- 292
GFE + AL+DMY+KC + A IF+R+ K VV W + GY E G
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 293 -----------------------MAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGV 328
+ +++EVFC+M S +GV D V ++ I +A LG
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L A ++ ++ K+G + +G +L++M+++C ++A +F + +DV W++ I A
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
G E A++LF M LKP+ V F+ L+ACSH GLV++G IF M+ + +
Sbjct: 546 MAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
P+ HYG MVDLLGR G L+ A+ +I +MPM+ +W +LL AC + N++M AA+
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
+ L P G Y LLSN+Y W++ AK+R +KE L+K G S ++++ + H F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 569 SDRFHDESDQIFEVL 583
D H E I +L
Sbjct: 725 GDESHPEMPNIEAML 739
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 167/317 (52%), Gaps = 9/317 (2%)
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS----AEILFRE 171
S+ C + + K+ H + + GLD +S L+ + G+ +S E+
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
++S++ YA +G A+ LF M++ I P+ T L ACA + G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 232 RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAET 291
+IH L V G+ + V +L+ Y +C ++A +F+ + +++VV+W + GYA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 292 GMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
A ++++F M+ D V P++V +V +++A ++L L+ ++AF+ SG + N+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
++L++MY KC++ID A ++F ++ + +++ + Y G EAL +F M + S
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SG 332
Query: 411 LKPNKVTFISILSACSH 427
++P++++ +S +S+CS
Sbjct: 333 VRPDRISMLSAISSCSQ 349
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 119/231 (51%), Gaps = 7/231 (3%)
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN---AVDIF-NR 272
S+L+ C + ++E + H+ G + + + T L+ + + E+ A ++F N
Sbjct: 37 SSLKNCKT---IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
+ L GYA +G+ ++++ +F M++ G+ PD L+A ++
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 333 VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+ +H + K G+ + ++ SL+ YA+C +D+A KVF M+ ++VV W+S+I Y
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
++A+ LF++M ++ PN VT + ++SAC+ +E G ++ + N
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 319/582 (54%), Gaps = 3/582 (0%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
HA + PD+ +S+ LK+C + G +H + K +L ++VGS+L+++Y + G+++
Sbjct: 102 HAVS-PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+ VF E P + V WT+I+TG +G + L +FS M+ EE+S D T A AC
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKAC 219
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
A L K G++IH V G T L +ANSL +Y + G ++ LF M ++DV+SW+
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
S++ Y G A++ F +M + ++ PN T S ACAS S L G ++H +S
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
G +VS ++M MY C + +A +F + +D+++W+ + GGY + G + + F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M G +P AL +L+ + V++ +HA G + N + +SLI MY+KC
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKC 459
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
SI A+ +F D+V +++I Y HG+ +EA+ LF + + +P+ VTFIS+
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISV 518
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
L+AC+H+G ++ G F++M Y + P EHYG MVDLL R G L A +IN M +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Query: 482 GPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRS 541
VW LL AC +I+ G AA+ + LDP A L+NIY N AA +R
Sbjct: 579 DDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638
Query: 542 LIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
+K + K G S +++K+ V +FV+ DRFH +S+ I+ +L
Sbjct: 639 NMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 3/414 (0%)
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-VSPDPVTLVS 116
G + A +VF + P D+V WTSI+ Y + + AL FS M V++ VSPD L
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 117 AASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD 176
AC Q S+ G S+H + + L + + + +SLL++Y + G I + +F EMP ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
++W++++ G L F+EM + T AL+ACA ++ G+ IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
+ GF V+ +L MY +C ++ + +F + ++DVV+W L Y G K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++E F M + V P+ + +A + L L LH V G +++ + S+++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
MY+ C ++ +A+ +F+GM +D++ WS+II Y G GEE K F M S KP
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSGTKPTDF 412
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
S+LS + ++E G + + + + L +S ++++ + G + A
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALC-FGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 3/279 (1%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM--IDKR 207
NS L G++++A +F +MP D++SW+S++ Y + AL LF+ M +D
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+ P+ L L+AC +S + G +H AV V ++L+DMY + + +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+F+ +P ++ V W + G G + + F M D L A + L
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
++ +H V GF + SL MY +C + + +F M+ +DVV W+S+I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
AY GQ +A++ F +M N S + PN+ TF S+ SAC+
Sbjct: 284 AYKRIGQEVKAVETFIKMRN-SQVPPNEQTFASMFSACA 321
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 330/593 (55%), Gaps = 8/593 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A + D+ T +KS G+ LE G+ IH + K D++V ++LI LY K G D
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A +VF E P+ D+V W S+++GY G +L F M PD + +SA AC+
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACS 242
Query: 123 QLSDSKLGRSIHGFVKRCGLDT-HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
+ K+G+ IH R ++T + + S+L++Y K G + AE +F M +++++W+
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 182 SMLACYADNGAATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
M+ CYA NG T+A F +M ++ ++P+ +T ++ L AS + EGR IH A+
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL----PASAILEGRTIHGYAMR 358
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
GF + TAL+DMY +C ++A IF+R+ +K+V++W + Y + G + ++E+
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
F + + PD+ + IL A +E L + +HA++ KS + +N I SL+ MYA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
C +++A K F + KDVV W+SII AY HG G ++ LF +M S + PNK TF S
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI-ASRVNPNKSTFAS 537
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
+L+ACS +G+V+EG F+ M +Y + P EHYG M+DL+GR G A + MP
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 481 AGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLR 540
+WG+LL A H +I + E AA+ +F ++ ++ G Y LL N+Y W + +++
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 541 SLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
L++ + + +S VE K + H F DR H +++I+EVL + + EE
Sbjct: 658 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE 710
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 269/529 (50%), Gaps = 28/529 (5%)
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
M DA+++F E K D LW ++ G+ G A+ F+SRM V V D T
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFTYPFVIK 138
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
+ A +S + G+ IH V + G + + + NSL++LY K G AE +F EMP++D++S
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W+SM++ Y G ++L LF EM+ +P+ + +SAL AC+ + G++IH AV
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 240 SYGFEL-ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
E + V T+++DMY K A IFN + ++++VAW V+ G YA G +
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 299 EVFCNML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
F M +G++PD + + +L A + + +H + + GF + + +LI+M
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
Y +C + +A +F MA K+V+ W+SIIAAY +G+ AL+LF ++ + S L P+ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD-SSLVPDSTT 433
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
SIL A + + + EG I +V K + ++ +V + G+L+ A N++
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFP------LDPNHAGYYTLLSNIYC--- 528
++ W +++ A +H G ++ LF ++PN + + +LL+
Sbjct: 493 LLKDVVS-WNSIIMAYAVH---GFGRISVW-LFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 529 VDKNWHNAAKLRSLIKENRLKKVLGQ--SMVELKNEVHSFVASDRFHDE 575
VD+ W S+ +E + + M++L +F A+ RF +E
Sbjct: 548 VDEGWE---YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEE 593
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 180/385 (46%), Gaps = 27/385 (7%)
Query: 109 PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEIL 168
P + L Q++D L R++ GF D+ L ++ A L
Sbjct: 47 PARLVLRDRYKVTKQVNDPALTRALRGFA-----DSRL---------------MEDALQL 86
Query: 169 FREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYL 228
F EM D W+ M+ + G A+ ++ M+ ++ + T +++ A S L
Sbjct: 87 FDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSL 146
Query: 229 EEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGY 288
EEG+KIH + + GF + V +L+ +Y+K +A +F +P++D+V+W + GY
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
G S+ +F ML G +PD + + L A S + + +H +S + +
Sbjct: 207 LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 349 -YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+ S+++MY+K + A ++F GM +++V W+ +I Y +G+ +A F +M+
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+ L+P+ +T I++L A + + EG TI + + +P ++D+ G G+L
Sbjct: 327 QNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQL 381
Query: 468 DRALDIINNMPMQAGPHVWGALLGA 492
A I + M + W +++ A
Sbjct: 382 KSAEVIFDRMA-EKNVISWNSIIAA 405
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 335/594 (56%), Gaps = 6/594 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M PD + +S L +C L LE G+ IH + + L+ D + + LI+ Y KCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A ++F P +++ WT++++GY+++ + A+ F+ M+ + PD S ++
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTS 359
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA L G +H + + L + NSL+++Y K + A +F DV+ +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 181 SSMLACYADNGAATN---ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
++M+ Y+ G AL++F +M + I P+ +T VS LRA AS + L ++IH L
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS 297
YG L+ +AL+D+Y C +++ +F+ + KD+V W +F GY + ++
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+ +F + RPD ++TA L +Q H + K G + N YI +L++M
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
YAKC S ++A+K F A +DVV W+S+I++Y HG+G++AL++ +M + ++PN +T
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG-IEPNYIT 658
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
F+ +LSACSHAGLVE+G+ F++M+ ++ + P++EHY MV LLGR G L++A ++I M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAA 537
P + VW +LL C N+++ E AA+ DP +G +T+LSNIY W A
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAK 777
Query: 538 KLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMR 591
K+R +K + K G+S + + EVH F++ D+ H +++QI+EVL L V++R
Sbjct: 778 KVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 221/407 (54%), Gaps = 10/407 (2%)
Query: 25 LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTG 84
L ++HG + L+ D ++ + LI LYS+ G M A +VF + P+ ++V W+++V+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 85 YERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR----SIHGFVKRC 140
G E +L F + SP+ L S AC+ L GR + F+ +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKS 177
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLF 200
G D + + L++ Y K G+I A ++F +P+K ++W++M++ G + +L LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 201 NEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC 260
++++ + P+ L + L AC+ +LE G++IH + YG E++ ++ L+D Y+KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 261 SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
A +FN +P K++++W L GY + + ++ME+F +M G++PD A IL
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 321 TAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV 380
T+ + L L +HA+ K+ N+ Y+ SLI+MYAKC + +A KVF A DVV
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 381 IWSSIIAAY---GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+++++I Y G + EAL +F M ++P+ +TF+S+L A
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRA 463
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 5/263 (1%)
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
L+ AS L +H + +G EL+T +S L+++Y + A +F ++P++++
Sbjct: 51 LQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNL 110
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNML-SDGVRPDAVALVKILTAISELGVLQQAVC--L 335
V+W+ + G+ +S+ VF + P+ L + A S L + + L
Sbjct: 111 VSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQL 170
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG 395
+F+ KSGFD + Y+G LI+ Y K +ID A VF + K V W+++I+ G+
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYG 455
+L+LFYQ+ ++ P+ ++LSACS +E G I ++ +Y L D+
Sbjct: 231 YVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMN 288
Query: 456 IMVDLLGRMGELDRALDIINNMP 478
+++D + G + A + N MP
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMP 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+H + G + + Y+ LI +Y++ + A KVF M +++V WS++++A HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG-ITIFDIMVNKYQLMPDSEH 453
EE+L +F + PN+ S + ACS GL G +F + + D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 454 Y--GIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGE 503
Y +++D + G +D A + + +P + W ++ C +KMG
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC-----VKMGR 229
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/603 (35%), Positives = 340/603 (56%), Gaps = 15/603 (2%)
Query: 7 PDSHTVSIA------LKSCVGLQKLEVGRMIHGFLKKENL-DGDMFVGSALIELYSKCGE 59
P+S+ + ++ L VGL+K GR +HG + L D + +G+ L+ +Y+KCG
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
+ DA VF D V W S++TG +++G A+ + M ++ P TL+S+ S
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR-RHDILPGSFTLISSLS 423
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
+CA L +KLG+ IHG + G+D ++S++N+L+ LY +TG + +F MP+ D +S
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 483
Query: 180 WSSMLACYADNGAA-TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W+S++ A + + A+ F + N +T S L A +S S+ E G++IH LA
Sbjct: 484 WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLA 543
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKS 297
+ E T AL+ Y KC + IF+R+ ++D V W + GY + K+
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKA 603
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+++ ML G R D+ +L+A + + L++ + +HA ++ +++ +G++L++M
Sbjct: 604 LDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDM 663
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
Y+KC +D A + F M ++ W+S+I+ Y HGQGEEALKLF M P+ VT
Sbjct: 664 YSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVT 723
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
F+ +LSACSHAGL+EEG F+ M + Y L P EH+ M D+LGR GELD+ D I M
Sbjct: 724 FVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM 783
Query: 478 PMQAGPHVWGALLGACHIHHNIK--MGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHN 535
PM+ +W +LGAC + K +G+ AA+ LF L+P +A Y LL N+Y W +
Sbjct: 784 PMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWED 843
Query: 536 AAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
K R +K+ +KK G S V +K+ VH FVA D+ H ++D I++ L++L+ KMR+ Y
Sbjct: 844 LVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGY 903
Query: 596 EHQ 598
Q
Sbjct: 904 VPQ 906
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 230/499 (46%), Gaps = 40/499 (8%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
++SCVG + R H L K LD D+++ + LI Y + G+ A +VF E P +
Sbjct: 10 VQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL--GRSI 133
V W IV+GY R+G + AL F M V E + + VS AC ++ + GR I
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDM-VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKT-GSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
HG + + ++N L+++Y K GS+ A F ++ K+ +SW+S+++ Y+ G
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY---GFELETTV 249
+A +F+ M P T S + S + + R + Q+ + G + V
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DG 308
+ L+ + K S A +FN++ ++ V L G ++ ++F +M S
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 309 VRPDAVALVKILTAISELGV-----LQQAVCLHAFVTKSGF-DNNEYIGASLIEMYAKCS 362
V P+ + V +L++ E + L++ +H V +G D IG L+ MYAKC
Sbjct: 306 VSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
SI +A +VF M KD V W+S+I +G EA++ + M H D+ P T IS L
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH-DILPGSFTLISSL 422
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI---------MVDLLGRMGELDRALDI 473
S+C+ + G Q+ +S GI ++ L G L+ I
Sbjct: 423 SSCASLKWAKLG----------QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 474 INNMPMQAGPHVWGALLGA 492
++MP + W +++GA
Sbjct: 473 FSSMP-EHDQVSWNSIIGA 490
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ R DS + L + + LE G +H + L+ D+ VGSAL+++YSKCG +
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A+ F P + W S+++GY R G E AL F M + + PD VT V SA
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 121 CAQLSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVI 178
C+ + G + GL + + + ++ G+ G + E +MP K +V+
Sbjct: 731 CSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVL 790
Query: 179 SWSSML-ACYADNG 191
W ++L AC NG
Sbjct: 791 IWRTVLGACCRANG 804
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 333/618 (53%), Gaps = 38/618 (6%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIEL--YSKCGEMNDAVEVFMEYPKP 73
++ CV L++L + HG + + D + S L + S + A +VF E PKP
Sbjct: 37 IERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI 133
+ W +++ Y P L++ F M + P+ T A A++S LG+S+
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA 193
HG + + + + +ANSL++ Y G + SA +F + +KDV+SW+SM+ + G+
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
AL+LF +M + ++ + VT+V L ACA LE GR++ + T++ A+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 254 MDMYLKCSSPENAVDIF-------------------------------NRIPKKDVVAWA 282
+DMY KC S E+A +F N +P+KD+VAW
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 283 VLFGGYAETGMAHKSMEVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
L Y + G ++++ VF + L ++ + + LV L+A +++G L+ +H+++ K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKL 401
G N ++ ++LI MY+KC ++ + +VF + +DV +WS++I HG G EA+ +
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 402 FYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLL 461
FY+M +++KPN VTF ++ ACSH GLV+E ++F M + Y ++P+ +HY +VD+L
Sbjct: 454 FYKM-QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 462 GRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYT 521
GR G L++A+ I MP+ VWGALLGAC IH N+ + E+A L L+P + G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 522 LLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFE 581
LLSNIY W N ++LR ++ LKK G S +E+ +H F++ D H S++++
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 582 VLRKLDVKMREECYEHQL 599
L ++ K++ YE ++
Sbjct: 633 KLHEVMEKLKSNGYEPEI 650
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 219/421 (52%), Gaps = 35/421 (8%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ +T +K+ + L +G+ +HG K + D+FV ++LI Y CG+++ A +V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + DVV W S++ G+ + G+P+ AL F +M E+V VT+V SACA++ +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES-EDVKASHVTMVGVLSACAKIRN 247
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF----------------- 169
+ GR + +++ ++ +L+LAN++L++Y K GSI+ A+ LF
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 170 ----------RE----MPDKDVISWSSMLACYADNGAATNALDLFNEM-IDKRIEPNWVT 214
RE MP KD+++W+++++ Y NG AL +F+E+ + K ++ N +T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
LVS L ACA LE GR IH +G + V++AL+ MY KC E + ++FN +
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
K+DV W+ + GG A G ++++++F M V+P+ V + A S G++ +A
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 335 L-HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAAYGFH 392
L H + G E A ++++ + ++ A K M +W +++ A H
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 393 G 393
Sbjct: 548 A 548
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/656 (31%), Positives = 337/656 (51%), Gaps = 72/656 (10%)
Query: 8 DSHTVSIALKSCVG--LQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
DS + L SC+ L + V R +H + K ++F+ + LI+ YSKCG + D +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV------------- 112
VF + P+ ++ W S+VTG + G + A + F M ++ + + +
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 113 -----------------TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL 155
+ S SAC+ L+D G +H + + + + + ++L+++
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
Y K G++ A+ +F EM D++V+SW+S++ C+ NG A ALD+F M++ R+EP+ VTL
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 216 VSALRACASASYLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
S + ACAS S ++ G+++H V + +S A +DMY KCS + A IF+ +P
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 275 -------------------------------KKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+++VV+W L GY + G +++ +FC
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF------DNNEYIGASLIEM 357
+ + V P + IL A ++L L + H V K GF +++ ++G SLI+M
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
Y KC ++ VFR M +D V W+++I + +G G EAL+LF +M + KP+ +T
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHIT 495
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
I +LSAC HAG VEEG F M + + P +HY MVDLLGR G L+ A +I M
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAA 537
PMQ +WG+LL AC +H NI +G+ A+ L ++P+++G Y LLSN+Y W +
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 538 KLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
+R +++ + K G S ++++ H F+ D+ H QI +L L +MR E
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 157/327 (48%), Gaps = 41/327 (12%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHG-FLKKENLDGDMFVGSALIELYSKCGE 59
+ + PD T++ + +C L ++VG+ +HG +K + L D+ + +A +++Y+KC
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 60 MNDAVEVFMEYP-------------------------------KPDVVLWTSIVTGYERS 88
+ +A +F P + +VV W +++ GY ++
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI------HGFVKRCGL 142
G E AL+ F + E V P + + ACA L++ LG HGF + G
Sbjct: 365 GENEEALSLFCLLK-RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 143 DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNE 202
+ + + NSL+++Y K G ++ ++FR+M ++D +SW++M+ +A NG AL+LF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 203 MIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGFELETTVSTALMDMYLKCS 261
M++ +P+ +T++ L AC A ++EEGR + +G T ++D+ +
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543
Query: 262 SPENAVDIFNRIP-KKDVVAWAVLFGG 287
E A + +P + D V W L
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/598 (34%), Positives = 322/598 (53%), Gaps = 16/598 (2%)
Query: 5 ARPDSHTVSIAL----KSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+P+S T + AL + VG + L+V H + K LD + V ++LI LY KCG +
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQV----HTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A +F + VV W S+++GY +G AL F M L V + S
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR-LNYVRLSESSFASVIKL 304
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVIS 179
CA L + + +H V + G ++ +L+ Y K ++ A LF+E+ +V+S
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W++M++ + N A+DLF+EM K + PN T L A S E +H V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVV 420
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
+E +TV TAL+D Y+K E A +F+ I KD+VAW+ + GYA+TG +++
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGV-LQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
+F + G++P+ IL + + Q H F KS D++ + ++L+ MY
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
AK +I++A +VF+ KD+V W+S+I+ Y HGQ +AL +F +M +K + VTF
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK-VKMDGVTF 599
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
I + +AC+HAGLVEEG FDIMV ++ P EH MVDL R G+L++A+ +I NMP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 479 MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAK 538
AG +W +L AC +H ++G +AA+ + + P + Y LLSN+Y +W AK
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 539 LRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
+R L+ E +KK G S +E+KN+ +SF+A DR H DQI+ L L ++++ YE
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 221/420 (52%), Gaps = 7/420 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D S LK L GR +H K D+ VG++L++ Y K D +VF
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E + +VV WT++++GY R+ + L F RM E P+ T +A A+
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN-EGTQPNSFTFAAALGVLAEEGVG 210
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G +H V + GLD + ++NSL+NLY K G+++ A ILF + K V++W+SM++ Y
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A NG AL +F M + + + S ++ CA+ L ++H V YGF +
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+ TALM Y KC++ +A+ +F I +VV+W + G+ + +++++F M
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GVRP+ ILTA+ + + +HA V K+ ++ + +G +L++ Y K ++
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A KVF G+ KD+V WS+++A Y G+ E A+K+F ++ +KPN+ TF SIL+ C+
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCA 505
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 184/364 (50%), Gaps = 3/364 (0%)
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+A +F + P D + S++ G+ R G + A F + L + D S
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSVLKVS 103
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
A L D GR +H + G +S+ SL++ Y K + K +F EM +++V++W+
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
++++ YA N L LF M ++ +PN T +AL A G ++H + V
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
G + VS +L+++YLKC + A +F++ K VV W + GYA G+ +++ +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
+M + VR + ++ + L L+ LH V K GF ++ I +L+ Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 362 SSIDNANKVFRGMA-YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
+++ +A ++F+ + +VV W+++I+ + + EEA+ LF +M ++PN+ T+
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSV 402
Query: 421 ILSA 424
IL+A
Sbjct: 403 ILTA 406
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 333/588 (56%), Gaps = 6/588 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T+ ++ C L L + R +HG + ++ D D + ++L+ +YSKCG++ + +
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + K + V WT++++ Y R E AL FS M + + P+ VTL S S+C +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 127 SKLGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ G+S+HGF R LD + SL+ +L+ LY + G + E + R + D+++++W+S+++
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
YA G AL LF +M+ +RI+P+ TL S++ AC +A + G++IH +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
E V +L+DMY K S ++A +FN+I + VV W + G+++ G + +++ +F M
Sbjct: 439 EF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+ + V + ++ A S +G L++ +H + SG + + +LI+MYAKC ++
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLN 556
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A VFR M+ + +V WSS+I AYG HG+ A+ F QM S KPN+V F+++LSAC
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNVLSAC 615
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
H+G VEEG F++M + + P+SEH+ +DLL R G+L A I MP A V
Sbjct: 616 GHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV 674
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
WG+L+ C IH + + + +L + + GYYTLLSNIY + W +LRS +K
Sbjct: 675 WGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKS 734
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
+ LKKV G S +E+ +V F A + ++D+I+ L L EE
Sbjct: 735 SNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 245/488 (50%), Gaps = 17/488 (3%)
Query: 16 LKSCVGLQ---KLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK 72
+SC L+ +L ++ G L+++ L + LIE Y+ G + + VF +P
Sbjct: 8 FRSCSSLRLVSQLHAHLLVTGRLRRDPLPV-----TKLIESYAFMGSPDSSRLVFEAFPY 62
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS-KLGR 131
PD ++ ++ + A+ + R+ V E S ACA + +G
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRL-VSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
+HG + + G+D + SLL +YG+TG++ AE +F MP +D+++WS++++ +NG
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
AL +F M+D +EP+ VT++S + CA L R +H F+L+ T+
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
+L+ MY KC ++ IF +I KK+ V+W + Y + K++ F M+ G+ P
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN-EYIGASLIEMYAKCSSIDNANKV 370
+ V L +L++ +G++++ +H F + D N E + +L+E+YA+C + + V
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 371 FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
R ++ +++V W+S+I+ Y G +AL LF QM +KP+ T S +SAC +AGL
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGL 420
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
V G I ++ + D ++D+ + G +D A + N + ++ W ++L
Sbjct: 421 VPLGKQIHGHVIRTD--VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS-VVTWNSML 477
Query: 491 GACHIHHN 498
C N
Sbjct: 478 --CGFSQN 483
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 158/314 (50%), Gaps = 15/314 (4%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD+ T++ ++ +C + +G+ IHG + + ++ D FV ++LI++YSK G ++ A
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSAST 460
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM--AVLEEVSPDPVTLVSAASACAQ 123
VF + VV W S++ G+ ++G A++ F M + LE + VT ++ AC+
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE---MNEVTFLAVIQACSS 517
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ + G+ +H + GL L +L+++Y K G + +AE +FR M + ++SWSSM
Sbjct: 518 IGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSM 576
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ Y +G +A+ FN+M++ +PN V ++ L AC + +EEG+ L S+G
Sbjct: 577 INAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGV 636
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEV-- 300
+ +D+ + + A +P D W L G H+ M++
Sbjct: 637 SPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR----IHQKMDIIK 692
Query: 301 -FCNMLSDGVRPDA 313
N LSD V D
Sbjct: 693 AIKNDLSDIVTDDT 706
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 325/585 (55%), Gaps = 3/585 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS T +K+ L + +GRMIH + K D+ V S+L+ +Y+K ++++V
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P+ DV W ++++ + +SG E AL F RM P+ V+L A SAC++L
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES-SGFEPNSVSLTVAISACSRLLW 223
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ G+ IH + G + + ++L+++YGK ++ A +F++MP K +++W+SM+
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y G + + +++ N MI + P+ TL S L AC+ + L G+ IH + +
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V+ +L+D+Y KC A +F++ K +W V+ Y G K++EV+ M+S
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GV+PD V +L A S+L L++ +H +++S + +E + ++L++MY+KC +
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A ++F + KDVV W+ +I+AYG HGQ EAL F +M LKP+ VT +++LSAC
Sbjct: 464 AFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACG 522
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPHV 485
HAGL++EG+ F M +KY + P EHY M+D+LGR G L A +II P + +
Sbjct: 523 HAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL 582
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
L AC +H +G+ A+ L P+ A Y +L N+Y ++W A ++R +KE
Sbjct: 583 LSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKE 642
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKM 590
L+K G S +E+ ++V F A DR H ++ ++E L L M
Sbjct: 643 MGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 246/466 (52%), Gaps = 6/466 (1%)
Query: 16 LKSCVGLQK-LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYP-KP 73
L+ C K L +++H + L D+ + +LI +Y C + A VF + +
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 69
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI 133
DV +W S+++GY ++ L F R+ PD T + A L LGR I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA 193
H V + G + +A+SL+ +Y K +++ +F EMP++DV SW+++++C+ +G A
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
AL+LF M EPN V+L A+ AC+ +LE G++IH+ V GFEL+ V++AL
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+DMY KC E A ++F ++P+K +VAW + GY G + +E+ M+ +G RP
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
L IL A S L +H +V +S + + Y+ SLI++Y KC + A VF
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF-S 368
Query: 374 MAYKDVV-IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
KDV W+ +I++Y G +A++++ QM + +KP+ VTF S+L ACS +E
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLAALE 427
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+G I + +++ +L D ++D+ + G A I N++P
Sbjct: 428 KGKQI-HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 144/272 (52%), Gaps = 2/272 (0%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
RP T++ L +C + L G+ IHG++ + ++ D++V +LI+LY KCGE N A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
VF + K W +++ Y G A+ + +M + V PD VT S AC+QL
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQL 423
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
+ + G+ IH + L+T L ++LL++Y K G+ K A +F +P KDV+SW+ M+
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGF 243
+ Y +G AL F+EM ++P+ VTL++ L AC A ++EG K Q+ YG
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPK 275
E + ++D+ + A +I + P+
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 354 bits (909), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 344/604 (56%), Gaps = 5/604 (0%)
Query: 1 MHATA-RPDSHTVSIALKSCVGLQKLEVGRMIHG-FLKKENLDGDMFVGSALIELYSKCG 58
MH T P+S+T+ AL +C G ++G+ IH LK +++V +ALI +Y++CG
Sbjct: 275 MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 59 EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA 118
+M A + + DVV W S++ GY ++ + AL FFS M S D V++ S
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSII 393
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
+A +LS+ G +H +V + G D++L + N+L+++Y K F M DKD+I
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
SW++++A YA N AL+LF ++ KR+E + + L S LRA + + ++IH
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI 513
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ G L+T + L+D+Y KC + A +F I KDVV+W + A G +++
Sbjct: 514 LRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAV 572
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
E+F M+ G+ D+VAL+ IL+A + L L + +H ++ + GF I ++++MY
Sbjct: 573 ELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMY 632
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
A C + +A VF + K ++ ++S+I AYG HG G+ A++LF +M H ++ P+ ++F
Sbjct: 633 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM-RHENVSPDHISF 691
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+++L ACSHAGL++EG IM ++Y+L P EHY +VD+LGR + A + + M
Sbjct: 692 LALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Query: 479 MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAK 538
+ VW ALL AC H ++GE+AA+ L L+P + G L+SN++ W++ K
Sbjct: 752 TEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEK 811
Query: 539 LRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQ 598
+R+ +K + ++K G S +E+ +VH F A D+ H ES +I+E L ++ K+ E + +
Sbjct: 812 VRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKRE 871
Query: 599 LKIE 602
L E
Sbjct: 872 LARE 875
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 217/414 (52%), Gaps = 5/414 (1%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDM-FVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
L+ C + + GR +H + K ++ F+ L+ +Y KCG ++DA +VF E P
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIH 134
W +++ Y +G P ALA + M V E V + + ACA+L D + G +H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 135 GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSMLACYADNGAA 193
+ + G + + N+L+++Y K + +A LF +K D + W+S+L+ Y+ +G +
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SYGFELETTVSTA 252
L+LF EM PN T+VSAL AC SY + G++IH + S E V A
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L+ MY +C A I ++ DVV W L GY + M +++E F +M++ G + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
V++ I+ A L L + LHA+V K G+D+N +G +LI+MY+KC+ + F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
M KD++ W+++IA Y + EAL+LF +A ++ +++ SIL A S
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASS 498
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 161/332 (48%), Gaps = 9/332 (2%)
Query: 98 FSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS-LANSLLNLY 156
F R+ V E SP C + GR +H + + L LA L+ +Y
Sbjct: 68 FQRLDVSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMY 126
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
GK GS+ AE +F EMPD+ +W++M+ Y NG +AL L+ M + + +
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
+ L+ACA + G ++H L V G+ + AL+ MY K A +F+ +K
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 277 -DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
D V W + Y+ +G + +++E+F M G P++ +V LTA + +
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 336 HAFVTKSGFDNNE-YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
HA V KS ++E Y+ +LI MY +C + A ++ R M DVV W+S+I Y +
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 395 GEEALKLFYQM--ANHSDLKPNKVTFISILSA 424
+EAL+ F M A H K ++V+ SI++A
Sbjct: 367 YKEALEFFSDMIAAGH---KSDEVSMTSIIAA 395
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 313/565 (55%), Gaps = 4/565 (0%)
Query: 31 IHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSG 89
IH F + NL + LI + GE++ A +VF E P+ V ++ S++ Y R
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
P+ L + +M + E++ PD T AC + G ++ G + +
Sbjct: 96 NPDEVLRLYDQM-IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
+S+LNLY K G + AE+LF +M +DVI W++M+ +A G + A++ + EM ++
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
+ V ++ L+A + GR +H G + V T+L+DMY K E A +
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 270 FNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
F+R+ K V+W L G+A+ G+A+K+ E M S G +PD V LV +L A S++G L
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
+ +H ++ K + +L++MY+KC ++ ++ ++F + KD+V W+++I+ Y
Sbjct: 335 KTGRLVHCYILKRHVLD-RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
G HG G+E + LF +M S+++P+ TF S+LSA SH+GLVE+G F +M+NKY++ P
Sbjct: 394 GIHGNGQEVVSLFLKM-TESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
+HY ++DLL R G ++ ALD+IN+ + +W ALL C H N+ +G++AA +
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKI 512
Query: 510 FPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVAS 569
L+P+ G TL+SN + W AK+R L++ ++KV G S +E+ E+ +F+
Sbjct: 513 LQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLME 572
Query: 570 DRFHDESDQIFEVLRKLDVKMREEC 594
D H E + +VLR L ++R+ C
Sbjct: 573 DLSHHEHYHMLQVLRNLKTEIRDVC 597
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 219/450 (48%), Gaps = 47/450 (10%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PDS T ++ +K+C+ LE G + D+FV S+++ LY KCG+M++A
Sbjct: 113 QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEV 172
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + K DV+ WT++VTG+ ++G A+ F+ M E D V ++ A L
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN-EGFGRDRVVMLGLLQASGDLG 231
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D+K+GRS+HG++ R GL ++ + SL+++Y K G I+ A +F M K +SW S+++
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLIS 291
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+A NG A A + EM +P+ VTLV L AC+ L+ GR +H + L
Sbjct: 292 GFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-L 350
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ +TALMDMY KC + ++ +IF + +KD+V W + Y G + + +F M
Sbjct: 351 DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMT 410
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAF---VTKSGFDNNEYIGASLIEMYAKCS 362
+ PD +L+A+S G+++Q H F + K +E LI++ A+
Sbjct: 411 ESNIEPDHATFASLLSALSHSGLVEQG--QHWFSVMINKYKIQPSEKHYVCLIDLLARA- 467
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
G+ EEAL M N L ++++L
Sbjct: 468 ------------------------------GRVEEAL----DMINSEKLDNALPIWVALL 493
Query: 423 SACSHAGLVEEGITIFDIMVNK-YQLMPDS 451
S C + +++ DI NK QL PDS
Sbjct: 494 SGC----INHRNLSVGDIAANKILQLNPDS 519
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 332/613 (54%), Gaps = 41/613 (6%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIE---LYSKCGEMNDAVEVFMEYPK 72
L +C LQ L R+IH + K L + S LIE L + A+ VF +
Sbjct: 40 LHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P++++W ++ G+ S P AL + M L + P+ T +CA+ K G+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGS------------------------------- 161
IHG V + G D L + SL+++Y + G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 162 IKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
I++A+ LF E+P KDV+SW++M++ YA+ G AL+LF +M+ + P+ T+V+ + A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
CA + +E GR++H +GF + AL+D+Y KC E A +F R+P KDV++W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
L GGY + +++ +F ML G P+ V ++ IL A + LG + +H ++ K
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 342 --SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEAL 399
G N + SLI+MYAKC I+ A++VF + +K + W+++I + HG+ + +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 400 KLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVD 459
LF +M ++P+ +TF+ +LSACSH+G+++ G IF M Y++ P EHYG M+D
Sbjct: 456 DLFSRMRK-IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 460 LLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGY 519
LLG G A ++IN M M+ +W +LL AC +H N+++GE A+NL ++P + G
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
Query: 520 YTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQI 579
Y LLSNIY W+ AK R+L+ + +KKV G S +E+ + VH F+ D+FH + +I
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Query: 580 FEVLRKLDVKMRE 592
+ +L +++V + +
Sbjct: 635 YGMLEEMEVLLEK 647
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 208/430 (48%), Gaps = 46/430 (10%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+S+T LKSC + + G+ IHG + K D D++V ++LI +Y + G + DA +V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVS------------------ 108
F + P DVV +T+++ GY G E A F + V + VS
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 109 ------------PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
PD T+V+ SACAQ +LGR +H ++ G ++L + N+L++LY
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
K G +++A LF +P KDVISW++++ Y AL LF EM+ PN VT++
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 217 SALRACASASYLEEGRKIHQLAVSY--GFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
S L ACA ++ GR IH G +++ T+L+DMY KC E A +FN I
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
K + +W + G+A G A S ++F M G++PD + V +L+A S G+L
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG-- 489
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR--------GMAYKDVVIWSSII 386
H F T + +Y +E Y + + +F+ D VIW S++
Sbjct: 490 RHIFRTMT----QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLL 545
Query: 387 AAYGFHGQGE 396
A HG E
Sbjct: 546 KACKMHGNVE 555
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 129/236 (54%), Gaps = 3/236 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M RPD T+ + +C +E+GR +H ++ ++ + +ALI+LYSKCGE+
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A +F P DV+ W +++ GY + AL F M E +P+ VT++S A
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPA 376
Query: 121 CAQLSDSKLGRSIHGFV-KRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
CA L +GR IH ++ KR G+ SL SL+++Y K G I++A +F + K +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
SW++M+ +A +G A + DLF+ M I+P+ +T V L AC+ + L+ GR I
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 339/598 (56%), Gaps = 12/598 (2%)
Query: 12 VSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYP 71
VSI L+ C + G +H +L K ++ + LI++Y KC E A +VF P
Sbjct: 10 VSI-LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+ +VV W+++++G+ +G + +L+ FS M + + P+ T + AC L+ + G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
IHGF + G + + + NSL+++Y K G I AE +FR + D+ +ISW++M+A + G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 192 AATNALDLFNEMIDKRIE--PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET-- 247
+ ALD F M + I+ P+ TL S L+AC+S + G++IH V GF +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
T++ +L+D+Y+KC +A F++I +K +++W+ L GYA+ G ++M +F +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTK--SGFDNNEYIGASLIEMYAKCSSID 365
+ D+ AL I+ ++ +L+Q + A K SG + + + S+++MY KC +D
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVD 365
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A K F M KDV+ W+ +I YG HG G++++++FY+M H +++P++V ++++LSAC
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH-NIEPDEVCYLAVLSAC 424
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SH+G+++EG +F ++ + + P EHY +VDLLGR G L A +I+ MP++ +
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W LL C +H +I++G+ K L +D + Y ++SN+Y W+ R L
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREEC-YEHQLKIE 602
LKK G S VE++ EVH F + + H + I E L++ + ++REE Y + LK E
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHE 602
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 213/408 (52%), Gaps = 10/408 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T S LK+C L LE G IHGF K + + VG++L+++YSKCG +N+A +V
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 164
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM--AVLEEVSPDPVTLVSAASACAQL 124
F ++ W +++ G+ +G AL F M A ++E PD TL S AC+
Sbjct: 165 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSST 223
Query: 125 SDSKLGRSIHGFVKRCGL--DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
G+ IHGF+ R G + ++ SL++LY K G + SA F ++ +K +ISWSS
Sbjct: 224 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 283
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
++ YA G A+ LF + + + + L S + A + L +G+++ LAV
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 343
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
LET+V +++DMYLKC + A F + KDV++W V+ GY + G+ KS+ +F
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKC 361
ML + PD V + +L+A S G++++ L + + ++ G A ++++ +
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 362 SSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQM 405
+ A + M K +V IW ++++ HG G+E K+ ++
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 4/297 (1%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM 172
LVS C + S G +H ++ + G +L +N L+++Y K A +F M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
P+++V+SWS++++ + NG +L LF+EM + I PN T + L+AC + LE+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
+IH + GFE+ V +L+DMY KC A +F RI + +++W + G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 293 MAHKSMEVFCNMLSDGV--RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF--DNNE 348
K+++ F M + RPD L +L A S G++ +H F+ +SGF ++
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
I SL+++Y KC + +A K F + K ++ WSS+I Y G+ EA+ LF ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 11/283 (3%)
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
LVS LR C ++G ++H + G L S L+DMY KC P A +F+ +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P+++VV+W+ L G+ G S+ +F M G+ P+ L A L L++ +
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
+H F K GF+ +G SL++MY+KC I+ A KVFR + + ++ W+++IA + G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 394 QGEEALKLF--YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
G +AL F Q AN + +P++ T S+L ACS G++ G I +V P S
Sbjct: 188 YGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 452 EHY-GIMVDLLGRMGEL---DRALDIINNMPMQAGPHVWGALL 490
G +VDL + G L +A D I M + W +L+
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS----WSSLI 285
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 5/284 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENL--DGDMFVGSALIELYSKCGEMNDA 63
RPD T++ LK+C + G+ IHGFL + + +L++LY KCG + A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+ F + + ++ W+S++ GY + G A+ F R+ L D L S A
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFAD 325
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ + G+ + + S+ NS++++Y K G + AE F EM KDVISW+ +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI-HQLAVSYG 242
+ Y +G ++ +F EM+ IEP+ V ++ L AC+ + ++EG ++ +L ++G
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
+ ++D+ + + A + + +P K +V W L
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 313/589 (53%), Gaps = 6/589 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T + L +C LE+G H + K+ L ++FVG+AL+++Y+KCG + DA ++F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
D V W +I+ Y + A F RM + VS D L S AC +
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS-DGACLASTLKACTHVHGL 545
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G+ +H +CGLD L +SL+++Y K G IK A +F +P+ V+S ++++A Y
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+ N A+ LF EM+ + + P+ +T + + AC L G + H GF E
Sbjct: 606 SQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 248 T-VSTALMDMYLKCSSPENAVDIFNRIPK-KDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ +L+ MY+ A +F+ + K +V W + G+++ G ++++ + M
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
DGV PD V +L S L L++ +H+ + D +E +LI+MYAKC +
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 366 NANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+++VF M + +VV W+S+I Y +G E+ALK+F M S + P+++TF+ +L+A
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQSHIMPDEITFLGVLTA 843
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
CSHAG V +G IF++M+ +Y + +H MVDLLGR G L A D I ++
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+W +LLGAC IH + GE++A+ L L+P ++ Y LLSNIY W A LR +++
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
+ +KKV G S ++++ H F A D+ H E +I L L M+++
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDD 1012
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 247/478 (51%), Gaps = 11/478 (2%)
Query: 18 SCVGL-QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVV 76
S +G+ L++G ++H K L +++VGS+L+ +YSKC +M A +VF + + V
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 77 LWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF 136
W +++ GY +G + F M + D T S S CA D ++G H
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 137 VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNA 196
+ + L +L + N+L+++Y K G+++ A +F M D+D ++W++++ Y + + A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
DLF M I + L S L+AC L +G+++H L+V G + + ++L+DM
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 257 YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL 316
Y KC ++A +F+ +P+ VV+ L GY++ + +++ +F ML+ GV P +
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDN-NEYIGASLIEMYAKCSSIDNANKVFRGMA 375
I+ A + L H +TK GF + EY+G SL+ MY + A +F ++
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 376 Y-KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
K +V+W+ +++ + +G EEALK FY+ H + P++ TF+++L CS + EG
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALK-FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 435 ITIFDIMVNKYQLMPDSEHY--GIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
I ++ + L D + ++D+ + G++ + + + M ++ W +L+
Sbjct: 752 RAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 223/472 (47%), Gaps = 38/472 (8%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T SI L +C +E GR IH + K L+ + + G AL+++Y+KC ++DA V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P+ V WT + +GY ++G PE A+ F RM E PD + V+
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD-EGHRPDHLAFVT---------- 266
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
++N Y + G +K A +LF EM DV++W+ M++
Sbjct: 267 -------------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ G T A++ F M ++ TL S L A + L+ G +H A+ G
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V ++L+ MY KC E A +F + +K+ V W + GYA G +HK ME+F +M S
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G D +L+ + L+ H+ + K N ++G +L++MYAKC ++++
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A ++F M +D V W++II +Y EA LF +M N + + S L AC+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLASTLKACT 540
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
H + +G + + V K L D ++D+ + G + A + +++P
Sbjct: 541 HVHGLYQGKQVHCLSV-KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 224/469 (47%), Gaps = 42/469 (8%)
Query: 25 LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTG 84
L +G+ +H +D + +G+A+++LY+KC +++ A + F ++ + DV W S+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSM 134
Query: 85 YERSGTPELALAFFSRMAVLE-EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLD 143
Y G P L F +++ E ++ P+ T S CA+ ++ + GR IH + + GL+
Sbjct: 135 YSSIGKPGKVLRSF--VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 144 THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM 203
+ +L+++Y K I A +F + D + + W+ + + Y G A+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
D+ P+ + V+ +++ Y++
Sbjct: 253 RDEGHRPDHLAFVT-----------------------------------VINTYIRLGKL 277
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
++A +F + DVVAW V+ G+ + G ++E F NM V+ L +L+AI
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
+ L + +HA K G +N Y+G+SL+ MY+KC ++ A KVF + K+ V W+
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
++I Y +G+ + ++LF M + S + TF S+LS C+ + +E G I++
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
K +L + +VD+ + G L+ A I M + W ++G+
Sbjct: 457 K-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%), Gaps = 6/285 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGD-MFVGSALIELYSKCGEMNDAVE 65
P T + +++C + L +G HG + K + ++G +L+ +Y M +A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 66 VFMEYPKP-DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F E P +VLWT +++G+ ++G E AL F+ M + V PD T V+ C+ L
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCSVL 745
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSM 183
S + GR+IH + D +N+L+++Y K G +K + +F EM + +V+SW+S+
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SYG 242
+ YA NG A +AL +F+ M I P+ +T + L AC+ A + +GRKI ++ + YG
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFN-RIPKKDVVAWAVLFG 286
E ++D+ + + A D + K D W+ L G
Sbjct: 866 IEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 143/303 (47%), Gaps = 18/303 (5%)
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
L G+ +H ++ G + E + A++D+Y KC+ A F+ + +KDV AW +
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
Y+ G K + F ++ + + P+ +L+ + ++ +H + K G + N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
Y G +L++MYAKC I +A +VF + + V W+ + + Y G EEA+ +F +M +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+P+ + F+++++ G +++ +F M + PD + +M+ G+ G
Sbjct: 255 EGH-RPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCE 308
Query: 468 DRALDIINNM---PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLS 524
A++ NM +++ G++L A I N+ +G V L L S
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LAS 360
Query: 525 NIY 527
NIY
Sbjct: 361 NIY 363
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
H PD T L+ C L L GR IH + D D + LI++Y+KCG+M
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 62 DAVEVFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ +VF E + +VV W S++ GY ++G E AL F M + PD +T + +A
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEITFLGVLTA 843
Query: 121 CAQLSDSKLGRSI-HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVI 178
C+ GR I + + G++ + +++L G+ G ++ A+ K D
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 179 SWSSML-AC 186
WSS+L AC
Sbjct: 904 LWSSLLGAC 912
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 322/582 (55%), Gaps = 31/582 (5%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L C L ++ + +H + + NL D+ + LI S C + N AV VF + +P+V
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
L S++ + ++ P A FS M + D T AC+ S + + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA-DNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGS--IKSAEILFREMPDKDVISWSSMLACYADNGAA 193
+++ GL + + + N+L++ Y + G ++ A LF +M ++D +SW+SML G
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL------ET 247
+A LF+EM +R +W T++ C +S FEL
Sbjct: 202 RDARRLFDEM-PQRDLISWNTMLDGYARCRE--------------MSKAFELFEKMPERN 246
Query: 248 TVSTALMDM-YLKCSSPENAVDIFNR--IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
TVS + M M Y K E A +F++ +P K+VV W ++ GYAE G+ ++ + M
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
++ G++ DA A++ IL A +E G+L + +H+ + +S +N Y+ +L++MYAKC ++
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
A VF + KD+V W++++ G HG G+EA++LF +M ++P+KVTFI++L +
Sbjct: 367 KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM-RREGIRPDKVTFIAVLCS 425
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
C+HAGL++EGI F M Y L+P EHYG +VDLLGR+G L A+ ++ MPM+
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+WGALLGAC +H+ + + + NL LDP G Y+LLSNIY ++W A +RS +K
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKL 586
++K G S VEL++ +H F D+ H +SDQI+++L L
Sbjct: 546 SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 220/427 (51%), Gaps = 19/427 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM--NDAVE 65
D+ T LK+C G L V +M+H ++K L D++V +ALI+ YS+CG + DA++
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + + D V W S++ G ++G A F M + +S + T++ + C ++S
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN--TMLDGYARCREMS 233
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM--PDKDVISWSSM 183
++ F K +T +S + ++ Y K G ++ A ++F +M P K+V++W+ +
Sbjct: 234 -----KAFELFEKMPERNT-VSWSTMVMG-YSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+A YA+ G A L ++M+ ++ + ++S L AC + L G +IH +
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNL 346
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
V AL+DMY KC + + A D+FN IPKKD+V+W + G G +++E+F
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD---NNEYIGASLIEMYAK 360
M +G+RPD V + +L + + G++ + + + + + +D E+ G L+++ +
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGC-LVDLLGR 464
Query: 361 CSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+ A KV + M + +VVIW +++ A H + + A ++ + P + +
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 524
Query: 420 SILSACS 426
S + A +
Sbjct: 525 SNIYAAA 531
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 326/597 (54%), Gaps = 13/597 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKE-NLDGDMFVGSALIELYSKCGE--MNDA 63
P+ + + +++C + VGR+ GFL K + + D+ VG +LI+++ K GE +A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENA 222
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+VF + + +VV WT ++T + G P A+ FF M VL D TL S SACA+
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKFTLSSVFSACAE 281
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKT---GSIKSAEILFREMPDKDVISW 180
L + LG+ +H + R GL + SL+++Y K GS+ +F M D V+SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 181 SSMLACYADN-GAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
++++ Y N AT A++LF+EMI + +EPN T SA +AC + S G+++ A
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
G ++V+ +++ M++K E+A F + +K++V++ G ++
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
++ + + A +L+ ++ +G +++ +H+ V K G N+ + +LI MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+KC SID A++VF M ++V+ W+S+I + HG L+ F QM +KPN+VT+
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG-VKPNEVTY 578
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
++ILSACSH GLV EG F+ M +++ P EHY MVDLL R G L A + IN MP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 479 MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAK 538
QA VW LGAC +H N ++G++AA+ + LDPN Y LSNIY W + +
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 539 LRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+R +KE L K G S +E+ +++H F D H + QI++ L +L +++ Y
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 176/327 (53%), Gaps = 11/327 (3%)
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
D VT S +C + D +LG+ +H + ++ L NSL++LY K+G AE +F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 170 ---REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASAS 226
R +DV+SWS+M+ACY +NG +A+ +F E ++ + PN + +RAC+++
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 227 YLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKC-SSPENAVDIFNRIPKKDVVAWAVL 284
++ GR + G FE + V +L+DM++K +S ENA +F+++ + +VV W ++
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
+ G +++ F +M+ G D L + +A +EL L LH++ +SG
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 345 DNNEYIGASLIEMYAKCS---SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ-GEEALK 400
++ + SL++MYAKCS S+D+ KVF M V+ W+++I Y + EA+
Sbjct: 301 VDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 401 LFYQMANHSDLKPNKVTFISILSACSH 427
LF +M ++PN TF S AC +
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 238/485 (49%), Gaps = 20/485 (4%)
Query: 6 RP-DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
RP DS T S LKSC+ + +G+++H L + +++ D + ++LI LYSK G+ A
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 65 EVF---MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+VF + K DVV W++++ Y +G A+ F L V P+ + AC
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRAC 176
Query: 122 AQLSDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGK-TGSIKSAEILFREMPDKDVIS 179
+ +GR GF+ + G ++ + + SL++++ K S ++A +F +M + +V++
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W+ M+ G A+ F +M+ E + TL S ACA L G+++H A+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 240 SYGFELETTVSTALMDMYLKCS---SPENAVDIFNRIPKKDVVAWAVLFGGYAET-GMAH 295
G L V +L+DMY KCS S ++ +F+R+ V++W L GY + +A
Sbjct: 297 RSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 296 KSMEVFCNMLSDG-VRPDAVALVKILTAISELG--VLQQAVCLHAFVTKSGFDNNEYIGA 352
+++ +F M++ G V P+ A L + + V AF K G +N +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF--KRGLASNSSVAN 412
Query: 353 SLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
S+I M+ K +++A + F ++ K++V +++ + + E+A KL ++ +L
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER-ELG 471
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
+ TF S+LS ++ G + +G I +V K L + ++ + + G +D A
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 473 IINNM 477
+ N M
Sbjct: 531 VFNFM 535
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 305/567 (53%), Gaps = 35/567 (6%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERS 88
R +H + E+L + +G L+ Y+ ++ A +VF E P+ +V++ ++ Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSL 148
G + F M V PD T AC+ +GR IHG + GL + L +
Sbjct: 119 GFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
N L+++YGK G + A ++ EM +DV+SW+S++ YA N +AL++ EM +I
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+ T+ S L A ++ TT MY+K D
Sbjct: 238 SHDAGTMASLLPAVSN----------------------TTTENV---MYVK--------D 264
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F ++ KK +V+W V+ G Y + M +++E++ M +DG PDAV++ +L A +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L +H ++ + N + +LI+MYAKC ++ A VF M +DVV W+++I+A
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
YGF G+G +A+ LF ++ + S L P+ + F++ L+ACSHAGL+EEG + F +M + Y++
Sbjct: 385 YGFSGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
P EH MVDLLGR G++ A I +M M+ VWGALLGAC +H + +G +AA
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
LF L P +GYY LLSNIY W +R+++K LKK G S VE+ +H+F+
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 569 SDRFHDESDQIFEVLRKLDVKMREECY 595
DR H +SD+I+ L L KM+E Y
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGY 590
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 196/446 (43%), Gaps = 48/446 (10%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD +T LK+C + +GR IHG K L +FVG+ L+ +Y KCG +++A
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
V E + DVV W S+V GY ++ + AL M + ++S D T+ S A + +
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV-KISHDAGTMASLLPAVSNTT 255
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
T ++ + +F +M K ++SW+ M+
Sbjct: 256 ---------------------------------TENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y N A++L++ M EP+ V++ S L AC S L G+KIH
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ AL+DMY KC E A D+F + +DVV+W + Y +G ++ +F +
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 306 SDGVRPDAVALVKILTAISELGVLQQA-VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
G+ PD++A V L A S G+L++ C A ++++ + +
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 365 DNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEAL----KLFYQMANHSDLKPNKVTFI 419
A + + M+ + + +W +++ A H + L KLF L P + +
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF-------QLAPEQSGYY 515
Query: 420 SILSAC-SHAGLVEEGITIFDIMVNK 444
+LS + AG EE I +IM +K
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSK 541
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 330/588 (56%), Gaps = 5/588 (0%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D ++ S LK +++ ++G +HG + K + +++VGS+L+++Y+KC + DA E F
Sbjct: 100 DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAF 159
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E +P+ V W +++ G+ + + A M + V+ D T +
Sbjct: 160 KEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFC 219
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSMLAC 186
L + +H V + GL +++ N++++ Y GS+ A+ +F + KD+ISW+SM+A
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
++ + +A +LF +M +E + T L AC+ + G+ +H + + G E
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQV 339
Query: 247 TTVSTALMDMYLK--CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
T+ + AL+ MY++ + E+A+ +F + KD+++W + G+A+ G++ +++ F +
Sbjct: 340 TSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
S ++ D A +L + S+L LQ +HA TKSGF +NE++ +SLI MY+KC I
Sbjct: 400 RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGII 459
Query: 365 DNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
++A K F+ ++ K V W+++I Y HG G+ +L LF QM N ++K + VTF +IL+
Sbjct: 460 ESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQ-NVKLDHVTFTAILT 518
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
ACSH GL++EG+ + ++M Y++ P EHY VDLLGR G +++A ++I +MP+ P
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
V LG C I+M A +L ++P Y LS++Y K W A ++ ++
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMR 591
KE +KKV G S +E++N+V +F A DR + I+ +++ L +M+
Sbjct: 639 KERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 149/295 (50%), Gaps = 3/295 (1%)
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA 193
H + +CG + + ++N +L+ Y K G + A +LF EMP +D +SW++M++ Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
+A LF M + + + L+ AS + G ++H L + G+E V ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM-LSDGVRPD 312
+DMY KC E+A + F I + + V+W L G+ + + + M + V D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
A +LT + + +HA V K G + I ++I YA C S+ +A +VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 373 GM-AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
G+ KD++ W+S+IA + H E A +LF QM H ++ + T+ +LSACS
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLLSACS 316
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 195/422 (46%), Gaps = 13/422 (3%)
Query: 22 LQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSI 81
QKL + H + K D++V + +++ Y K G + A +F E PK D V W ++
Sbjct: 16 FQKLS---LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTM 72
Query: 82 VTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCG 141
++GY G E A F+ M D + A + LG +HG V + G
Sbjct: 73 ISGYTSCGKLEDAWCLFTCMK-RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 142 LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFN 201
+ ++ + +SL+++Y K ++ A F+E+ + + +SW++++A + A L
Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLG 191
Query: 202 EM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC 260
M + + + T L + +++H + G + E T+ A++ Y C
Sbjct: 192 LMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADC 251
Query: 261 SSPENAVDIFNRI-PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
S +A +F+ + KD+++W + G+++ + + E+F M V D +
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGL 311
Query: 320 LTAIS--ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK--CSSIDNANKVFRGMA 375
L+A S E + ++ LH V K G + +LI MY + ++++A +F +
Sbjct: 312 LSACSGEEHQIFGKS--LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGI 435
KD++ W+SII + G E+A+K F+ S++K + F ++L +CS ++ G
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVK-FFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 436 TI 437
I
Sbjct: 429 QI 430
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 315/598 (52%), Gaps = 3/598 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +K+C + +G+ +H + K + +ALI +Y + +M+DA V
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P D++ W+SI+ G+ + G AL+ M P+ S+ AC+ L
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G IHG + L + SL ++Y + G + SA +F ++ D SW+ ++A
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
A+NG A A+ +F++M P+ ++L S L A L +G +IH + +GF +
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD 405
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKK-DVVAWAVLFGGYAETGMAHKSMEVFCNML 305
TV +L+ MY CS ++F D V+W + + + + +F ML
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML 465
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
PD + + +L E+ L+ +H + K+G ++I LI+MYAKC S+
Sbjct: 466 VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A ++F M +DVV WS++I Y G GEEAL LF +M + + ++PN VTF+ +L+AC
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS-AGIEPNHVTFVGVLTAC 584
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SH GLVEEG+ ++ M ++ + P EH +VDLL R G L+ A I+ M ++ V
Sbjct: 585 SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVV 644
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W LL AC N+ + + AA+N+ +DP ++ + LL +++ NW NAA LRS +K+
Sbjct: 645 WKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKK 704
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY-EHQLKIE 602
+ +KK+ GQS +E+++++H F A D FH E D I+ VL + +M +EC +H+ +++
Sbjct: 705 HDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQ 762
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 237/464 (51%), Gaps = 9/464 (1%)
Query: 18 SCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVL 77
+C + L GR IH + N D + + ++ +Y KCG + DA EVF P+ ++V
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 78 WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
+TS++TGY ++G A+ + +M + E++ PD S ACA SD LG+ +H V
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNAL 197
+ +HL N+L+ +Y + + A +F +P KD+ISWSS++A ++ G AL
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 198 DLFNEMIDKRI-EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
EM+ + PN S+L+AC+S + G +IH L + +L DM
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 257 YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL 316
Y +C +A +F++I + D +W V+ G A G A +++ VF M S G PDA++L
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID---NANKVFRG 373
+L A ++ L Q + +H+++ K GF + + SL+ MY CS + N + FR
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
A D V W++I+ A H Q E L+LF M S+ +P+ +T ++L C ++
Sbjct: 435 NA--DSVSWNTILTACLQHEQPVEMLRLFKLMLV-SECEPDHITMGNLLRGCVEISSLKL 491
Query: 434 GITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
G + + K L P+ ++D+ + G L +A I ++M
Sbjct: 492 GSQVHCYSL-KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 227/485 (46%), Gaps = 23/485 (4%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFV--KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFR 170
T +S AC+ GR IH + C DT L+ N +L++YGK GS++ A +F
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN--NHILSMYGKCGSLRDAREVFD 126
Query: 171 EMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
MP+++++S++S++ Y+ NG A+ L+ +M+ + + P+ S ++ACAS+S +
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
G+++H + AL+ MY++ + +A +F IP KD+++W+ + G+++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 291 TGMAHKSMEVFCNMLSDGV-RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
G +++ MLS GV P+ L A S L +H KS N
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
G SL +MYA+C +++A +VF + D W+ IIA +G +EA+ +F QM + S
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS-S 365
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
P+ ++ S+L A + + +G+ I ++ K+ + D ++ + +L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 470 ALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPL------DPNHAGYYTLL 523
++ + A W +L AC H V LF L +P+H LL
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQ----PVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 524 SNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
CV+ ++ KL S + LK L +KN + A ++ +IF+ +
Sbjct: 481 RG--CVEI---SSLKLGSQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 584 RKLDV 588
DV
Sbjct: 535 DNRDV 539
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 318/590 (53%), Gaps = 2/590 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+++T++ K+ LQ VGR H + K + GD++V ++L+ +Y K G + D ++V
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSR-MAVLEEVSPDPVTLVSAASACAQLS 125
F P+ + W+++V+GY G E A+ F+ + EE S + S+ A
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
LGR IH + GL ++L+N+L+ +Y K S+ A +F D++ I+WS+M+
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y+ NG + A+ LF+ M I+P+ T+V L AC+ YLEEG+++H + GFE
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+TAL+DMY K +A F+ + ++DV W L GY + +++ ++ M
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+ G+ P+ + +L A S L L+ +H K GF IG++L MY+KC S++
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+ N VFR KDVV W+++I+ +GQG+EAL+LF +M ++P+ VTF++I+SAC
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG-MEPDDVTFVNIISAC 534
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SH G VE G F++M ++ L P +HY MVDLL R G+L A + I + + G +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W LL AC H ++G A + L L + Y LS IY + ++ ++
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
N + K +G S +ELKN+ H FV D H ++ +++ + +M EE +
Sbjct: 655 NGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGF 704
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 220/418 (52%), Gaps = 9/418 (2%)
Query: 23 QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIV 82
+ L GR +HG + + + + L+ Y+KCG++ A +F DVV W S++
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 83 TGYERSG---TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKR 139
TGY ++G + + F M +++ P+ TL A + L S +GR H V +
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRA-QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 140 CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDL 199
+ + SL+ +Y K G ++ +F MP+++ +WS+M++ YA G A+ +
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 200 FNEMIDKRIE---PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
FN + ++ E ++V + L + A+ Y+ GR+IH + + G +S AL+ M
Sbjct: 207 FNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 257 YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL 316
Y KC S A +F+ ++ + W+ + GY++ G + +++++F M S G++P +
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY 376
V +L A S++ L++ LH+F+ K GF+ + + +L++MYAK + +A K F +
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 377 KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
+DV +W+S+I+ Y + EEAL L+ +M + + PN T S+L ACS +E G
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSSLATLELG 442
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 180/337 (53%), Gaps = 12/337 (3%)
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
E++P TL+ + +Q + GR++HG + R G T + AN L+N Y K G + A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 166 EILFREMPDKDVISWSSMLACYADNGAATNA---LDLFNEMIDKRIEPNWVTLVSALRAC 222
+F + KDV+SW+S++ Y+ NG +++ + LF EM + I PN TL +A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWA 282
+S GR+ H L V + V T+L+ MY K E+ + +F +P+++ W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 283 VLFGGYAETGMAHKSMEVFCNML---SDGVRPDAV--ALVKILTAISELGVLQQAVCLHA 337
+ GYA G ++++VF L +G D V A++ L A +G+ +Q +H
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ---IHC 245
Query: 338 FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEE 397
K+G + +L+ MY+KC S++ A K+F ++ + WS+++ Y +G+ E
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
A+KLF +M + + +KP++ T + +L+ACS +EEG
Sbjct: 306 AVKLFSRMFS-AGIKPSEYTIVGVLNACSDICYLEEG 341
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 134/229 (58%), Gaps = 1/229 (0%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A +P +T+ L +C + LE G+ +H FL K + +F +AL+++Y+K G + D
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A + F + DV LWTS+++GY ++ E AL + RM + DP T+ S AC+
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP-TMASVLKACS 434
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
L+ +LG+ +HG + G + + ++L +Y K GS++ ++FR P+KDV+SW++
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
M++ + NG AL+LF EM+ + +EP+ VT V+ + AC+ ++E G
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/594 (30%), Positives = 330/594 (55%), Gaps = 16/594 (2%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D+ T S AL CVG + +G + + K L+ D+ VG++ I +YS+ G A VF
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E D++ W S+++G + GT R + E V D V+ S + C +D
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
KL R IHG + G ++ L + N L++ Y K G +++ + +F +M +++V+SW++M++
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
D+ A+ +F M + PN VT V + A ++EG KIH L + GF E
Sbjct: 353 KDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
+V + + +Y K + E+A F I +++++W + G+A+ G +H+++++F + ++
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE 467
Query: 308 GVRPDAVALVKILTAIS---ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+ P+ +L AI+ ++ V Q C HA + K G ++ + ++L++MYAK +I
Sbjct: 468 TM-PNEYTFGSVLNAIAFAEDISVKQGQRC-HAHLLKLGLNSCPVVSSALLDMYAKRGNI 525
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
D + KVF M+ K+ +W+SII+AY HG E + LF++M ++ P+ VTF+S+L+A
Sbjct: 526 DESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE-NVAPDLVTFLSVLTA 584
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
C+ G+V++G IF++M+ Y L P EHY MVD+LGR G L A ++++ +P G
Sbjct: 585 CNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGES 644
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+ ++LG+C +H N+KMG A+ + P +G Y + NIY + W AA++R ++
Sbjct: 645 MLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMR 704
Query: 545 ENRLKKVLGQSMVELKN-----EVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
+ + K G S +++ + + F + D+ H +SD+I+ ++ + ++M E
Sbjct: 705 KKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLE 758
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 260/500 (52%), Gaps = 26/500 (5%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T+ +ALK+C G L+ G IHGF + V +A++ +Y K G ++A+ +F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
PDVV W +I++G++ + ++AL F RM V D T +A S C
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKS-AGVVFDAFTYSTALSFCVGSEGF 190
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
LG + V + GL++ L + NS + +Y ++GS + A +F EM KD+ISW+S+L+
Sbjct: 191 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 188 ADNGA-ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ G A+ +F +M+ + +E + V+ S + C + L+ R+IH L + G+E
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 310
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V LM Y KC E +F+++ +++VV+W + + ++ +F NM
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVS-----IFLNMRF 365
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
DGV P+ V V ++ A+ +++ + +H K+GF + +G S I +YAK ++++
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A K F + +++++ W+++I+ + +G EALK+F A ++ PN+ TF S+L+A +
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA--AETMPNEYTFGSVLNAIA 483
Query: 427 HAG--LVEEGIT----IFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
A V++G + + +N ++ + ++D+ + G +D + + N M Q
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVSSA-----LLDMYAKRGNIDESEKVFNEMS-Q 537
Query: 481 AGPHVWGALLGACHIHHNIK 500
VW +++ A H + +
Sbjct: 538 KNQFVWTSIISAYSSHGDFE 557
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 173/354 (48%), Gaps = 14/354 (3%)
Query: 87 RSGTPELALAFFSRMAVLEEVSP--DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDT 144
R +P AL+ F L D VTL A AC D K G IHGF G +
Sbjct: 52 RRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTS 109
Query: 145 HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
+ ++N+++ +Y K G +A +F + D DV+SW+++L+ + DN AL+ M
Sbjct: 110 FVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMK 166
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
+ + T +AL C + G ++ V G E + V + + MY + S
Sbjct: 167 SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETG-MAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
A +F+ + KD+++W L G ++ G +++ +F +M+ +GV D V+ ++T
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
L+ A +H K G+++ +G L+ Y+KC ++ VF M+ ++VV W+
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
++I++ ++A+ +F M + PN+VTF+ +++A ++EG+ I
Sbjct: 347 TMISS-----NKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 305/547 (55%), Gaps = 12/547 (2%)
Query: 59 EMNDAVEVFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
E + +F Y K DV W S++ RSG AL FS M L + P + A
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCA 82
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
AC+ L D G+ H G + + ++++L+ +Y G ++ A +F E+P +++
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 178 ISWSSMLACYADNGAATNALDLFNEMI------DKRIEPNWVTLVSALRACASASYLEEG 231
+SW+SM+ Y NG A +A+ LF +++ D + + + LVS + AC+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 232 RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV--DIFNRIPKKDVVAWAVLFGGYA 289
IH + GF+ +V L+D Y K AV IF++I KD V++ + YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 290 ETGMAHKSMEVFCNMLSDGVRP-DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
++GM++++ EVF ++ + V +A+ L +L A+S G L+ C+H V + G +++
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+G S+I+MY KC ++ A K F M K+V W+++IA YG HG +AL+LF M +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID- 381
Query: 409 SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD 468
S ++PN +TF+S+L+ACSHAGL EG F+ M ++ + P EHYG MVDLLGR G L
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 469 RALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYC 528
+A D+I M M+ +W +LL AC IH N+++ E++ LF LD ++ GYY LLS+IY
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 529 VDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDV 588
W + ++R ++K L K G S++EL EVH F+ D H + ++I+E L +L+
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 589 KMREECY 595
K+ E Y
Sbjct: 562 KLLEAGY 568
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 217/403 (53%), Gaps = 12/403 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + A+K+C L + G+ H D+FV SALI +YS CG++ DA +V
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKV 133
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-----VSPDPVTLVSAASAC 121
F E PK ++V WTS++ GY+ +G A++ F + V E + D + LVS SAC
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC 193
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK--TGSIKSAEILFREMPDKDVIS 179
+++ L SIH FV + G D +S+ N+LL+ Y K G + A +F ++ DKD +S
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 180 WSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
++S+++ YA +G + A ++F ++ +K + N +TL + L A + + L G+ IH
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ G E + V T+++DMY KC E A F+R+ K+V +W + GY G A K++
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGV-LQQAVCLHAFVTKSGFDNN-EYIGASLIE 356
E+F M+ GVRP+ + V +L A S G+ ++ +A + G + E+ G +++
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC-MVD 432
Query: 357 MYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEA 398
+ + + A + + M K D +IWSS++AA H E A
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 312/587 (53%), Gaps = 4/587 (0%)
Query: 9 SHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFM 68
S + + AL +C + GR IH + K L D +V ++L+ +YSKCG + +A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 69 EYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
+ +W ++V Y + AL F M + V PD TL + S C+ L
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYN 390
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYA 188
G+S+H + + + + ++ ++LL LY K G A ++F+ M +KD+++W S+++
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 189 DNGAATNALDLFNEMIDK--RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
NG AL +F +M D ++P+ + S ACA L G ++H + G L
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V ++L+D+Y KC PE A+ +F + +++VAW + Y+ + S+++F MLS
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G+ PD+V++ +L AIS L + LH + + G ++ ++ +LI+MY KC
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A +F+ M +K ++ W+ +I YG HG AL LF +M + P+ VTF+S++SAC+
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACN 689
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H+G VEEG IF+ M Y + P+ EHY MVDLLGR G L+ A I MP++A +W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
LL A HHN+++G ++A+ L ++P Y L N+Y + AAKL L+KE
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
L K G S +E+ + + F + +IF VL +L M +E
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 251/477 (52%), Gaps = 8/477 (1%)
Query: 6 RPDSHTVSIALKSCV--GLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
RPD+ ++SI + G + E G+ IHGF+ + +LD D F+ +ALI++Y K G DA
Sbjct: 165 RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDA 224
Query: 64 VEVFMEYP-KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
VF+E K +VVLW ++ G+ SG E +L + +A V + A AC+
Sbjct: 225 WRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACS 283
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
Q +S GR IH V + GL + SLL++Y K G + AE +F + DK + W++
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
M+A YA+N +ALDLF M K + P+ TL + + C+ G+ +H
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
+ +T+ +AL+ +Y KC +A +F + +KD+VAW L G + G ++++VF
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 303 NML--SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
+M D ++PD+ + + A + L L+ + +H + K+G N ++G+SLI++Y+K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
C + A KVF M+ +++V W+S+I+ Y + E ++ LF M + + P+ V+ S
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITS 582
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+L A S + +G ++ + + + D+ ++D+ + G A +I M
Sbjct: 583 VLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 246/495 (49%), Gaps = 15/495 (3%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKP-- 73
LK+C L L G+ IHG + D F+ ++L+ +Y KCG ++ AV+VF + +
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 74 -----DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
DV +W S++ GY + + + F RM V V PD +L S + + +
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGNFR 185
Query: 129 L--GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSMLA 185
G+ IHGF+ R LDT L +L+++Y K G A +F E+ DK +V+ W+ M+
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ +G ++LDL+ + ++ + AL AC+ + GR+IH V G
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ V T+L+ MY KC A +F+ + K + W + YAE + ++++F M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
V PD+ L +++ S LG+ +HA + K + I ++L+ +Y+KC
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD-LKPNKVTFISILSA 424
+A VF+ M KD+V W S+I+ +G+ +EALK+F M + D LKP+ S+ +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
C+ + G+ + M+ K L+ + ++DL + G + AL + +M +
Sbjct: 486 CAGLEALRFGLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMV 543
Query: 485 VWGALLGACHIHHNI 499
W +++ +C+ +N+
Sbjct: 544 AWNSMI-SCYSRNNL 557
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 228/442 (51%), Gaps = 7/442 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS T+S + C L G+ +H L K + + SAL+ LYSKCG DA V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-VSPDPVTLVSAASACAQLS 125
F + D+V W S+++G ++G + AL F M ++ + PD + S +ACA L
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ G +HG + + GL ++ + +SL++LY K G + A +F M +++++W+SM++
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
CY+ N ++DLFN M+ + I P+ V++ S L A +S + L +G+ +H + G
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 610
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+T + AL+DMY+KC + A +IF ++ K ++ W ++ GY G ++ +F M
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK 670
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSI 364
G PD V + +++A + G +++ + F+ + G + N A+++++ + +
Sbjct: 671 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 730
Query: 365 DNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK-VTFISIL 422
+ A + M + D IW +++A H E + ++ ++P + T++ ++
Sbjct: 731 EEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR---MEPERGSTYVQLI 787
Query: 423 SACSHAGLVEEGITIFDIMVNK 444
+ AGL E + +M K
Sbjct: 788 NLYMEAGLKNEAAKLLGLMKEK 809
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 153/282 (54%), Gaps = 3/282 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PDS ++ +C GL+ L G +HG + K L ++FVGS+LI+LYSKCG A++
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF ++V W S+++ Y R+ PEL++ F+ M + + + PD V++ S A + +
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQGIFPDSVSITSVLVAISSTA 591
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
G+S+HG+ R G+ + L N+L+++Y K G K AE +F++M K +I+W+ M+
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ-LAVSYGFE 244
Y +G AL LF+EM P+ VT +S + AC + ++EEG+ I + + YG E
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
++D+ + E A +P + D W L
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLL 753
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF--- 169
T S AC+ L++ G++IHG V G +A SL+N+Y K G + A +F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 170 ----REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA-CAS 224
+ +DV W+SM+ Y + F M+ + P+ +L + C
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 225 ASY-LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWA 282
++ EEG++IH + + ++ + TAL+DMY K +A +F I K +VV W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 283 VLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS 342
V+ G+ +G+ S++++ ++ V+ + + L A S+ +H V K
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLF 402
G N+ Y+ SL+ MY+KC + A VF + K + IW++++AAY + G AL LF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
M S L P+ T +++S CS GL G ++
Sbjct: 362 GFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSV 395
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 14/232 (6%)
Query: 210 PNWV---TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
P W T S L+AC++ + L G+ IH V G+ + ++T+L++MY+KC + A
Sbjct: 55 PFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYA 114
Query: 267 VDIFN-------RIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
V +F+ + +DV W + GY + + + F ML GVRPDA +L +
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 320 LTAISELGVL--QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
++ + + G ++ +H F+ ++ D + ++ +LI+MY K +A +VF + K
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 378 -DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+VV+W+ +I +G G E +L L Y +A ++ +K +F L ACS +
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDL-YMLAKNNSVKLVSTSFTGALGACSQS 285
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 308/589 (52%), Gaps = 24/589 (4%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L+SC L +L +G +H K + D V +A +++Y+KC M DA +F +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
+ +++TGY + AL F R+ + + D ++L ACA + G I+G
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
+ L + +AN+ +++YGK ++ A +F EM +D +SW++++A + NG
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMD 255
L LF M+ RIEP+ T S L+AC S L G +IH V G ++V +L+D
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLID 525
Query: 256 MYLKCSSPENAVDIFNRIPKKD--------------------VVAWAVLFGGYAETGMAH 295
MY KC E A I +R ++ V+W + GY +
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 296 KSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLI 355
+ +F M+ G+ PD +L + L +HA V K ++ YI ++L+
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLV 645
Query: 356 EMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
+MY+KC + ++ +F +D V W+++I Y HG+GEEA++LF +M ++KPN
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNH 704
Query: 416 VTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIIN 475
VTFISIL AC+H GL+++G+ F +M Y L P HY MVD+LG+ G++ RAL++I
Sbjct: 705 VTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Query: 476 NMPMQAGPHVWGALLGACHIH-HNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
MP +A +W LLG C IH +N+++ E A L LDP + YTLLSN+Y W
Sbjct: 765 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
+ LR ++ +LKK G S VELK+E+H F+ D+ H ++I+E L
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/542 (26%), Positives = 261/542 (48%), Gaps = 35/542 (6%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T +I LK C L+ +G IHG + + D D+ SAL+++Y+K +++ VF
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
P+ + V W++I+ G ++ LAL FF M + + S +CA LS+
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSEL 297
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+LG +H + + + L++Y K +++ A+ILF + + S+++M+ Y
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+ AL LF+ ++ + + ++L RACA L EG +I+ LA+ L+
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
V+ A +DMY KC + A +F+ + ++D V+W + + + G ++++ +F +ML
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
+ PD IL A + G L + +H+ + KSG +N +G SLI+MY+KC I+ A
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 368 NKV----------------FRGMAYKDV----VIWSSIIAAYGFHGQGEEALKLFYQMAN 407
K+ M K + V W+SII+ Y Q E+A LF +M
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+ P+K T+ ++L C++ G I ++ K +L D +VD+ + G+L
Sbjct: 597 MG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDL 654
Query: 468 DRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFP------LDPNHAGYYT 521
+ ++ ++ W A++ C H+ K GE A + LF + PNH + +
Sbjct: 655 HDS-RLMFEKSLRRDFVTWNAMI--CGYAHHGK-GEEAIQ-LFERMILENIKPNHVTFIS 709
Query: 522 LL 523
+L
Sbjct: 710 IL 711
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 234/491 (47%), Gaps = 33/491 (6%)
Query: 13 SIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK 72
S K C LE+G+ H + FV + L+++Y+ + A VF + P
Sbjct: 52 SFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL 111
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVS------------------------ 108
DVV W ++ GY +S A +FF+ M V + VS
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 109 ------PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
D T C+ L D+ LG IHG V R G DT + A++LL++Y K
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
+ +F+ +P+K+ +SWS+++A N + AL F EM + S LR+C
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWA 282
A+ S L G ++H A+ F + V TA +DMY KC + ++A +F+ + ++
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 283 VLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS 342
+ GY++ K++ +F ++S G+ D ++L + A + + L + + ++ KS
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLF 402
+ + + I+MY KC ++ A +VF M +D V W++IIAA+ +G+G E L LF
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLG 462
M S ++P++ TF SIL AC+ G + G+ I +V K + +S ++D+
Sbjct: 472 VSML-RSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMASNSSVGCSLIDMYS 528
Query: 463 RMGELDRALDI 473
+ G ++ A I
Sbjct: 529 KCGMIEEAEKI 539
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 178/349 (51%), Gaps = 15/349 (4%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
N ++N Y K+ + A F MP +DV+SW+SML+ Y NG + ++++F +M + IE
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 210 PNWVTLVSALRACASASYLEE---GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
+ T L+ C S+LE+ G +IH + V G + + ++AL+DMY K +
Sbjct: 178 FDGRTFAIILKVC---SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM--LSDGVRPDAVA-LVKILTAI 323
+ +F IP+K+ V+W+ + G + + +++ F M ++ GV A +++ A+
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
SEL + Q LHA KS F + + + ++MYAKC ++ +A +F + ++
Sbjct: 295 SELRLGGQ---LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
++I Y G +AL LF+++ + S L ++++ + AC+ + EG+ I+ + +
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI- 409
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
K L D +D+ G+ L A + + M + W A++ A
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 3/181 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T + L +C L +G+ IH + K+ L D+++ S L+++YSKCG+++D+ +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + + D V W +++ GY G E A+ F RM +LE + P+ VT +S ACA +
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHVTFISILRACAHMGL 719
Query: 127 SKLGRSIHGFVKR-CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSML 184
G +KR GLD L ++++++ GK+G +K A L REMP + D + W ++L
Sbjct: 720 IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Query: 185 A 185
Sbjct: 780 G 780
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 324/601 (53%), Gaps = 46/601 (7%)
Query: 30 MIHGFLKK-----------ENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLW 78
MI G+L+ E + D+ + +I+ Y + + A E+F P+ DV W
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 79 TSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS-KLGRS----- 132
++++GY ++G + A + F RM +VS + L+SA +++ ++ L +S
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN--ALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 133 -------IHGFVK-------RCGLDT----HLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+ GFVK R D+ + N+++ Y ++G I A LF E P
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+DV +W++M++ Y N A +LF DK E N V+ + L +E +++
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELF----DKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMA 294
+ T+ T Y +C A ++F+++PK+D V+WA + GY+++G +
Sbjct: 335 FDVMPCRNVSTWNTMITG----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
+++ +F M +G R + + L+ +++ L+ LH + K G++ ++G +L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
+ MY KC SI+ AN +F+ MA KD+V W+++IA Y HG GE AL+ F M LKP+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPD 509
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
T +++LSACSH GLV++G F M Y +MP+S+HY MVDLLGR G L+ A +++
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 475 NNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
NMP + +WG LLGA +H N ++ E AA +F ++P ++G Y LLSN+Y W
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREEC 594
+ KLR +++ +KKV G S +E++N+ H+F D FH E D+IF L +LD++M++
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Query: 595 Y 595
Y
Sbjct: 690 Y 690
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 176/425 (41%), Gaps = 72/425 (16%)
Query: 41 DGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSR 100
D D+ + I Y + G N+A+ VF P+ V + +++GY R+G ELA F
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 101 MAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG 160
M + VS N ++ Y +
Sbjct: 121 MPERDLVS----------------------------------------WNVMIKGYVRNR 140
Query: 161 SIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
++ A LF MP++DV SW++ML+ YA NG +A +F+ M +K + +W L+SA
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN-DVSWNALLSAY- 198
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
S +EE + + ++ L+ ++K A F+ + +DVV+
Sbjct: 199 --VQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 252
Query: 281 WAVLFGGYAETGMAHKSMEVF-----------CNMLSDGVRPDAVALVK-ILTAISELGV 328
W + GYA++G ++ ++F M+S ++ V + + + E
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 312
Query: 329 LQQAVCLHAFV-------TKSGFD----NNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
+ L +V K FD N ++I YA+C I A +F M +
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
D V W+++IA Y G EAL+LF QM + N+ +F S LS C+ +E G +
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQL 431
Query: 438 FDIMV 442
+V
Sbjct: 432 HGRLV 436
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
R + + S AL +C + LE+G+ +HG L K + FVG+AL+ +Y KCG + +A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
++F E D+V W +++ GY R G E+AL FF M E + PD T+V+ SAC+
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK-REGLKPDDATMVAVLSACSHT 523
Query: 125 SDSKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSS 182
GR + + G+ + +++L G+ G ++ A L + MP + D W +
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 183 MLA 185
+L
Sbjct: 584 LLG 586
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 310/584 (53%), Gaps = 38/584 (6%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEV 107
S +I +Y+ +++A+ +F P V+ W S++ + ALA F M
Sbjct: 43 SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK---TGS--- 161
PD S +C + D + G S+HGF+ R G+D L N+L+N+Y K GS
Sbjct: 103 -PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 162 ------------------------------IKSAEILFREMPDKDVISWSSMLACYADNG 191
I S +F MP KDV+S+++++A YA +G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
+AL + EM ++P+ TL S L + + +G++IH + G + + + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
+L+DMY K + E++ +F+R+ +D ++W L GY + G ++++ +F M++ V+P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
AVA ++ A + L L LH +V + GF +N +I ++L++MY+KC +I A K+F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
M D V W++II + HG G EA+ LF +M +KPN+V F+++L+ACSH GLV
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLV 460
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLG 491
+E F+ M Y L + EHY + DLLGR G+L+ A + I+ M ++ VW LL
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 492 ACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKV 551
+C +H N+++ E A+ +F +D + G Y L+ N+Y + W AKLR +++ L+K
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 552 LGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
S +E+KN+ H FV+ DR H D+I E L+ + +M +E Y
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A +P + S + +C L L +G+ +HG++ + ++F+ SAL+++YSKCG +
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A ++F D V WT+I+ G+ G A++ F M + V P+ V V+ +AC+
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACS 455
Query: 123 Q--LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM---PDKDV 177
L D G + K GL+ L ++ +L G+ G ++ A +M P V
Sbjct: 456 HVGLVDEAWG-YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 178 ISWSSMLA 185
WS++L+
Sbjct: 515 --WSTLLS 520
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 315/591 (53%), Gaps = 7/591 (1%)
Query: 9 SHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFM 68
S++ ++C L+ L GR++H ++ + + + + ++++Y +C + DA ++F
Sbjct: 83 SYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 69 EYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV--TLVSAASACAQLSD 126
E + + V T++++ Y G + A+ FS M + P + TL+ + L
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD- 201
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
GR IH V R GL ++ S+ ++N+Y K G + A+ +F +M K ++ + ++
Sbjct: 202 --FGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y G A +AL LF +++ + +E + L+ACAS L G++IH G E E
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+V T L+D Y+KCSS E+A F I + + V+W+ + GY + ++++ F ++ S
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 307 DGVRP-DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
++ I A S L +HA K ++Y ++LI MY+KC +D
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+AN+VF M D+V W++ I+ + ++G EAL+LF +M + +KPN VTFI++L+AC
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLTAC 498
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SHAGLVE+G D M+ KY + P +HY M+D+ R G LD AL + NMP +
Sbjct: 499 SHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS 558
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W L C H N+++GE+A + L LDP Y L N+Y W AA++ L+ E
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
LKK L S ++ K ++H F+ D+ H ++ +I+E L++ D M + ++
Sbjct: 619 RMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQ 669
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 188/390 (48%), Gaps = 4/390 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P S + LKS V + L+ GR IH + + L + + + ++ +Y KCG + A
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + V T ++ GY ++G AL F + V E V D ACA L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLE 299
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ LG+ IH V + GL++ +S+ L++ Y K S +SA F+E+ + + +SWS++++
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 186 CYADNGAATNALDLFNEMIDKRIEP-NWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
Y A+ F + K N T S +AC+ + G ++H A+
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+AL+ MY KC ++A ++F + D+VAW G+A G A +++ +F M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+S G++P++V + +LTA S G+++Q CL + K +I++YA+
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
+D A K + M ++ D + W ++ H
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 150/296 (50%), Gaps = 8/296 (2%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
DS S+ LK+C L++L +G+ IH + K L+ ++ VG+ L++ Y KC A F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E +P+ V W++I++GY + E A+ F + + T S AC+ L+D
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 128 KLGRSIHG-FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+G +H +KR + + ++L+ +Y K G + A +F M + D+++W++ ++
Sbjct: 404 NIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGFEL 245
+A G A+ AL LF +M+ ++PN VT ++ L AC+ A +E+G+ + + Y
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEV 300
++D+Y + + A+ +P + D ++W G HK++E+
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG----CWTHKNLEL 574
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 333/610 (54%), Gaps = 28/610 (4%)
Query: 7 PDSHTVSIALKSCVGL---QKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMND 62
P S T+ + +C L + L +G+ +H + L+K L+ F+ + L+ +Y K G++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLAS 254
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+ + + D+V W ++++ ++ AL + M VLE V PD T+ S AC+
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEPDEFTISSVLPACS 313
Query: 123 QLSDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
L + G+ +H + + G LD + + ++L+++Y + S +F M D+ + W+
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 182 SMLACYADNGAATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+M+A Y+ N AL LF M + + N T+ + AC + IH V
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG-------M 293
G + + V LMDMY + + A+ IF ++ +D+V W + GY + +
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 294 AHKSMEVFCNMLSDG-----VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
HK M+ +S G ++P+++ L+ IL + + L L + +HA+ K+ +
Sbjct: 494 LHK-MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+G++L++MYAKC + + KVF + K+V+ W+ II AYG HG G+EA+ L M
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 409 SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD 468
+KPN+VTFIS+ +ACSH+G+V+EG+ IF +M Y + P S+HY +VDLLGR G +
Sbjct: 613 G-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 469 RALDIINNMPM---QAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSN 525
A ++N MP +AG W +LLGA IH+N+++GE+AA+NL L+PN A +Y LL+N
Sbjct: 672 EAYQLMNMMPRDFNKAG--AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 526 IYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRK 585
IY W A ++R +KE ++K G S +E +EVH FVA D H +S+++ L
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 586 LDVKMREECY 595
L +MR+E Y
Sbjct: 790 LWERMRKEGY 799
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 254/509 (49%), Gaps = 20/509 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGD-MFVGSALIELYSKCGEMNDAV 64
+PD++ LK+ LQ +E+G+ IH + K D + V + L+ LY KCG+
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF + + V W S+++ E+AL F R + E V P TLVS +AC+ L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNL 212
Query: 125 SDSK---LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
+ +G+ +H + R G + + + N+L+ +YGK G + S+++L +D+++W+
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
++L+ N AL+ EM+ + +EP+ T+ S L AC+ L G+++H A+
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 242 G-FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
G + + V +AL+DMY C + +F+ + + + W + GY++ +++ +
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 301 FCNM-LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
F M S G+ ++ + ++ A G + +H FV K G D + ++ +L++MY+
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN----------HS 409
+ ID A ++F M +D+V W+++I Y F E+AL L ++M N
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
LKPN +T ++IL +C+ + +G I + K L D +VD+ + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 470 ALDIINNMPMQAGPHVWGALLGACHIHHN 498
+ + + +P Q W ++ A +H N
Sbjct: 571 SRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 199/405 (49%), Gaps = 8/405 (1%)
Query: 78 WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
W ++ RS A+ + M VL + PD + A A L D +LG+ IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 138 KRCGLDT-HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNA 196
+ G +++AN+L+NLY K G + +F + +++ +SW+S+++ A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEE---GRKIHQLAVSYGFELETTVSTAL 253
L+ F M+D+ +EP+ TLVS + AC++ E G+++H + G EL + + L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+ MY K ++ + +D+V W + + +++E M+ +GV PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSG-FDNNEYIGASLIEMYAKCSSIDNANKVFR 372
+ +L A S L +L+ LHA+ K+G D N ++G++L++MY C + + +VF
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
GM + + +W+++IA Y + +EAL LF M + L N T ++ AC +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
I +V K L D ++D+ R+G++D A+ I M
Sbjct: 423 RKEAIHGFVV-KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+S T+ L SC L L G+ IH + K NL D+ VGSAL+++Y+KCG + + +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + P+ +V+ W I+ Y G + A+ RM +++ V P+ VT +S +AC+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 126 DSKLGRSIHGFVK-RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD--KDVISWSS 182
G I +K G++ +++L G+ G IK A L MP +WSS
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 183 MLA 185
+L
Sbjct: 693 LLG 695
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 307/567 (54%), Gaps = 14/567 (2%)
Query: 38 ENLDGD-----MFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPE 92
E +D D + V ++L+ LY+KCG++ DA+++F E P DV+ + G+ R+ E
Sbjct: 79 EPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETE 138
Query: 93 LALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
RM L D TL S C + + IH G D +S+ N L
Sbjct: 139 SGFVLLKRM--LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKL 196
Query: 153 LNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
+ Y K G S +F M ++VI+ +++++ +N + L LF+ M + PN
Sbjct: 197 ITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNS 256
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
VT +SAL AC+ + + EG++IH L YG E E + +ALMDMY KC S E+A IF
Sbjct: 257 VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI---SELGVL 329
+ D V+ V+ G A+ G ++++ F ML GV DA + +L + LG+
Sbjct: 317 TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
+Q LH+ V K F N ++ LI MY+KC + ++ VFR M ++ V W+S+IAA+
Sbjct: 377 KQ---LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
HG G ALKL+ +M ++KP VTF+S+L ACSH GL+++G + + M + + P
Sbjct: 434 ARHGHGLAALKLYEEMTT-LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP 492
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
+EHY ++D+LGR G L A I+++P++ +W ALLGAC H + ++GE AA+ L
Sbjct: 493 RTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552
Query: 510 FPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVAS 569
F P+ + + L++NIY W AK +K + K G S +E++++ HSFV
Sbjct: 553 FQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVE 612
Query: 570 DRFHDESDQIFEVLRKLDVKMREECYE 596
D+ H +++ I++VL L M +E Y
Sbjct: 613 DKLHPQAEAIYDVLSGLFPVMVDEGYR 639
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 192/407 (47%), Gaps = 6/407 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T++I L C + V +MIH D ++ VG+ LI Y KCG VF
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+V+ T++++G + E L FS M V P+ VT +SA +AC+
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR-RGLVHPNSVTYLSALAACSGSQRI 272
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G+ IH + + G+++ L + ++L+++Y K GSI+ A +F + D +S + +L
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A NG+ A+ F M+ +E + + + L + L G+++H L + F T
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
V+ L++MY KC ++ +F R+PK++ V+W + +A G +++++ M +
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 308 GVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
V+P V + +L A S +G++ + L+ G + +I+M + +
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512
Query: 367 ANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQMANHS 409
A + K D IW +++ A FHG GE A + +Q A S
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDS 559
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 153/283 (54%), Gaps = 5/283 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+S T AL +C G Q++ G+ IH L K ++ ++ + SAL+++YSKCG + DA +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + D V T I+ G ++G+ E A+ FF RM L+ +VSA + + +
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM--LQAGVEIDANVVSAVLGVSFIDN 371
Query: 127 S-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
S LG+ +H V + + + N L+N+Y K G + ++ +FR MP ++ +SW+SM+A
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIA 431
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGFE 244
+A +G AL L+ EM ++P VT +S L AC+ +++GR+ ++++ +G E
Sbjct: 432 AFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE 491
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFG 286
T T ++DM + + A + +P K D W L G
Sbjct: 492 PRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ A D++ VS L L +G+ +H + K G+ FV + LI +YSKCG++
Sbjct: 349 LQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDL 408
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
D+ VF PK + V W S++ + R G AL + M L EV P VT +S A
Sbjct: 409 TDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL-EVKPTDVTFLSLLHA 467
Query: 121 CAQLSDSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVI 178
C+ + GR + +K G++ ++++ G+ G +K A+ +P K D
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527
Query: 179 SWSSMLACYADNG 191
W ++L + +G
Sbjct: 528 IWQALLGACSFHG 540
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 305/584 (52%), Gaps = 31/584 (5%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
++F + L+ YSK G +++ F + P D V W ++ GY SG A+ ++ M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
+ VTL++ + LG+ IHG V + G +++L + + LL +Y G I
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 163 KSAEILFREMPD------------------------------KDVISWSSMLACYADNGA 192
A+ +F + D KD +SW++M+ A NG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
A A++ F EM + ++ + S L AC + EG++IH + F+ V +A
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L+DMY KC A +F+R+ +K+VV+W + GY +TG A +++++F +M G+ PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
L + ++A + + L++ H SG + + SL+ +Y KC ID++ ++F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
M +D V W+++++AY G+ E ++LF +M H LKP+ VT ++SACS AGLVE
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRAGLVE 489
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
+G F +M ++Y ++P HY M+DL R G L+ A+ IN MP W LL A
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 493 CHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
C N+++G+ AA++L LDP+H YTLLS+IY W + A+LR ++E +KK
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
GQS ++ K ++HSF A D DQI+ L +L+ K+ + Y+
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 200/398 (50%), Gaps = 37/398 (9%)
Query: 25 LEVGRMIHGFLKKENLDGDMFVGSALIELYSK---------------------------- 56
+ +G+ IHG + K + + VGS L+ +Y+
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 57 ---CGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVT 113
CG + DA+++F K D V W +++ G ++G + A+ F M V + + D
Sbjct: 215 LLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKV-QGLKMDQYP 272
Query: 114 LVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
S AC L G+ IH + R H+ + ++L+++Y K + A+ +F M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK 233
K+V+SW++M+ Y G A A+ +F +M I+P+ TL A+ ACA+ S LEEG +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 234 IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGM 293
H A++ G TVS +L+ +Y KC +++ +FN + +D V+W + YA+ G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 294 AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG-- 351
A +++++F M+ G++PD V L +++A S G++++ +T S + IG
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT-SEYGIVPSIGHY 511
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAA 388
+ +I+++++ ++ A + GM + D + W+++++A
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 152/287 (52%), Gaps = 3/287 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D + L +C GL + G+ IH + + N ++VGSALI++Y KC ++ A VF
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ +VV WT++V GY ++G E A+ F M + PD TL A SACA +S
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQAISACANVSSL 387
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+ G HG GL +++++NSL+ LYGK G I + LF EM +D +SW++M++ Y
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS-YGFELE 246
A G A + LF++M+ ++P+ VTL + AC+ A +E+G++ +L S YG
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETG 292
+ ++D++ + E A+ N +P D + W L G
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T+ A+ +C + LE G HG L + V ++L+ LY KCG+++D+ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E D V WT++V+ Y + G + F +M V + PD VTL SAC++
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGL 487
Query: 127 SKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSML 184
+ G R G+ + + +++L+ ++G ++ A MP D I W+++L
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 185 ACYADNG 191
+ + G
Sbjct: 548 SACRNKG 554
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 273/487 (56%), Gaps = 3/487 (0%)
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
SPD + +CA LS G+ +H V + G +T + +L+++Y K G + A
Sbjct: 50 SPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARK 109
Query: 168 LFREMPDKDVIS--WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
+F E P +S ++++++ Y N T+A +F M + + + VT++ + C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
YL GR +H V G + E V + + MY+KC S E +F+ +P K ++ W +
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
GY++ G+A+ +E++ M S GV PD LV +L++ + LG + + V +GF
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 346 NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
N ++ + I MYA+C ++ A VF M K +V W+++I YG HG GE L LF M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 406 ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMG 465
++P+ F+ +LSACSH+GL ++G+ +F M +Y+L P EHY +VDLLGR G
Sbjct: 350 IKRG-IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 466 ELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSN 525
LD A++ I +MP++ VWGALLGAC IH N+ M E+A + +PN+ GYY L+SN
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSN 468
Query: 526 IYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRK 585
IY KN ++R +++E +K G S VE K VH F+A DR H++++++ +L +
Sbjct: 469 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDE 528
Query: 586 LDVKMRE 592
L+ + E
Sbjct: 529 LETSVME 535
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 226/448 (50%), Gaps = 8/448 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ + + PD+ + LKSC L G+ +H + K + + FV +ALI +Y KCG +
Sbjct: 45 LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLV 104
Query: 61 NDAVEVFMEYPKPD--VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA 118
DA +VF E P+ V + ++++GY + A F RM VS D VT++
Sbjct: 105 ADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE-TGVSVDSVTMLGLV 163
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
C LGRS+HG + GLD+ +++ NS + +Y K GS+++ LF EMP K +I
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
+W+++++ Y+ NG A + L+L+ +M + P+ TLVS L +CA + G ++ +L
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
S GF VS A + MY +C + A +F+ +P K +V+W + G Y GM +
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGL 343
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL-HAFVTKSGFDNNEYIGASLIEM 357
+F +M+ G+RPD V +L+A S G+ + + L A + + + L+++
Sbjct: 344 MLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDL 403
Query: 358 YAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
+ +D A + M + D +W +++ A H + A F ++ + +PN +
Sbjct: 404 LGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI---EFEPNNI 460
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNK 444
+ ++S +EGI +M+ +
Sbjct: 461 GYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 8/328 (2%)
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W+ L A + ++ L+ M+ P+ + L++CAS S G+++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD--VVAWAVLFGGYAETGMAHKS 297
G E E V TAL+ MY KC +A +F P+ V + L GY +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+F M GV D+V ++ ++ + L LH K G D+ + S I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
Y KC S++ ++F M K ++ W+++I+ Y +G + L+L+ QM + S + P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-SGVCPDPFT 259
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+S+LS+C+H G + G + +V +P+ + + R G L +A + + M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVA 505
P+++ W A++G +H MGE+
Sbjct: 319 PVKSLVS-WTAMIGCYGMH---GMGEIG 342
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 316/608 (51%), Gaps = 68/608 (11%)
Query: 45 FVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVL 104
F + ++ YSK G+M+ E F + P+ D V WT+++ GY+ G A+ M V
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM-VK 139
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
E + P TL + ++ A + G+ +H F+ + GL ++S++NSLLN+Y K G
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 165 AEILF-------------------------------REMPDKDVISWSSMLACYADNGAA 193
A+ +F +M ++D+++W+SM++ + G
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 194 TNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
ALD+F++M+ D + P+ TL S L ACA+ L G++IH V+ GF++ V A
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 253 LMDMYLKCSSPENAV---------------------------------DIFNRIPKKDVV 279
L+ MY +C E A +IF + +DVV
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 280 AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFV 339
AW + GY + G +++ +F +M+ G RP++ L +L+ S L L +H
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 340 TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM-AYKDVVIWSSIIAAYGFHGQGEEA 398
KSG + + +LI MYAK +I +A++ F + +D V W+S+I A HG EEA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 399 LKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
L+LF M L+P+ +T++ + SAC+HAGLV +G FD+M + +++P HY MV
Sbjct: 500 LELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 459 DLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAG 518
DL GR G L A + I MP++ WG+LL AC +H NI +G+VAA+ L L+P ++G
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Query: 519 YYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQ 578
Y+ L+N+Y W AAK+R +K+ R+KK G S +E+K++VH F D H E ++
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 678
Query: 579 IFEVLRKL 586
I+ ++K+
Sbjct: 679 IYMTMKKI 686
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 211/461 (45%), Gaps = 83/461 (18%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKC--------- 57
P T++ L S + +E G+ +H F+ K L G++ V ++L+ +Y+KC
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 58 ----------------------GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELAL 95
G+M+ A+ F + + D+V W S+++G+ + G AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL 155
FS+M +SPD TL S SACA L +G+ IH + G D + N+L+++
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 156 YGKTGSIKSAEIL---------------------------------FREMPDKDVISWSS 182
Y + G +++A L F + D+DV++W++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
M+ Y +G+ A++LF M+ PN TL + L +S + L G++IH AV G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVF 301
+VS AL+ MY K + +A F+ I ++D V+W + A+ G A +++E+F
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG---------A 352
ML +G+RPD + V + +A + G++ Q + FD + + A
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQG--------RQYFDMMKDVDKIIPTLSHYA 555
Query: 353 SLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
+++++ + + A + M + DVV W S+++A H
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 172/418 (41%), Gaps = 105/418 (25%)
Query: 108 SPDPVTLVSAASACAQLSDSKLGRS--------IHGFVKRCGLDTHLSLANSLLNLYGKT 159
+P P++L + C L + +S +H V + GL + L N+L+N+Y KT
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 160 GSIKSAEILFREM-------------------------------PDKDVISWSSMLACYA 188
G A LF EM P +D +SW++M+ Y
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT 248
+ G A+ + +M+ + IEP TL + L + A+ +E G+K+H V G +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 249 VSTALMDMYLKCSSPENAVDIFNR-------------------------------IPKKD 277
VS +L++MY KC P A +F+R + ++D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAVCLH 336
+V W + G+ + G +++++F ML D + PD L +L+A + L L +H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK--------------------------- 369
+ + +GFD + + +LI MY++C ++ A +
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 370 ------VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
+F + +DVV W+++I Y HG EA+ LF M +PN T ++
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAM 419
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+S+T++ L L L G+ IHG K + V +ALI +Y+K G + A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 66 VF-MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
F + + D V WTS++ + G E AL F M ++E + PD +T V SAC
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-LMEGLRPDHITYVGVFSACTHA 528
Query: 125 SDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSS 182
GR +K + LS +++L+G+ G ++ A+ +MP + DV++W S
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 183 ML-AC 186
+L AC
Sbjct: 589 LLSAC 593
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 283/466 (60%), Gaps = 2/466 (0%)
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
GR +H + + + + N+LLN+Y K GS++ A +F +MP +D ++W+++++ Y+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
+ +AL FN+M+ PN TL S ++A A+ G ++H V GF+ V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+AL+D+Y + ++A +F+ + ++ V+W L G+A K++E+F ML DG
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
RP + + A S G L+Q +HA++ KSG + G +L++MYAK SI +A K
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
+F +A +DVV W+S++ AY HG G+EA+ F +M ++PN+++F+S+L+ACSH+G
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSHSG 377
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGAL 489
L++EG +++M K ++P++ HY +VDLLGR G+L+RAL I MP++ +W AL
Sbjct: 378 LLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 490 LGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLK 549
L AC +H N ++G AA+++F LDP+ G + +L NIY W++AA++R +KE+ +K
Sbjct: 437 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 550 KVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
K S VE++N +H FVA+D H + ++I ++ K++E Y
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 204/390 (52%), Gaps = 2/390 (0%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D + LK C + L GR++H + + D+ +G+ L+ +Y+KCG + +A +VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ P+ D V WT++++GY + P AL FF++M SP+ TL S A A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRG 177
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
G +HGF +CG D+++ + ++LL+LY + G + A+++F + ++ +SW++++A +
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A AL+LF M+ P+ + S AC+S +LE+G+ +H + G +L
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
L+DMY K S +A IF+R+ K+DVV+W L YA+ G +++ F M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
G+RP+ ++ + +LTA S G+L + + + K G + +++++ + ++ A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 368 NKVFRGMAYKDV-VIWSSIIAAYGFHGQGE 396
+ M + IW +++ A H E
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T+S +K+ ++ G +HGF K D ++ VGSAL++LY++ G M+DA V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + V W +++ G+ R E AL F M + + P + S AC+
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGF 277
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ G+ +H ++ + G N+LL++Y K+GSI A +F + +DV+SW+S+L
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA +G A+ F EM I PN ++ +S L AC+ + L+EG ++L G E
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA-WAVLF 285
++D+ + A+ +P + A W L
Sbjct: 398 AWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP + + +C LE G+ +H ++ K F G+ L+++Y+K G ++DA +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F K DVV W S++T Y + G + A+ +F M + + P+ ++ +S +AC+
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEISFLSVLTACSHSG 377
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS-WSSML 184
G + +K+ G+ ++++L G+ G + A EMP + + W ++L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 185 -AC 186
AC
Sbjct: 438 NAC 440
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 33/283 (11%)
Query: 319 ILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
+L + +L Q +HA + +S F ++ +G +L+ MYAKC S++ A KVF M +D
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 379 VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS--HAGLVEEGIT 436
V W+++I+ Y H + +AL F QM PN+ T S++ A + G +
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 437 IFDIMVNKYQLMPDSEHYG-IMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHI 495
F + + H G ++DL R G +D A + + + + W AL+
Sbjct: 185 GFCVKCG----FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG--- 236
Query: 496 HHNIKMGEVAAKNLFP------LDPNHAGYYTLL----SNIYCVDKNWHNAAKLRSLIKE 545
H + G A LF P+H Y +L S + W +A ++S
Sbjct: 237 -HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS---G 292
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDV 588
+L G +++++ + S HD + +IF+ L K DV
Sbjct: 293 EKLVAFAGNTLLDM------YAKSGSIHD-ARKIFDRLAKRDV 328
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 301/564 (53%), Gaps = 9/564 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+++ RP +T LK+C GL+ ++ G++IH + + DM+V +AL++ Y+KCGE+
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A++VF E PK D+V W ++++G+ + F M ++ +SP+ T+V A
Sbjct: 155 EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPA 214
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
+ + G+++HG+ R G L + +L++Y K+ I A +F K+ ++W
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTW 274
Query: 181 SSMLACYADNGAATNALDLFNEMIDK----RIEPNWVTLVSALRACASASYLEEGRKIHQ 236
S+M+ Y +N A ++F +M+ + P + L+ L CA L GR +H
Sbjct: 275 SAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHC 332
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
AV GF L+ TV ++ Y K S +A F+ I KDV+++ L G +
Sbjct: 333 YAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEE 392
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
S +F M + G+RPD L+ +LTA S L L H + G+ N I +L++
Sbjct: 393 SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMD 452
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
MY KC +D A +VF M +D+V W++++ +G HG G+EAL LF M + + P++V
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM-QETGVNPDEV 511
Query: 417 TFISILSACSHAGLVEEGITIFDIMVN-KYQLMPDSEHYGIMVDLLGRMGELDRALDIIN 475
T ++ILSACSH+GLV+EG +F+ M + ++P +HY M DLL R G LD A D +N
Sbjct: 512 TLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVN 571
Query: 476 NMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHN 535
MP + V G LL AC + N ++G +K + L LLSN Y + W +
Sbjct: 572 KMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWED 630
Query: 536 AAKLRSLIKENRLKKVLGQSMVEL 559
AA++R + K+ L K G S V++
Sbjct: 631 AARIRMIQKKRGLLKTPGYSWVDV 654
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 238/473 (50%), Gaps = 19/473 (4%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
L++C+ + L +G++IH L K +L V L LY+ C E+ A VF E P P
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 75 V--VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
+ + W ++ Y + E AL + +M + V P T ACA L G+
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKM-LNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
IH V T + + +L++ Y K G ++ A +F EMP +D+++W++M++ ++ +
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 193 ATNALDLFNEMIDKRIE---PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
T+ + LF +M +RI+ PN T+V A A L EG+ +H GF + V
Sbjct: 185 LTDVIGLFLDM--RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG- 308
T ++D+Y K A +F+ KK+ V W+ + GGY E M ++ EVF ML +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 309 ---VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
V P A+ L IL + G L C+H + K+GF + + ++I YAK S+
Sbjct: 303 VAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+A + F + KDV+ ++S+I + + EE+ +LF++M S ++P+ T + +L+AC
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT-SGIRPDITTLLGVLTAC 419
Query: 426 SHAGLVEEGITIFD-IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
SH + G + +V+ Y + ++ ++D+ + G+LD A + + M
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAV--NTSICNALMDMYTKCGKLDVAKRVFDTM 470
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 178/370 (48%), Gaps = 18/370 (4%)
Query: 114 LVSAASACAQLSDSKLGRSIHG-FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM 172
+S C + + LG+ IH +KR + ++ +L LY ++ A +F E+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 173 PDKDV--ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
P + I+W M+ YA N A ALDL+ +M++ + P T L+ACA +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
G+ IH F + V TAL+D Y KC E A+ +F+ +PK+D+VAW + G++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 291 TGMAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
+ +F +M DG+ P+ +V + A+ G L++ +H + T+ GF N+
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA--- 406
+ ++++YAK I A +VF K+ V WS++I Y + +EA ++F+QM
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 407 NHSDLKPNKVTFISILSA---------CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
N + + P + I + A C H V+ G I D+ V ++ YG +
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF-ILDLTVQN-TIISFYAKYGSL 359
Query: 458 VDLLGRMGEL 467
D + E+
Sbjct: 360 CDAFRQFSEI 369
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 314/595 (52%), Gaps = 9/595 (1%)
Query: 12 VSIALKSCVGLQKLEVGRMIHGFLKKENLDGDM--FVGSALIELYSKCGEMNDAVEVFME 69
+ + LK+ + + +GR++H + K LD F+ + LI +YSK A V
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
P +VV WTS+++G ++G AL F M E V P+ T A A A L
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G+ IH +CG + + S ++Y KT A LF E+P++++ +W++ ++
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 190 NGAATNALDLFNEMIDKRIE--PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+G A++ F E +RI+ PN +T + L AC+ +L G ++H L + GF+ +
Sbjct: 187 DGRPREAIEAFIEF--RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
+V L+D Y KC ++ IF + K+ V+W L Y + K+ ++ D
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
V + +L+A + + L+ +HA K+ + ++G++L++MY KC I+++
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS-DLKPNKVTFISILSACS 426
+ F M K++V +S+I Y GQ + AL LF +MA PN +TF+S+LSACS
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
AG VE G+ IFD M + Y + P +EHY +VD+LGR G ++RA + I MP+Q VW
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
GAL AC +H ++G +AA+NLF LDP +G + LLSN + W A +R +K
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQLKI 601
+KK G S + +KN+VH+F A DR H + +I L KL +M Y+ LK+
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKL 599
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 192/397 (48%), Gaps = 5/397 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T A K+ L+ G+ IH K D+FVG + ++Y K +DA ++
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P+ ++ W + ++ G P A+ F ++ P+ +T + +AC+
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLH 224
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG +HG V R G DT +S+ N L++ YGK I+S+EI+F EM K+ +SW S++A
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y N A L+ +E + + S L ACA + LE GR IH AV E
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V +AL+DMY KC E++ F+ +P+K++V L GGYA G ++ +F M
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 307 DGV--RPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
G P+ + V +L+A S G ++ + + + G + + +++M +
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 364 IDNANKVFRGMAYKDVV-IWSSIIAAYGFHGQGEEAL 399
++ A + + M + + +W ++ A HG+ + L
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 302/552 (54%), Gaps = 5/552 (0%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFS-RM 101
D+F+ L + + A + + + LW S++ + T L+F + R
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRH 94
Query: 102 AVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS 161
V P T A +L DS + H + + GLD+ + NSL++ Y +G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 162 IKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
A LF DKDV++W++M+ + NG+A+ A+ F EM + N +T+VS L+A
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 222 CASASYLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
+ GR +H L + G + + + ++L+DMY KCS ++A +F+ +P ++VV
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVT 273
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W L GY ++ K M VF ML V P+ L +L+A + +G L + +H ++
Sbjct: 274 WTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI 333
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
K+ + N G +LI++Y KC ++ A VF + K+V W+++I + HG +A
Sbjct: 334 KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
LFY M + S + PN+VTF+++LSAC+H GLVEEG +F M ++ + P ++HY MVDL
Sbjct: 394 LFYTMLS-SHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYY 520
GR G L+ A +I MPM+ VWGAL G+C +H + ++G+ AA + L P+H+G Y
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRY 512
Query: 521 TLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA-SDRFHDESDQI 579
TLL+N+Y +NW A++R +K+ ++ K G S +E+K ++ F+A D+ ESD +
Sbjct: 513 TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDL 572
Query: 580 FEVLRKLDVKMR 591
++ L + V+MR
Sbjct: 573 YKTLDTVGVQMR 584
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 203/395 (51%), Gaps = 9/395 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P HT LK+ L+ + H + K LD D FV ++LI YS G + A +
Sbjct: 102 PSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F DVV WT+++ G+ R+G+ A+ +F M V+ + +T+VS A ++ D
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKK-TGVAANEMTVVSVLKAAGKVED 219
Query: 127 SKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ GRS+HG G + + + +SL+++YGK A+ +F EMP ++V++W++++A
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y + + +F EM+ + PN TL S L ACA L GR++H + E+
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
TT T L+D+Y+KC E A+ +F R+ +K+V W + G+A G A + ++F ML
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG---ASLIEMYAKCS 362
S V P+ V + +L+A + G++++ L F++ G N E A +++++ +
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRL--FLSMKGRFNMEPKADHYACMVDLFGRKG 457
Query: 363 SIDNANKVFRGMAYKDV-VIWSSIIAAYGFHGQGE 396
++ A + M + V+W ++ + H E
Sbjct: 458 LLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 165/294 (56%), Gaps = 10/294 (3%)
Query: 11 TVSIALKSCVGLQKLEVGRMIHG-FLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
TV LK+ ++ + GR +HG +L+ + D+F+GS+L+++Y KC +DA +VF E
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDE 265
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
P +VV WT+++ GY +S + + F M + +V+P+ TL S SACA +
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM-LKSDVAPNEKTLSSVLSACAHVGALHR 324
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
GR +H ++ + ++ + + +L++LY K G ++ A ++F + +K+V +W++M+ +A
Sbjct: 325 GRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAA 384
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
+G A +A DLF M+ + PN VT ++ L ACA +EEGR++ L++ F +E
Sbjct: 385 HGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKA 443
Query: 250 S--TALMDMYLKCSSPENAVDIFNRIPKKDV-VAWAVLFGGYAETGMAHKSMEV 300
++D++ + E A + R+P + V W LFG + + HK E+
Sbjct: 444 DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG----SCLLHKDYEL 493
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 314/558 (56%), Gaps = 7/558 (1%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
D+FV S+ I +Y++ G++ + VF + ++ +W +++ Y ++ ++ F
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
+E+ D VT + AASA + L +LGR HGFV + + + + NSL+ +Y + GS+
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
+ +F M ++DV+SW++M++ + NG L L EM + + +++T+ + L A
Sbjct: 370 HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA 429
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF--NRIPKKDVVA 280
++ E G++ H + G + E +++ L+DMY K + +F + ++D
Sbjct: 430 SNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W + GY + G K+ VF ML +RP+AV + IL A S++G + LH F
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
+ D N ++ ++L++MY+K +I A +F ++ V ++++I YG HG GE A+
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
LF M S +KP+ +TF+++LSACS++GL++EG+ IF+ M Y + P SEHY + D+
Sbjct: 609 LFLSM-QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 461 LGRMGELDRALDIINNMPMQAG-PHVWGALLGACHIHHNIKMGEVAAKNLFPLD--PNHA 517
LGR+G ++ A + + + + +WG+LLG+C +H +++ E ++ L D N +
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFS 727
Query: 518 GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESD 577
GY LLSN+Y ++ W + K+R ++E LKK +G+S +E+ V+ FV+ D+ H S
Sbjct: 728 GYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSS 787
Query: 578 QIFEVLRKLDVKMREECY 595
+I++V+ L MR + +
Sbjct: 788 EIYDVIDGLAKDMRGDSF 805
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 232/480 (48%), Gaps = 15/480 (3%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE-- 65
D++T S LK+C + L+ G+ +H L + + V ++L+ +Y C D E
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 66 ----VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
VF + +VV W ++++ Y ++G A F M + EV P PV+ V+ A
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAV 224
Query: 122 AQLSDSKLGRSIHGFVKRCGLD--THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
+ K +G + + G + L + +S +++Y + G I+S+ +F ++++
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 180 WSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W++M+ Y N +++LF E I K I + VT + A A ++ +E GR+ H
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
EL + +LM MY +C S + +F + ++DVV+W + + + G+ + +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
+ M G + D + + +L+A S L + HAF+ + G E + + LI+MY
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMY 463
Query: 359 AKCSSIDNANKVFRGMAY--KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
+K I + K+F G Y +D W+S+I+ Y +G E+ +F +M +++PN V
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ-NIRPNAV 522
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINN 476
T SIL ACS G V+ G + + +Y L + +VD+ + G + A D+ +
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 213/396 (53%), Gaps = 7/396 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T +A + LQ++E+GR HGF+ K + + + ++L+ +YS+CG ++ + VF
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ + DVV W ++++ + ++G + L M + D +T+ + SA + L +
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFKIDYITVTALLSAASNLRNK 435
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFR--EMPDKDVISWSSMLA 185
++G+ H F+ R G+ + + L+++Y K+G I+ ++ LF ++D +W+SM++
Sbjct: 436 EIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y NG +F +M+++ I PN VT+ S L AC+ ++ G+++H ++ +
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ 554
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
V++AL+DMY K + + A D+F++ +++ V + + GY + GM +++ +F +M
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK-SGFDNNEYIGASLIEMYAKCSSI 364
G++PDA+ V +L+A S G++ + + + + + + + +M + +
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRV 674
Query: 365 DNANKVFRGMAYKDVV--IWSSIIAAYGFHGQGEEA 398
+ A + +G+ + + +W S++ + HG+ E A
Sbjct: 675 NEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 197/397 (49%), Gaps = 28/397 (7%)
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP----DPVTLVSAA 118
A ++F PKP VLW +I+ G+ + P AL F+SRM ++ +P D T S
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM---KKTAPFTNCDAYTYSSTL 114
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS------AEILFREM 172
ACA+ + K G+++H + RC ++ + NSL+N+Y + +F M
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM 174
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
K+V++W+++++ Y G A F M+ ++P+ V+ V+ A + + +++
Sbjct: 175 RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKAN 234
Query: 233 KIHQLAVSYGFEL--ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
+ L + G E + V ++ + MY + E++ +F+ ++++ W + G Y +
Sbjct: 235 VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQ 294
Query: 291 TGMAHKSMEVFCNML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
+S+E+F + S + D V + +A+S L ++ H FV+K+ +
Sbjct: 295 NDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV 354
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
I SL+ MY++C S+ + VF M +DVV W+++I+A+ +G +E L L Y+M
Sbjct: 355 IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 414
Query: 410 DLKPNKVTFISILSACS-----------HAGLVEEGI 435
K + +T ++LSA S HA L+ +GI
Sbjct: 415 -FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 158/332 (47%), Gaps = 15/332 (4%)
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP----NWV 213
+ G+ + A LF +P + W++++ + N AL ++ M K+ P +
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAY 108
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD----- 268
T S L+ACA L+ G+ +H + V +LM+MY+ C + + +
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 269 -IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+F+ + +K+VVAW L Y +TG ++ F M+ V+P V+ V + A+S
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 328 VLQQAVCLHAFVTKSG--FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSI 385
+++A + + K G + + ++ +S I MYA+ I+++ +VF +++ +W+++
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 386 IAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKY 445
I Y + E+++LF + ++ ++VT++ SA S VE G + +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 446 QLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ +P +MV + R G + ++ + +M
Sbjct: 349 RELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP++ TV+ L +C + +++G+ +HGF ++ LD ++FV SAL+++YSK G + A +
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAED 577
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+F + + + V +T+++ GY + G E A++ F M + PD +T V+ SAC+
Sbjct: 578 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE-SGIKPDAITFVAVLSACS 633
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 298/590 (50%), Gaps = 6/590 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
+ H + LK V L K E+ +H + K D + FVG+ALI YS CG ++ A VF
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
D+V+W IV+ Y +G E +L S M + P+ T +A A L
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR-MAGFMPNNYTFDTALKASIGLGAF 263
Query: 128 KLGRSIHG-FVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ +HG +K C LD + + LL LY + G + A +F EMP DV+ WS M+A
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVG--LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ NG A+DLF M + + PN TL S L CA G ++H L V GF+L
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ VS AL+D+Y KC + AV +F + K+ V+W + GY G K+ +F L
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+ V V L A + L + V +H K+ + SLI+MYAKC I
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A VF M DV W+++I+ Y HG G +AL++ M + D KPN +TF+ +LS C
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR-DCKPNGLTFLGVLSGC 560
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
S+AGL+++G F+ M+ + + P EHY MV LLGR G+LD+A+ +I +P + +
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W A+L A +N + +A+ + ++P Y L+SN+Y K W N A +R +KE
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+KK G S +E + +VH F H + I +L L++K Y
Sbjct: 681 MGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 204/384 (53%), Gaps = 3/384 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+++T ALK+ +GL + + +HG + K D VG L++LY++ G+M+DA +V
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E PK DVV W+ ++ + ++G A+ F RM V P+ TL S + CA
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AFVVPNEFTLSSILNGCAIGKC 363
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
S LG +HG V + G D + ++N+L+++Y K + +A LF E+ K+ +SW++++
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y + G A +F E + ++ VT SAL ACAS + ++ G ++H LA+ +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
VS +L+DMY KC + A +FN + DV +W L GY+ G+ +++ + M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 307 DGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+P+ + + +L+ S G++ Q C + + G + ++ + + +D
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 366 NANKVFRGMAYK-DVVIWSSIIAA 388
A K+ G+ Y+ V+IW ++++A
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 234/493 (47%), Gaps = 16/493 (3%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
DSH L+ C+ + IH + K+ D+F + L+ Y K G DA+ +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E P+ + V + ++ GY + + +SR+ E +P S L +
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLH-REGHELNPHVFTSFLKLFVSLDKA 162
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
++ +H + + G D++ + +L+N Y GS+ SA +F + KD++ W+ +++CY
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+NG ++L L + M PN T +AL+A + + +H + + L+
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
V L+ +Y + +A +FN +PK DVV W+ + + + G ++++++F M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 308 GVRPDAVALVKILT--AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
V P+ L IL AI + L + LH V K GFD + Y+ +LI++YAKC +D
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQ--LHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A K+F ++ K+ V W+++I Y G+G +A +F + A + + +VTF S L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSALGAC 459
Query: 426 SHAGLVEEGITI--FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
+ ++ G+ + I N + + S ++D+ + G++ A + N M
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNS---LIDMYAKCGDIKFAQSVFNEME-TIDV 515
Query: 484 HVWGALLGACHIH 496
W AL+ H
Sbjct: 516 ASWNALISGYSTH 528
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 293/554 (52%), Gaps = 15/554 (2%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE---MNDAVEVFMEYPK 72
L++C L +L +HG + K ++ ++ S LI+ + C E ++ A VF
Sbjct: 13 LENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P V +W S++ GY S P+ AL F+ M + + SPD T AC+ L D + G
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+HGFV + G + ++ ++ LL++Y G + +F ++P +V++W S+++ + +N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE-------- 244
++A++ F EM ++ N +V L AC + G+ H GF+
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
++T+L+DMY KC A +F+ +P++ +V+W + GY++ G A +++ +F +M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
L G+ PD V + ++ A G Q +HA+V+K+GF + I +L+ MYAK
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
++A K F + KD + W+ +I HG G EAL +F +M + P+ +T++ +L A
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
CSH GLVEEG F M + + L P EHYG MVD+L R G + A ++ MP++ +
Sbjct: 429 CSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 488
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+WGALL C IH N+++ + + + +G Y LLSNIY W + +R +K
Sbjct: 489 IWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK 548
Query: 545 ENRLKKVLGQSMVE 558
R+ KVLG S VE
Sbjct: 549 SKRVDKVLGHSSVE 562
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 203/397 (51%), Gaps = 12/397 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T LK+C GL+ ++ G +HGF+ K + +M+V + L+ +Y CGE+N + V
Sbjct: 105 PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRV 164
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + P+ +VV W S+++G+ + A+ F M V + +V AC + D
Sbjct: 165 FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS-NGVKANETIMVDLLVACGRCKD 223
Query: 127 SKLGRSIHGFVKRCGLDTHLS--------LANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
G+ HGF++ G D + LA SL+++Y K G +++A LF MP++ ++
Sbjct: 224 IVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
SW+S++ Y+ NG A AL +F +M+D I P+ VT +S +RA + G+ IH
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
GF + + AL++MY K E+A F + KKD +AW V+ G A G ++++
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 403
Query: 299 EVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVTK-SGFDNNEYIGASLIE 356
+F M G PD + + +L A S +G++++ A + G + +++
Sbjct: 404 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 357 MYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
+ ++ + A ++ + M K +V IW +++ H
Sbjct: 464 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 500
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 308/589 (52%), Gaps = 3/589 (0%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
+S TVS L + + GR IHG + K D + V + L+ +Y+ G +A VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ P D++ W S++ + G AL M + S + VT SA +AC
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVTFTSALAACFTPDFF 361
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+ GR +HG V GL + + N+L+++YGK G + + + +MP +DV++W++++ Y
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA-SASYLEEGRKIHQLAVSYGFELE 246
A++ AL F M + + N++T+VS L AC LE G+ +H VS GFE +
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V +L+ MY KC ++ D+FN + ++++ W + A G + +++ M S
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GV D + + L+A ++L VL++ LH K GF+++ +I + +MY+KC I
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
K+ + + W+ +I+A G HG EE F++M +KP VTF+S+L+ACS
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG-IKPGHVTFVSLLTACS 660
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H GLV++G+ +D++ + L P EH ++DLLGR G L A I+ MPM+ VW
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
+LL +C IH N+ G AA+NL L+P Y L SN++ W + +R +
Sbjct: 721 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 780
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+KK S V+LK++V SF DR H ++ +I+ L + ++E Y
Sbjct: 781 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 829
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 240/494 (48%), Gaps = 7/494 (1%)
Query: 6 RPDSHTVSIALKSC-VGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+P S ++ + +C G +HGF+ K L D++V +A++ LY G ++ +
Sbjct: 38 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 97
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF E P +VV WTS++ GY G PE + + M E V + ++ S+C L
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG-EGVGCNENSMSLVISSCGLL 156
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
D LGR I G V + GL++ L++ NSL+++ G G++ A +F +M ++D ISW+S+
Sbjct: 157 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
A YA NG + +F+ M E N T+ + L + + GR IH L V GF+
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
V L+ MY A +F ++P KD+++W L + G + ++ + C+M
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+S G + V L A ++ LH V SG N+ IG +L+ MY K +
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ +V M +DVV W+++I Y ++AL F Q + N +T +S+LSA
Sbjct: 397 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSA 455
Query: 425 CSHAG-LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
C G L+E G + +V+ D ++ + + G+L + D+ N + +
Sbjct: 456 CLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NI 513
Query: 484 HVWGALLGACHIHH 497
W A+L A + HH
Sbjct: 514 ITWNAML-AANAHH 526
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 209/423 (49%), Gaps = 5/423 (1%)
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL-SDSKL 129
P + V W ++++G R G + FF +M L + P + S +AC + S +
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSFVIASLVTACGRSGSMFRE 60
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G +HGFV + GL + + ++ ++L+LYG G + + +F EMPD++V+SW+S++ Y+D
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
G +D++ M + + N ++ + +C GR+I V G E + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+L+ M + + A IF+++ ++D ++W + YA+ G +S +F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
++ + +L+ + + + +H V K GFD+ + +L+ MYA AN
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
VF+ M KD++ W+S++A++ G+ +AL L M + S N VTF S L+AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALAACFTPD 359
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGAL 489
E+G + ++V L + +V + G++GE+ + ++ MP + W AL
Sbjct: 360 FFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 417
Query: 490 LGA 492
+G
Sbjct: 418 IGG 420
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA-SASYLEE 230
MP ++ +SW++M++ G ++ F +M D I+P+ + S + AC S S E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
G ++H G + VSTA++ +Y + +F +P ++VV+W L GY++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
G + ++++ M +GV + ++ ++++ L + V KSG ++ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
SLI M ++D AN +F M+ +D + W+SI AAY +G EE+ ++F M D
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 411 LKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+ N T ++LS H + G I ++V
Sbjct: 241 -EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG-VLQQ 331
+P ++ V+W + G G+ + ME F M G++P + + ++TA G + ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 332 AVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGF 391
V +H FV KSG ++ Y+ +++ +Y + + KVF M ++VV W+S++ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 392 HGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE---GITIFDIMVNKYQLM 448
G+ EE + ++ M + N+ + ++S+C GL+++ G I +V K L
Sbjct: 121 KGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSC---GLLKDESLGRQIIGQVV-KSGLE 175
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA----CHIHHNIKMGEV 504
++ +LG MG +D A I + M + W ++ A HI + ++ +
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 505 AAKNLFPLDPNHAGYYTLLSNIYCVD-KNW 533
+ F + N TLLS + VD + W
Sbjct: 235 MRR--FHDEVNSTTVSTLLSVLGHVDHQKW 262
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 308/589 (52%), Gaps = 3/589 (0%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
+S TVS L + + GR IHG + K D + V + L+ +Y+ G +A VF
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ P D++ W S++ + G AL M + S + VT SA +AC
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVTFTSALAACFTPDFF 378
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+ GR +HG V GL + + N+L+++YGK G + + + +MP +DV++W++++ Y
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA-SASYLEEGRKIHQLAVSYGFELE 246
A++ AL F M + + N++T+VS L AC LE G+ +H VS GFE +
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V +L+ MY KC ++ D+FN + ++++ W + A G + +++ M S
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GV D + + L+A ++L VL++ LH K GF+++ +I + +MY+KC I
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
K+ + + W+ +I+A G HG EE F++M +KP VTF+S+L+ACS
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG-IKPGHVTFVSLLTACS 677
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H GLV++G+ +D++ + L P EH ++DLLGR G L A I+ MPM+ VW
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
+LL +C IH N+ G AA+NL L+P Y L SN++ W + +R +
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+KK S V+LK++V SF DR H ++ +I+ L + ++E Y
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 846
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 240/494 (48%), Gaps = 7/494 (1%)
Query: 6 RPDSHTVSIALKSC-VGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+P S ++ + +C G +HGF+ K L D++V +A++ LY G ++ +
Sbjct: 55 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 114
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF E P +VV WTS++ GY G PE + + M E V + ++ S+C L
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG-EGVGCNENSMSLVISSCGLL 173
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
D LGR I G V + GL++ L++ NSL+++ G G++ A +F +M ++D ISW+S+
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
A YA NG + +F+ M E N T+ + L + + GR IH L V GF+
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
V L+ MY A +F ++P KD+++W L + G + ++ + C+M
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+S G + V L A ++ LH V SG N+ IG +L+ MY K +
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ +V M +DVV W+++I Y ++AL F Q + N +T +S+LSA
Sbjct: 414 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSA 472
Query: 425 CSHAG-LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
C G L+E G + +V+ D ++ + + G+L + D+ N + +
Sbjct: 473 CLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NI 530
Query: 484 HVWGALLGACHIHH 497
W A+L A + HH
Sbjct: 531 ITWNAMLAA-NAHH 543
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 218/441 (49%), Gaps = 5/441 (1%)
Query: 53 LYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV 112
+Y+K G + A +F P + V W ++++G R G + FF +M L + P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSF 59
Query: 113 TLVSAASACAQL-SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFRE 171
+ S +AC + S + G +HGFV + GL + + ++ ++L+LYG G + + +F E
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
MPD++V+SW+S++ Y+D G +D++ M + + N ++ + +C G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 232 RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAET 291
R+I V G E + V +L+ M + + A IF+++ ++D ++W + YA+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G +S +F M ++ + +L+ + + + +H V K GFD+ +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDL 411
+L+ MYA AN VF+ M KD++ W+S++A++ G+ +AL L M + S
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGK 358
Query: 412 KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
N VTF S L+AC E+G + ++V L + +V + G++GE+ +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 472 DIINNMPMQAGPHVWGALLGA 492
++ MP + W AL+G
Sbjct: 418 RVLLQMP-RRDVVAWNALIGG 437
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 324/606 (53%), Gaps = 10/606 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T+ L C +++ +G+ +HG+ K LD ++ + +AL+++YSKCG + +A +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM-AVLEEVSPDPVTLVSAASACAQLS 125
F +VV W ++V G+ G +M A E+V D VT+++A C S
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ +H + + + +AN+ + Y K GS+ A+ +F + K V SW++++
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+A + +LD +M + P+ T+ S L AC+ L G+++H + E
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ V +++ +Y+ C +F+ + K +V+W + GY + G +++ VF M+
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
G++ ++++ + A S L L+ HA+ K +++ +I SLI+MYAK SI
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
++KVF G+ K W+++I YG HG +EA+KLF +M + P+ +TF+ +L+AC
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM-QRTGHNPDDLTFLGVLTAC 708
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII-NNMPMQAGPH 484
+H+GL+ EG+ D M + + L P+ +HY ++D+LGR G+LD+AL ++ M +A
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+W +LL +C IH N++MGE A LF L+P Y LLSN+Y W + K+R +
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY-------EH 597
E L+K G S +EL +V SFV +RF D ++I + L++K+ + Y +H
Sbjct: 829 EMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQH 888
Query: 598 QLKIEE 603
L EE
Sbjct: 889 DLSEEE 894
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 253/497 (50%), Gaps = 12/497 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T +K+C G+ + +G +HG + K L D+FVG+AL+ Y G + DA+++
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-----VSPDPVTLVSAASAC 121
F P+ ++V W S++ + +G E + M +EE PD TLV+ C
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFMPDVATLVTVLPVC 302
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
A+ + LG+ +HG+ + LD L L N+L+++Y K G I +A+++F+ +K+V+SW+
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 182 SMLACYADNGAATNALDLFNEMI--DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
+M+ ++ G D+ +M+ + ++ + VT+++A+ C S+L +++H ++
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
F V+ A + Y KC S A +F+ I K V +W L GG+A++ S++
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
M G+ PD+ + +L+A S+L L+ +H F+ ++ + + ++ S++ +Y
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 542
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
C + +F M K +V W+++I Y +G + AL +F QM + ++ ++ +
Sbjct: 543 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-IQLCGISMM 601
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
+ ACS + G + K+ L D+ ++D+ + G + ++ + N +
Sbjct: 602 PVFGACSLLPSLRLGREAHAYAL-KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 480 QAGPHVWGALLGACHIH 496
++ W A++ IH
Sbjct: 661 KSTAS-WNAMIMGYGIH 676
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 211/430 (49%), Gaps = 8/430 (1%)
Query: 23 QKLEVGRMIHGFLK-KENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSI 81
+ +E+GR IH + L D + + +I +Y+ CG +D+ VF ++ W ++
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 82 VTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCG 141
++ Y R+ + L F M ++ PD T ACA +SD +G ++HG V + G
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 142 LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFN 201
L + + N+L++ YG G + A LF MP+++++SW+SM+ ++DNG + + L
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 202 EMI----DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY 257
EM+ D P+ TLV+ L CA + G+ +H AV + E ++ ALMDMY
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG--VRPDAVA 315
KC NA IF K+VV+W + GG++ G H + +V ML+ G V+ D V
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA 375
++ + L LH + K F NE + + + YAKC S+ A +VF G+
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGI 435
K V W+++I + +L QM S L P+ T S+LSACS + G
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 436 TIFDIMVNKY 445
+ ++ +
Sbjct: 517 EVHGFIIRNW 526
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 209/422 (49%), Gaps = 4/422 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+ D T+ A+ C L + +H + K+ + V +A + Y+KCG ++ A
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF V W +++ G+ +S P L+L +M + + PD T+ S SAC++L
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLK 510
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+LG+ +HGF+ R L+ L + S+L+LY G + + + LF M DK ++SW++++
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVIT 570
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y NG AL +F +M+ I+ ++++ AC+ L GR+ H A+ + E
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED 630
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ ++ +L+DMY K S + +FN + +K +W + GY G+A +++++F M
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ 690
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
G PD + + +LTA + G++ + + L + G N A +I+M + +
Sbjct: 691 RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 750
Query: 365 DNANKVF-RGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
D A +V M+ + DV IW S++++ H E K+ ++ KP +S L
Sbjct: 751 DKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNL 810
Query: 423 SA 424
A
Sbjct: 811 YA 812
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 219 LRACASASYLEEGRKIHQL-AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
L+A +E GRKIHQL + S + + T ++ MY C SP+++ +F+ + K+
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVA---LVKILTAISELGVLQQAV 333
+ W + Y+ + + +E F M+S + PD ++K +S++G+ +
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI---GL 207
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
+H V K+G + ++G +L+ Y + +A ++F M +++V W+S+I + +G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 394 QGEEALKLFYQMANHSD---LKPNKVTFISILSACSH 427
EE+ L +M + P+ T +++L C+
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 306/559 (54%), Gaps = 10/559 (1%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
H+ ++ TV+ + +C + +H ++ K D V +ALI +YSK G+++
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 62 DAVEVFMEY---PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA 118
+ +VF + + ++V ++T + +S P A+ F+RM + E + D ++ S
Sbjct: 404 LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLL 460
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
S L+ LG+ +HG+ + GL L++ +SL LY K GS++ + LF+ +P KD
Sbjct: 461 SVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W+SM++ + + G A+ LF+EM+D P+ TL + L C+S L G++IH
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ G + + +AL++MY KC S + A +++R+P+ D V+ + L GY++ G+
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
+F +M+ G D+ A+ IL A + +HA++TK G +G+SL+ MY
Sbjct: 638 LLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+K SID+ K F + D++ W+++IA+Y HG+ EAL++ Y + KP+KVTF
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQV-YNLMKEKGFKPDKVTF 756
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+ +LSACSH GLVEE + MV Y + P++ HY MVD LGR G L A INNM
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 479 MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAK 538
++ VWG LL AC IH +++G+VAAK L+P+ AG Y LSNI W +
Sbjct: 817 IKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEE 876
Query: 539 LRSLIKENRLKKVLGQSMV 557
R L+K ++K G S V
Sbjct: 877 TRKLMKGTGVQKEPGWSSV 895
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 246/499 (49%), Gaps = 23/499 (4%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PDS+T S L +C L+KL G+++ + K + D+FV +A+++LY+KCG M +A+E
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAME 306
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P P VV WT +++GY +S AL F M V + T+ S SAC + S
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPS 365
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD---KDVISWSS 182
+H +V + G S+A +L+++Y K+G I +E +F ++ D ++++ +
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
M+ ++ + A+ LF M+ + + + ++ S L L G+++H + G
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSG 480
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
L+ TV ++L +Y KC S E + +F IP KD WA + G+ E G +++ +F
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
ML DG PD L +LT S L + +H + ++G D +G++L+ MY+KC
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
S+ A +V+ + D V SS+I+ Y HG ++ LF M S + SIL
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV-MSGFTMDSFAISSIL 659
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD---RALDIINNMPM 479
A + + G + + K L + ++ + + G +D +A IN
Sbjct: 660 KAAALSDESSLGAQV-HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN---- 714
Query: 480 QAGPHV--WGALLGACHIH 496
GP + W AL+ + H
Sbjct: 715 --GPDLIAWTALIASYAQH 731
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 227/460 (49%), Gaps = 13/460 (2%)
Query: 34 FLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPEL 93
L++ L D+F+ +L+ YS G M DA ++F P+PDVV +++GY++ E
Sbjct: 74 LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEE 133
Query: 94 ALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
+L FFS+M L + ++ S SAC+ L + + G + + ++L+
Sbjct: 134 SLRFFSKMHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALI 192
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
+++ K + A +FR+ +V W++++A N DLF+EM +P+
Sbjct: 193 DVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSY 252
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T S L ACAS L G+ + + G E + V TA++D+Y KC A+++F+RI
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRI 311
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P VV+W V+ GY ++ A ++E+F M GV + + +++A ++ +A
Sbjct: 312 PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEAS 371
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM-AYKDVVIWSSIIAAYGFH 392
+HA+V KSGF + + A+LI MY+K ID + +VF + + I + +I ++
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQS 431
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSA--CSHAGLVEEGITIFDIMVNKYQLMPD 450
+ +A++LF +M L+ ++ + S+LS C + G G T+ K L+ D
Sbjct: 432 KKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLD 484
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
+ L + G L+ + + +P + W +++
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMI 523
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 314/590 (53%), Gaps = 6/590 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T + L + V + L +G+ +H K LD + V ++LI +Y K + A VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLE-EVSPDPVTLVSAASACAQLSD 126
+ D++ W S++ G ++G A+ F M +L + PD T+ S A + L +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 127 S-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
L + +H + + ++ +L++ Y + +K AEILF E + D+++W++M+A
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMA 490
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y + L LF M + + TL + + C + +G+++H A+ G++L
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ VS+ ++DMY+KC A F+ IP D VAW + G E G ++ VF M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
GV PD + + A S L L+Q +HA K N+ ++G SL++MYAKC SID
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+A +F+ + ++ W++++ HG+G+E L+LF QM + +KP+KVTFI +LSAC
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSAC 729
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SH+GLV E M Y + P+ EHY + D LGR G + +A ++I +M M+A +
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
+ LL AC + + + G+ A L L+P + Y LLSN+Y W R+++K
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 546 NRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+++KK G S +E+KN++H FV DR + +++ I+ ++ + +++E Y
Sbjct: 850 HKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGY 899
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 220/486 (45%), Gaps = 42/486 (8%)
Query: 11 TVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
T+S LK C+ + HG+ K LDGD FV AL+ +Y K G++ + +F E
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
P DVVLW ++ Y G E A+ S ++P+ +TL A SD+
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS-SGLNPNEITLRLLARISGDDSDA--- 262
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
G VK S AN G S S EI+FR + L+ Y +
Sbjct: 263 ----GQVK--------SFAN------GNDASSVS-EIIFR----------NKGLSEYLHS 293
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
G + L F +M++ +E + VT + L L G+++H +A+ G +L TVS
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
+L++MY K A +F+ + ++D+++W + G A+ G+ +++ +F +L G++
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 311 PDAVALVKILTAISELG---VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
PD + +L A S L L + V +HA + D+ ++ +LI+ Y++ + A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS--FVSTALIDAYSRNRCMKEA 471
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
+F + D+V W++++A Y G + LKLF M + + + T ++ C
Sbjct: 472 EILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGF 529
Query: 428 AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWG 487
+ +G + + + GI+ D+ + G++ A +++P+ W
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGIL-DMYVKCGDMSAAQFAFDSIPV-PDDVAWT 587
Query: 488 ALLGAC 493
++ C
Sbjct: 588 TMISGC 593
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 131/257 (50%), Gaps = 3/257 (1%)
Query: 1 MHATA-RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE 59
MH R D T++ K+C L + G+ +H + K D D++V S ++++Y KCG+
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
M+ A F P PD V WT++++G +G E A FS+M ++ V PD T+ + A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM-GVLPDEFTIATLAK 626
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
A + L+ + GR IH + + SL+++Y K GSI A LF+ + ++ +
Sbjct: 627 ASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA 686
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLA 238
W++ML A +G L LF +M I+P+ VT + L AC+ + + E K + +
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Query: 239 VSYGFELETTVSTALMD 255
YG + E + L D
Sbjct: 747 GDYGIKPEIEHYSCLAD 763
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 184/426 (43%), Gaps = 40/426 (9%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L++ + L +G+ H + + + F+ + LI +YSKCG + A VF + P D+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 76 VLWTSIVTGYERSG---TPELALAFF-SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
V W SI+ Y +S + AF R+ + V +TL C
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
S HG+ + GLD +A +L+N+Y K G +K ++LF EMP +DV+ W+ ML Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
A+DL + + PN +TL R S + ++ A
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS---DAGQVKSFA------------- 269
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
+ +A + I + ++ Y +G ++ F +M+ V
Sbjct: 270 ----------NGNDASSVSEIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVEC 313
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
D V + +L ++ L +H K G D + SLI MY K A VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
M+ +D++ W+S+IA +G EA+ LF Q+ LKP++ T S+L A S +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL-RCGLKPDQYTMTSVLKAASS---L 429
Query: 432 EEGITI 437
EG+++
Sbjct: 430 PEGLSL 435
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 294/565 (52%), Gaps = 42/565 (7%)
Query: 63 AVEVFMEYPKP-DVVLWTSIVTGYERSGTPELALAFFSRM----AVLEEVSPDPVTLVSA 117
A+ VF P P + +++ + RS P + F+ R+ L++ S P+ + A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPI--LKA 120
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
S + L + G +HG + + +++Y G I A +F EM +DV
Sbjct: 121 VSKVSALFE---GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
++W++M+ Y G A LF EM D + P+ + L + + AC + R I++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 238 AVSYGFELETTVSTALMDMYL-------------------------------KCSSPENA 266
+ ++T + TAL+ MY KC ++A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
IF++ KKD+V W + Y E+ +++ VF M G++PD V++ +++A + L
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 357
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
G+L +A +H+ + +G ++ I +LI MYAKC +D VF M ++VV WSS+I
Sbjct: 358 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 417
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
A HG+ +AL LF +M +++PN+VTF+ +L CSH+GLVEEG IF M ++Y
Sbjct: 418 NALSMHGEASDALSLFARM-KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
+ P EHYG MVDL GR L AL++I +MP+ + +WG+L+ AC IH +++G+ AA
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 507 KNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
K + L+P+H G L+SNIY ++ W + +R +++E + K G S ++ + H F
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEF 596
Query: 567 VASDRFHDESDQIFEVLRKLDVKMR 591
+ D+ H +S++I+ L ++ K++
Sbjct: 597 LIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 207/429 (48%), Gaps = 36/429 (8%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
H R D + LK+ + L G +HG K D FV + +++Y+ CG +N
Sbjct: 104 HVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRIN 163
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
A VF E DVV W +++ Y R G + A F M V PD + L + SAC
Sbjct: 164 YARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSAC 222
Query: 122 AQLSDSKLGRSIHGFV--KRCGLDTHLSLA-----------------------------N 150
+ + + R+I+ F+ +DTHL A
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 151 SLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
++++ Y K G + A+++F + KD++ W++M++ Y ++ AL +F EM I+P
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
+ V++ S + ACA+ L++ + +H G E E +++ AL++MY KC + D+F
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
++P+++VV+W+ + + G A ++ +F M + V P+ V V +L S G+++
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 331 QAVCLHAFVTK--SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIA 387
+ + A +T + E+ G +++++ + + + A +V M +VVIW S+++
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGC-MVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 388 AYGFHGQGE 396
A HG+ E
Sbjct: 522 ACRIHGELE 530
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 180/598 (30%), Positives = 318/598 (53%), Gaps = 20/598 (3%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A + D T + AL C L++G ++HG + L +F+ + LI++YSKCG+++
Sbjct: 142 ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ 201
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA---- 118
A+ +F + D V W S+++GY R G E L ++M D + L + A
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM------HRDGLNLTTYALGSV 255
Query: 119 --SACAQLSDSKL--GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+ C L++ + G +IH + + G++ + + +LL++Y K GS+K A LF MP
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS 315
Query: 175 KDVISWSSMLACYAD-----NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE 229
K+V+++++M++ + + A++ A LF +M + +EP+ T L+AC++A LE
Sbjct: 316 KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLE 375
Query: 230 EGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
GR+IH L F+ + + +AL+++Y S E+ + F K+D+ +W + +
Sbjct: 376 YGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHV 435
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
+ + ++F + S +RP+ + +++A ++ L + + KSG D
Sbjct: 436 QNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTS 495
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
+ S I MYAK ++ AN+VF + DV +S++I++ HG EAL +F M H
Sbjct: 496 VKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG 555
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
+KPN+ F+ +L AC H GLV +G+ F M N Y++ P+ +H+ +VDLLGR G L
Sbjct: 556 -IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSD 614
Query: 470 ALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCV 529
A ++I + Q P W ALL +C ++ + +G+ A+ L L+P +G Y LL NIY
Sbjct: 615 AENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYND 674
Query: 530 DKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLD 587
+A ++R L+++ +KK S + + N+ HSF +D H S I+ +L +D
Sbjct: 675 SGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 268/565 (47%), Gaps = 56/565 (9%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
DS I ++ + +G++ HG + K +L+ +++ + L+ +Y KC E+ A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFF--SRMAVLEEVSPDPVTLVSAASACAQLS 125
P+ +++ + S+++GY + G E A+ F +R A L+ D T A C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLK---LDKFTYAGALGFCGERC 162
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D LG +HG V GL + L N L+++Y K G + A LF ++D +SW+S+++
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA---SASYLEEGRKIHQLAVSYG 242
Y GAA L+L +M + L S L+AC + ++E+G IH G
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG-----MAHKS 297
E + V TAL+DMY K S + A+ +F+ +P K+VV + + G+ + + ++
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
++F +M G+ P +L A S L+ +HA + K+ F ++E+IG++LIE+
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
YA S ++ + F + +D+ W+S+I + + Q E A LF Q+ + S ++P + T
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS-SHIRPEEYT 461
Query: 418 FISILSACS-HAGL----------VEEGITIFDIMVNKYQLM------------------ 448
++SAC+ A L ++ GI F + M
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 449 -PDSEHYGIMVDLLGRMGELDRALDIINNM------PMQAGPHVWGALLGACH---IHHN 498
PD Y M+ L + G + AL+I +M P Q G L+ CH +
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQA--FLGVLIACCHGGLVTQG 579
Query: 499 IKMGEVAAKNLFPLDPNHAGYYTLL 523
+K + KN + ++PN + L+
Sbjct: 580 LKYFQ-CMKNDYRINPNEKHFTCLV 603
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 298/563 (52%), Gaps = 2/563 (0%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERS 88
+ IH L +L D F+ + L++ + + +F P++ L+ S++ G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSL 148
L F + + T AC + S KLG +H V +CG + ++
Sbjct: 90 HLFHETLDLFLSIRK-HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
SLL++Y +G + A LF E+PD+ V++W+++ + Y +G A+DLF +M++ +
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+P+ +V L AC L+ G I + + + V T L+++Y KC E A
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F+ + +KD+V W+ + GYA + +E+F ML + ++PD ++V L++ + LG
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L + + + F N ++ +LI+MYAKC ++ +VF+ M KD+VI ++ I+
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
+G + + +F Q + P+ TF+ +L C HAGL+++G+ F+ + Y L
Sbjct: 389 LAKNGHVKLSFAVFGQ-TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
EHYG MVDL GR G LD A +I +MPM+ VWGALL C + + ++ E K
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKE 507
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
L L+P +AG Y LSNIY V W AA++R ++ + +KK+ G S +EL+ +VH F+A
Sbjct: 508 LIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLA 567
Query: 569 SDRFHDESDQIFEVLRKLDVKMR 591
D+ H SD+I+ L L +MR
Sbjct: 568 DDKSHPLSDKIYAKLEDLGNEMR 590
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 190/386 (49%), Gaps = 15/386 (3%)
Query: 11 TVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
T + LK+C ++G +H + K + D+ ++L+ +YS G +NDA ++F E
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
P VV WT++ +GY SG A+ F +M + V PD +V SAC + D G
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
I +++ + + + +L+NLY K G ++ A +F M +KD+++WS+M+ YA N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
++LF +M+ + ++P+ ++V L +CAS L+ G L + F ++
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
AL+DMY KC + ++F + +KD+V G A+ G S VF G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 311 PDAVALVKILTAISELGVLQQAV-------CLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
PD + +L G++Q + C++A E+ G +++++ +
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTV-----EHYGC-MVDLWGRAGM 465
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAA 388
+D+A ++ M + + ++W ++++
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 148/285 (51%), Gaps = 5/285 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PDS+ + L +CV + L+ G I ++++ + + FV + L+ LY+KCG+M A
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + D+V W++++ GY + P+ + F +M + E + PD ++V S+CA L
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSIVGFLSSCASLG 327
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
LG + R T+L +AN+L+++Y K G++ +F+EM +KD++ ++ ++
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
A NG + +F + I P+ T + L C A +++G + A+S + L
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYAL 446
Query: 246 ETTVS--TALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
+ TV ++D++ + ++A + +P + + + W L G
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 318/589 (53%), Gaps = 7/589 (1%)
Query: 9 SHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFM 68
+H S L+ C+ + + + I + K ++ GS L++ KCG+++ A +VF
Sbjct: 65 THNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFD 123
Query: 69 EYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
+ +V W S++ + + A+ + R+ + V PD TL S A + LS K
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMY-RLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 129 LGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+ HG GL+ +++ + ++L+++Y K G + A+++ + +KDV+ ++++ Y
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+ G T A+ F M+ ++++PN T S L +C + + G+ IH L V GFE
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
T+L+ MYL+CS ++++ +F I + V+W L G + G ++ F M+ D
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
++P++ L L S L + ++ +H VTK GFD ++Y G+ LI++Y KC D A
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
VF ++ DV+ +++I +Y +G G EAL LF +M N L+PN VT +S+L AC++
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG-LQPNDVTVLSVLLACNN 481
Query: 428 AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWG 487
+ LVEEG +FD K ++M ++HY MVDLLGR G L+ A +++ + +W
Sbjct: 482 SRLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 488 ALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENR 547
LL AC +H ++M E + + ++P G L+SN+Y W+ +++S +K+ +
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 548 LKKVLGQSMVELKNEVHSFVASDRF-HDESDQIFEVLRKLDVKMREECY 595
LKK S VE+ E H+F+A D F H S+QI E L +L K ++ Y
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGY 648
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 150/280 (53%), Gaps = 1/280 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ +T + L SC L+ + G++IHG + K + + ++L+ +Y +C ++D++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P+ V WTS+++G ++G E+AL F +M + + + P+ TL SA C+ L+
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLA 382
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ GR IHG V + G D + L++LYGK G A ++F + + DVIS ++M+
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
YA NG ALDLF MI+ ++PN VT++S L AC ++ +EEG ++ L
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIML 502
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
++D+ + E A + + D+V W L
Sbjct: 503 TNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLL 542
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + +P+S T+S AL+ C L E GR IHG + K D D + GS LI+LY KCG
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A VF + DV+ +++ Y ++G AL F RM L + P+ VT++S A
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL-GLQPNDVTVLSVLLA 478
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANS----LLNLYGKTGSIKSAEILFREMPDKD 176
C + G + ++ + L N +++L G+ G ++ AE+L E+ + D
Sbjct: 479 CNNSRLVEEGCELFDSFRK----DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPD 534
Query: 177 VISWSSML-AC 186
++ W ++L AC
Sbjct: 535 LVLWRTLLSAC 545
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 321/587 (54%), Gaps = 21/587 (3%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
LK C+ + +L R I + +++ F+ +EL G+ N + +F +P+
Sbjct: 44 LKKCISVNQL---RQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPNH 96
Query: 76 VLWTSIVTGYERSGTP-ELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIH 134
+ ++ G + E AL+ + RM + PD T ACA+L + +GRS+H
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMK-FSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 135 GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAAT 194
+ + GL+ + + +SL+ +Y K G + A LF E+ ++D +SW+SM++ Y++ G A
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM 254
+A+DLF +M ++ EP+ TLVS L AC+ L GR + ++A++ L T + + L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 255 DMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAV 314
MY KC ++A +FN++ KKD VAW + Y++ G + ++ ++F M GV PDA
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
Query: 315 ALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM 374
L +L+A +G L+ + ++ +N Y+ L++MY KC ++ A +VF M
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Query: 375 AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
K+ W+++I AY G +EAL LF +M+ + P+ +TFI +LSAC HAGLV +G
Sbjct: 396 PVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACVHAGLVHQG 451
Query: 435 ITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACH 494
F M + + L+P EHY ++DLL R G LD A + + P + + A+LGACH
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
Query: 495 IHHNIKMGEVAAKNLFPL-DPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLG 553
++ + E A + L + + +AG Y + SN+ K W +AK+R+L+++ + K G
Sbjct: 512 KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPG 571
Query: 554 QSMVELKNEVHSFVASDRF----HDESDQIFEVLRKLDVKMREECYE 596
S +E++ E+ F+A + ++S +F++L + +M+ E YE
Sbjct: 572 CSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVE---EMKRERYE 615
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 176/329 (53%), Gaps = 8/329 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T + +C L+++ VGR +H L K L+ D+ + +LI +Y+KCG++ A +
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F E + D V W S+++GY +G + A+ F +M E PD TLVS AC+ L
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE-EGFEPDERTLVSMLGACSHLG 247
Query: 126 DSKLGRSIH--GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
D + GR + K+ GL T L + L+++YGK G + SA +F +M KD ++W++M
Sbjct: 248 DLRTGRLLEEMAITKKIGLSTF--LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ Y+ NG ++ A LF EM + P+ TL + L AC S LE G++I A
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ V+T L+DMY KC E A+ +F +P K+ W + YA G A +++ +F
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR 425
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQA 332
M V P + + +L+A G++ Q
Sbjct: 426 M---SVPPSDITFIGVLSACVHAGLVHQG 451
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 289/495 (58%), Gaps = 3/495 (0%)
Query: 28 GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
G IH + ++ L GD+ V ++L+ +YSKCGE+ A ++F+ DVV W++++ YE+
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS 147
+G + A++ F M + + P+ VTL S CA ++ S+LG+SIH + + +++ L
Sbjct: 379 AGQHDEAISLFRDMMRIH-IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
A +++++Y K G A F +P KD ++++++ Y G A A D++ M
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+ P+ T+V L+ CA S G ++ + +GF+ E V+ AL++M+ KC + A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 268 DIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+F++ +K V+W ++ GY G A +++ F M + +P+AV V I+ A +EL
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
L+ + +H+ + + GF + +G SL++MYAKC I+++ K F ++ K +V W++++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
+AY HG A+ LF M ++LKP+ V+F+S+LSAC HAGLVEEG IF+ M +++
Sbjct: 678 SAYAAHGLASCAVSLFLSM-QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHK 736
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
+ + EHY MVDLLG+ G A++++ M ++ VWGALL + +H N+ + A
Sbjct: 737 IEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAAL 796
Query: 507 KNLFPLDPNHAGYYT 521
L L+P + +Y+
Sbjct: 797 CQLVKLEPLNPSHYS 811
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 7/424 (1%)
Query: 22 LQKLEVGRMIHGFLKKENLDGDMFV-GSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTS 80
L+K +V R +HG + K+ G +F S LI++Y C ++ A VF E + D W +
Sbjct: 214 LEKSDVCRCLHGLVIKK---GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 81 IVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRC 140
++ Y +G E L F M + V + V SA A A + D G +IH + +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYD-VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ 329
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLF 200
GL +S+A SL+++Y K G ++ AE LF + D+DV+SWS+M+A Y G A+ LF
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLF 389
Query: 201 NEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC 260
+M+ I+PN VTL S L+ CA + G+ IH A+ E E +TA++ MY KC
Sbjct: 390 RDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 261 SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
A+ F R+P KD VA+ L GY + G A+K+ +V+ NM GV PD+ +V +L
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 321 TAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDV 379
+ + C++ + K GFD+ ++ +LI M+ KC ++ A +F + K
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFD 439
V W+ ++ Y HGQ EEA+ F QM +PN VTF++I+ A + + G+++
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQM-KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 440 IMVN 443
++
Sbjct: 629 SLIQ 632
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 241/490 (49%), Gaps = 5/490 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD ++ + ALK+C G + G IH + + L+ D+++G+AL+E+Y K ++ A +V
Sbjct: 98 PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQV 157
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + DVV W ++V+G ++G AL F M V D V+L + A ++L
Sbjct: 158 FDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSC-CVDIDHVSLYNLIPAVSKLEK 216
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
S + R +HG V + G + ++ L+++Y + +AE +F E+ KD SW +M+A
Sbjct: 217 SDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAA 274
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA NG L+LF+ M + + N V SAL+A A L +G IH AV G +
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+V+T+LM MY KC E A +F I +DVV+W+ + Y + G +++ +F +M+
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
++P+AV L +L + + + +H + K+ ++ ++I MYAKC
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A K F + KD V ++++ Y G +A ++ M H + P+ T + +L C+
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCA 513
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
G ++ ++ K+ + ++++ + L A+ + + + W
Sbjct: 514 FCSDYARGSCVYGQII-KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 487 GALLGACHIH 496
++ +H
Sbjct: 573 NIMMNGYLLH 582
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 217/431 (50%), Gaps = 4/431 (0%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP 109
LI YS + + +F P VVLW S++ GY R+G AL FF M+ + + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
D + A ACA D K G IH + GL++ + + +L+ +Y K + SA +F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 170 REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE 229
+M KDV++W++M++ A NG ++ AL LF++M ++ + V+L + + A + +
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 230 EGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
R +H L + GF S+ L+DMY C+ A +F + +KD +W + YA
Sbjct: 219 VCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
G + +E+F M + VR + VA L A + +G L + + +H + + G +
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
+ SL+ MY+KC ++ A ++F + +DVV WS++IA+Y GQ +EA+ LF M
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM-RI 395
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
+KPN VT S+L C+ G +I + K + + E ++ + + G
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI-KADIESELETATAVISMYAKCGRFSP 454
Query: 470 ALDIINNMPMQ 480
AL +P++
Sbjct: 455 ALKAFERLPIK 465
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 204/406 (50%), Gaps = 26/406 (6%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M +P++ T++ L+ C G+ +G+ IH + K +++ ++ +A+I +Y+KCG
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRF 452
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A++ F P D V + ++ GY + G A + M L V PD T+V
Sbjct: 453 SPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK-LHGVCPDSRTMVGMLQT 511
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVIS 179
CA SD G ++G + + G D+ +A++L+N++ K ++ +A +LF + +K +S
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W+ M+ Y +G A A+ F +M ++ +PN VT V+ +RA A S L G +H +
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
GF +T V +L+DMY KC E++ F I K +V+W + YA G+A ++
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVS 691
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG-------- 351
+F +M + ++PD+V+ + +L+A C HA + + G E +G
Sbjct: 692 LFLSMQENELKPDSVSFLSVLSA-----------CRHAGLVEEGKRIFEEMGERHKIEAE 740
Query: 352 ----ASLIEMYAKCSSIDNANKVFRGMAYKDVV-IWSSIIAAYGFH 392
A ++++ K A ++ R M K V +W +++ + H
Sbjct: 741 VEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 177/346 (51%), Gaps = 9/346 (2%)
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+HG + GL H N L+N Y + ++F + D V+ W+SM+ Y G
Sbjct: 24 VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 193 ATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
AL F M +++ I+P+ + AL+ACA + ++G +IH L G E + + T
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
AL++MY K +A +F+++ KDVV W + G A+ G + ++ +F +M S V
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
D V+L ++ A+S+L CLH V K GF + LI+MY C+ + A VF
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVF 257
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
+ KD W +++AAY +G EE L+LF M N+ D++ NKV S L A ++ G +
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY-DVRMNKVAAASALQAAAYVGDL 316
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+GI I D V + L+ D ++ + + GEL+ A + N+
Sbjct: 317 VKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 272/478 (56%), Gaps = 1/478 (0%)
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
+AC + G+ +H + + L LL YGK ++ A + EMP+K+V+
Sbjct: 60 NACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV 119
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
SW++M++ Y+ G ++ AL +F EM+ +PN T + L +C AS L G++IH L
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
V + ++ V ++L+DMY K + A +IF +P++DVV+ + GYA+ G+ +++
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
E+F + S+G+ P+ V +LTA+S L +L H V + + SLI+MY
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+KC ++ A ++F M + + W++++ Y HG G E L+LF M + +KP+ VT
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 419 ISILSACSHAGLVEEGITIFDIMV-NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+++LS CSH + + G+ IFD MV +Y P +EHYG +VD+LGR G +D A + I M
Sbjct: 360 LAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAA 537
P + V G+LLGAC +H ++ +GE + L ++P +AG Y +LSN+Y W +
Sbjct: 420 PSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVN 479
Query: 538 KLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+R+++ + + K G+S ++ + +H F A+DR H +++ ++++ +KM++ Y
Sbjct: 480 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 202/392 (51%), Gaps = 15/392 (3%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
H L +C+ + L G+ +H + K ++ + L+ Y KC + DA +V E
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
P+ +VV WT++++ Y ++G AL F+ M + + P+ T + ++C + S L
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEM-MRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G+ IHG + + D+H+ + +SLL++Y K G IK A +F +P++DV+S ++++A YA
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
G AL++F+ + + + PN+VT S L A + + L+ G++ H + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG- 308
+L+DMY KC + A +F+ +P++ ++W + GY++ G+ + +E+F M +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 309 VRPDAVALVKILTAISE-------LGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
V+PDAV L+ +L+ S L + V + TK G E+ G +++M +
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA-GEYGTKPG---TEHYGC-IVDMLGRA 406
Query: 362 SSIDNANKVFRGMAYKDVV-IWSSIIAAYGFH 392
ID A + + M K + S++ A H
Sbjct: 407 GRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 153/279 (54%), Gaps = 4/279 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + +P+ T + L SC+ L +G+ IHG + K N D +FVGS+L+++Y+K G++
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+A E+F P+ DVV T+I+ GY + G E AL F R+ E +SP+ VT S +A
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS-EGMSPNYVTYASLLTA 263
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
+ L+ G+ H V R L + L NSL+++Y K G++ A LF MP++ ISW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 181 SSMLACYADNGAATNALDLFNEMID-KRIEPNWVTLVSALRACASASYLEEGRKIHQ--L 237
++ML Y+ +G L+LF M D KR++P+ VTL++ L C+ + G I +
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
A YG + T ++DM + + A + R+P K
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 153/280 (54%), Gaps = 19/280 (6%)
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
L AC L +G+++H + + T + T L+ Y KC E+A + + +P+K+V
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI---SELGVLQQAVCL 335
V+W + Y++TG + +++ VF M+ +P+ +LT+ S LG+ +Q +
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ---I 175
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG 395
H + K +D++ ++G+SL++MYAK I A ++F + +DVV ++IIA Y G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 396 EEALKLFYQMANHSD-LKPNKVTFISILSACSHAGLVEEGITIFDIMVNK----YQLMPD 450
EEAL++F+++ HS+ + PN VT+ S+L+A S L++ G ++ + Y ++ +
Sbjct: 236 EEALEMFHRL--HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
S ++D+ + G L A + +NMP + W A+L
Sbjct: 294 S-----LIDMYSKCGNLSYARRLFDNMPERTAIS-WNAML 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 319 ILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
+L A + L+ +HA + K+ + Y+ L+ Y KC +++A KV M K+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 379 VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIF 438
VV W+++I+ Y G EAL +F +M SD KPN+ TF ++L++C A + G I
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 439 DIMVNKYQLMPDSEHY--GIMVDLLGRMGELDRALDIINNMP 478
++V K+ DS + ++D+ + G++ A +I +P
Sbjct: 177 GLIV-KWNY--DSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 276/488 (56%), Gaps = 5/488 (1%)
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA+ ++ HG + R L+ ++L N L+N Y K G ++ A +F M ++ ++SW
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++M+ Y N + ALD+F EM ++ + + T+ S L AC E +K+H L+V
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+L V TAL+D+Y KC ++AV +F + K V W+ + GY + +++ +
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
+ + + L ++ A S L L + +HA + KSGF +N ++ +S ++MYAK
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
C S+ + +F + K++ +W++II+ + H + +E + LF +M + PN+VTF S
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM-QQDGMHPNEVTFSS 369
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
+LS C H GLVEEG F +M Y L P+ HY MVD+LGR G L A ++I ++P
Sbjct: 370 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 429
Query: 481 AGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLR 540
+WG+LL +C ++ N+++ EVAA+ LF L+P +AG + LLSNIY +K W AK R
Sbjct: 430 PTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSR 489
Query: 541 SLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY----E 596
L+++ +KKV G+S +++K++VH+F + H +I L L +K R+ Y E
Sbjct: 490 KLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVE 549
Query: 597 HQLKIEEV 604
H+L E+
Sbjct: 550 HELHDVEI 557
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 178/363 (49%), Gaps = 3/363 (0%)
Query: 28 GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
+ HG + + +L+GD+ + + LI YSKCG + A +VF + +V W +++ Y R
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS 147
+ AL F M E T+ S SAC D+ + +H + +D +L
Sbjct: 140 NRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
+ +LL+LY K G IK A +F M DK ++WSSM+A Y N AL L+
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+E N TL S + AC++ + L EG+++H + GF V+++ +DMY KC S +
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
IF+ + +K++ W + G+A+ + M +F M DG+ P+ V +L+ G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 328 VLQQAVCLHAFV-TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV-IWSSI 385
++++ + T G N + ++++ + + A ++ + + + IW S+
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 386 IAA 388
+A+
Sbjct: 439 LAS 441
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
+ T+S + +C L L G+ +H + K ++FV S+ +++Y+KCG + ++ +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E + ++ LW +I++G+ + P+ + F +M + + P+ VT S S C
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLV 380
Query: 128 KLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSMLA 185
+ GR ++ GL ++ + ++++ G+ G + A L + +P D W S+LA
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
+IL + G + +A H + + + + + LI Y+KC ++ A +VF GM +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+V W+++I Y + EAL +F +M N K ++ T S+LSAC
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSAC 172
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/616 (30%), Positives = 303/616 (49%), Gaps = 24/616 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMF--VGSALIELYSKCGEMNDAV 64
PD T + L C +H F K D + F V + L++ Y + ++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F E P+ D V + +++TGYE+ G ++ F +M P T A L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGL 263
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
D LG+ +H G S+ N +L+ Y K + +LF EMP+ D +S++ ++
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 185 ACYADNGAATNALDLFNEM----IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+ Y+ +L F EM D+R P + L A+ S L+ GR++H A+
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFP----FATMLSIAANLSSLQMGRQLHCQALL 379
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+ V +L+DMY KC E A IF +P++ V+W L GY + G+ +++
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
F M +R D +L A + L LHAF+ +SG N + G+ L++MYAK
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
C SI +A +VF M ++ V W+++I+A+ +G GE A+ F +M S L+P+ V+ +
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVSILG 558
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
+L+ACSH G VE+G F M Y + P +HY M+DLLGR G A +++ MP +
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 481 AGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDP-NHAGYYTLLSNIYCVDKNWHNAAKL 539
+W ++L AC IH N + E AA+ LF ++ A Y +SNIY W +
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 540 RSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY---- 595
+ ++E +KKV S VE+ +++H F ++D+ H D+I + +L ++ E Y
Sbjct: 679 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDT 738
Query: 596 -------EHQLKIEEV 604
+ Q+KIE +
Sbjct: 739 SSVVQDVDEQMKIESL 754
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 199/411 (48%), Gaps = 8/411 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P T S LK+ VGL +G+ +H D VG+ +++ YSK + +
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRM 306
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F E P+ D V + +++ Y ++ E +L FF M + + S A LS
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM-GFDRRNFPFATMLSIAANLS 365
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++GR +H D+ L + NSL+++Y K + AE++F+ +P + +SW+++++
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y G L LF +M + + T + L+A AS + L G+++H + G L
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NL 484
Query: 246 ETTVS-TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
E S + L+DMY KC S ++AV +F +P ++ V+W L +A+ G ++ F M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+ G++PD+V+++ +LTA S G ++Q A G + A ++++ +
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQMANHSD 410
A K+ M ++ D ++WSS++ A H E A + + M D
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 218/464 (46%), Gaps = 15/464 (3%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEV 107
+ +I + K G+++ A ++F P VV WT ++ Y R+ + A F +M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 108 S-PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTH--LSLANSLLNLYGKTGSIKS 164
+ PD VT + C +H F + G DT+ L+++N LL Y + +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
A +LF E+P+KD +++++++ Y +G T ++ LF +M +P+ T L+A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
G+++H L+V+ GF + +V ++D Y K +F+ +P+ D V++ V+
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
Y++ S+ F M G +L+ + L LQ LH +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY---GFHGQGEEALKL 401
D+ ++G SL++MYAKC + A +F+ + + V W+++I+ Y G HG G LKL
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKL 439
Query: 402 FYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLL 461
F +M S+L+ ++ TF ++L A + + G + ++ L G +VD+
Sbjct: 440 FTKMRG-SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMY 497
Query: 462 GRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVA 505
+ G + A+ + MP + W AL+ A H + GE A
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVS-WNALISA---HADNGDGEAA 537
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 35/310 (11%)
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
R + + + G DT +N ++ + G + +A ++ EMP K+ +S ++M++ +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 191 GAATNALDLFNEMIDKRIE---------------------------------PNWVTLVS 217
G ++A DLF+ M D+ + P+ VT +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELET--TVSTALMDMYLKCSSPENAVDIFNRIPK 275
L C A ++H AV GF+ TVS L+ Y + + A +F IP+
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 276 KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
KD V + L GY + G+ +S+ +F M G +P +L A+ L L
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG 395
HA +GF + +G +++ Y+K + +F M D V ++ +I++Y Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 396 EEALKLFYQM 405
E +L F +M
Sbjct: 333 EASLHFFREM 342
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 323/591 (54%), Gaps = 15/591 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P++ T+ + + +C L G IHG++ + G V ++++ +Y+ ++ A ++
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E + DV+ W+ ++ Y +S P + L F M + PD VT+ S AC + D
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 127 SKLGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+GRS+HGF R G D + + NSL+++Y K + SA +F E ++++SW+S+LA
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ N AL++F+ M+ + +E + VT+VS LR C + IH + + G+E
Sbjct: 302 GFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYES 361
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
++L+D Y CS ++A + + + KDVV+ + + G A G + +++ +FC+M
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY-IGASLIEMYAKCSSI 364
P+A+ ++ +L A S L+ + H + N+ +G S+++ YAKC +I
Sbjct: 422 D---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAI 478
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ A + F + K+++ W+ II+AY +G ++AL LF +M PN VT+++ LSA
Sbjct: 479 EMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM-KQKGYTPNAVTYLAALSA 537
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP--MQAG 482
C+H GLV++G+ IF MV + P +HY +VD+L R GE+D A+++I N+P ++AG
Sbjct: 538 CNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAG 596
Query: 483 PHVWGALLGACHIHHN--IKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLR 540
WGA+L C I EV A+ + L+P + Y L S+ + +K+W + A +R
Sbjct: 597 ASAWGAILSGCRNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMR 655
Query: 541 SLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMR 591
L+KE +++ V G SMV N F+A D+ ++ +V++ L M+
Sbjct: 656 RLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 217/429 (50%), Gaps = 10/429 (2%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+F G+++ + Y KCG++ + F D V W IV G G E L +FS++ V
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
P+ TLV AC L G IHG+V R G S+ NS+L +Y + S+
Sbjct: 121 W-GFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 164 SAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRAC 222
SA LF EM ++DVISWS ++ Y + L LF EM+ + + EP+ VT+ S L+AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 223 ASASYLEEGRKIHQLAVSYGFEL-ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
++ GR +H ++ GF+L + V +L+DMY K ++A +F+ +++V+W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
+ G+ +++E+F M+ + V D V +V +L +H + +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKL 401
G+++NE +SLI+ Y CS +D+A V M YKDVV S++I+ G+ +EA+ +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 402 FYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLL 461
F M + PN +T IS+L+ACS + + I + + + D +VD
Sbjct: 417 FCHMRD----TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 462 GRMGELDRA 470
+ G ++ A
Sbjct: 473 AKCGAIEMA 481
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 199/375 (53%), Gaps = 6/375 (1%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGEM 60
A PD TV+ LK+C ++ ++VGR +HGF + D D+FV ++LI++YSK ++
Sbjct: 219 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A VF E ++V W SI+ G+ + + AL F M V E V D VT+VS
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM-VQEAVEVDEVTVVSLLRV 337
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
C +SIHG + R G +++ +SL++ Y + A + M KDV+S
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC 397
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
S+M++ A G + A+ +F M D PN +T++S L AC+ ++ L + H +A+
Sbjct: 398 STMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIR 454
Query: 241 YGFEL-ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
+ + +V T+++D Y KC + E A F++I +K++++W V+ YA G+ K++
Sbjct: 455 RSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALA 514
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
+F M G P+AV + L+A + G++++ + + + + + + +++M +
Sbjct: 515 LFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLS 574
Query: 360 KCSSIDNANKVFRGM 374
+ ID A ++ + +
Sbjct: 575 RAGEIDTAVELIKNL 589
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 46/405 (11%)
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNAL 197
K C + L NS+ + Y K G + S F M +D +SW+ ++ D G L
Sbjct: 53 KACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGL 112
Query: 198 DLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY 257
F+++ EPN TLV + AC S + +G KIH + GF ++V +++ MY
Sbjct: 113 WWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMY 170
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVAL 316
S +A +F+ + ++DV++W+V+ Y ++ +++F M+ + PD V +
Sbjct: 171 AD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFD-NNEYIGASLIEMYAKCSSIDNANKVFRGMA 375
+L A + + + +H F + GFD + ++ SLI+MY+K +D+A +VF
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC---------- 425
+++V W+SI+A + + + +EAL++F+ M + ++ ++VT +S+L C
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLRVCKFFEQPLPCK 348
Query: 426 -------------------------SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
+ LV++ T+ D M K D M+
Sbjct: 349 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK-----DVVSCSTMISG 403
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVA 505
L G D A+ I +M +LL AC + +++ + A
Sbjct: 404 LAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 307/605 (50%), Gaps = 42/605 (6%)
Query: 22 LQKLEVGRMIHGFLKKENLDGDMFVGSALIEL--YSKCGEMNDAVEVFMEYPKPDVVLWT 79
L++++ +I+G + D F S LI S+ ++ +V++ P++ W
Sbjct: 69 LKQIQAQMIINGLIL------DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWN 122
Query: 80 SIVTGYERSGTPELALAFFSRMAV--LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
+ G+ S P+ + + +M E PD T CA L S LG I G V
Sbjct: 123 VTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNAL 197
+ L+ + N+ ++++ G +++A +F E P +D++SW+ ++ Y G A A+
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 198 DLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY 257
++ M + ++P+ VT++ + +C+ L G++ ++ G + + ALMDM+
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGM------------------------ 293
KC A IF+ + K+ +V+W + GYA G+
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 294 -------AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
++ +F M + +PD + ++ L+A S+LG L + +H ++ K
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA 406
N +G SL++MYAKC +I A VF G+ ++ + +++II HG A+ F +M
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 407 NHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
+ + + P+++TFI +LSAC H G+++ G F M +++ L P +HY IMVDLLGR G
Sbjct: 483 D-AGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 467 LDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNI 526
L+ A ++ +MPM+A VWGALL C +H N+++GE AAK L LDP+ +G Y LL +
Sbjct: 542 LEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 527 YCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKL 586
Y W +A + R ++ E ++K+ G S +E+ V F+ D+ ES++I++ L L
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Query: 587 DVKMR 591
MR
Sbjct: 662 GRHMR 666
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 213/438 (48%), Gaps = 39/438 (8%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+RPD T + K C L+ +G MI G + K L+ V +A I +++ CG+M +A
Sbjct: 152 SRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+VF E P D+V W ++ GY++ G E A+ + M E V PD VT++ S+C+ L
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES-EGVKPDDVTMIGLVSSCSML 270
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
D G+ + +VK GL + L N+L++++ K G I A +F + + ++SW++M+
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 185 ACYADNG-------------------------------AATNALDLFNEMIDKRIEPNWV 213
+ YA G +AL LF EM +P+ +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T++ L AC+ L+ G IH+ Y L + T+L+DMY KC + A+ +F+ I
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
++ + + + GG A G A ++ F M+ G+ PD + + +L+A G++Q
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 334 CLHAFVTKSGFDNNEYIG--ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYG 390
+ + KS F+ N + + ++++ + ++ A+++ M + D +W +++
Sbjct: 511 DYFSQM-KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCR 569
Query: 391 FHGQ---GEEALKLFYQM 405
HG GE+A K ++
Sbjct: 570 MHGNVELGEKAAKKLLEL 587
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+ +PD T+ L +C L L+VG IH +++K +L ++ +G++L+++Y+KCG +++
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A+ VF + + +T+I+ G G A+++F+ M + ++PD +T + SAC
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAPDEITFIGLLSACC 501
Query: 123 QLSDSKLGRSIHGFVK-RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
+ GR +K R L+ L + +++L G+ G ++ A+ L MP + D W
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVW 561
Query: 181 SSML 184
++L
Sbjct: 562 GALL 565
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 309/589 (52%), Gaps = 17/589 (2%)
Query: 6 RPDSHTVSI---ALKSCVGLQKLEVGRMIHGFL-KKENLDGDMFVGSALIELYSKCGEMN 61
R + H V+ L+ C + G+ IHGF+ +K LD G++L+ +Y+KCG M
Sbjct: 54 RYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMR 113
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVS--AAS 119
AV VF + DV + ++++G+ +G+P A+ + M + PD T S S
Sbjct: 114 RAVLVFGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRA-NGILPDKYTFPSLLKGS 171
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD-VI 178
+LSD K +HG + G D+ + + L+ Y K S++ A+ +F E+PD+D +
Sbjct: 172 DAMELSDVK---KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W++++ Y+ +AL +F++M ++ + + T+ S L A + ++ GR IH LA
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA 288
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
V G + VS AL+DMY K E A IF + ++D+ W + + G ++
Sbjct: 289 VKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTL 348
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN----NEYIGASL 354
+F ML G+RPD V L +L L L+Q +H ++ SG N NE+I SL
Sbjct: 349 ALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSL 408
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
++MY KC + +A VF M KD W+ +I YG GE AL +F M + +KP+
Sbjct: 409 MDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC-RAGVKPD 467
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
++TF+ +L ACSH+G + EG M Y ++P S+HY ++D+LGR +L+ A ++
Sbjct: 468 EITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELA 527
Query: 475 NNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
+ P+ P VW ++L +C +H N + VA K L L+P H G Y L+SN+Y +
Sbjct: 528 ISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYE 587
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
+R +++ +KK G S + LKN VH+F ++ H E I + L
Sbjct: 588 EVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 306/557 (54%), Gaps = 6/557 (1%)
Query: 46 VGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLE 105
+ + LI Y + G + +A +F E P DVV WT+++TGY S A F M V +
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM-VKQ 105
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG-SIKS 164
SP+ TL S +C + G +HG V + G++ L + N+++N+Y ++++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
A ++FR++ K+ ++W++++ + G L ++ +M+ + E + A+RA AS
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
+ G++IH + GF+ V +++D+Y +C A F+ + KD++ W L
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
E + +++ +F S G P+ ++ A + + L LH + + GF
Sbjct: 286 ISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMA-YKDVVIWSSIIAAYGFHGQGEEALKLFY 403
+ N + +LI+MYAKC +I ++ +VF + +++V W+S++ YG HG G EA++LF
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 404 QMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGR 463
+M + S ++P+++ F+++LSAC HAGLVE+G+ F++M ++Y + PD + Y +VDLLGR
Sbjct: 405 KMVS-SGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 464 MGELDRALDIINNMPMQAGPHVWGALLGACHIH-HNIKMGEVAAKNLFPLDPNHAGYYTL 522
G++ A +++ MP + WGA+LGAC H HN + +AA+ + L P G Y +
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 523 LSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEV 582
LS IY + W + A++R +++ KK G S + ++N+V SF SD+ + ++ V
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 583 LRKLDVKMREECYEHQL 599
L L + RE Y +L
Sbjct: 584 LGLLIEETREAGYVPEL 600
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 205/390 (52%), Gaps = 6/390 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG-EMNDAVE 65
P+ T+S LKSC ++ L G ++HG + K ++G ++V +A++ +Y+ C M A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + + V WT+++TG+ G L + +M +LE P + A A A +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM-LLENAEVTPYCITIAVRASASID 227
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
G+ IH V + G ++L + NS+L+LY + G + A+ F EM DKD+I+W+++++
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ ++ AL +F + PN T S + ACA+ + L G+++H GF
Sbjct: 288 -ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRI-PKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
++ AL+DMY KC + ++ +F I ++++V+W + GY G +++E+F M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+S G+RPD + + +L+A G++++ + + ++ G + + I ++++ +
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
I A ++ M +K D W +I+ A H
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 172/364 (47%), Gaps = 30/364 (8%)
Query: 145 HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
H LA +L+ Y + G ++ A LF EMPD+DV++W++M+ YA + A + F+EM+
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS-SP 263
+ PN TL S L++C + L G +H + V G E V A+M+MY CS +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
E A IF I K+ V W L G+ G ++++ ML + + + A
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
+ + + +HA V K GF +N + S++++Y +C + A F M KD++ W+
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS-----------HAGLVE 432
++I+ EAL L +Q PN TF S+++AC+ H +
Sbjct: 284 TLISELE-RSDSSEAL-LMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 433 EG----ITIFDIMVNKYQL---MPDSEH-YGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
G + + + +++ Y +PDS+ +G +VD R L +M + G H
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD--------RRNLVSWTSMMIGYGSH 393
Query: 485 VWGA 488
+GA
Sbjct: 394 GYGA 397
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 289/552 (52%), Gaps = 9/552 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + T+ L C + GR +HG K L+ D V +ALI YSKC E+ A +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E V W +++ Y +SG E A+ F M + V PVT+++ SA +S
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-FEKNVEISPVTIINLLSA--HVSH 265
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
L H V +CG+ +S+ SL+ Y + G + SAE L+ ++ +S+++C
Sbjct: 266 EPL----HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA+ G A+ F++ ++ + V LV L C +S+++ G +H A+ G +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM-L 305
T V L+ MY K E + +F ++ + +++W + G ++G A + EVF M L
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+ G+ PDA+ + +L S+L L LH + ++ F+N ++ +LI+MYAKC +
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEV 501
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A VF+ + W+S+I+ Y G AL + +M LKP+++TF+ +LSAC
Sbjct: 502 QAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGVLSAC 560
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
+H G V+EG F M+ ++ + P +HY +MV LLGR AL +I M ++ V
Sbjct: 561 NHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAV 620
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
WGALL AC IH +++GE A+ +F LD + G Y L+SN+Y + W + ++R+++K+
Sbjct: 621 WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Query: 546 NRLKKVLGQSMV 557
N LG S +
Sbjct: 681 NGYDGYLGVSQI 692
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 212/430 (49%), Gaps = 11/430 (2%)
Query: 1 MHATARPDSHTVSIALKSCV---GLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKC 57
+ ++ P+ T+SI L++ KL+V + L K LD ++V ++L+ LY K
Sbjct: 40 LRSSLTPNHFTMSIFLQATTTSFNSFKLQV-EQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
G + A +F E P+ D V+W +++ GY R+G A F M + + SP TLV+
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQGFSPSATTLVNL 157
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
C Q GRS+HG + GL+ + N+L++ Y K + SAE+LFREM DK
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 217
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
+SW++M+ Y+ +G A+ +F M +K +E + VT+++ L A S +H L
Sbjct: 218 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCL 271
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS 297
V G + +V T+L+ Y +C +A ++ + +V + YAE G +
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+ F ++ DAVALV IL + + + LH + KSG + LI M
Sbjct: 332 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 391
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
Y+K ++ +F + ++ W+S+I+ G+ A ++F+QM L P+ +T
Sbjct: 392 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 451
Query: 418 FISILSACSH 427
S+L+ CS
Sbjct: 452 IASLLAGCSQ 461
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 183/362 (50%), Gaps = 11/362 (3%)
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+ + + GLD + + SLLNLY K G + SA++LF EMP++D + W++++ Y+ NG
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
+A LF M+ + P+ TLV+ L C ++ +GR +H +A G EL++ V A
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA 191
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L+ Y KC+ +A +F + K V+W + G Y+++G+ +++ VF NM V
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
V ++ +L+A V + LH V K G N+ + SL+ Y++C + +A +++
Sbjct: 252 PVTIINLLSA----HVSHEP--LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
+V +SI++ Y G + A+ +++ +K + V + IL C + ++
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAV-VYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV-WGALLG 491
G+++ + K L + ++ + + +++ L + +Q P + W +++
Sbjct: 365 IGMSLHGYAI-KSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ--LQETPLISWNSVIS 421
Query: 492 AC 493
C
Sbjct: 422 GC 423
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/626 (28%), Positives = 328/626 (52%), Gaps = 42/626 (6%)
Query: 7 PDSHTVSIALKSCVGLQK---LEVGRMIHGFL-KKENLDGDMFVGSALIELYSKCGEMND 62
P+ T++ L C + K GR IH ++ ++ L +FV ++L+ Y + G + +
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A +F D+V W ++ GY + A F + +VSPD VT++S CA
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 123 QLSDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
QL+D G+ IH ++ R L S+ N+L++ Y + G +A F M KD+ISW+
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
++L +AD+ L+L + ++++ I + VT++S L+ C + + + +++H +V
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 242 GF---ELETTVSTALMDMYLKCSSPENAVDIF---------------------------- 270
G E E + AL+D Y KC + E A IF
Sbjct: 462 GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDA 521
Query: 271 ----NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+ D+ W+++ YAE+ ++++ VF + + G+RP+ V ++ +L ++L
Sbjct: 522 QMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQL 581
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
L H ++ + G + G +L+++YAKC S+ +A VF+ A +D+V++++++
Sbjct: 582 ASLHLVRQCHGYIIRGGLGDIRLKG-TLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMV 640
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
A Y HG+G+EAL ++ M S++KP+ V ++L+AC HAGL+++G+ I+D + +
Sbjct: 641 AGYAVHGRGKEALMIYSHM-TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHG 699
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
+ P E Y VDL+ R G LD A + MP++ ++WG LL AC ++ + +G A
Sbjct: 700 MKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVA 759
Query: 507 KNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
+L + + G + L+SN+Y D W +LR+L+K+ +KK G S +E+ + + F
Sbjct: 760 NHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVF 819
Query: 567 VASDRFHDESDQIFEVLRKLDVKMRE 592
V+ D H D IF+++ L ++M+E
Sbjct: 820 VSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 196/382 (51%), Gaps = 8/382 (2%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
+K+C + L GR +HG + K V +++ +Y+KC M+D ++F + D
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
V+W ++TG S E + FF M +E P VT C +L DS G+S+H
Sbjct: 88 VVWNIVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHS 146
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSI-KSAEILFREMPDKDVISWSSMLACYADNGAAT 194
++ + GL+ + N+L+++Y K G I A F + DKDV+SW++++A +++N
Sbjct: 147 YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMA 206
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASY---LEEGRKIHQLAVSYGF-ELETTVS 250
+A F M+ + EPN+ T+ + L CAS GR+IH V + + V
Sbjct: 207 DAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC 266
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-V 309
+L+ YL+ E A +F R+ KD+V+W V+ GYA K+ ++F N++ G V
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF-DNNEYIGASLIEMYAKCSSIDNAN 368
PD+V ++ IL ++L L +H+++ + + + +G +LI YA+ A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 369 KVFRGMAYKDVVIWSSIIAAYG 390
F M+ KD++ W++I+ A+
Sbjct: 387 WAFSLMSTKDIISWNAILDAFA 408
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 225/414 (54%), Gaps = 14/414 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM-NDAV 64
+P S T +I L CV L G+ +H ++ K L+ D VG+AL+ +Y+K G + DA
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-VSPDPVTLVSAASACAQ 123
F DVV W +I+ G+ + +A AF S +L+E P+ T+ + CA
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNM--MADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 124 LSDS---KLGRSIHGF-VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
+ + + GR IH + V+R L TH+ + NSL++ Y + G I+ A LF M KD++S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 180 WSSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W+ ++A YA N A LF+ ++ K + P+ VT++S L CA + L G++IH
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 239 VSYGFELE-TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS 297
+ + + LE T+V AL+ Y + A F+ + KD+++W + +A++ +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE---YIGASL 354
+ + ++L++ + D+V ++ +L + + + +H + K+G ++E +G +L
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVI-WSSIIAAYGFHGQGEEALKLFYQMAN 407
++ YAKC +++ A+K+F G++ + ++ ++S+++ Y G ++A LF +M+
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST 530
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 7/380 (1%)
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F +L D + ACA +SD GR++HG V + G ++ S+LN+Y
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM-IDKRIEPNWVTL 215
K + + +FR+M D + W+ +L + + + F M +P+ VT
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTF 125
Query: 216 VSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP-ENAVDIFNRIP 274
L C G+ +H + G E +T V AL+ MY K +A F+ I
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA 185
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG---VLQQ 331
KDVV+W + G++E M + FC ML + P+ + +L + + +
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 332 AVCLHAFVT-KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYG 390
+H++V +S + ++ SL+ Y + I+ A +F M KD+V W+ +IA Y
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
+ + +A +LF+ + + D+ P+ VT ISIL C+ + G I ++ L+ D
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 451 SEHYGIMVDLLGRMGELDRA 470
+ ++ R G+ A
Sbjct: 366 TSVGNALISFYARFGDTSAA 385
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP++ T+ L C L L + R HG++ + L GD+ + L+++Y+KCG + A
Sbjct: 565 RPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYS 623
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + D+V++T++V GY G + AL +S M + PD V + + +AC
Sbjct: 624 VFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE-SNIKPDHVFITTMLTACCHAG 682
Query: 126 DSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ G I+ ++ G+ + ++L + G + A +MP + + W ++
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 184 L-ACYADN 190
L AC N
Sbjct: 743 LRACTTYN 750
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/685 (28%), Positives = 328/685 (47%), Gaps = 110/685 (16%)
Query: 16 LKSCVGLQK--LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKP 73
L+ C+ L++ L++ R +HG + + + LI++Y K E+N A ++F E +P
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVL----------------------------- 104
D + T++V+GY SG LA F + V
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 105 ---EEVSPDPVTLVSAASACAQLSD-SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG 160
E PD T S + A ++D K H + G S++N+L+++Y K
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 161 S----IKSAEILFREMPDKDVISWSSMLACYADNG------------------AATNA-- 196
S + SA +F E+ +KD SW++M+ Y NG A NA
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 197 ------------LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV---SY 241
L++ M+ IE + T S +RACA+A L+ G+++H + +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGY------------- 288
F + + L+ +Y KC + A IF ++P KD+V+W L GY
Sbjct: 319 SFHFDNS----LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 289 ------------------AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
AE G + +++F M +G P A + + + LG
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYG 390
HA + K GFD++ G +LI MYAKC ++ A +VFR M D V W+++IAA G
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
HG G EA+ ++ +M ++P+++T +++L+ACSHAGLV++G FD M Y++ P
Sbjct: 495 QHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF 510
++HY ++DLL R G+ A +I ++P + +W ALL C +H N+++G +AA LF
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 511 PLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD 570
L P H G Y LLSN++ W A++R L+++ +KK + S +E++ +VH+F+ D
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 571 RFHDESDQIFEVLRKLDVKMREECY 595
H E++ ++ L+ L +MR Y
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGY 698
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 37/314 (11%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
D T +++C L++G+ +H + L++E D ++L+ LY KCG+ ++A +
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE--DFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 67 FMEYPKPDVVLWTSIVTGYERS-------------------------------GTPELAL 95
F + P D+V W ++++GY S G E L
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL 155
FS M E P A +CA L G+ H + + G D+ LS N+L+ +
Sbjct: 403 KLFSCMK-REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
Y K G ++ A +FR MP D +SW++++A +G A+D++ EM+ K I P+ +TL
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 216 VSALRACASASYLEEGRK-IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
++ L AC+ A +++GRK + Y L+D+ + +A + +P
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP 581
Query: 275 KKDVVA-WAVLFGG 287
K W L G
Sbjct: 582 FKPTAEIWEALLSG 595
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + S A+KSC L G+ H L K D + G+ALI +Y+KCG + +A +V
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P D V W +++ + G A+ + M + + + PD +TL++ +AC+
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM-LKKGIRPDRITLLTVLTACSHAGL 533
Query: 127 SKLGRSIHGFVKRC-----GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS-W 180
GR ++ G D + L++L ++G AE + +P K W
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHY----ARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 181 SSMLA 185
++L+
Sbjct: 590 EALLS 594
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 310/589 (52%), Gaps = 3/589 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS TVS L + L ++ G+ +HGF K ++ + V + L+ +Y K DA V
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E D V + +++ GY + E ++ F + L++ PD +T+ S AC L D
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRD 322
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
L + I+ ++ + G ++ N L+++Y K G + +A +F M KD +SW+S+++
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y +G A+ LF M+ + + +T + + + L+ G+ +H + G ++
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+VS AL+DMY KC +++ IF+ + D V W + G ++V M
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
V PD + L + L + +H + + G+++ IG +LIEMY+KC ++N
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
+++VF M+ +DVV W+ +I AYG +G+GE+AL+ F M S + P+ V FI+I+ ACS
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-EKSGIVPDSVVFIAIIYACS 621
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H+GLV+EG+ F+ M Y++ P EHY +VDLL R ++ +A + I MP++ +W
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIW 681
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
++L AC +++ E ++ + L+P+ GY L SN Y + W + +R +K+
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+ K G S +E+ VH F + D +S+ I++ L L M +E Y
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 257/514 (50%), Gaps = 36/514 (7%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
R S +S AL S L +L R IH + LD F LI+ YS E ++
Sbjct: 3 TRVSSPFISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 65 EVFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
VF P +V LW SI+ + ++G AL F+ ++ +VSPD T S ACA
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAG 118
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
L D+++G ++ + G ++ L + N+L+++Y + G + A +F EMP +D++SW+S+
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ Y+ +G AL++++E+ + I P+ T+ S L A + +++G+ +H A+ G
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
V+ L+ MYLK P +A +F+ + +D V++ + GY + M +S+ +F
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
L D +PD + + +L A L L A ++ ++ K+GF + LI++YAKC
Sbjct: 299 NL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
+ A VF M KD V W+SII+ Y G EA+KLF M + + + +T++ ++S
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLIS 416
Query: 424 ACS-----------HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
+ H+ ++ GI I D+ V+ ++D+ + GE+ +L
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICI-DLSVS-----------NALIDMYAKCGEVGDSLK 464
Query: 473 IINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
I ++M W ++ AC ++ G+ A
Sbjct: 465 IFSSMG-TGDTVTWNTVISAC-----VRFGDFAT 492
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 298/579 (51%), Gaps = 4/579 (0%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDG---DMFVGSALIELYSKCGEMNDAVEVFMEYPK 72
LK C L +G IH L N D + ++LI LY KC E A ++F P+
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
+VV W +++ GY+ SG L F M E P+ +C+ + G+
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
HG + GL +H + N+L+ +Y A + ++P D+ +SS L+ Y + GA
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
LD+ + ++ N +T +S+LR ++ L ++H V +GF E A
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L++MY KC A +F+ +++ + Y + +++ +F M + V P+
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
+L +I+EL +L+Q LH V KSG+ N+ +G +L+ MYAK SI++A K F
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
GM ++D+V W+++I+ HG G EAL+ F +M ++ PN++TFI +L ACSH G VE
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVE 456
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
+G+ F+ ++ K+ + PD +HY +V LL + G A D + P++ W LL A
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Query: 493 CHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
C++ N ++G+ A+ PN +G Y LLSNI+ + W AK+RSL+ +KK
Sbjct: 517 CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEP 576
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMR 591
G S + ++N+ H F+A D H E I+ ++++ K++
Sbjct: 577 GVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 188/388 (48%), Gaps = 7/388 (1%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+RP+ ++ KSC ++E G+ HG K L FV + L+ +YS C +A+
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
V + P D+ +++S ++GY G + L + A E+ + +T +S+ + L
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTAN-EDFVWNNLTYLSSLRLFSNL 250
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
D L +H + R G + + +L+N+YGK G + A+ +F + +++ ++++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
Y + + AL+LF++M K + PN T L + A S L++G +H L + G+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
V AL++MY K S E+A F+ + +D+V W + G + G+ +++E F M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAF-VTKSGFDNNEYIG--ASLIEMYAKC 361
+ G P+ + + +L A S +G ++Q LH F FD I ++ + +K
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQG--LHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 362 SSIDNANKVFRGMAYK-DVVIWSSIIAA 388
+A R + DVV W +++ A
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ +T +I L S L L+ G ++HG + K + VG+AL+ +Y+K G + DA +
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F D+V W ++++G G AL F RM E+ P+ +T + AC+ +
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGF 454
Query: 127 SKLGRSIHGF---VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSS 182
+ G +H F +K+ + + ++ L K G K AE R P + DV++W +
Sbjct: 455 VEQG--LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 183 ML-ACY 187
+L ACY
Sbjct: 513 LLNACY 518
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 279/499 (55%), Gaps = 6/499 (1%)
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F S+ + + + + +L++A +C + +L R +H V + H + + L+ Y
Sbjct: 20 FLSQSSFVHSLDANVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHGFIGDQLVGCY 76
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI--EPNWVT 214
+ G AE LF EMP++D++SW+S+++ Y+ G ++ + M+ + PN VT
Sbjct: 77 LRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVT 136
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+S + AC EEGR IH L + +G E V A ++ Y K ++ +F +
Sbjct: 137 FLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS 196
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
K++V+W + + + G+A K + F G PD + +L + ++GV++ A
Sbjct: 197 IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQG 256
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+H + GF N+ I +L+++Y+K +++++ VF + D + W++++AAY HG
Sbjct: 257 IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHY 454
G +A+K F M H + P+ VTF +L+ACSH+GLVEEG F+ M +Y++ P +HY
Sbjct: 317 GRDAIKHFELMV-HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 455 GIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDP 514
MVDLLGR G L A +I MPM+ VWGALLGAC ++ + ++G AA+ LF L+P
Sbjct: 376 SCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEP 435
Query: 515 NHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHD 574
Y +LSNIY W +A+++R+L+K+ L + G S +E N++H FV D H
Sbjct: 436 RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHP 495
Query: 575 ESDQIFEVLRKLDVKMREE 593
ES++I + L+++ KM+ E
Sbjct: 496 ESEKIQKKLKEIRKKMKSE 514
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 10/331 (3%)
Query: 15 ALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
A+KSCV +E+ R++H + K F+G L+ Y + G A ++F E P+ D
Sbjct: 40 AVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLE-EVSPDPVTLVSAASACAQLSDSKLGRSI 133
+V W S+++GY G SRM + E P+ VT +S SAC + GR I
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA 193
HG V + G+ + + N+ +N YGKTG + S+ LF ++ K+++SW++M+ + NG A
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 194 TNALDLFNEMIDKRI--EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
L FN + +R+ EP+ T ++ LR+C + + IH L + GF ++T
Sbjct: 217 EKGLAYFN--MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
AL+D+Y K E++ +F+ I D +AW + YA G +++ F M+ G+ P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKS 342
D V +L A S G++++ H F T S
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGK--HYFETMS 363
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 147/299 (49%), Gaps = 6/299 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+ T + +CV E GR IHG + K + ++ V +A I Y K G++ + +
Sbjct: 131 RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCK 190
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + ++V W +++ + ++G E LA+F+ M+ PD T ++ +C +
Sbjct: 191 LFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+L + IHG + G + + +LL+LY K G ++ + +F E+ D ++W++MLA
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ-LAVSYGFE 244
YA +G +A+ F M+ I P+ VT L AC+ + +EEG+ + ++ Y +
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA-WAVLFGG---YAETGMAHKSME 299
+ ++D+ + ++A + +P + W L G Y +T + K+ E
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE 428
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T L+SC + + + + IHG + G+ + +AL++LYSK G + D+ V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E PD + WT+++ Y G A+ F M V +SPD VT +AC+
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM-VHYGISPDHVTFTHLLNACSHSGL 351
Query: 127 SKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSML 184
+ G+ KR +D L + +++L G++G ++ A L +EMP + W ++L
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Query: 185 -AC--YADNGAATNALDLFNEMIDKRIEPNWVTLVS---------------------ALR 220
AC Y D T A + E+ + R N+V L + L
Sbjct: 412 GACRVYKDTQLGTKAAERLFEL-EPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
Query: 221 ACASASYLEEGRKIHQLAV 239
+ SY+E G KIH+ V
Sbjct: 471 RASGCSYIEHGNKIHKFVV 489
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 261/448 (58%)
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
+N L+N Y + G + +A +F EMPD+ + +W++M+A L LF EM
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
P+ TL S A + G++IH + YG EL+ V+++L MY++ ++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+ +P +++VAW L G A+ G + ++ M G RP+ + V +L++ S+L +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
Q +HA K G + + +SLI MY+KC + +A K F +D V+WSS+I+A
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
YGFHGQG+EA++LF MA ++++ N+V F+++L ACSH+GL ++G+ +FD+MV KY
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
P +HY +VDLLGR G LD+A II +MP++ +W LL AC+IH N +M + K
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
+ +DPN + Y LL+N++ K W + +++R +++ +KK G S E K EVH F
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447
Query: 569 SDRFHDESDQIFEVLRKLDVKMREECYE 596
DR +S +I+ L++L ++M+ + Y+
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYK 475
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 8/378 (2%)
Query: 31 IHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGT 90
++G ++K+N + LI Y + G++ +A +VF E P + W +++ G +
Sbjct: 16 VYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
E L+ F M L SPD TL S S A L +G+ IHG+ + GL+ L + +
Sbjct: 72 NEEGLSLFREMHGLG-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNS 130
Query: 151 SLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
SL ++Y + G ++ EI+ R MP +++++W++++ A NG L L+ M P
Sbjct: 131 SLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRP 190
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N +T V+ L +C+ + +G++IH A+ G V ++L+ MY KC +A F
Sbjct: 191 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVL 329
+ +D V W+ + Y G +++E+F M + + VA + +L A S G+
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 330 QQAVCL-HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIA 387
+ + L V K GF ++++ + +D A + R M K D+VIW ++++
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 388 AYGFHGQGEEALKLFYQM 405
A H E A ++F ++
Sbjct: 371 ACNIHKNAEMAQRVFKEI 388
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T+ GL+ + +G+ IHG+ K L+ D+ V S+L +Y + G++ D V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
P ++V W +++ G ++G PE L + +M + P+ +T V+ S+C+ L+
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G+ IH + G + +++ +SL+++Y K G + A F E D+D + WSSM++
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 187 YADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SYGFE 244
Y +G A++LFN M ++ +E N V ++ L AC+ + ++G ++ + V YGF+
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
T ++D+ + + A I +P K D+V W L A + VF
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 304 MLSDGVRPDAVALVKILTAI 323
+L + P+ A +L +
Sbjct: 388 ILQ--IDPNDSACYVLLANV 405
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 36/294 (12%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+ T L SC L G+ IH K + V S+LI +YSKCG + DA +
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ-- 123
F E D V+W+S+++ Y G + A+ F+ MA + + V ++ AC+
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 308
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSS 182
L D L V++ G L +++L G+ G + AE + R MP K D++ W +
Sbjct: 309 LKDKGL-ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPN----WVTL------------VSALRAC---- 222
+L+ + A A +F E++ +I+PN +V L VS +R
Sbjct: 368 LLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDK 425
Query: 223 -----ASASYLEEGRKIHQLAV-----SYGFELETTVSTALMDMYLKCSSPENA 266
A S+ E ++HQ + S E+ + + ++M LK P+ A
Sbjct: 426 NVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTA 479
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 294/559 (52%), Gaps = 10/559 (1%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
++F + +++ Y+K +++ A ++F E P+PD V + ++++GY + A+ F RM
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
L D TL +AC D L + +H F G D++ S+ N+ + Y K G +
Sbjct: 133 KLG-FEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 163 KSAEILFREMPD-KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
+ A +F M + +D +SW+SM+ Y + AL L+ EMI K + + TL S L A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD---IFNRIPKKDV 278
S +L GR+ H + GF + V + L+D Y KC + D +F I D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 279 VAWAVLFGGYA-ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
V W + GY+ ++ ++++ F M G RPD + V + +A S L Q +H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 338 FVTKSGFDNNEY-IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGE 396
KS +N + +LI +Y K ++ +A VF M + V ++ +I Y HG G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI 456
EAL L YQ S + PNK+TF+++LSAC+H G V+EG F+ M +++ P++EHY
Sbjct: 430 EAL-LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 457 MVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNH 516
M+DLLGR G+L+ A I+ MP + G W ALLGAC H N+ + E AA L + P
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 517 AGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDES 576
A Y +L+N+Y + W A +R ++ R++K G S +E+K + H FVA D H
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 577 DQIFEVLRKLDVKMREECY 595
++ E L ++ KM++ Y
Sbjct: 609 REVNEYLEEMMKKMKKVGY 627
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 12/298 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG---EMNDAV 64
D T++ L + L L GR HG L K + VGS LI+ YSKCG M D+
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGT-PELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+VF E PD+V+W ++++GY + E A+ F +M + PD + V SAC+
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSN 357
Query: 124 LSDSKLGRSIHGFVKRCGLDTH-LSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
LS + IHG + + ++ +S+ N+L++LY K+G+++ A +F MP+ + +S++
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSY 241
M+ YA +G T AL L+ M+D I PN +T V+ L ACA ++EG++ + + ++
Sbjct: 418 MIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETF 477
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSM 298
E E + ++D+ + E A + +P K VAWA L G + HK+M
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK----HKNM 531
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 175/385 (45%), Gaps = 39/385 (10%)
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTG----------------------------- 160
G+S+H + + + L+N +NLY K G
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 161 --SIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
I A LF E+P D +S++++++ YAD A+ LF M E + TL
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK-KD 277
+ AC ++ +++H +VS GF+ ++V+ A + Y K AV +F + + +D
Sbjct: 147 IAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
V+W + Y + K++ ++ M+ G + D L +L A++ L L H
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 338 FVTKSGFDNNEYIGASLIEMYAKCSSID---NANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+ K+GF N ++G+ LI+ Y+KC D ++ KVF+ + D+V+W+++I+ Y + +
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE 324
Query: 395 -GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
EEA+K F QM +P+ +F+ + SACS+ + I + + +
Sbjct: 325 LSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 454 YGIMVDLLGRMGELDRALDIINNMP 478
++ L + G L A + + MP
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMP 408
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 191/393 (48%), Gaps = 19/393 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D T+S + +C ++++ + +H F D V +A + YSK G + +AV VF
Sbjct: 139 DGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 68 MEYPK-PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
+ D V W S++ Y + ALA + M + + D TL S +A L
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNALTSLDH 255
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG---SIKSAEILFREMPDKDVISWSSM 183
GR HG + + G + + + L++ Y K G + +E +F+E+ D++ W++M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 184 LACYADNGA-ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SY 241
++ Y+ N + A+ F +M P+ + V AC++ S + ++IH LA+ S+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
+V+ AL+ +Y K + ++A +F+R+P+ + V++ + GYA+ G +++ ++
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT-KSGF----DNNEYIGASLIE 356
ML G+ P+ + V +L+A + G + + F T K F + Y + +I+
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEG--QEYFNTMKETFKIEPEAEHY--SCMID 491
Query: 357 MYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAA 388
+ + ++ A + M YK V W++++ A
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 265/483 (54%), Gaps = 10/483 (2%)
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
+ +H + G SL L+ L +I +LF +P D ++S++ +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
+ + + M+ + P+ T S +++CA S L G+ +H AV GF L+T V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
AL+ Y KC E A +F+R+P+K +VAW L G+ + G+A ++++VF M G
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
PD+ V +L+A ++ G + +H ++ G D N +G +LI +Y++C + A +V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 371 FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
F M +V W+++I+AYG HG G++A++LF +M + PN VTF+++LSAC+HAGL
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA---GPHVWG 487
VEEG +++ M Y+L+P EH+ MVD+LGR G LD A I+ + P +W
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWT 385
Query: 488 ALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENR 547
A+LGAC +H N +G AK L L+P++ G++ +LSNIY + + +R + N
Sbjct: 386 AMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 548 LKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE-------HQLK 600
L+K +G S++E++N+ + F D H E+ +I+ L L + +E Y HQ++
Sbjct: 446 LRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVE 505
Query: 601 IEE 603
EE
Sbjct: 506 EEE 508
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 19/339 (5%)
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F+ P PD L+ S++ + P +A++ RM + VSP T S +CA LS
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM-LSSNVSPSNYTFTSVIKSCADLS 121
Query: 126 DSKLGRSIH--GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
++G+ +H V GLDT++ A L+ Y K G ++ A +F MP+K +++W+S+
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAA--LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ + NG A A+ +F +M + EP+ T VS L ACA + G +HQ +S G
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+L + TAL+++Y +C A ++F+++ + +V AW + Y G +++E+F
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 304 MLSD-GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS-----GFDNNEYIGASLIEM 357
M D G P+ V V +L+A + G++++ ++ +TKS G +++ +++M
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH----VCMVDM 355
Query: 358 YAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFH 392
+ +D A K + +W++++ A H
Sbjct: 356 LGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P ++T + +KSC L L +G+ +H D +V +AL+ YSKCG+M A +V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P+ +V W S+V+G+E++G + A+ F +M PD T VS SACAQ
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE-SGFEPDSATFVSLLSACAQTGA 223
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG +H ++ GLD ++ L +L+NLY + G + A +F +M + +V +W++M++
Sbjct: 224 VSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISA 283
Query: 187 YADNGAATNALDLFNEMIDKRIE-PNWVTLVSALRACASASYLEEGRKIHQ 236
Y +G A++LFN+M D PN VT V+ L ACA A +EEGR +++
Sbjct: 284 YGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 295/606 (48%), Gaps = 71/606 (11%)
Query: 55 SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+K G + A +VF P+ D V W +++T Y R G + A+A F+++ + PD +
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR-FSDAKPDDYSF 73
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFR---- 170
+ S CA L + K GR I V R G L + NSL+++YGK SA +FR
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 171 -----------------------------EMPDKDVISWSSMLACYADNGAATNALDLFN 201
EMP + +W+ M++ +A G + L LF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 202 EMIDKRIEPNWVTLVSALRAC-ASASYLEEGRKIHQLAVSYGF----------------- 243
EM++ +P+ T S + AC A +S + GR +H + + G+
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 244 --------ELE-----TTVS-TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
ELE T VS +++D +K E A+++F+ P+K++V W + GY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
G +++ F M+ GV D A +L A S L +L +H + GF Y
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
+G +L+ +YAKC I A++ F +A KD+V W++++ A+G HG ++ALKL+ M S
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA-S 432
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
+KP+ VTFI +L+ CSH+GLVEEG IF+ MV Y++ + +H M+D+ GR G L
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 470 ALDIINN----MPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSN 525
A D+ + + W LLGAC H + ++G +K L +P+ + LLSN
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSN 552
Query: 526 IYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRK 585
+YC W +R + E +KK G S +E+ N+V +FV D H +++ E L
Sbjct: 553 LYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNC 612
Query: 586 LDVKMR 591
L +MR
Sbjct: 613 LQHEMR 618
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 66/393 (16%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE----- 59
A+PD ++ + L +C L ++ GR I + + + V ++LI++Y KC +
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 60 -----------------------MND-----AVEVFMEYPKPDVVLWTSIVTGYERSGTP 91
MN A++VF+E PK W +++G+ G
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 92 ELALAFFSRMAVLEEVSPDPVTLVSAASAC-AQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
E L+ F M + E PD T S +AC A S+ GR +H + + G + + N
Sbjct: 186 ESCLSLFKEM-LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 151 SLLNLYGKTGS-------IKSAEIL------------------------FREMPDKDVIS 179
S+L+ Y K GS ++S E+L F P+K++++
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W++M+ Y NG AL F EM+ ++ + + L AC+ + L G+ IH +
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
GF+ V AL+++Y KC + A F I KD+V+W + + G+A ++++
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
++ NM++ G++PD V + +LT S G++++
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 34/285 (11%)
Query: 6 RPDSHTVSIALKSCVG-LQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA- 63
+PD +T S + +C + GRM+H + K + ++++ Y+K G +DA
Sbjct: 201 KPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM 260
Query: 64 ------------------------------VEVFMEYPKPDVVLWTSIVTGYERSGTPEL 93
+EVF P+ ++V WT+++TGY R+G E
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 94 ALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
AL FF M + V D + AC+ L+ G+ IHG + CG + + N+L+
Sbjct: 321 ALRFFVEM-MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALV 379
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
NLY K G IK A+ F ++ +KD++SW++ML + +G A AL L++ MI I+P+ V
Sbjct: 380 NLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNV 439
Query: 214 TLVSALRACASASYLEEGRKIHQLAVS-YGFELETTVSTALMDMY 257
T + L C+ + +EEG I + V Y LE T ++DM+
Sbjct: 440 TFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + D L +C GL L G+MIHG L G +VG+AL+ LY+KCG++
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDI 388
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+A F + D+V W +++ + G + AL + M + + PD VT + +
Sbjct: 389 KEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM-IASGIKPDNVTFIGLLTT 447
Query: 121 CAQLSDSKLGRSI-HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
C+ + G I VK + + +++++G+ G + A+ L +
Sbjct: 448 CSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL--------ATT 499
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
+SS++ ++N + W TL L AC++ + E GR++ ++
Sbjct: 500 YSSLVTDSSNNSS-------------------WETL---LGACSTHWHTELGREVSKV 535
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDL 411
S I AK I +A +VF GM D V W++++ +Y G +EA+ LF Q+ SD
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSDA 66
Query: 412 KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
KP+ +F +ILS C+ G V+ G I +++ + ++D+ G+ + A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVI-RSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 472 DIINNMPMQAGPHV-WGALLGA 492
+ +M + V W +LL A
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFA 147
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 298/561 (53%), Gaps = 34/561 (6%)
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
G ++ A ++F++ P+PDVV+W +++ G+ + + + M + E V+PD T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFL 140
Query: 118 ASACAQLSDS-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD 176
+ + + G+ +H V + GL ++L + N+L+ +Y G + A +F +D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
V SW+ M++ Y +++L EM + P VTL+ L AC+ + +++H+
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIF-------------------------- 270
E + AL++ Y C + AV IF
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 271 -----NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISE 325
+++P +D ++W ++ GY G ++S+E+F M S G+ PD +V +LTA +
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 326 LGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSI 385
LG L+ + ++ K+ N+ +G +LI+MY KC + A KVF M +D W+++
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 386 IAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKY 445
+ +GQG+EA+K+F+QM + S ++P+ +T++ +LSAC+H+G+V++ F M + +
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMS-IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 446 QLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVA 505
++ P HYG MVD+LGR G + A +I+ MPM VWGALLGA +H++ M E+A
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELA 559
Query: 506 AKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHS 565
AK + L+P++ Y LL NIY K W + ++R I + +KK G S++E+ H
Sbjct: 560 AKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHE 619
Query: 566 FVASDRFHDESDQIFEVLRKL 586
FVA D+ H +S++I+ L +L
Sbjct: 620 FVAGDKSHLQSEEIYMKLEEL 640
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 197/428 (46%), Gaps = 51/428 (11%)
Query: 7 PDSHTVSIALKSCVGLQK----LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
PDSHT L GL++ L G+ +H + K L +++V +AL+++YS CG M+
Sbjct: 132 PDSHTFPFLLN---GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM 188
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A VF K DV W +++GY R E ++ M VSP VTL+ SAC+
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACS 247
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
++ D L + +H +V C + L L N+L+N Y G + A +FR M +DVISW+S
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 183 MLACYADN-------------------------------GAATNALDLFNEMIDKRIEPN 211
++ Y + G +L++F EM + P+
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 212 WVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFN 271
T+VS L ACA LE G I + + V AL+DMY KC E A +F+
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 272 RIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQ 331
+ ++D W + G A G ++++VF M ++PD + + +L+A + G++ Q
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 332 AVCLHAFVTKSGFDNNEYIGASL------IEMYAKCSSIDNANKVFRGMAYK-DVVIWSS 384
A F K D+ I SL ++M + + A ++ R M + ++W +
Sbjct: 488 A---RKFFAKMRSDHR--IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGA 542
Query: 385 IIAAYGFH 392
++ A H
Sbjct: 543 LLGASRLH 550
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/503 (32%), Positives = 277/503 (55%), Gaps = 9/503 (1%)
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
+E SP T C S +H + G D LA L+ +Y GS+
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
A +F + + + W+++ G L L+ +M +E + T L+AC +
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 225 A----SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
+ ++L +G++IH G+ + T L+DMY + + A +F +P ++VV+
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDG--VRPDAVALVKILTAISELGVLQQAVCLHAF 338
W+ + YA+ G A +++ F M+ + P++V +V +L A + L L+Q +H +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEA 398
+ + G D+ + ++L+ MY +C ++ +VF M +DVV W+S+I++YG HG G++A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 399 LKLFYQM-ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
+++F +M AN + P VTF+S+L ACSH GLVEEG +F+ M + + P EHY M
Sbjct: 371 IQIFEEMLANGAS--PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 458 VDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHA 517
VDLLGR LD A ++ +M + GP VWG+LLG+C IH N+++ E A++ LF L+P +A
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488
Query: 518 GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESD 577
G Y LL++IY + W +++ L++ L+K+ G+ +E++ +++SFV+ D F+ +
Sbjct: 489 GNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLME 548
Query: 578 QIFEVLRKLDVKMREECYEHQLK 600
QI L KL M+E+ Y Q K
Sbjct: 549 QIHAFLVKLAEDMKEKGYIPQTK 571
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 200/400 (50%), Gaps = 9/400 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P T + + C L +H + D D F+ + LI +YS G ++ A +V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC--AQL 124
F + K + +W ++ +G E L + +M + V D T AC ++
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASEC 193
Query: 125 SDSKL--GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
+ + L G+ IH + R G +H+ + +L+++Y + G + A +F MP ++V+SWS+
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 183 MLACYADNGAATNALDLFNEMI--DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
M+ACYA NG A AL F EM+ K PN VT+VS L+ACAS + LE+G+ IH +
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
G + V +AL+ MY +C E +F+R+ +DVV+W L Y G K++++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYA 359
F ML++G P V V +L A S G++++ L + + G A ++++
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 360 KCSSIDNANKVFRGMAYKD-VVIWSSIIAAYGFHGQGEEA 398
+ + +D A K+ + M + +W S++ + HG E A
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Query: 202 EMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS 261
++ + P+ T + C S L + ++H+ + G + + ++T L+ MY
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 262 SPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
S + A +F++ K+ + W LF G + + ++ M GV D +L
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 322 AI--SELGV--LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
A SE V L + +HA +T+ G+ ++ YI +L++MYA+ +D A+ VF GM +
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHS-DLKPNKVTFISILSACSHAGLVEEGIT 436
+VV WS++IA Y +G+ EAL+ F +M + D PN VT +S+L AC+ +E+G
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 437 IFDIMVNKY--QLMPDSEHYGIMVDLLGRMGELD---RALDIINNMPMQAGPHVWGALLG 491
I ++ + ++P +V + GR G+L+ R D +++ + + W +L+
Sbjct: 307 IHGYILRRGLDSILPV---ISALVTMYGRCGKLEVGQRVFDRMHDRDVVS----WNSLIS 359
Query: 492 ACHIH 496
+ +H
Sbjct: 360 SYGVH 364
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/638 (28%), Positives = 303/638 (47%), Gaps = 72/638 (11%)
Query: 32 HGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTP 91
H + K D ++ + LI YS NDA V P P + ++S++ ++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 92 ELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANS 151
++ FSRM + PD L + CA+LS K+G+ IH GLD + S
Sbjct: 98 TQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 152 LLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE-- 209
+ ++Y + G + A +F M DKDV++ S++L YA G + + +EM IE
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 210 ---------------------------------PNWVTLVSALRACASASYLEEGRKIHQ 236
P+ VT+ S L + + L GR IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP---------------------- 274
+ G + V +A++DMY K + +FN+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 275 -------------KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
+ +VV+W + G A+ G +++E+F M GV+P+ V + +L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVI 381
A + L H F + +N ++G++LI+MYAKC I+ + VF M K++V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 382 WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
W+S++ + HG+ +E + +F + + LKP+ ++F S+LSAC GL +EG F +M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLM-RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 442 VNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKM 501
+Y + P EHY MV+LLGR G+L A D+I MP + VWGALL +C + +N+ +
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 502 GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKN 561
E+AA+ LF L+P + G Y LLSNIY W +R+ ++ LKK G S +++KN
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 562 EVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQL 599
V++ +A D+ H + DQI E + ++ +MR+ + L
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNL 673
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A +P+ T+ L +C + L GR HGF + +L ++ VGSALI++Y+KCG +N
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+ VF P ++V W S++ G+ G + ++ F + + + PD ++ S SAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACG 500
Query: 123 QLSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
Q+ + G + + G+ L + ++NL G+ G ++ A L +EMP + D W
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVW 560
Query: 181 SSML-ACYADN 190
++L +C N
Sbjct: 561 GALLNSCRLQN 571
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 264/472 (55%), Gaps = 36/472 (7%)
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
Y G I+ + LF + D D+ +++ + + NG A L+ +++ I PN T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 216 VSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK 275
S L++C++ S G+ IH + +G ++ V+T L+D+Y K +A +F+R+P+
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 276 K-------------------------------DVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+ D+V+W V+ GYA+ G + ++ +F +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 305 LSDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
L++G +PD + +V L+A S++G L+ +H FV S N + LI+MY+KC S
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
++ A VF KD+V W+++IA Y HG ++AL+LF +M + L+P +TFI L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
AC+HAGLV EGI IF+ M +Y + P EHYG +V LLGR G+L RA + I NM M A
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+W ++LG+C +H + +G+ A+ L L+ ++G Y LLSNIY ++ AK+R+L+
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
KE + K G S +E++N+VH F A DR H +S +I+ +LRK+ +++ Y
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 180/376 (47%), Gaps = 42/376 (11%)
Query: 54 YSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVT 113
Y+ G++ ++ +F + PD+ L+T+ + +G + A + ++ + E++P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL-LSSEINPNEFT 132
Query: 114 LVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
S +C+ +K G+ IH V + GL +A L+++Y K G + SA+ +F MP
Sbjct: 133 FSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDKRI------------------------- 208
++ ++S ++M+ CYA G A LF+ M ++ I
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 209 -------EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS 261
+P+ +T+V+AL AC+ LE GR IH S L V T L+DMY KC
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 262 SPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKIL 320
S E AV +FN P+KD+VAW + GYA G + ++ +F M G++P + + L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 321 TAISELGVLQQAV-CLHAFVTKSGFDNN-EYIGASLIEMYAKCSSIDNANKVFRGMAYK- 377
A + G++ + + + + G E+ G L+ + + + A + + M
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC-LVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 378 DVVIWSSIIAAYGFHG 393
D V+WSS++ + HG
Sbjct: 428 DSVLWSSVLGSCKLHG 443
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 38/314 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T S LKSC + G++IH + K L D +V + L+++Y+K G++ A +V
Sbjct: 128 PNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKV 183
Query: 67 FMEYPKP-------------------------------DVVLWTSIVTGYERSGTPELAL 95
F P+ D+V W ++ GY + G P AL
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDAL 243
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL 155
F ++ + PD +T+V+A SAC+Q+ + GR IH FVK + ++ + L+++
Sbjct: 244 MLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDM 303
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMID-KRIEPNWVT 214
Y K GS++ A ++F + P KD+++W++M+A YA +G + +AL LFNEM ++P +T
Sbjct: 304 YSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDIT 363
Query: 215 LVSALRACASASYLEEGRKIHQ-LAVSYGFELETTVSTALMDMYLKCSSPENAVD-IFNR 272
+ L+ACA A + EG +I + + YG + + L+ + + + A + I N
Sbjct: 364 FIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM 423
Query: 273 IPKKDVVAWAVLFG 286
D V W+ + G
Sbjct: 424 NMDADSVLWSSVLG 437
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD TV AL +C + LE GR IH F+K + ++ V + LI++YSKCG + +AV
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + P+ D+V W +++ GY G + AL F+ M + + P +T + ACA
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 126 DSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
G R + G+ + L++L G+ G +K A + M D D + WSS+
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSV 435
Query: 184 LA 185
L
Sbjct: 436 LG 437
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 275/519 (52%), Gaps = 33/519 (6%)
Query: 109 PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEIL 168
P T + C+Q + G+ +H ++ G + + N LL +Y K GS+ A +
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 169 FREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK---------------------- 206
F EMP++D+ SW+ M+ YA+ G A LF+EM +K
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 207 -------RI---EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
R+ PN T+ A+ A A+ + G++IH V G + + + ++LMDM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 257 YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL 316
Y KC + A +IF++I +KDVV+W + Y ++ + +F ++ RP+
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY 376
+L A ++L + +H ++T+ GFD + +SL++MY KC +I++A V G
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 377 KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGIT 436
D+V W+S+I +GQ +EALK ++ + S KP+ VTF+++LSAC+HAGLVE+G+
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALK-YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 437 IFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH 496
F + K++L S+HY +VDLL R G ++ +I+ MPM+ +W ++LG C +
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 497 HNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSM 556
NI + E AA+ LF ++P + Y ++NIY W K+R ++E + K G S
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 557 VELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
E+K + H F+A+D H +QI E LR+L KM+EE Y
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 224/464 (48%), Gaps = 41/464 (8%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P + T ++ C + LE G+ +H ++ + + + L+ +Y+KCG + DA +
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 66 VFMEYPKPDVVLW-------------------------------TSIVTGYERSGTPELA 94
VF E P D+ W T++VTGY + PE A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 95 LAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLN 154
L +S M + P+ T+ A +A A + + G+ IHG + R GLD+ L +SL++
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
+YGK G I A +F ++ +KDV+SW+SM+ Y + LF+E++ PN T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
L ACA + E G+++H GF+ + S++L+DMY KC + E+A + + P
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV- 333
K D+V+W L GG A+ G ++++ F +L G +PD V V +L+A + G++++ +
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
++ K + L+++ A+ + V M K +W+S++ +
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 393 GQ---GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
G EEA + +++ N VT++++ + + AG EE
Sbjct: 502 GNIDLAEEAAQELFKIEPE-----NPVTYVTMANIYAAAGKWEE 540
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 156/290 (53%), Gaps = 3/290 (1%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+RP+ TVSIA+ + ++ + G+ IHG + + LD D + S+L+++Y KCG +++A
Sbjct: 214 SRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 273
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F + + DVV WTS++ Y +S + FS + E P+ T +ACA L
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADL 332
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
+ +LG+ +HG++ R G D + ++SL+++Y K G+I+SA+ + P D++SW+S++
Sbjct: 333 TTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI 392
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGF 243
A NG AL F+ ++ +P+ VT V+ L AC A +E+G + + + +
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETG 292
+ T L+D+ + E + + +P K WA + GG + G
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 39/326 (11%)
Query: 202 EMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS 261
+++ + +P T + ++ C+ LEEG+K+H+ + GF + L+ MY KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 262 SPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-------------- 307
S +A +F+ +P +D+ +W V+ GYAE G+ ++ ++F M
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 308 ------------------GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
RP+ + + A + + +++ +H + ++G D++E
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
+ +SL++MY KC ID A +F + KDVV W+S+I Y + E LF ++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
+ +PN+ TF +L+AC+ E G + M + P S +VD+ + G ++
Sbjct: 315 E-RPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 470 ALDIINNMPMQAGPHV--WGALLGAC 493
A +++ P P + W +L+G C
Sbjct: 373 AKHVVDGCPK---PDLVSWTSLIGGC 395
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+ +T + L +C L E+G+ +HG++ + D F S+L+++Y+KCG + A
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
V PKPD+V WTS++ G ++G P+ AL +F + + PD VT V+ SAC
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD-LLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 126 DSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSM 183
+ G + ++ L L++L ++G + + + EMP K W+S+
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 184 LACYADNGAATNALDLFNEMIDKRIEP-NWVTLVSALRACASASYLEEGRKIHQ 236
L + G A + E+ +IEP N VT V+ A+A EE K+ +
Sbjct: 495 LGGCSTYGNIDLAEEAAQELF--KIEPENPVTYVTMANIYAAAGKWEEEGKMRK 546
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
FG + K + +L +P A ++ S+ L++ +H + SGF
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
I L+ MYAKC S+ +A KVF M +D+ W+ ++ Y G EEA KLF +
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
M + + ++ ++++ EE + ++ +M Q +P+S
Sbjct: 177 MT-----EKDSYSWTAMVTGYVKKDQPEEALVLYSLM----QRVPNS 214
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 267/475 (56%), Gaps = 6/475 (1%)
Query: 131 RSIHGFVKRCGL---DTHLS--LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
R IH F R G+ D L L L++L + ++ + +V W++++
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 186 CYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
YA+ G + +A L+ EM + +EP+ T ++A + + + G IH + + GF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
V +L+ +Y C +A +F+++P+KD+VAW + G+AE G +++ ++ M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
S G++PD +V +L+A +++G L +H ++ K G N + L+++YA+C +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ A +F M K+ V W+S+I +G G+EA++LF M + L P ++TF+ IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
CSH G+V+EG F M +Y++ P EH+G MVDLL R G++ +A + I +MPMQ
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+W LLGAC +H + + E A + L+PNH+G Y LLSN+Y ++ W + K+R +
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQL 599
+ +KKV G S+VE+ N VH F+ D+ H +SD I+ L+++ ++R E Y Q+
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 201/421 (47%), Gaps = 38/421 (9%)
Query: 14 IALKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELY----SKCGEMNDAVEVFM 68
I L G+ + R IH F + + D +G LI Y M+ A +VF
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFS 77
Query: 69 EYPKP-DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ KP +V +W +++ GY G A + + M V V PD T A ++D
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+LG +IH V R G + + + NSLL+LY G + SA +F +MP+KD+++W+S++ +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A+NG AL L+ EM K I+P+ T+VS L ACA L G+++H + G
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS- 306
S L+D+Y +C E A +F+ + K+ V+W L G A G +++E+F M S
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD-------------NNEYIGAS 353
+G+ P + V IL A C H + K GF+ E+ G
Sbjct: 318 EGLLPCEITFVGILYA-----------CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC- 365
Query: 354 LIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEA----LKLFYQMANH 408
++++ A+ + A + + M + +VVIW +++ A HG + A +++ NH
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNH 425
Query: 409 S 409
S
Sbjct: 426 S 426
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 152/284 (53%), Gaps = 4/284 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+HT +K+ + + +G IH + + ++V ++L+ LY+ CG++ A +V
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + P+ D+V W S++ G+ +G PE ALA ++ M + + PD T+VS SACA++
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGA 237
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG+ +H ++ + GL +L +N LL+LY + G ++ A+ LF EM DK+ +SW+S++
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 187 YADNGAATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEG-RKIHQLAVSYGFE 244
A NG A++LF M + P +T V L AC+ ++EG ++ Y E
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE 357
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
++D+ + + A + +P + +VV W L G
Sbjct: 358 PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T+ L +C + L +G+ +H ++ K L ++ + L++LY++CG + +A
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 278
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F E + V WTS++ G +G + A+ F M E + P +T V AC+
Sbjct: 279 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338
Query: 126 DSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
K G + ++ + +++L + G +K A + MP +V+ W ++
Sbjct: 339 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPN 211
L +G + L F + ++EPN
Sbjct: 399 LGACTVHGDSD--LAEFARIQILQLEPN 424
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 295/555 (53%), Gaps = 44/555 (7%)
Query: 37 KENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALA 96
K +L+ D + + I + ++ AV + +P+V ++ ++ G+ P +L
Sbjct: 798 KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 857
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
+ RM + + VSP T S A + S+ G S+ + + G H+ + +L++ Y
Sbjct: 858 LYVRM-LRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFY 914
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
TG I+ A +F EMP++D I+W++M++ Y +A L N+M +K
Sbjct: 915 SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN--------- 965
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
S L++ Y+ + E A +FN++P K
Sbjct: 966 ------------------------------EATSNCLINGYMGLGNLEQAESLFNQMPVK 995
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
D+++W + GY++ +++ VF M+ +G+ PD V + +++A + LGVL+ +H
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGE 396
+ ++GF + YIG++L++MY+KC S++ A VF + K++ W+SII HG +
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI 456
EALK+F +M S +KPN VTF+S+ +AC+HAGLV+EG I+ M++ Y ++ + EHYG
Sbjct: 1116 EALKMFAKMEMES-VKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 1174
Query: 457 MVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNH 516
MV L + G + AL++I NM + +WGALL C IH N+ + E+A L L+P +
Sbjct: 1175 MVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMN 1234
Query: 517 AGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL-GQSMVELKNEVHSFVASDRFHDE 575
+GYY LL ++Y W + A++R ++E ++K+ G S + + H F A+D+ H
Sbjct: 1235 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 1294
Query: 576 SDQIFEVLRKLDVKM 590
SD++ +L ++ +M
Sbjct: 1295 SDEVCLLLDEIYDQM 1309
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T+S + +C L LE+G+ +H + + D+++GSAL+++YSKCG + A+ V
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F PK ++ W SI+ G G + AL F++M +E V P+ VT VS +AC
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME-MESVKPNAVTFVSVFTACTHAGL 1148
Query: 127 SKLGRSIHGFVKRCGLDTHLSLAN-----SLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
GR I+ R +D + ++N +++L+ K G I A L M + + + W
Sbjct: 1149 VDEGRRIY----RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIW 1204
Query: 181 SSML 184
++L
Sbjct: 1205 GALL 1208
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 289/553 (52%), Gaps = 5/553 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ T+ ++C L L+ GR +HGF K L FV S++ YSK G ++A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
F E D+ WTSI+ RSG E + F M + + PD V + + ++
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN-KGMHPDGVVISCLINELGKMM 345
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF-REMPDKDVISWSSML 184
G++ HGFV R ++ NSLL++Y K + AE LF R + + +W++ML
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
Y ++LF ++ + IE + + S + +C+ + G+ +H V +
Sbjct: 406 KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
L +V +L+D+Y K A +F +V+ W + Y + K++ +F M
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+S+ +P ++ LV +L A G L++ +H ++T++ + N + A+LI+MYAKC +
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHL 584
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ + ++F KD V W+ +I+ YG HG E A+ LF QM SD+KP TF+++LSA
Sbjct: 585 EKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKPTGPTFLALLSA 643
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
C+HAGLVE+G +F + +++Y + P+ +HY +VDLL R G L+ A + +MP
Sbjct: 644 CTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGV 702
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
+WG LL +C H +MG A+ DP + GYY +L+N+Y W A + R +++
Sbjct: 703 IWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMR 762
Query: 545 ENRLKKVLGQSMV 557
E+ + K G S+V
Sbjct: 763 ESGVGKRAGHSVV 775
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 263/504 (52%), Gaps = 20/504 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
PD T + + +C L VG +HG LK D + VG++ + YSKCG + DA
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL 182
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM--AVLEEVSPDPVTLVSAASACAQ 123
VF E P DVV WT+I++G+ ++G E L + +M A + P+P TL AC+
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
L K GR +HGF + GL + + +S+ + Y K+G+ A + FRE+ D+D+ SW+S+
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+A A +G + D+F EM +K + P+ V + + + +G+ H + + F
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKK-DVVAWAVLFGGYAETGMAHKSMEVFC 302
L++TV +L+ MY K A +F RI ++ + AW + GY + K +E+F
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
+ + G+ D+ + ++++ S +G + LH +V K+ D + SLI++Y K
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMG 482
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+ A ++F A +V+ W+++IA+Y Q E+A+ LF +M + + KP+ +T +++L
Sbjct: 483 DLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLL 540
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEH------YGIMVDLLGRMGELDRALDIINN 476
AC + G +E G M+++Y + ++EH ++D+ + G L+++ ++ +
Sbjct: 541 MACVNTGSLERG-----QMIHRY--ITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-D 592
Query: 477 MPMQAGPHVWGALLGACHIHHNIK 500
Q W ++ +H +++
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVE 616
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 242/499 (48%), Gaps = 24/499 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D H I + L+ L R + + L ++FV S LI Y+ G+ N + VF
Sbjct: 26 DRHISVILCDQSLSLESL---RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVF 82
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ D+ LW SI+ + +G +L FF M +L SPD T SACA+L
Sbjct: 83 HLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM-LLSGQSPDHFTAPMVVSACAELLWF 141
Query: 128 KLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+G +HG V K G D + ++ S + Y K G ++ A ++F EMPD+DV++W+++++
Sbjct: 142 HVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISG 201
Query: 187 YADNGAATNALDLFNEM------IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+ NG + L +M +DK PN TL +AC++ L+EGR +H AV
Sbjct: 202 HVQNGESEGGLGYLCKMHSAGSDVDK---PNPRTLECGFQACSNLGALKEGRCLHGFAVK 258
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
G V +++ Y K +P A F + +D+ +W + A +G +S ++
Sbjct: 259 NGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDM 318
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
F M + G+ PD V + ++ + ++ ++ Q H FV + F + + SL+ MY K
Sbjct: 319 FWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCK 378
Query: 361 CSSIDNANKVF-RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+ A K+F R + W++++ YG + ++LF ++ N ++ + +
Sbjct: 379 FELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG-IEIDSASAT 437
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
S++S+CSH G V G ++ +V K L ++DL G+MG+L A M
Sbjct: 438 SVISSCSHIGAVLLGKSLHCYVV-KTSLDLTISVVNSLIDLYGKMGDLTVAW----RMFC 492
Query: 480 QAGPHV--WGALLGACHIH 496
+A +V W A++ A ++H
Sbjct: 493 EADTNVITWNAMI-ASYVH 510
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 19/250 (7%)
Query: 203 MIDKRIEPNWVTLVSALRACASASY---------------LEEGRKIHQLAVSYGFELET 247
M+ + ++PN V + L + +SASY LE RK + L ++ G
Sbjct: 1 MLRRLLKPNLVVTLRKLSS-SSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENI 59
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
V++ L+ Y P + +F+ + ++D+ W + + G +S+ F +ML
Sbjct: 60 FVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLS 119
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTK-SGFDNNEYIGASLIEMYAKCSSIDN 366
G PD +++A +EL +H V K GFD N +GAS + Y+KC + +
Sbjct: 120 GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM-ANHSDL-KPNKVTFISILSA 424
A VF M +DVV W++II+ + +G+ E L +M + SD+ KPN T A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 425 CSHAGLVEEG 434
CS+ G ++EG
Sbjct: 240 CSNLGALKEG 249
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 253/440 (57%), Gaps = 9/440 (2%)
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
L N L+N+Y K + A LF +MP ++VISW++M++ Y+ AL+L M+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+ PN T S LR+C S + R +H + G E + V +AL+D++ K PE+A+
Sbjct: 158 VRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+F+ + D + W + GG+A+ + ++E+F M G + L +L A + L
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
+L+ + H + K +D + + +L++MY KC S+++A +VF M +DV+ WS++I+
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
+G +EALKLF +M + S KPN +T + +L ACSHAGL+E+G F M Y +
Sbjct: 333 GLAQNGYSQEALKLFERMKS-SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P EHYG M+DLLG+ G+LD A+ ++N M + W LLGAC + N+ + E AAK
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFV 567
+ LDP AG YTLLSNIY + W + ++R+ +++ +KK G S +E+ ++H+F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 568 ASDRFHDESDQIFEVLRKLD 587
D H QI EV +KL+
Sbjct: 512 IGDNSH---PQIVEVSKKLN 528
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 201/383 (52%), Gaps = 8/383 (2%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
DS T S +K C+ + + G +I L MF+ + LI +Y K +NDA ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
+ P+ +V+ WT++++ Y + + AL M + + V P+ T S +C +SD
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
++ +H + + GL++ + + ++L++++ K G + A +F EM D I W+S++ +
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A N + AL+LF M TL S LRAC + LE G + H V Y +L
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL-- 293
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
++ AL+DMY KC S E+A+ +FN++ ++DV+ W+ + G A+ G + +++++F M S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTK-SGFDNNEYIGASLIEMYAKCSSIDN 366
G +P+ + +V +L A S G+L+ + K G D +I++ K +D+
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 367 ANKVFRGMAYK-DVVIWSSIIAA 388
A K+ M + D V W +++ A
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGA 436
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 14/292 (4%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ RP+ +T S L+SC G+ + RM+H + KE L+ D+FV SALI++++K GE
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
DA+ VF E D ++W SI+ G+ ++ ++AL F RM ++ + TL S A
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA-EQATLTSVLRA 269
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
C L+ +LG H + + D L L N+L+++Y K GS++ A +F +M ++DVI+W
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG----RKIHQ 236
S+M++ A NG + AL LF M +PN++T+V L AC+ A LE+G R + +
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
L YG + ++D+ K ++AV + N + + D V W L G
Sbjct: 388 L---YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 135/264 (51%), Gaps = 7/264 (2%)
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T ++ C S + EG I + G + L++MY+K + +A +F+++
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P+++V++W + Y++ + K++E+ ML D VRP+ +L + + + ++
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
LH + K G +++ ++ ++LI+++AK ++A VF M D ++W+SII + +
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
+ + AL+LF +M + + T S+L AC+ L+E G+ + + KY D
Sbjct: 240 RSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLALLELGMQAH-VHIVKYD--QDLIL 295
Query: 454 YGIMVDLLGRMGELDRALDIINNM 477
+VD+ + G L+ AL + N M
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQM 319
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 302/591 (51%), Gaps = 55/591 (9%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG-EMNDAV---- 64
H +S+ L SC L+ L IHG K +D D + LI C ++DA+
Sbjct: 7 HCLSL-LNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYAR 59
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+ + +P+PD ++ ++V GY S P ++A F M V PD + A
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
+ G +H + GL++HL + +L+ +YG G ++ A +F EM ++++W++++
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 185 -ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
AC+ N A A ++F++M+ R +W +++
Sbjct: 180 TACFRGNDVA-GAREIFDKML-VRNHTSWNVMLAG------------------------- 212
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
Y+K E+A IF+ +P +D V+W+ + G A G ++S F
Sbjct: 213 -------------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRE 259
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+ G+ P+ V+L +L+A S+ G + LH FV K+G+ + +LI+MY++C +
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 364 IDNANKVFRGMAYKDVVI-WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+ A VF GM K ++ W+S+IA HGQGEEA++LF +M + + P+ ++FIS+L
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG-VTPDGISFISLL 378
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
ACSHAGL+EEG F M Y + P+ EHYG MVDL GR G+L +A D I MP+
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPT 438
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
VW LLGAC H NI++ E + L LDPN++G LLSN Y W + A +R
Sbjct: 439 AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKS 498
Query: 543 IKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
+ R+KK S+VE+ ++ F A ++ + E L+++ +++++E
Sbjct: 499 MIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDE 549
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 64/350 (18%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS + + +K+ + L G +H K L+ +FVG+ LI +Y CG + A +V
Sbjct: 104 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKV 163
Query: 67 FMEYPKPDVVLWTSIVT-------------------------------GYERSGTPELAL 95
F E +P++V W +++T GY ++G E A
Sbjct: 164 FDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAK 223
Query: 96 AFFSRMAVLEEV------------------------------SPDPVTLVSAASACAQLS 125
FS M ++V SP+ V+L SAC+Q
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD-VISWSSML 184
+ G+ +HGFV++ G +S+ N+L+++Y + G++ A ++F M +K ++SW+SM+
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGF 243
A A +G A+ LFNEM + P+ ++ +S L AC+ A +EEG ++ Y
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETG 292
E E ++D+Y + + A D ++P + W L G + G
Sbjct: 404 EPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A P+ +++ L +C E G+++HGF++K + V +ALI++YS+CG +
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 63 AVEVF--MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A VF M+ K +V WTS++ G G E A+ F+ M V+PD ++ +S A
Sbjct: 323 ARLVFEGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY-GVTPDGISFISLLHA 380
Query: 121 CAQLSDSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVI 178
C+ + G +KR ++ + +++LYG++G ++ A +MP I
Sbjct: 381 CSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAI 440
Query: 179 SWSSMLACYADNG 191
W ++L + +G
Sbjct: 441 VWRTLLGACSSHG 453
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 306/561 (54%), Gaps = 30/561 (5%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+PD TV C L GR +HG+ ++ E + V +++I++Y KCG A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F D+V W S+++ + ++G A F + S ++ V A
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDS 509
Query: 125 SDSKL-GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD-KDVISWSS 182
SDS + G+S+H +++ K G + SA + M + +D+ SW+S
Sbjct: 510 SDSLIFGKSVHCWLQ-------------------KLGDLTSAFLRLETMSETRDLTSWNS 550
Query: 183 MLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
+++ A +G +L F M + +I + +TL+ + A + + +GR H LA+
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
EL+T + L+ MY +C E+AV +F I ++ +W + ++ + ++F
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
N+ + P+ + V +L+A ++LG + H + + GF N ++ A+L++MY+ C
Sbjct: 671 RNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
++ KVFR + W+S+I+A+GFHG GE+A++LF +++++S+++PNK +FIS+
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM--PM 479
LSACSH+G ++EG++ + M K+ + P +EH +VD+LGR G+L A + I + P
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 480 QAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
+AG VWGALL AC+ H + K+G+ A+ LF ++P++A YY L+N Y W A +L
Sbjct: 848 KAG--VWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRL 905
Query: 540 RSLIKENRLKKVLGQSMVELK 560
R ++++N LKK+ G S+++++
Sbjct: 906 RKMVEDNALKKLPGYSVIDVR 926
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 245/508 (48%), Gaps = 42/508 (8%)
Query: 30 MIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSG 89
M+H + L GD + +AL+ LY+K ++ A VF D+V W +I+T +G
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL--DTHLS 147
P +L +F M + D VT SAC+ + + LG S+HG V + G + H+S
Sbjct: 269 HPRKSLQYFKSMTGSGQ-EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVS 327
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM--ID 205
+ NS++++Y K G ++AE +F E+ +DVIS +++L +A NG A + N+M +D
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT---VSTALMDMYLKCSS 262
K I+P+ T+VS C S+ EGR +H V E+++ V +++DMY KC
Sbjct: 388 K-IQPDIATVVSITSICGDLSFSREGRAVHGYTVR--MEMQSRALEVINSVIDMYGKCGL 444
Query: 263 PENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD--GVRPDAVALVKIL 320
A +F +D+V+W + +++ G HK+ +F ++S+ + ++ IL
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 321 TAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV 380
T+ L +H ++ K G L + + ++ +D+
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLG---------DLTSAFLRLETMSET---------RDLT 546
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDI 440
W+S+I+ G E+L+ F M+ ++ + +T + +SA + GLV +G +
Sbjct: 547 SWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGL 606
Query: 441 MVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV--WGALLGACHIHHN 498
+ + + D++ ++ + GR +++ A+ + + + P++ W ++ A + N
Sbjct: 607 AIKSLREL-DTQLQNTLITMYGRCKDIESAVKVFG---LISDPNLCSWNCVISA--LSQN 660
Query: 499 IKMGEVAA--KNLFPLDPNHAGYYTLLS 524
EV +NL L+PN + LLS
Sbjct: 661 KAGREVFQLFRNL-KLEPNEITFVGLLS 687
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 208/415 (50%), Gaps = 6/415 (1%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L+S + + E R +H F K L D+ S L+ Y + GE+ + +F E + DV
Sbjct: 94 LRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDV 153
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
++W S++T ++G A+ F M + + D TL+ AASA + L S+ +H
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEM-IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
GL SL N+L+NLY K ++ SAE +F M +D++SW++++ NG
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF--ELETTVSTAL 253
+L F M E + VT + AC+S L G +H L + G+ E +V ++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPD 312
+ MY KC E A +F + +DV++ + G+A GM ++ + M S D ++PD
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY-IGASLIEMYAKCSSIDNANKVF 371
+V I + +L ++ +H + + + + S+I+MY KC A +F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ-MANHSDLKPNKVTFISILSAC 425
+ ++D+V W+S+I+A+ +G +A LF + ++ +S K + T ++IL++C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 2/348 (0%)
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
++++ RS+H F +CGL L+ ++ LL YG+TG + S+ LF E+ +KDVI W+SM+
Sbjct: 101 TETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMI 160
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
NG A+ LF EMI K E + TL+ A A +S + +H LA+ G
Sbjct: 161 TALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV 220
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
++++ ALM++Y K + +A +F + +D+V+W + G KS++ F +M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY--IGASLIEMYAKCS 362
G D V +++A S + L LH V KSG+ + +G S+I MY+KC
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+ A VF + +DV+ ++I+ + +G EEA + QM + ++P+ T +SI
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
S C EG + V E ++D+ G+ G +A
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM 254
N D E ++ +E +++ L LR+ + E R +H A+ G + S+ L+
Sbjct: 70 NLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLL 129
Query: 255 DMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAV 314
Y + ++ +F+ + +KDV+ W + + G ++ +F M+ G D+
Sbjct: 130 TFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDST 189
Query: 315 ALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM 374
L+ +A+S L + ++ LH ++G + + +L+ +YAK ++ +A VF M
Sbjct: 190 TLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHM 249
Query: 375 AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
++D+V W++I+ +G ++L+ F M S + + VTF ++SACS
Sbjct: 250 EHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG-SGQEADTVTFSCVISACS 300
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 285/522 (54%), Gaps = 14/522 (2%)
Query: 32 HGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGY-ERSG- 89
HGF+ K+ + +F+ + L++ Y+K E +DA ++F E P ++V W ++ G +R G
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 90 ---TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHL 146
L + SR+ + +VS D V+ + C ++ K G +H + + GL++
Sbjct: 119 TNHRAHLGFCYLSRI-LFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSC 177
Query: 147 SLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM-ID 205
+ SL++ YGK G I A +F + D+D++ W+++++ Y NG A L M D
Sbjct: 178 FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSD 237
Query: 206 K-RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
K R ++ T S L AC +E+G++IH + ++ + V+TAL++MY K +
Sbjct: 238 KNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLS 293
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
+A + F + ++VV+W + G+A+ G ++M +F ML + ++PD + +L++ +
Sbjct: 294 DARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSS 384
+ + + + A VTK G + + SLI Y++ ++ A F + D+V W+S
Sbjct: 354 KFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTS 413
Query: 385 IIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNK 444
+I A HG EE+L++F M L+P+K+TF+ +LSACSH GLV+EG+ F M
Sbjct: 414 VIGALASHGFAEESLQMFESMLQ--KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 445 YQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEV 504
Y++ + EHY ++DLLGR G +D A D++N+MP + H A G C+IH + +
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKW 531
Query: 505 AAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
AK L ++P Y++LSN Y + +W+ AA LR + N
Sbjct: 532 GAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRN 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T + L SC + + + + K+ + V ++LI YS+ G +++A+
Sbjct: 339 QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
F +PD+V WTS++ G E +L F M L+++ PD +T + SAC+
Sbjct: 399 CFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM--LQKLQPDKITFLEVLSACSHGG 456
Query: 126 DSKLG----RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
+ G + + F K D H + L++L G+ G I A + MP
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYT---CLIDLLGRAGFIDEASDVLNSMP 505
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 290/542 (53%), Gaps = 13/542 (2%)
Query: 23 QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYP--KPDVVLWTS 80
Q++ +IHGF + ++ +GS+L Y + ++ A F P K + W +
Sbjct: 24 QQVHAKVIIHGF------EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 81 IVTGYERSGTPELA--LAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVK 138
I++GY +S T + L ++RM + D LV A AC L + G IHG
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCD-GVDSFNLVFAIKACVGLGLLENGILIHGLAM 136
Query: 139 RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALD 198
+ GLD +A SL+ +Y + G+++SA+ +F E+P ++ + W ++ Y
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 199 LFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF-ELETTVSTALMDMY 257
LF M D + + +TL+ ++AC + + G+ +H +++ F + + +++DMY
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV 317
+KC +NA +F ++VV W L G+A+ A ++ ++F ML + + P+ L
Sbjct: 257 VKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
IL + S LG L+ +H ++ ++G + + S I+MYA+C +I A VF M +
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+V+ WSS+I A+G +G EEAL F++M + ++ PN VTF+S+LSACSH+G V+EG
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLSACSHSGNVKEGWKQ 435
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHH 497
F+ M Y ++P+ EHY MVDLLGR GE+ A I+NMP++ WGALL AC IH
Sbjct: 436 FESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHK 495
Query: 498 NIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
+ + A+ L ++P + Y LLSNIY W +R + +K +GQS
Sbjct: 496 EVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSAT 555
Query: 558 EL 559
E+
Sbjct: 556 EV 557
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 222/426 (52%), Gaps = 21/426 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
DS + A+K+CVGL LE G +IHG K LD D +V +L+E+Y++ G M A +VF
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 68 MEYPKPDVVLWTSIVTGYER-SGTPELALAFFSRMAVLEE--VSPDPVTLVSAASACAQL 124
E P + VLW ++ GY + S PE+ F ++ + ++ D +TL+ AC +
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEV----FRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 125 SDSKLGRSIHGF-VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
K+G+ +HG ++R +D L S++++Y K + +A LF D++V+ W+++
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ +A A A DLF +M+ + I PN TL + L +C+S L G+ +H + G
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
E++ T+ +DMY +C + + A +F+ +P+++V++W+ + + G+ ++++ F
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCS 362
M S V P++V V +L+A S G +++ +T+ G E A ++++ +
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG 463
Query: 363 SIDNANKVFRGMAYKDVV-IWSSIIAAYGFHGQ----GEEALKLFYQMANHSDLKPNKVT 417
I A M K + W ++++A H + GE A KL ++P K +
Sbjct: 464 EIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL-------SMEPEKSS 516
Query: 418 FISILS 423
+LS
Sbjct: 517 VYVLLS 522
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP--KKDVVA 280
+ A L +++H + +GFE E + ++L + Y++ + + A FNRIP K++ +
Sbjct: 15 SQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS 74
Query: 281 WAVLFGGYAETG--------MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
W + GY+++ + + M C DGV D+ LV + A LG+L+
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHC----DGV--DSFNLVFAIKACVGLGLLENG 128
Query: 333 VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+ +H K+G D ++Y+ SL+EMYA+ ++++A KVF + ++ V+W ++ Y +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
+ E +LF M + + L + +T I ++ AC +
Sbjct: 189 SKDPEVFRLFCLMRD-TGLALDALTLICLVKACGN 222
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T++ L SC L L G+ +HG++ + ++ D ++ I++Y++CG + A V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F P+ +V+ W+S++ + +G E AL F +M + V P+ VT VS SAC+ +
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS-QNVVPNSVTFVSLLSACSHSGN 428
Query: 127 SKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS-WSSML 184
K G + + G+ +++L G+ G I A+ MP K + S W ++L
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 185 A 185
+
Sbjct: 489 S 489
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
A AL+ IL+ L QQ +HA V GF++ +G+SL Y + + +D A F
Sbjct: 7 ARALLTILSQAKTLNHTQQ---VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFN 63
Query: 373 GMA--YKDVVIWSSIIAAYGFHGQG--EEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+ ++ W++I++ Y + L L+ +M H D + + + AC
Sbjct: 64 RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCD-GVDSFNLVFAIKACVGL 122
Query: 429 GLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGA 488
GL+E GI I + + K L D +V++ ++G ++ A + + +P++ +WG
Sbjct: 123 GLLENGILIHGLAM-KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGV 180
Query: 489 LL 490
L+
Sbjct: 181 LM 182
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/601 (28%), Positives = 304/601 (50%), Gaps = 41/601 (6%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFF---- 98
D F+ S LI Y++ A+ VF E + + +++ Y A + F
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 99 -SRMAVLEEVSPDPVTL---VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLN 154
S + PD +++ + A S C L R +HGFV R G D+ + + N ++
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMID-KRIEPNWV 213
Y K +I+SA +F EM ++DV+SW+SM++ Y+ +G+ + ++ M+ +PN V
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T++S +AC +S L G ++H+ + +++ ++ A++ Y KC S + A +F+ +
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV------------------------ 309
+KD V + + GY G+ ++M +F M S G+
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 310 -------RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
RP+ V L +L +++ L+ +HAF ++G DNN Y+ S+I+ YAK
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
+ A +VF + ++ W++II AY HG + A LF QM KP+ VT ++L
Sbjct: 416 FLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG-TKPDDVTLTAVL 474
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
SA +H+G + IFD M+ KY + P EHY MV +L R G+L A++ I+ MP+
Sbjct: 475 SAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPI 534
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
VWGALL + ++++ A LF ++P + G YT+++N+Y W A +R+
Sbjct: 535 AKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNK 594
Query: 543 IKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQLKIE 602
+K LKK+ G S +E + + SF+A D + S +++E++ L M ++ Y + +++
Sbjct: 595 MKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIRKQELD 654
Query: 603 E 603
E
Sbjct: 655 E 655
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 34/357 (9%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVG---RMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
ARPDS ++S LK+ G +G R +HGF+ + D D+FVG+ +I Y+KC +
Sbjct: 125 ARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIE 184
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
A +VF E + DVV W S+++GY +SG+ E + M + P+ VT++S AC
Sbjct: 185 SARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
Q SD G +H + + LSL N+++ Y K GS+ A LF EM +KD +++
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 182 SMLACYADNGAATNALDLFN-------------------------------EMIDKRIEP 210
++++ Y +G A+ LF+ EMI P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N VTL S L + +S L+ G++IH A+ G + V+T+++D Y K A +F
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+ + ++AW + YA G + + +F M G +PD V L +L+A + G
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 289/546 (52%), Gaps = 9/546 (1%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE-MNDAVEVFMEYPKPD 74
L++C + G H + K L+ D VG++L+ LY K G M + VF D
Sbjct: 68 LQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKD 127
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIH 134
+ WTS+++GY AL F M + + TL SA AC++L + +LGR H
Sbjct: 128 AISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 135 GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAAT 194
G V G + + ++++L LYG A +F EMP+ DVI W+++L+ ++ N
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 195 NALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
AL LF M K + P+ T + L AC + L++G++IH ++ G V ++L
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 306
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+DMY KC S A +FN + KK+ V+W+ L GGY + G K++E+F M D
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDL 362
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
+L A + L ++ +H + G N + ++LI++Y K ID+A++V+
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
M+ ++++ W+++++A +G+GEEA+ F M +KP+ ++FI+IL+AC H G+V+E
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYISFIAILTACGHTGMVDE 481
Query: 434 GITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGAC 493
G F +M Y + P +EHY M+DLLGR G + A +++ + +WG LLG C
Sbjct: 482 GRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPC 541
Query: 494 HIHHNI-KMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
+ + ++ E AK + L+P + Y LLSN+Y +A +R L+ + K +
Sbjct: 542 AANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
Query: 553 GQSMVE 558
GQS ++
Sbjct: 602 GQSWID 607
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 197/379 (51%), Gaps = 6/379 (1%)
Query: 11 TVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
T+S A+K+C L ++ +GR HG + + + F+ S L LY E DA VF E
Sbjct: 165 TLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM 224
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
P+PDV+ WT++++ + ++ E AL F M + + PD T + +AC L K G
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
+ IHG + G+ +++ + +SLL++YGK GS++ A +F M K+ +SWS++L Y N
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
G A+++F EM +K + + L+ACA + + G++IH V G V
Sbjct: 345 GEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
+AL+D+Y K ++A +++++ ++++ W + A+ G +++ F +M+ G++
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSIDNA-N 368
PD ++ + ILTA G++ + + KS G + +I++ + + A N
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Query: 369 KVFRGMAYKDVVIWSSIIA 387
+ R D +W ++
Sbjct: 521 LLERAECRNDASLWGVLLG 539
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 199/392 (50%), Gaps = 15/392 (3%)
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG-SIKS 164
E+ P S C ++ G H V + GL+T ++ NSLL+LY K G ++
Sbjct: 56 EIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE 115
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
+F KD ISW+SM++ Y AL++F EM+ ++ N TL SA++AC+
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
+ GR H + +++GFE +S+ L +Y P +A +F+ +P+ DV+ W +
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAV 235
Query: 285 FGGYAETGMAHKSMEVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
+++ + +++ +F M G+ PD +LTA L L+Q +H + +G
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFY 403
+N + +SL++MY KC S+ A +VF GM+ K+ V WS+++ Y +G+ E+A+++F
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 404 QMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNK---YQLMPDSEHYGIMVDL 460
+M DL F ++L AC+ V G I V + ++ +S ++DL
Sbjct: 356 EM-EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA----LIDL 406
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
G+ G +D A + + M ++ W A+L A
Sbjct: 407 YGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 161/295 (54%), Gaps = 7/295 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T L +C L++L+ G+ IHG L + ++ V S+L+++Y KCG + +A +V
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F K + V W++++ GY ++G E A+ F M EE D + ACA L+
Sbjct: 323 FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM---EE--KDLYCFGTVLKACAGLAA 377
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+LG+ IHG R G ++ + ++L++LYGK+G I SA ++ +M +++I+W++ML+
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL-AVSYGFEL 245
A NG A+ FN+M+ K I+P++++ ++ L AC ++EGR L A SYG +
Sbjct: 438 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKP 497
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSME 299
T + ++D+ + E A ++ R + D W VL G A A + E
Sbjct: 498 GTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAE 552
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 11/307 (3%)
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
G T A+ + N I S L+ C G + H V G E + V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 251 TALMDMYLKCSSP-ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH-KSMEVFCNMLSDG 308
+L+ +Y K +F+ KD ++W + GY TG H K++EVF M+S G
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV-TGKEHVKALEVFVEMVSFG 158
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
+ + L + A SELG ++ C H V GF+ N +I ++L +Y +A
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 369 KVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+VF M DV+ W+++++A+ + EEAL LFY M L P+ TF ++L+AC +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 429 GLVEEGITIFDIMVNK---YQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
+++G I ++ ++ +S ++D+ G+ G + A + N M +
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESS----LLDMYGKCGSVREARQVFNGMSKKNSVS- 333
Query: 486 WGALLGA 492
W ALLG
Sbjct: 334 WSALLGG 340
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 287/547 (52%), Gaps = 3/547 (0%)
Query: 25 LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTG 84
LE G+ IH + + ++ + ++L++ YS+ +M DAV V + DV LWTS+V+G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 85 YERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDT 144
+ R+ + A+ F M L + P+ T + S C+ + G+ IH + G +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 145 HLSLANSLLNLYGK-TGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM 203
+ N+L+++Y K + S A +F M +V+SW++++ D+G + L EM
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
+ + +EPN VTL LRAC+ ++ +IH + + E V +L+D Y
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
+ A ++ + ++D + + L + E G ++ V M DG+R D ++L ++A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
+ LG L+ LH + KSGF + SL++MY+KC S+++A KVF +A DVV W+
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
+++ +G AL F +M + +P+ VTF+ +LSACS+ L + G+ F +M
Sbjct: 599 GLVSGLASNGFISSALSAFEEM-RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGE 503
Y + P EHY +V +LGR G L+ A ++ M ++ ++ LL AC N+ +GE
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 504 VAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEV 563
A L P+ Y LL+++Y A K R+L+ E RL K LG+S VE++ +V
Sbjct: 718 DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKV 777
Query: 564 HSFVASD 570
HSFV+ D
Sbjct: 778 HSFVSED 784
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 243/493 (49%), Gaps = 10/493 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + P+ T S ++SC GL+ + G +HG + K +G+ VGS+L +LYSKCG+
Sbjct: 116 MASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQF 175
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+A E+F D + WT +++ + AL F+S M V V P+ T V A
Sbjct: 176 KEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGA 234
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
+ L + G++IH + G+ ++ L SL++ Y + ++ A + ++DV W
Sbjct: 235 SSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+S+++ + N A A+ F EM ++PN T + L C++ L+ G++IH +
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 241 YGFELETTVSTALMDMYLKCSSPE-NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
GFE T V AL+DMY+KCS+ E A +F + +VV+W L G + G
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG 413
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
+ M+ V P+ V L +L A S+L +++ + +HA++ + D +G SL++ YA
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+D A V R M +D + ++S++ + G+ E AL + M ++ ++++
Sbjct: 474 SSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG-IRMDQLSLP 532
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
+SA ++ G +E G + V K + +VD+ + G L+ A + +
Sbjct: 533 GFISASANLGALETGKHLHCYSV-KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI-- 589
Query: 480 QAGPHV--WGALL 490
A P V W L+
Sbjct: 590 -ATPDVVSWNGLV 601
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 227/473 (47%), Gaps = 15/473 (3%)
Query: 17 KSCVGLQKL------EVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
KSC+ + +G IH + K L ++ + + L+ LY K + +A ++F E
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
V WT +++ + +S AL+ F M + P+ T S +CA L D G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEM-MASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
+HG V + G + + + +SL +LY K G K A LF + + D ISW+ M++
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGA 203
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
AL ++EM+ + PN T V L A +S LE G+ IH + G L +
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
T+L+D Y + S E+AV + N ++DV W + G+ A +++ F M S G++
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID-NANK 369
P+ IL+ S + L +H+ K GF+++ +G +L++MY KCS+ + A++
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
VF M +VV W+++I HG ++ L +M +++PN VT +L ACS
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR-EVEPNVVTLSGVLRACSKLR 441
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHY--GIMVDLLGRMGELDRALDIINNMPMQ 480
V + I ++ ++ D E +VD ++D A ++I +M +
Sbjct: 442 HVRRVLEIHAYLLRRH---VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 174/330 (52%), Gaps = 6/330 (1%)
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F SR L + + ++S + + S++G IH V + GL +L L N+LL+LY
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCES----NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLY 68
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
KT I +A LF EM + V +W+ M++ + + +AL LF EM+ PN T
Sbjct: 69 LKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFS 128
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
S +R+CA + G ++H + GFE + V ++L D+Y KC + A ++F+ +
Sbjct: 129 SVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA 188
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
D ++W ++ ++++ + M+ GV P+ VK+L A S LG L+ +H
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGE 396
+ + G N + SL++ Y++ S +++A +V +DV +W+S+++ + + + +
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACS 426
EA+ F +M + L+PN T+ +ILS CS
Sbjct: 308 EAVGTFLEMRSLG-LQPNNFTYSAILSLCS 336
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R D ++ + + L LE G+ +H + K G V ++L+++YSKCG + DA +
Sbjct: 525 RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF E PDVV W +V+G +G AL+ F M ++E PD VT + SAC+
Sbjct: 585 VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR-MKETEPDSVTFLILLSACSNGR 643
Query: 126 DSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSA 165
+ LG +K+ ++ + L+ + G+ G ++ A
Sbjct: 644 LTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 272/525 (51%), Gaps = 45/525 (8%)
Query: 32 HGFLKKENLDGDMFVGSALIELYSKCGE---MNDAVEVFMEYPKPDVVLWTSIVTGYERS 88
H F+ K L D F S L+ + E ++ A + P+ S++ Y S
Sbjct: 59 HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANS 118
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSL 148
TPE+AL F M +L V PD + ACA + GR IHG + GL T + +
Sbjct: 119 STPEVALTVFREM-LLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFV 177
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
N+L+N+YG++G + A + MP +D +SW+S+L+ Y + G A LF+EM ++ +
Sbjct: 178 ENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNV 237
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
E +W ++S A+A ++E + +
Sbjct: 238 E-SWNFMISGY---AAAGLVKEAK-----------------------------------E 258
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV-RPDAVALVKILTAISELG 327
+F+ +P +DVV+W + YA G ++ +EVF ML D +PD LV +L+A + LG
Sbjct: 259 VFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
L Q +H ++ K G + ++ +L++MY+KC ID A +VFR + +DV W+SII+
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
HG G++AL++F +M + KPN +TFI +LSAC+H G++++ +F++M + Y++
Sbjct: 379 DLSVHGLGKDALEIFSEMV-YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRV 437
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P EHYG MVDLLGRMG+++ A +++N +P + +LLGAC ++ E A
Sbjct: 438 EPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIAN 497
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
L L+ + Y +SN+Y D W R ++ R+ + L
Sbjct: 498 RLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 208/472 (44%), Gaps = 77/472 (16%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD ++ + LK+C E GR IHG K L D+FV + L+ +Y + G A +V
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
P D V W S+++ Y G + A A F M EE
Sbjct: 198 LDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM---EE-------------------- 234
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
R++ + N +++ Y G +K A+ +F MP +DV+SW++M+
Sbjct: 235 ----RNVESW-------------NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 187 YADNGAATNALDLFNEMIDKRIE-PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
YA G L++FN+M+D E P+ TLVS L ACAS L +G +H +G E+
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
E ++TAL+DMY KC + A+++F K+DV W + + G+ ++E+F M+
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
+G +P+ + + +L+A + +G+L QA L EM + ++
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQA-------------------RKLFEMMSSVYRVE 438
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+ + ++ G G+ EEA ++ N + S+L AC
Sbjct: 439 -----------PTIEHYGCMVDLLGRMGKIEEA----EELVNEIPADEASILLESLLGAC 483
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
G +E+ I + ++ + DS Y M +L G ++ +D NM
Sbjct: 484 KRFGQLEQAERIANRLLELN--LRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+T +PD T+ L +C L L G +H ++ K ++ + F+ +AL+++YSKCG+++
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A+EVF K DV W SI++ G + AL FS M V E P+ +T + SAC
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGITFIGVLSACN 416
Query: 123 QLSDSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
+ R + + ++ + +++L G+ G I+ AE L E+P D+ I
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILL 476
Query: 181 SSMLACYADNGAATNALDLFNEMID 205
S+L G A + N +++
Sbjct: 477 ESLLGACKRFGQLEQAERIANRLLE 501
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 301/593 (50%), Gaps = 41/593 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ +T+ L+ C L L G IHG K D D+ V + L+ +Y++C +++A
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 66 VF--MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+F ME K +V WTS++TGY ++G A+ F R E + T S +ACA
Sbjct: 182 LFETMEGEKNNVT-WTSMLTGYSQNGFAFKAIECF-RDLRREGNQSNQYTFPSVLTACAS 239
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+S ++G +H + + G T++ + ++L+++Y K ++SA L M DV+SW+SM
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSM 299
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA-SASYLEEGRKIHQLAVSYG 242
+ G AL +F M ++ ++ + T+ S L A S + ++ H L V G
Sbjct: 300 IVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG 359
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
+ V+ AL+DMY K ++A+ +F + +KDV++W L G G +++++FC
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
NM G+ PD + +L+A +EL +L+ +H KSGF ++ + SL+ MY KC
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
S+++AN +F M +D++ W+ +I Y +G
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYAKNG----------------------------- 510
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
L+E+ FD M Y + P EHY M+DL GR G+ + +++ M ++
Sbjct: 511 -------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPD 563
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
VW A+L A H NI+ GE AAK L L+PN+A Y LSN+Y AA +R L
Sbjct: 564 ATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRL 623
Query: 543 IKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+K + K G S VE K +VHSF++ DR H +I+ + ++ + ++E Y
Sbjct: 624 MKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 676
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 179/354 (50%), Gaps = 27/354 (7%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
N+++ Y + + AE LFR P K+ ISW+++++ Y +G+ A +LF EM I+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
PN TL S LR C S L G +IH + GF+L+ V L+ MY +C A +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 270 FNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
F + +K+ V W + GY++ G A K++E F ++ +G + + +LTA + +
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
+ V +H + KSGF N Y+ ++LI+MYAKC +++A + GM DVV W+S+I
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL------------SACSHAGLVEEGIT 436
G EAL +F +M + D+K + T SIL ++ +H +V+ G
Sbjct: 303 CVRQGLIGEALSMFGRM-HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 437 IFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
+ ++ N +VD+ + G +D AL + M ++ W AL+
Sbjct: 362 TYKLVNNA------------LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
+ +E+ ++I Y+ + +A K+FR K+ + W+++I+ Y G EA LF++
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITI--------FDIMVN 443
M + +KPN+ T S+L C+ L+ G I FD+ VN
Sbjct: 116 MQSDG-IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 280/547 (51%), Gaps = 49/547 (8%)
Query: 34 FLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPEL 93
+L K + +F + +I + G+++ A+ VF + + W S++ G
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG--------- 101
Query: 94 ALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
+S DP ++ A QL D + N +L
Sbjct: 102 -------------ISKDPSRMMEAH----QLFDEIPEPDTFSY-------------NIML 131
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
+ Y + + + A+ F MP KD SW++M+ YA G A +LF M++K E +W
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN-EVSWN 190
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
++S C LE+ ++A G TA++ Y+K E A +F +
Sbjct: 191 AMISGYIECGD---LEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDM 243
Query: 274 P-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
K++V W + GY E +++F ML +G+RP++ L L SEL LQ
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 333 VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+H V+KS N+ SLI MY KC + +A K+F M KDVV W+++I+ Y H
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G ++AL LF +M ++ ++P+ +TF+++L AC+HAGLV G+ F+ MV Y++ P +
Sbjct: 364 GNADKALCLFREMIDNK-IRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPL 512
HY MVDLLGR G+L+ AL +I +MP + V+G LLGAC +H N+++ E AA+ L L
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 513 DPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRF 572
+ +A Y L+NIY W + A++R +KE+ + KV G S +E++N+VH F +SDR
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 573 HDESDQI 579
H E D I
Sbjct: 543 HPELDSI 549
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+S +S AL C L L++GR IH + K L D+ ++LI +Y KCGE+ DA +
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F K DVV W ++++GY + G + AL F M + ++ PD +T V+ AC
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAG 399
Query: 126 DSKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
+G + V+ ++ +++L G+ G ++ A L R MP
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 300/562 (53%), Gaps = 30/562 (5%)
Query: 41 DGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSR 100
D ++ + L+ Y K GE+++A +VF P+ +VV WT++V GY +G ++A + F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 101 MAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL-----DTHLSLANSLLNL 155
M +VS V L+ L D ++ + C L D S+++
Sbjct: 136 MPEKNKVSW-TVMLIGF------LQDGRIDDA-------CKLYEMIPDKDNIARTSMIHG 181
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
K G + A +F EM ++ VI+W++M+ Y N +A +F+ M +K E +W ++
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-TEVSWTSM 240
Query: 216 VSALRACASASYLEEGRKIHQLAVSYGFELETTVS-TALMDMYLKCSSPENAVDIFNRIP 274
+ Y++ GR + ++ ++ A++ + A +F+ +
Sbjct: 241 L--------MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
+++ +W + + G +++++F M GVRP L+ IL+ + L L
Sbjct: 293 ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+HA + + FD + Y+ + L+ MY KC + + +F KD+++W+SII+ Y HG
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHY 454
GEEALK+F +M KPN+VTF++ LSACS+AG+VEEG+ I++ M + + + P + HY
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 455 GIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDP 514
MVD+LGR G + A+++I++M ++ VWG+LLGAC H + + E AK L ++P
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 515 NHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD-RFH 573
++G Y LLSN+Y W + A+LR L+K ++K G S E++N+VH+F H
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSH 592
Query: 574 DESDQIFEVLRKLDVKMREECY 595
E + I ++L +LD +RE Y
Sbjct: 593 PEQESILKILDELDGLLREAGY 614
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 61/331 (18%)
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
AN + + G I A LF K + SW+SM+A Y N +A LF+EM D+ I
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+W LVS Y+K + A
Sbjct: 80 -ISWNGLVSG--------------------------------------YMKNGEIDEARK 100
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F+ +P+++VV+W L GY G + +F M + V+ +L + G
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGR 156
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
+ A L+ + D + S+I K +D A ++F M+ + V+ W++++
Sbjct: 157 IDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG 212
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNK--VTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
YG + + ++A K+F D+ P K V++ S+L G +E+ +F++M K
Sbjct: 213 YGQNNRVDDARKIF-------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ ++ M+ LG+ GE+ +A + ++M
Sbjct: 266 IACNA-----MISGLGQKGEIAKARRVFDSM 291
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP T+ L C L L G+ +H L + D D++V S L+ +Y KCGE+ +
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F +P D+++W SI++GY G E AL F M + P+ VT V+ SAC+
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 126 DSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ G I+ ++ G+ + ++++ G+ G A + M + D W S+
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 184 L-AC 186
L AC
Sbjct: 508 LGAC 511
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 167/409 (40%), Gaps = 45/409 (11%)
Query: 146 LSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMID 205
+S NS++ Y + A LF EMPD+++ISW+ +++ Y NG A +F+ M +
Sbjct: 48 ISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS-TALMDMYLKCSSPE 264
+ + +W LV Y+ G+ ++ + + VS T ++ +L+ +
Sbjct: 108 RNV-VSWTALVKG--------YVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRID 158
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV------- 317
+A ++ IP KD +A + G + G ++ E+F M V +
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 318 -----KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA-----------SLIEMYAKC 361
KI + E + L +V ++ E + ++I +
Sbjct: 219 VDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQK 278
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
I A +VF M ++ W ++I + +G EAL LF M ++P T ISI
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQG-VRPTFPTLISI 337
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
LS C+ + G + +V + Q D +++ + + GEL ++ I + P +
Sbjct: 338 LSVCASLASLHHGKQVHAQLV-RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK- 395
Query: 482 GPHVWGALLGACHIHHNIKMGEVAAKNL--FPLD----PNHAGYYTLLS 524
+W +++ H +GE A K PL PN + LS
Sbjct: 396 DIIMWNSIISGYASH---GLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 262/457 (57%), Gaps = 5/457 (1%)
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNL--YGKTGSIKSAEILFREM-PDKDVISWSSMLACY 187
R IH V GL H S+ N LL TGS+ A++LF D W+ ++ +
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 188 ADNGAATNALDLFNEMIDKRI-EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+++ + N++ +N M+ + P+ T AL++C + + +IH + GF +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V+T+L+ Y S E A +F+ +P +D+V+W V+ ++ G+ ++++ ++ M +
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
+GV D+ LV +L++ + + L V LH ++ ++ +LI+MYAKC S++N
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A VF GM +DV+ W+S+I YG HG G EA+ F +M S ++PN +TF+ +L CS
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA-SGVRPNAITFLGLLLGCS 320
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
H GLV+EG+ F+IM +++ L P+ +HYG MVDL GR G+L+ +L++I P +W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 487 GALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
LLG+C IH N+++GEVA K L L+ +AG Y L+++IY + A +R LI+ +
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
L+ V G S +E+ ++VH FV D+ H ES I+ L
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 201/400 (50%), Gaps = 15/400 (3%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIEL--YSKCGEMNDAVEVFMEY-PK 72
L+ C ++KL R IH + L + + L+ S G ++ A +F +
Sbjct: 12 LQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P W ++ G+ S +P ++ F++RM + PD T A +C ++
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
IHG V R G +A SL+ Y GS++ A +F EMP +D++SW+ M+ C++ G
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
AL ++ M ++ + + TLV+ L +CA S L G +H++A E VS A
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
L+DMY KC S ENA+ +FN + K+DV+ W + GY G +++ F M++ GVRP+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFD---NNEYIGASLIEMYAKCSSIDNA-N 368
A+ + +L S G++++ V H + S F N ++ G ++++Y + ++N+
Sbjct: 309 AITFLGLLLGCSHQGLVKEGV-EHFEIMSSQFHLTPNVKHYGC-MVDLYGRAGQLENSLE 366
Query: 369 KVFRGMAYKDVVIWSSIIAAYGFHGQ---GEEALKLFYQM 405
++ ++D V+W +++ + H GE A+K Q+
Sbjct: 367 MIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 148/289 (51%), Gaps = 5/289 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ + +RPD T + ALKSC ++ + IHG + + D V ++L+ YS G +
Sbjct: 99 LSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSV 158
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A +VF E P D+V W ++ + G AL+ + RM E V D TLV+ S+
Sbjct: 159 EIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN-EGVCGDSYTLVALLSS 217
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA +S +G +H ++ + ++N+L+++Y K GS+++A +F M +DV++W
Sbjct: 218 CAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTW 277
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+SM+ Y +G A+ F +M+ + PN +T + L C+ ++EG + H +S
Sbjct: 278 NSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMS 336
Query: 241 YGFELETTVS--TALMDMYLKCSSPENAVD-IFNRIPKKDVVAWAVLFG 286
F L V ++D+Y + EN+++ I+ +D V W L G
Sbjct: 337 SQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 303/629 (48%), Gaps = 39/629 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSK--CGEMNDA 63
+P+ +T L +CV + + +G IHG + K +FV ++L+ LY K +D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+++F E P+ DV W ++V+ + G A F M +E D TL + S+C
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM----------- 172
S GR +HG R GL LS+ N+L+ Y K +K E L+ M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 173 --------------------PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
+K+ I++++++A + NG AL LF +M+ + +E
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
+L SA+ AC S + +IH + +G + TAL+DM +C +A ++F++
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 273 IPKK--DVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVL 329
P A + GGYA G+ K++ +F L + + D V+L IL LG
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
+ +H + K+G+ ++ +G SLI MYAKC D+A K+F M DV+ W+S+I+ Y
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH--AGLVEEGITIFDIMVNKYQL 447
G+EAL L+ +M N ++KP+ +T ++SA + + + +F M Y +
Sbjct: 598 ILQRNGDEALALWSRM-NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDI 656
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P +EHY V +LG G L+ A D IN+MP+Q V ALL +C IH N + + AK
Sbjct: 657 EPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAK 716
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFV 567
+ P Y L SNIY WH + +R ++E +K +S + +N++HSF
Sbjct: 717 LILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFH 776
Query: 568 ASDRFHDESDQIFEVLRKLDVKMREECYE 596
A D H + I+ L L ++ + YE
Sbjct: 777 ARDTSHPQEKDIYRGLEILIMECLKVGYE 805
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 239/513 (46%), Gaps = 52/513 (10%)
Query: 25 LEVGRMIHG-FLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVT 83
+EV + +H FLK + +G+ALI Y K G +A+ VF+ P VV +T++++
Sbjct: 96 VEVTKAVHASFLKLR--EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALIS 153
Query: 84 GYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLD 143
G+ R AL F RM V P+ T V+ +AC ++S LG IHG + + G
Sbjct: 154 GFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL 213
Query: 144 THLSLANSLLNLYGKTGSIKSAEI--LFREMPDKDVISWSSMLACYADNGAATNALDLFN 201
+ ++NSL++LY K ++ LF E+P +DV SW+++++ G + A DLF
Sbjct: 214 NSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFY 273
Query: 202 EMIDKRIEPNWV---TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM---- 254
EM R+E V TL + L +C +S L GR++H A+ G E +V+ AL+
Sbjct: 274 EM--NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYS 331
Query: 255 ---DM------------------------YLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
DM Y+ ++AV+IF + +K+ + + L G
Sbjct: 332 KFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAG 391
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTA---ISELGVLQQAVCLHAFVTKSGF 344
+ G K++++F +ML GV +L + A +SE V +Q +H F K G
Sbjct: 392 FCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ---IHGFCIKFGT 448
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMA--YKDVVIWSSIIAAYGFHGQGEEALKLF 402
N I +L++M +C + +A ++F +SII Y +G ++A+ LF
Sbjct: 449 AFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF 508
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLG 462
++ L ++V+ IL+ C G E G I + K D ++ +
Sbjct: 509 HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL-KAGYFSDISLGNSLISMYA 567
Query: 463 RMGELDRALDIINNMPMQAGPHVWGALLGACHI 495
+ + D A+ I N M + W +L+ +C+I
Sbjct: 568 KCCDSDDAIKIFNTM-REHDVISWNSLI-SCYI 598
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 161/328 (49%), Gaps = 12/328 (3%)
Query: 122 AQLSDSKLGRSIHG-FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
AQ D ++ +++H F+K T L N+L++ Y K G + A ++F + V+S+
Sbjct: 91 AQYHDVEVTKAVHASFLKLREEKTRL--GNALISTYLKLGFPREAILVFVSLSSPTVVSY 148
Query: 181 SSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
+++++ ++ AL +F M ++PN T V+ L AC S G +IH L V
Sbjct: 149 TALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIV 208
Query: 240 SYGFELETTVSTALMDMYLK--CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS 297
GF VS +LM +Y K SS ++ + +F+ IP++DV +W + + G +HK+
Sbjct: 209 KSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 298 MEVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++F M +G D+ L +L++ ++ VL + LH + G + +LI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
Y+K + ++ M +D V ++ +I AY G + A+++F + + N +
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT-----EKNTI 383
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNK 444
T+ ++++ G + + +F M+ +
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQR 411
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/676 (28%), Positives = 316/676 (46%), Gaps = 110/676 (16%)
Query: 27 VGRMIHGFLKKENLDG-DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGY 85
+G IHG L K LD D V SA + Y +C + A ++F E PK D + W IV
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 86 ERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTH 145
RSG E A+ F M + D T+V C+ GR IHG+V R GL+++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 146 LSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM-- 203
+S+ NSL+ +Y + G ++ + +F M D+++ SW+S+L+ Y G +A+ L +EM
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 204 ----------------------------IDKRIE-----PNWVTLVSALRACASASYLEE 230
+ KR++ P+ ++ S L+A A +L+
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF----- 285
G+ IH + + V T L+DMY+K A +F+ + K++VAW L
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 286 ------------------------------GGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
GYA G K+++V M GV P+ V+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 316 LVKILTAISELGVLQQAV--------------------------CL---------HAFVT 340
I + S+ G + A+ CL H F
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
+ + Y+ +L++MY K + +A ++F G+ K + W+ ++ Y G+GEE +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 483
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
F M + ++P+ +TF S+LS C ++GLV+EG FD+M ++Y ++P EH MVDL
Sbjct: 484 AFSVML-EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYY 520
LGR G LD A D I M ++ +WGA L +C IH ++++ E+A K L L+P+++ Y
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 521 TLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFH-DESDQI 579
++ N+Y W + ++R+L++ NR++ S +++ VH F A + H DE D
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 580 FEVLRKLDVKMREECY 595
FE L KL +M++ Y
Sbjct: 663 FE-LYKLVSEMKKSGY 677
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 155/370 (41%), Gaps = 77/370 (20%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A +P + ++S L++ L++G+ IHG++ + L D++V + LI++Y K G +
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 63 AVEVF-----------------------------------MEYPKPDVVLWTSIVTGYER 87
A VF E KPD + W S+ +GY
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ------------------------ 123
G PE AL +M + V+P+ V+ + S C++
Sbjct: 339 LGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 124 -----------LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM 172
LS G+ +HGF R L +A +L+++YGK+G ++SA +F +
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
+K + SW+ ML YA G + F+ M++ +EP+ +T S L C ++ ++EG
Sbjct: 458 KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGW 517
Query: 233 KIHQLAVS-YGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAE 290
K L S YG + ++D+ + + A D + K D W G +
Sbjct: 518 KYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW----GAFLS 573
Query: 291 TGMAHKSMEV 300
+ H+ +E+
Sbjct: 574 SCKIHRDLEL 583
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 261/484 (53%), Gaps = 8/484 (1%)
Query: 78 WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
+ ++++ Y P + + F + V SPD T AC + S + G+ IHG V
Sbjct: 74 YNTLLSSYAVCDKPRVTI-FAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNAL 197
+ G + + NSL++ YG G ++A +F EMP +DV+SW+ ++ + G AL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 198 DLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY 257
D F++M +EPN T V L + L G+ IH L + + AL+DMY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM-LSDGVRPDAVAL 316
+KC +A+ +F + KKD V+W + G + +++++F M S G++PD L
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY 376
+L+A + LG + +H ++ +G + +IG ++++MYAKC I+ A ++F G+
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 377 KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGIT 436
K+V W++++ HG G E+L+ F +M KPN VTF++ L+AC H GLV+EG
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 437 IFDIMVNK-YQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHI 495
F M ++ Y L P EHYG M+DLL R G LD AL+++ MP++ + GA+L AC
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 496 HHNI-KMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQ 554
+ ++ + + ++ +G Y LLSNI+ ++ W + A++R L+K + KV G
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 555 SMVE 558
S +E
Sbjct: 549 SYIE 552
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 203/388 (52%), Gaps = 12/388 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T K+C + G+ IHG + K D++V ++L+ Y CGE +A +V
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P DVV WT I+TG+ R+G + AL FS+M +V P+ T V + ++
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATYVCVLVSSGRVGC 219
Query: 127 SKLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
LG+ IHG + KR L L N+L+++Y K + A +F E+ KD +SW+SM++
Sbjct: 220 LSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 186 CYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
+ A+DLF+ M I+P+ L S L ACAS ++ GR +H+ ++ G +
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+T + TA++DMY KC E A++IFN I K+V W L GG A G +S+ F M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQA-VCLHAFVTK--SGFDNNEYIGASLIEMYAKC 361
+ G +P+ V + L A G++ + H ++ + F E+ G +I++ +
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC-MIDLLCRA 457
Query: 362 SSIDNANKVFRGMAYK-DVVIWSSIIAA 388
+D A ++ + M K DV I +I++A
Sbjct: 458 GLLDEALELVKAMPVKPDVRICGAILSA 485
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 153/318 (48%), Gaps = 5/318 (1%)
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
S++++L+ YA + + + P+ T +AC S + EG++IH +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
GF + V +L+ Y C NA +F +P +DVV+W + G+ TG+ +++
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
+ F M V P+ V +L + +G L +H + K + G +LI+MY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 359 AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
KC + +A +VF + KD V W+S+I+ + +EA+ LF M S +KP+
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
S+LSAC+ G V+ G + + ++ + D+ +VD+ + G ++ AL+I N +
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 479 MQAGPHVWGALLGACHIH 496
+ W ALLG IH
Sbjct: 369 SK-NVFTWNALLGGLAIH 385
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD H ++ L +C L ++ GR +H ++ + D +G+A++++Y+KCG + A+E
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F +V W +++ G G +L +F M L P+ VT ++A +AC
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL-GFKPNLVTFLAALNACCHTG 421
Query: 126 DSKLGRS-IHGFVKR-CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSS 182
GR H R L L +++L + G + A L + MP K DV +
Sbjct: 422 LVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGA 481
Query: 183 MLACYADNGAATNALDLFNEMIDKRIE 209
+L+ + G ++L E++D ++
Sbjct: 482 ILSACKNRG---TLMELPKEILDSFLD 505
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 294/565 (52%), Gaps = 46/565 (8%)
Query: 66 VFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F+ + P P+V ++ ++++ S + +S M + VSPD T + A + L
Sbjct: 90 LFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSM-IRHRVSPDRQTFLYLMKASSFL 146
Query: 125 SDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
S+ K IH + G L L NSL+ Y + G+ AE +F MP DV S++ M
Sbjct: 147 SEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG- 242
+ YA G + AL L+ +M+ IEP+ T++S L C S + G+ +H G
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 243 -FELETTVSTALMDMYLKCSSP-------------------------------ENAVDIF 270
+ +S AL+DMY KC E A +F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSM-EVFCNM-LSDGVRPDAVALVKILTAISELGV 328
+++PK+D+V+W L GY++ G +++ E+F M + + V+PD V +V +++ + G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L +H V + + ++ ++LI+MY KC I+ A VF+ KDV +W+S+I
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
FHG G++AL+LF +M + PN VT +++L+ACSH+GLVEEG+ +F+ M +K+
Sbjct: 444 LAFHGNGQQALQLFGRM-QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFD 502
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIIN-NMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P++EHYG +VDLL R G ++ A DI+ MPM+ +WG++L AC +I+ E+A
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALT 562
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFV 567
L L+P G Y LLSNIY W + K R ++ +KK G S V +H FV
Sbjct: 563 ELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFV 622
Query: 568 ASDRF-HDESDQIFEVLRKLDVKMR 591
A+++ H +I +L+ L +M+
Sbjct: 623 AAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 198/384 (51%), Gaps = 43/384 (11%)
Query: 45 FVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVL 104
++ ++L++ Y + G A +VF P PDV + ++ GY + G AL + +M V
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM-VS 225
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCG--LDTHLSLANSLLNLYGKT--- 159
+ + PD T++S C LSD +LG+ +HG+++R G ++L L+N+LL++Y K
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 160 ----------------------------GSIKSAEILFREMPDKDVISWSSMLACYADNG 191
G +++A+ +F +MP +D++SW+S+L Y+ G
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 192 AATNAL-DLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
+ +LF EM I ++++P+ VT+VS + A+ L GR +H L + + + +
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
S+AL+DMY KC E A +F +KDV W + G A G +++++F M +GV
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV 465
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAF---VTKSGFDNNEYIGASLIEMYAKCSSIDN 366
P+ V L+ +LTA S G++++ LH F K GFD SL+++ + ++
Sbjct: 466 TPNNVTLLAVLTACSHSGLVEEG--LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 367 ANKVF-RGMAYK-DVVIWSSIIAA 388
A + + M + +W SI++A
Sbjct: 524 AKDIVQKKMPMRPSQSMWGSILSA 547
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 152/301 (50%), Gaps = 35/301 (11%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKEN--LDGDMFVGSALIELYSKC------- 57
PD +TV L C L + +G+ +HG++++ ++ + +AL+++Y KC
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 58 ------------------------GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPEL 93
G+M A VF + PK D+V W S++ GY + G +
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 94 AL-AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
+ F M ++E+V PD VT+VS S A + GR +HG V R L L+++L
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 153 LNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
+++Y K G I+ A ++F+ +KDV W+SM+ A +G AL LF M ++ + PN
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 213 VTLVSALRACASASYLEEGRKI-HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFN 271
VTL++ L AC+ + +EEG + + + +GF+ ET +L+D+ + E A DI
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 272 R 272
+
Sbjct: 530 K 530
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T+ + +L GR +HG + + L GD F+ SALI++Y KCG + A
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + DV LWTS++TG G + AL F RM E V+P+ VTL++ +AC+
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE-EGVTPNNVTLLAVLTACSHSG 483
Query: 126 DSKLGRSIHGFVK-RCGLDTHLSLANSLLNLYGKTGSIKSA-EILFREMPDKDVIS-WSS 182
+ G + +K + G D SL++L + G ++ A +I+ ++MP + S W S
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 183 ML-ACYADNGAATNALDLFNEMIDKRIEP 210
+L AC T L L E++ ++EP
Sbjct: 544 ILSACRGGEDIETAELAL-TELL--KLEP 569
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 247/467 (52%), Gaps = 32/467 (6%)
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
A+I+F D W+ M+ ++ + +L L+ M+ N T S L+AC++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMY--------------------------- 257
S EE +IH G+E + +L++ Y
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 258 ----LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+K + A+ +F ++ +K+ ++W + GY + M +++++F M + V PD
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
V+L L+A ++LG L+Q +H+++ K+ + +G LI+MYAKC ++ A +VF+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
+ K V W+++I+ Y +HG G EA+ F +M +KPN +TF ++L+ACS+ GLVEE
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVLTACSYTGLVEE 366
Query: 434 GITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGAC 493
G IF M Y L P EHYG +VDLLGR G LD A I MP++ +WGALL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 494 HIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLG 553
IH NI++GE + L +DP H G Y +NI+ +DK W AA+ R L+KE + KV G
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 554 QSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQLK 600
S + L+ H F+A DR H E ++I R + K+ E Y +L+
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELE 533
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 45/372 (12%)
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + +PD LW ++ G+ S PE +L + RM + + T S AC+ LS
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRM-LCSSAPHNAYTFPSLLKACSNLS 129
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF---------------- 169
+ IH + + G + + NSL+N Y TG+ K A +LF
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 170 ---------------REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
R+M +K+ ISW++M++ Y AL LF+EM + +EP+ V+
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
L +AL ACA LE+G+ IH +++ + L+DMY KC E A+++F I
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
KK V AW L GYA G +++ F M G++P+ + +LTA S G++++
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 335 LHAFVTKSGFDNN-----EYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAA 388
+ + + D N E+ G ++++ + +D A + + M K + VIW +++ A
Sbjct: 370 IFYSMER---DYNLKPTIEHYGC-IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 389 YGFHGQ---GEE 397
H GEE
Sbjct: 426 CRIHKNIELGEE 437
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 36/330 (10%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
++A +++T LK+C L E IH + K + D++ ++LI Y+ G
Sbjct: 109 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA-------------------- 102
A +F P+PD V W S++ GY ++G ++AL F +MA
Sbjct: 169 AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 103 --VLE--------EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
L+ +V PD V+L +A SACAQL + G+ IH ++ + + L L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 153 LNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
+++Y K G ++ A +F+ + K V +W+++++ YA +G A+ F EM I+PN
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS--TALMDMYLKCSSPENAVDIF 270
+T + L AC+ +EEG+ I ++ + L+ T+ ++D+ + + A
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI 407
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+P K AV++G + HK++E+
Sbjct: 408 QEMPLKPN---AVIWGALLKACRIHKNIEL 434
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 162/353 (45%), Gaps = 42/353 (11%)
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE--- 264
+E N +S L+ C+ EE ++IH + G ++ T + + +S +
Sbjct: 10 LEHNLYETMSCLQRCSKQ---EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
A +F+ + D W ++ G++ + +S+ ++ ML +A +L A S
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA------------------------- 359
L ++ +HA +TK G++N+ Y SLI YA
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 360 ------KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKP 413
K +D A +FR MA K+ + W+++I+ Y +EAL+LF++M N SD++P
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN-SDVEP 245
Query: 414 NKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDI 473
+ V+ + LSAC+ G +E+G I + NK ++ DS +++D+ + GE++ AL++
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYL-NKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 474 INNMPMQAGPHVWGALLG--ACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLS 524
N+ ++ W AL+ A H H + + + PN + +L+
Sbjct: 305 FKNIKKKS-VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 276/493 (55%), Gaps = 12/493 (2%)
Query: 98 FSRMAVLEEV-SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F++ + ++ V + +P+ L+S ++ +L I + + ++ +S L+N
Sbjct: 18 FTKHSKIDTVNTQNPILLISKCNSLREL------MQIQAYAIKSHIED-VSFVAKLINFC 70
Query: 157 GKT---GSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
++ S+ A LF M + D++ ++SM Y+ LF E+++ I P+
Sbjct: 71 TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T S L+ACA A LEEGR++H L++ G + V L++MY +C ++A +F+RI
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
+ VV + + GYA ++++ +F M ++P+ + L+ +L++ + LG L
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
+H + K F + +LI+M+AKC S+D+A +F M YKD WS++I AY HG
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
+ E+++ +F +M + +++P+++TF+ +L+ACSH G VEEG F MV+K+ ++P +H
Sbjct: 311 KAEKSMLMFERMRSE-NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 454 YGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLD 513
YG MVDLL R G L+ A + I+ +P+ P +W LL AC H+N+ + E ++ +F LD
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 514 PNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFH 573
+H G Y +LSN+Y +K W LR ++K+ + KV G S +E+ N VH F + D
Sbjct: 430 DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVK 489
Query: 574 DESDQIFEVLRKL 586
+ ++ L ++
Sbjct: 490 SATTKLHRALDEM 502
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 181/345 (52%), Gaps = 5/345 (1%)
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE-VSPDPVTLVSAA 118
M+ A +F +PD+V++ S+ GY R P + F + +LE+ + PD T S
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLF--VEILEDGILPDNYTFPSLL 136
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
ACA + GR +H + GLD ++ + +L+N+Y + + SA +F + + V+
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
+++M+ YA AL LF EM K ++PN +TL+S L +CA L+ G+ IH+ A
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ F V+TAL+DM+ KC S ++AV IF ++ KD AW+ + YA G A KSM
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEM 357
+F M S+ V+PD + + +L A S G +++ V+K G + S++++
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 358 YAKCSSIDNANKVFRGMAYKDV-VIWSSIIAAYGFHGQGEEALKL 401
++ ++++A + + ++W ++AA H + A K+
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 154/283 (54%), Gaps = 3/283 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD++T LK+C + LE GR +H K LD +++V LI +Y++C +++ A V
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F +P VV + +++TGY R P AL+ F M + + P+ +TL+S S+CA L
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGS 245
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG+ IH + K+ ++ + +L++++ K GS+ A +F +M KD +WS+M+
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYGFEL 245
YA++G A ++ +F M + ++P+ +T + L AC+ +EEGRK Q+ +G
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
+++D+ + + E+A + +++P + W +L
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ T+ L SC L L++G+ IH + KK + + V +ALI++++KCG ++DAV
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + D W++++ Y G E ++ F RM E V PD +T + +AC+
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENVQPDEITFLGLLNACSHTG 345
Query: 126 DSKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ GR V + G+ + S+++L + G+++ A ++P + W +
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 184 LACYADNGAATNALDLFNEMIDKRI 208
LA + + N LDL E + +RI
Sbjct: 406 LAACSSH----NNLDL-AEKVSERI 425
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 303/571 (53%), Gaps = 7/571 (1%)
Query: 25 LEVGRM--IHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIV 82
LE+ ++ +H F D D+ V ++++ LY KC + DA ++F + + D+V W +++
Sbjct: 158 LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMI 217
Query: 83 TGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL 142
+GY G L RM + + PD T ++ S + D ++GR +H + + G
Sbjct: 218 SGYASVGNMSEILKLLYRMRG-DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 143 DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNE 202
D + L +L+ +Y K G +++ + +P+KDV+ W+ M++ G A AL +F+E
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 203 MIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSS 262
M+ + + + S + +CA + G +H + +G+ L+T +L+ MY KC
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 263 PENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP-DAVALVKILT 321
+ ++ IF R+ ++D+V+W + GYA+ K++ +F M V+ D+ +V +L
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVI 381
A S G L +H V +S + +L++MY+KC ++ A + F +++KDVV
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS 516
Query: 382 WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
W +IA YGFHG+G+ AL+++ + HS ++PN V F+++LS+CSH G+V++G+ IF M
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFL-HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 442 VNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKM 501
V + + P+ EH +VDLL R ++ A + V G +L AC + ++
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635
Query: 502 GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKN 561
++ +++ L P AG+Y L + + K W + ++ + ++ LKK+ G S +E+
Sbjct: 636 EDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNG 695
Query: 562 EVHSFVASDRFHDESDQIFEVLRKLDVKMRE 592
+ +F + H SD +L+ L +M +
Sbjct: 696 KTTTFFMNHTSH--SDDTVSLLKLLSREMMQ 724
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 266/521 (51%), Gaps = 8/521 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T LK+C LQ+L G IH + D ++ S+L+ LY+K G + A +V
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E + DVV WT+++ Y R+G A + + M + + P PVTL+ S +++
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR-FQGIKPGPVTLLEMLSGVLEITQ 162
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ +H F G D +++ NS+LNLY K + A+ LF +M +D++SW++M++
Sbjct: 163 LQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA G + L L M + P+ T ++L + LE GR +H V GF+++
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+ TAL+ MYLKC E + + IP KDVV W V+ G G A K++ VF ML
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G + A+ ++ + ++LG +H +V + G+ + SLI MYAKC +D
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
+ +F M +D+V W++II+ Y + +AL LF +M + + + T +S+L ACS
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
AG + G I I++ + + P S +VD+ + G L+ A +++ + W
Sbjct: 460 SAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-W 517
Query: 487 GALLGACHIHHNIKMG-EVAAKNLFP-LDPNHAGYYTLLSN 525
G L+ H + E+ ++ L ++PNH + +LS+
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 197/370 (53%), Gaps = 5/370 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD T +L + LE+GRM+H + K D DM + +ALI +Y KCG+ +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP-DPVTLVSAASACAQL 124
V P DVV WT +++G R G E AL FS M L+ S + S ++CAQL
Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM--LQSGSDLSSEAIASVVASCAQL 359
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
LG S+HG+V R G NSL+ +Y K G + + ++F M ++D++SW++++
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 185 ACYADNGAATNALDLFNEMIDKRIEP-NWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ YA N AL LF EM K ++ + T+VS L+AC+SA L G+ IH + +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ V TAL+DMY KC E A F+ I KDVV+W +L GY G ++E++
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
L G+ P+ V + +L++ S G++QQ + + V G + N A ++++ +
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAK 599
Query: 363 SIDNANKVFR 372
I++A K ++
Sbjct: 600 RIEDAFKFYK 609
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 162/328 (49%), Gaps = 41/328 (12%)
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+ +G L F+ M+ ++ P+ T S L+ACAS L G IHQ + GF +
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDF 81
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
+S++L+++Y K +A +F + ++DVV W + G Y+ G+ ++ + M
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
G++P V L+++L+ + E+ LQ CLH F GFD + + S++ +Y KC + +A
Sbjct: 142 GIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDA 198
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS- 426
+F M +D+V W+++I+ Y G E LKL Y+M L+P++ TF + LS
Sbjct: 199 KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTFGASLSVSGT 257
Query: 427 ----------HAGLVEEGITIFDI-------MVNKY-------------QLMPDSE--HY 454
H +V+ G FD+ ++ Y + +P+ + +
Sbjct: 258 MCDLEMGRMLHCQIVKTG---FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 455 GIMVDLLGRMGELDRALDIINNMPMQAG 482
+M+ L R+G ++AL + + M +Q+G
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEM-LQSG 341
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 262/480 (54%), Gaps = 49/480 (10%)
Query: 165 AEILFREMPDKDVISWSSMLACYA--DNGAATNALDLFNEMI-DKRIEPNWVTLVSALRA 221
A +F +MP ++ SW++++ ++ D A A+ LF EM+ D+ +EPN T S L+A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA--------------- 266
CA ++EG++IH LA+ YGF + V + L+ MY+ C ++A
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 267 -----------------VD-------------IFNRIPKKDVVAWAVLFGGYAETGMAHK 296
+D +F+++ ++ VV+W + GY+ G
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++EVF M +RP+ V LV +L AIS LG L+ LH + SG ++ +G++LI+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
MY+KC I+ A VF + ++V+ WS++I + HGQ +A+ F +M + ++P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDV 376
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINN 476
+I++L+ACSH GLVEEG F MV+ L P EHYG MVDLLGR G LD A + I N
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436
Query: 477 MPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNA 536
MP++ +W ALLGAC + N++MG+ A L + P+ +G Y LSN+Y NW
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496
Query: 537 AKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
+++R +KE ++K G S++++ +H FV D H ++ +I +L ++ K+R Y
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 190/403 (47%), Gaps = 54/403 (13%)
Query: 59 EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPE--LALAFFSRMAVLEEVSPDPVTLVS 116
+++ A ++F + P+ + W +I+ G+ S + +A+ F M E V P+ T S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 117 AASACAQLSDSKLGRSIHGFVKR-------------------CGL--------------- 142
ACA+ + G+ IHG + CG
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 143 -----------DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
D + L N +++ Y + G K+A +LF +M + V+SW++M++ Y+ NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
+A+++F EM I PN+VTLVS L A + LE G +H A G ++ + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
AL+DMY KC E A+ +F R+P+++V+ W+ + G+A G A +++ FC M GVRP
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 312 DAVALVKILTAISELGVLQQA-VCLHAFVTKSGFDNN-EYIGASLIEMYAKCSSIDNANK 369
VA + +LTA S G++++ V+ G + E+ G ++++ + +D A +
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC-MVDLLGRSGLLDEAEE 432
Query: 370 VFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQMANH 408
M K D VIW +++ A G G+ + M H
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPH 475
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 47/359 (13%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T LK+C K++ G+ IHG K GD FV S L+ +Y CG M DA +
Sbjct: 126 PNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 67 F------------MEYPKPD--VVLWTSIVTGYERSGTPELALAFFSRM----------- 101
F + K D +VLW ++ GY R G + A F +M
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 102 --------------AVLEE-----VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL 142
V E + P+ VTLVS A ++L +LG +H + + G+
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 143 DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNE 202
L ++L+++Y K G I+ A +F +P ++VI+WS+M+ +A +G A +A+D F +
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
Query: 203 MIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY-GFELETTVSTALMDMYLKCS 261
M + P+ V ++ L AC+ +EEGR+ VS G E ++D+ +
Sbjct: 366 MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG 425
Query: 262 SPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
+ A + +P K D V W L G G V N+L D V D+ A V +
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV-ANILMDMVPHDSGAYVAL 483
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+ T+ L + L LE+G +H + + + D +GSALI++YSKCG + A+
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P+ +V+ W++++ G+ G A+ F +M V P V ++ +AC+
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGG 389
Query: 126 DSKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSM 183
+ GR V GL+ + +++L G++G + AE MP K D + W ++
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 184 L-AC 186
L AC
Sbjct: 450 LGAC 453
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCS----SIDNANKVFRGMAYKDVVIWSSIIAAYG 390
+HA KSG + A ++ A +D A+K+F M ++ W++II G
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR--G 99
Query: 391 FHGQGEE----ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
F E+ A+ LFY+M + ++PN+ TF S+L AC+ G ++EG I
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 287/549 (52%), Gaps = 19/549 (3%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEV 107
+ L+ Y K + +A VF P+ +VV WT++V GY + G A + F RM EV
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
S + D ++ ++ + D S +++ + G + A +
Sbjct: 143 S-------WTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS--TNMIGGLCREGRVDEARL 193
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
+F EM +++V++W++M+ Y N A LF E++ ++ E +W +++
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
EE ++ + A++ + + A +F+ + +D W +
Sbjct: 253 AEEFFEVMPMK-------PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
Y G +++++F M GVRP +L+ IL+ + L LQ +HA + + FD++
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
Y+ + L+ MY KC + A VF + KD+++W+SII+ Y HG GEEALK+F++M +
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+ PNKVT I+IL+ACS+AG +EEG+ IF+ M +K+ + P EHY VD+LGR G++
Sbjct: 426 SGTM-PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 468 DRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIY 527
D+A+++I +M ++ VWGALLGAC H + + EVAAK LF +P++AG Y LLS+I
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544
Query: 528 CVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD-RFHDESDQIFEVLRKL 586
W + A +R ++ N + K G S +E+ +VH F + H E I +L K
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604
Query: 587 DVKMREECY 595
D +RE Y
Sbjct: 605 DGLLREAGY 613
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 16/394 (4%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
D+ + +I + G +++A +F E + +VV WT+++TGY ++ ++A F M
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
EVS + L + ++ D++ F + + ++ N+++ +G+ G I
Sbjct: 231 EKTEVSWTSMLL--GYTLSGRIEDAE------EFFEVMPMKPVIA-CNAMIVGFGEVGEI 281
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
A +F M D+D +W M+ Y G ALDLF +M + + P++ +L+S L C
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWA 282
A+ + L+ GR++H V F+ + V++ LM MY+KC A +F+R KD++ W
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401
Query: 283 VLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTK 341
+ GYA G+ +++++F M S G P+ V L+ ILTA S G L++ + + +K
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEE 397
+ ++M + +D A ++ M K D +W +++ A H + E
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEV 521
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
A K ++ N D V SI ++ S G V
Sbjct: 522 AAKKLFE--NEPDNAGTYVLLSSINASRSKWGDV 553
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 26/324 (8%)
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
+ G I A F + K + SW+S+++ Y NG A LF+EM ++ + +W LVS
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV-VSWNGLVS 87
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
+ E R + +L E TA++ Y++ A +F R+P+++
Sbjct: 88 GY---IKNRMIVEARNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN 140
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
V+W V+FGG + G K+ +++ M D VA ++ + G + +A
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEA----R 192
Query: 338 FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEE 397
+ + N ++I Y + + +D A K+F M K V W+S++ Y G+ E+
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
A + F M +KP + +++ G + + +FD+M ++ D+ + M
Sbjct: 253 AEEFFEVMP----MKP-VIACNAMIVGFGEVGEISKARRVFDLMEDR-----DNATWRGM 302
Query: 458 VDLLGRMGELDRALDIINNMPMQA 481
+ R G ALD+ M Q
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQG 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP ++ L C L L+ GR +H L + D D++V S L+ +Y KCGE+ A
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + D+++W SI++GY G E AL F M P+ VTL++ +AC+
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS-SGTMPNKVTLIAILTACSYAG 446
Query: 126 DSKLGRSIHGFV--KRCGLDT--HLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISW 180
+ G I + K C T H S +++ G+ G + A L M K D W
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCT---VDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 181 SSML-AC 186
++L AC
Sbjct: 504 GALLGAC 510
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 261/498 (52%), Gaps = 20/498 (4%)
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P P LW ++ GY ++ RM PD T C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++G S+HG V R G D + + S ++ YGK + SA +F EMP+++ +SW++++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y +G A +F+ M ++ + +W LV L S + + ++ +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNL-GSWNALVDGL--VKSGDLVNAKKLFDEMP-----KR 236
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ T+++D Y K +A D+F DV AW+ L GYA+ G +++ +VF M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVC------LHAFVTKSGFDNNEYIGASLIEMYA 359
+ V+PD +V +++A S++G + +C LH + K ++ Y+ +LI+M A
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFE--LCEKVDSYLHQRMNKF---SSHYVVPALIDMNA 351
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
KC +D A K+F M +D+V + S++ HG G EA++LF +M + + P++V F
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG-IVPDEVAFT 410
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
IL C + LVEEG+ F++M KY ++ +HY +V+LL R G+L A ++I +MP
Sbjct: 411 VILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Query: 480 QAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
+A WG+LLG C +H N ++ EV A++LF L+P AG Y LLSNIY W + A L
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHL 530
Query: 540 RSLIKENRLKKVLGQSMV 557
R + EN + K+ G+S +
Sbjct: 531 RDKMNENGITKICGRSWI 548
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 191/405 (47%), Gaps = 28/405 (6%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
ARPD +T + +K C ++ VG +HG + + D D+ VG++ ++ Y KC ++ A
Sbjct: 106 ARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSAR 165
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVT--LVSAASA-- 120
+VF E P+ + V WT++V Y +SG E A + F M S + + LV +
Sbjct: 166 KVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVN 225
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
+L D R I + S+++ Y K G + SA LF E DV +W
Sbjct: 226 AKKLFDEMPKRDIISY-------------TSMIDGYAKGGDMVSARDLFEEARGVDVRAW 272
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI----HQ 236
S+++ YA NG A +F+EM K ++P+ +V + AC+ E K+ HQ
Sbjct: 273 SALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ 332
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
+ V AL+DM KC + A +F +P++D+V++ + G A G +
Sbjct: 333 RMNKFS---SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK--SGFDNNEYIGASL 354
++ +F M+ +G+ PD VA IL + ++++ + + K S + ++ + +
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY-SCI 448
Query: 355 IEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEA 398
+ + ++ + A ++ + M ++ W S++ HG E A
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 286/538 (53%), Gaps = 17/538 (3%)
Query: 30 MIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSG 89
+IHG ++ + LI+LY K G++ A ++F K DVV WT++++ + R G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
AL F M E+V + T S +C L K G IHG V++ +L +
Sbjct: 93 YHPDALLLFKEMH-REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
++LL+LY + G ++ A + F M ++D++SW++M+ Y N A + LF M+ + +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
P+ T S LRA LE ++H LA+ GF + + +L++ Y+KC S NA +
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 270 FNRIPKKDVVAWAVLFGGYA-ETGMAHKSMEVFCNMLSDGVRPDAV---ALVKILTAISE 325
K+D+++ L G++ + + ++F +M+ + D V +++KI T I+
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 326 LGVLQQAVCLHAFVTKSG---FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIW 382
+ + +Q +H F KS FD +G SLI+MYAK I++A F M KDV W
Sbjct: 332 VTIGRQ---IHGFALKSSQIRFD--VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 386
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+S+IA YG HG E+A+ L+ +M H +KPN VTF+S+LSACSH G E G I+D M+
Sbjct: 387 TSLIAGYGRHGNFEKAIDLYNRM-EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI 445
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP--MQAGPHVWGALLGACHIHHNIK 500
NK+ + EH ++D+L R G L+ A +I + + WGA L AC H N++
Sbjct: 446 NKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQ 505
Query: 501 MGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN-RLKKVLGQSMV 557
+ +VAA L ++P Y L+++Y + W NA R L+KE+ K G S+V
Sbjct: 506 LSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 16/452 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+ + T LKSC L L+ G IHG ++K N G++ V SAL+ LY++CG+M +A
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
F + D+V W +++ GY + + + + F M + E PD T S A +
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM-LTEGKKPDCFTFGSLLRASIVVK 228
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++ +HG + G +L SL+N Y K GS+ +A L +D++S ++++
Sbjct: 229 CLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT 288
Query: 186 CYA-DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SYGF 243
++ N ++A D+F +MI + + + V + S L+ C + + + GR+IH A+ S
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ + +L+DMY K E+AV F + +KDV +W L GY G K+++++
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR 408
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLH-AFVTKSGFDNNEYIGASLIEMYAKCS 362
M + ++P+ V + +L+A S G + ++ + K G + E + +I+M A+
Sbjct: 409 MEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSG 468
Query: 363 SIDNANKVFR---GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
++ A + R G+ W + + A HG + + Q+ + KP V +I
Sbjct: 469 YLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP--VNYI 526
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
++ S + G +D +N +LM +S
Sbjct: 527 NLASVYAANG-------AWDNALNTRKLMKES 551
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 196/433 (45%), Gaps = 17/433 (3%)
Query: 101 MAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG 160
+ V E P + A C+ + K IHG G ++L L + L++LY K G
Sbjct: 2 LVVSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQG 61
Query: 161 SIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
+K A LF + +DV+SW++M++ ++ G +AL LF EM + ++ N T S L+
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
+C L+EG +IH V +AL+ +Y +C E A F+ + ++D+V+
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W + GY A S +F ML++G +PD +L A + L+ LH
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG---EE 397
K GF + + SL+ Y KC S+ NA K+ G +D++ +++I GF Q +
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT--GFSQQNNCTSD 299
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
A +F M K ++V S+L C+ V G I + Q+ D +
Sbjct: 300 AFDIFKDMIRMKT-KMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 458 VDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF------P 511
+D+ + GE++ A+ M + W +L+ H N + A +L+
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFE----KAIDLYNRMEHER 413
Query: 512 LDPNHAGYYTLLS 524
+ PN + +LLS
Sbjct: 414 IKPNDVTFLSLLS 426
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 266/511 (52%), Gaps = 41/511 (8%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS--AEILFR 170
+L+S C L+ K IHG V R GLD + L+ K G A +
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 171 EMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
+ ++ W++++ YA G A+ ++ M + I P T + L+AC + L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 231 GRKIH-QLAVSYGFELETTVSTALMDMYLKCSS-----------PEN------------- 265
GR+ H Q GF V ++DMY+KC S PE
Sbjct: 168 GRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 266 -------AVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVK 318
A ++F +P KD+VAW + G+A+ +++E F M G+R D V +
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 319 ILTAISELGVLQQAVCLHAFVTKSGFDNNEY--IGASLIEMYAKCSSIDNANKVFRGMAY 376
++A ++LG + A KSG+ +++ IG++LI+MY+KC +++ A VF M
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 377 KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGIT 436
K+V +SS+I HG+ +EAL LF+ M +++KPN VTF+ L ACSH+GLV++G
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 437 IFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH 496
+FD M + + P +HY MVDLLGR G L AL++I M ++ VWGALLGAC IH
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 497 HNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSM 556
+N ++ E+AA++LF L+P+ G Y LLSN+Y +W ++R LIKE LKK S
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 557 VELKN-EVHSFVASDRFHDESDQIFEVLRKL 586
V KN ++H F + H S++I + L +L
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEEL 557
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 42/421 (9%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND--AVEVFMEYPKP 73
L C+ L ++ + IHG + ++ LD ++ + LI +K G D A V
Sbjct: 56 LDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI 133
+ LWT+++ GY G + A+A + M EE++P T + AC + D LGR
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY------ 187
H R + + N+++++Y K SI A +F EMP++DVISW+ ++A Y
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 188 -------------------------ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
A N AL+ F+ M I + VT+ + AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 223 ASASYLEEGRKIHQLAVSYGFELE--TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
A + + Q+A G+ + +AL+DMY KC + E AV++F + K+V
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQA-VCLHAF 338
++ + G A G A +++ +F M++ ++P+ V V L A S G++ Q +
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD-VVIWSSIIAAYGFHGQGEE 397
G ++++ + + A ++ + M+ + +W +++ A H E
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 398 A 398
A
Sbjct: 472 A 472
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 41/319 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHG--------------------FLKKENLD----- 41
P S T S LK+C ++ L +GR H ++K E++D
Sbjct: 147 PVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKV 206
Query: 42 ------GDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELAL 95
D+ + LI Y++ G M A E+F P D+V WT++VTG+ ++ P+ AL
Sbjct: 207 FDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDT--HLSLANSLL 153
+F RM + D VT+ SACAQL SK ++ G H+ + ++L+
Sbjct: 267 EYFDRMEK-SGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALI 325
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNW 212
++Y K G+++ A +F M +K+V ++SSM+ A +G A AL LF+ M+ + I+PN
Sbjct: 326 DMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 213 VTLVSALRACASASYLEEGRKIH-QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFN 271
VT V AL AC+ + +++GR++ + ++G + T ++D+ + + A+++
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Query: 272 RI---PKKDVVAWAVLFGG 287
+ P V W L G
Sbjct: 446 TMSVEPHGGV--WGALLGA 462
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 295/558 (52%), Gaps = 12/558 (2%)
Query: 16 LKSCVGLQK-LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
+K+C Q+ +G +H K D D V ++LI +Y+K +VF E D
Sbjct: 53 IKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRD 112
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL-SDSKLGRSI 133
V + SI+ + G A+ M + P + S + C ++ S SK+ R
Sbjct: 113 TVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI-PKSELVASLLALCTRMGSSSKVARMF 171
Query: 134 HGFV---KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
H V +R + + L+ +L+++Y K +A +F +M K+ +SW++M++ N
Sbjct: 172 HALVLVDER--MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVAN 229
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE-GRKIHQLAVSYGFELETTV 249
+DLF M + + PN VTL+S L AC +Y ++IH + +G + +
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERL 289
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+ A M MY +C + + +F +DVV W+ + GYAETG + M + M +G+
Sbjct: 290 TAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI 349
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
++V L+ I++A + +L A +H+ + K GF ++ +G +LI+MYAKC S+ A +
Sbjct: 350 EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAARE 409
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
VF + KD+V WSS+I AYG HG G EAL++F M + + + F++ILSAC+HAG
Sbjct: 410 VFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH-EVDDMAFLAILSACNHAG 468
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGAL 489
LVEE TIF KY + EHY ++LLGR G++D A ++ NMPM+ +W +L
Sbjct: 469 LVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSL 527
Query: 490 LGACHIHHNIKM-GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRL 548
L AC H + + G++ A L +P++ Y LLS I+ N+H A ++R +++ +L
Sbjct: 528 LSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKL 587
Query: 549 KKVLGQSMVELKNEVHSF 566
K G S +E + ++ +
Sbjct: 588 NKCYGFSKIEPELQIEDY 605
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 202/399 (50%), Gaps = 5/399 (1%)
Query: 7 PDSHTVSIALKSCVGL-QKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAV 64
P S V+ L C + +V RM H L E + + + +AL+++Y K + A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
VF + + V WT++++G + E+ + F M E + P+ VTL+S AC +L
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ-RENLRPNRVTLLSVLPACVEL 264
Query: 125 S-DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ S L + IHGF R G L + + +Y + G++ + +LF +DV+ WSSM
Sbjct: 265 NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ YA+ G + ++L N+M + IE N VTL++ + AC +++ L +H + GF
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ AL+DMY KC S A ++F + +KD+V+W+ + Y G +++E+F
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M+ G D +A + IL+A + G++++A + K A I + +
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK 504
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKL 401
ID+A +V M K IWSS+++A HG+ + A K+
Sbjct: 505 IDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/623 (27%), Positives = 308/623 (49%), Gaps = 46/623 (7%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF-- 67
H+ + L +CV ++ G +H ++ + L+ YS N+A +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 68 --MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+ +P P W ++ Y ++ E +A + RM V + + PD T S AC +
Sbjct: 104 SDILHPLP----WNVLIASYAKNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETL 158
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D GR +HG ++ + L + N+L+++Y + ++ A LF M ++D +SW++++
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVT------------------------------- 214
CYA G + A +LF++M +E + +T
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSL 278
Query: 215 ----LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
++ L+AC+ + G++IH LA+ ++ V L+ MY KC +A+ +F
Sbjct: 279 DPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF 338
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
+ + + W + GYA+ + ++ + ML G +P+++ L IL + + LQ
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 331 QAVCLHAFVTKSG-FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
H ++ + F + + SL+++YAK I A +V M+ +D V ++S+I Y
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY 458
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
G G+G AL LF +M S +KP+ VT +++LSACSH+ LV EG +F M +Y + P
Sbjct: 459 GNQGEGGVALALFKEM-TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRP 517
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
+H+ MVDL GR G L +A DII+NMP + W LL ACHIH N ++G+ AA+ L
Sbjct: 518 CLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKL 577
Query: 510 FPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVAS 569
+ P + GYY L++N+Y +W A++R+++++ +KK G + ++ + F
Sbjct: 578 LEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVG 637
Query: 570 DRFHDESDQIFEVLRKLDVKMRE 592
D E+ + +L L+ M++
Sbjct: 638 DTSSPEACNTYPLLDGLNQLMKD 660
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 188/428 (43%), Gaps = 37/428 (8%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD+ T LK+C + GR++HG ++ + ++V +ALI +Y + M A
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM-----------------AVLEE-- 106
+F + D V W +++ Y G A F +M L+
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 107 ---------------VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANS 151
S DPV ++ AC+ + +LG+ IHG D ++ N+
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 152 LLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPN 211
L+ +Y K ++ A I+FR+ + + +W+S+++ YA + A L EM+ +PN
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 212 WVTLVSALRACASASYLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKCSSPENAVDIF 270
+TL S L CA + L+ G++ H + F+ T + +L+D+Y K A +
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
+ + K+D V + L GY G ++ +F M G++PD V +V +L+A S ++
Sbjct: 441 DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVH 500
Query: 331 QAVCLH-AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV-VIWSSIIAA 388
+ L + G + ++++Y + + A + M YK W++++ A
Sbjct: 501 EGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Query: 389 YGFHGQGE 396
HG +
Sbjct: 561 CHIHGNTQ 568
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 166/406 (40%), Gaps = 39/406 (9%)
Query: 110 DPVTLVSAAS---ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAE 166
D + L SAAS AC + G +H G++ H L L+ Y A+
Sbjct: 39 DDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQ 98
Query: 167 ILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASAS 226
+ + W+ ++A YA N + + M+ K I P+ T S L+AC
Sbjct: 99 SIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETL 158
Query: 227 YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFG 286
+ GR +H ++ V AL+ MY + + A +F+R+ ++D V+W +
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRP----------------------------------- 311
YA GM ++ E+F M GV
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSL 278
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
D VA++ L A S +G ++ +H S +D + + +LI MY+KC + +A VF
Sbjct: 279 DPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF 338
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
R + W+SII+ Y + EEA L +M + +PN +T SIL C+ +
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV-AGFQPNSITLASILPLCARIANL 397
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ G ++ + + + +VD+ + G++ A + + M
Sbjct: 398 QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 318/645 (49%), Gaps = 73/645 (11%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ V K+C L+ GR +HG++ K L+ +FV S+L ++Y KCG ++DA +V
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P + V W +++ GY ++G E A+ FS M + V P VT+ + SA A +
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK-QGVEPTRVTVSTCLSASANMGG 289
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ G+ H G++ L SLLN Y K G I+ AE++F M +KDV++W+ +++
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y G +A+ + M ++++ + VTL + + A A L+ G+++ + + FE +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM-------- 298
+++ +MDMY KC S +A +F+ +KD++ W L YAE+G++ +++
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 299 ---------------------------EVFCNMLSDGVRPDAVALVKILTAISELGVLQQ 331
++F M S G+ P+ ++ ++ + + G ++
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 332 AVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK----VFRGMAYKDVV-IWSSII 386
A+ + +SG N + + A +S+ + R + + +V I +S++
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 387 AAYGFHGQGEEALKLF------------------------------YQMANHSDLKPNKV 416
Y G +A K+F Y+ LKP+ +
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINN 476
T ++LSAC+HAG + + I IF +V+K + P EHYG+MVDLL GE ++AL +I
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 477 MPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNA 536
MP + + +L+ +C+ ++ + ++ L +P ++G Y +SN Y V+ +W
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 537 AKLRSLIKENRLKKVLGQSMVELKNE--VHSFVASDRFHDESDQI 579
K+R ++K LKK G S +++ E VH FVA+D+ H ++I
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 254/467 (54%), Gaps = 11/467 (2%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIE-----LYSKCGEMNDAVEVFMEY 70
L+ CV + L G+ IH + K +GD + + IE Y+KC + A +F +
Sbjct: 77 LQGCVYERDLSTGKQIHARILK---NGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKL 133
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
+V W +I+ R G E AL F M + E+ PD + + AC L S+ G
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEM-LENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
R +HG+V + GL+ + +A+SL ++YGK G + A +F E+PD++ ++W++++ Y N
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
G A+ LF++M + +EP VT+ + L A A+ +EEG++ H +A+ G EL+ +
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
T+L++ Y K E A +F+R+ +KDVV W ++ GY + G+ ++ + M + ++
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
D V L +++A + L+ + + + F+++ + +++++MYAKC SI +A KV
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 371 FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
F KD+++W++++AAY G EAL+LFY M + PN +T+ I+ + G
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQ 491
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
V+E +F + + ++P+ + M++ + + G + A+ + M
Sbjct: 492 VDEAKDMF-LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVG--SALIELYSKCGEMNDA 63
RP++ ++++AL +C L L +GR IHG++ + NL V ++L+++Y+KCG++N A
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSIETSLVDMYAKCGDINKA 601
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+VF ++ L ++++ Y G + A+A + + + + PD +T+ + SAC
Sbjct: 602 EKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV-GLKPDNITITNVLSACNH 660
Query: 124 LSDSKLGRSIHGF---VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
D + ++I F V + + L +++L G + A L EMP K
Sbjct: 661 AGD--INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 282/562 (50%), Gaps = 30/562 (5%)
Query: 59 EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA 118
+++A EVF + P P V L+T ++TGY RS AL F M V + VS + +++S
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWN--SMISGC 107
Query: 119 SACA------QLSDSKLGRSI-------HGFVKRCGLDTHLSL-----------ANSLLN 154
C +L D RS+ +G + +D L NS+++
Sbjct: 108 VECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVH 167
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
Y + G + A LF++MP K+VISW++M+ N + ALDLF M+ I+
Sbjct: 168 GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+ ACA+A G ++H L + GF E VS +L+ Y C ++ +F+
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
+ V W L GY+ ++ +F ML + + P+ L + S LG L
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+H K G + + ++G SL+ MY+ ++++A VF + K +V W+SII HG+
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS-EH 453
G+ A +F QM + +P+++TF +LSACSH G +E+G +F M + + +H
Sbjct: 408 GKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQH 466
Query: 454 YGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLD 513
Y MVD+LGR G+L A ++I M ++ VW ALL AC +H ++ GE AA +F LD
Sbjct: 467 YTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLD 526
Query: 514 PNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFH 573
+ Y LLSNIY W N +KLR +K+N + K G S V ++ + H F + D+ H
Sbjct: 527 SKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
Query: 574 DESDQIFEVLRKLDVKMREECY 595
+I+E L L K++E Y
Sbjct: 587 --CSRIYEKLEFLREKLKELGY 606
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 184/374 (49%), Gaps = 9/374 (2%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM- 101
D ++++ Y + G+++DA+++F + P +V+ WT+++ G +++ AL F M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 102 AVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS 161
+ + P T V +ACA +G +HG + + G ++ SL+ Y
Sbjct: 218 RCCIKSTSRPFTCV--ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 162 IKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
I + +F E + V W+++L+ Y+ N +AL +F+ M+ I PN T S L +
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
C++ L+ G+++H +AV G E + V +L+ MY + +AV +F +I KK +V+W
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
+ G A+ G + +F M+ PD + +L+A S G L++ L +++
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 342 --SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHG---QG 395
+ D ++++ +C + A ++ M K + ++W ++++A H +G
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 396 EEALKLFYQMANHS 409
E+A + + + S
Sbjct: 516 EKAAAAIFNLDSKS 529
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ +T+RP + + +C +G +HG + K + +V ++LI Y+ C +
Sbjct: 221 IKSTSRP----FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
D+ +VF E V +WT++++GY + E AL+ FS M + + P+ T S ++
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNS 335
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
C+ L G+ +HG + GL+T + NSL+ +Y +G++ A +F ++ K ++SW
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+S++ A +G A +F +MI EP+ +T L AC+ +LE+GRK+ S
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 241 YGFELETTVS--TALMDMYLKCSSPENAVDIFNR-IPKKDVVAWAVLF 285
++ + T ++D+ +C + A ++ R + K + + W L
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 49/290 (16%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T + L SC L L+ G+ +HG K L+ D FVG++L+ +YS G +NDAV V
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F++ K +V W SI+ G + G + A F +M L + PD +T SAC+
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGF 442
Query: 127 SKLGRSIHGFVKRC--GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
+ GR + ++ +D + ++++ G+ G +K AE L M K
Sbjct: 443 LEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKP-------- 494
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
NEM+ W+ L+S AC S ++ G K A + F
Sbjct: 495 ----------------NEMV-------WLALLS---ACRMHSDVDRGEK----AAAAIFN 524
Query: 245 LETTVSTA---LMDMYLKCSSPENAVDIF-----NRIPKKDVVAWAVLFG 286
L++ S A L ++Y N + N I KK +W V+ G
Sbjct: 525 LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
S+ +E L+ +L + A ++FN++P V + + GY + ++
Sbjct: 28 SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 300 VF-----------CNMLSDGVR-PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
+F +M+S V D VK+ + E V+ ++ D
Sbjct: 88 LFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQA 147
Query: 348 EYI-----------GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGE 396
E + S++ Y + +D+A K+F+ M K+V+ W+++I + +
Sbjct: 148 ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
EAL LF M +K F +++AC++A GI + +++
Sbjct: 208 EALDLFKNMLRCC-IKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 294/578 (50%), Gaps = 68/578 (11%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
D + + ++ ++K GE++ A +F P+ DVV S++ GY +G E AL F +
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL- 181
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
S D +TL + ACA+L K G+ IH + G++ + +SL+N+Y K G +
Sbjct: 182 ---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 163 KSAEILFREMPDKD-------------------------------VISWSSMLACYADNG 191
+ A + ++ + D VI W+SM++ Y N
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
AL LFNEM ++ E + TL + + AC +LE G+++H A +G + V++
Sbjct: 299 MKMEALVLFNEMRNETREDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 252 ALMDMYLKCSSP-------------------------------ENAVDIFNRIPKKDVVA 280
L+DMY KC SP ++A +F RI K +++
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W + G+++ G +++E F M + D V+L +++A + + L+ + A T
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
G D+++ + +SLI++Y KC +++ +VF M D V W+S+I+ Y +GQG EA+
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
LF +M+ + ++P ++TF+ +L+AC++ GLVEEG +F+ M + +PD EH+ MVDL
Sbjct: 538 LFKKMS-VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDL 596
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYY 520
L R G ++ A++++ MP +W ++L C + MG+ AA+ + L+P ++ Y
Sbjct: 597 LARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAY 656
Query: 521 TLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVE 558
LS I+ +W ++A +R L++EN + K G S +
Sbjct: 657 VQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 232/502 (46%), Gaps = 76/502 (15%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D+ T++ LK+C L+ L+ G+ IH + ++ D + S+L+ +Y+KCG++ A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 68 MEYPKPD-------------------------------VVLWTSIVTGYERSGTPELALA 96
+ +PD V+LW S+++GY + AL
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F+ M E D TL + +AC L + G+ +H + GL + +A++LL++Y
Sbjct: 306 LFNEMR--NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 157 GKTGS-------------------------------IKSAEILFREMPDKDVISWSSMLA 185
K GS I A+ +F + +K +ISW+SM
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
++ NG L+ F++M + + V+L S + ACAS S LE G ++ A G +
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ VS++L+D+Y KC E+ +F+ + K D V W + GYA G +++++F M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCL-HAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
G+RP + + +LTA + G++++ L + GF ++ + ++++ A+ +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 365 DNANKVFRGMAYK-DVVIWSSII---AAYGFHGQGEEALKLFYQMANHSDLKP-NKVTFI 419
+ A + M + D +WSSI+ A G+ G++A + + L+P N V ++
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE------LEPENSVAYV 657
Query: 420 SILSACSHAGLVEEGITIFDIM 441
+ + + +G E + +M
Sbjct: 658 QLSAIFATSGDWESSALVRKLM 679
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 37/335 (11%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M R DS T++ + +C+GL LE G+ +H K L D+ V S L+++YSKCG
Sbjct: 310 MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSP 369
Query: 61 NDAVEVFMEYPKPDVVL-------------------------------WTSIVTGYERSG 89
+A ++F E D +L W S+ G+ ++G
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
L +F +M L ++ D V+L S SACA +S +LG + GLD+ ++
Sbjct: 430 CTVETLEYFHQMHKL-DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS 488
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
+SL++LY K G ++ +F M D + W+SM++ YA NG A+DLF +M I
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQ-LAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
P +T + L AC +EEGRK+ + + V +GF + + ++D+ + E A++
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 269 IFNRIP-KKDVVAWAVLFGGYAETG---MAHKSME 299
+ +P D W+ + G G M K+ E
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAE 643
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 181/441 (41%), Gaps = 124/441 (28%)
Query: 120 ACAQLSDSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
+C+ + L R +G + + G L + + +AN LL +Y ++G + A LF EMPD++
Sbjct: 35 SCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYF 94
Query: 179 SWSSMLACYADNGAATNALDLFNEM----------------------IDKRI-----EPN 211
SW++M+ Y ++G +L F+ M + +R+ E +
Sbjct: 95 SWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKD 154
Query: 212 WVTLVSALRACASASYLEE--------------------------------GRKIHQLAV 239
VTL S L Y EE G++IH +
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQIL 214
Query: 240 SYGFELETTVSTALMDMYLKCS-------------SPEN------------------AVD 268
G E ++ ++++L+++Y KC P++ +
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F+R + V+ W + GY M +++ +F N + + R D+ L ++ A LG
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLF-NEMRNETREDSRTLAAVINACIGLGF 333
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS------------------------- 363
L+ +H K G ++ + ++L++MY+KC S
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 364 ------IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
ID+A +VF + K ++ W+S+ + +G E L+ F+QM + DL ++V+
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM-HKLDLPTDEVS 452
Query: 418 FISILSACSHAGLVEEGITIF 438
S++SAC+ +E G +F
Sbjct: 453 LSSVISACASISSLELGEQVF 473
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/567 (30%), Positives = 293/567 (51%), Gaps = 37/567 (6%)
Query: 13 SIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELY------------------ 54
S LK+C + +++G +++ + KENL GD+ + ++++++Y
Sbjct: 111 SAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR 170
Query: 55 -------------SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM 101
K G M++AV +F P+P+VV W +++G+ G+P AL F RM
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRM 229
Query: 102 AVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS 161
E + D L AC+ +G+ +H V + GL++ ++L+++Y GS
Sbjct: 230 Q-REGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 162 -IKSAEILFRE--MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
I +A++ +E + V W+SML+ + N AL L ++ + + TL A
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
L+ C + L G ++H L V G+EL+ V + L+D++ + ++A +F+R+P KD+
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAF 338
+A++ L G ++G + +F ++ G+ D + IL S L L +H
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEA 398
K G+++ +L++MY KC IDN +F GM +DVV W+ II +G +G+ EEA
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 399 LKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
+ F++M N ++PNKVTF+ +LSAC H+GL+EE + + M ++Y L P EHY +V
Sbjct: 529 FRYFHKMINIG-IEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV 587
Query: 459 DLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAG 518
DLLG+ G A ++IN MP++ +W +LL AC H N + V A+ L P+
Sbjct: 588 DLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPS 647
Query: 519 YYTLLSNIYCVDKNWHNAAKLRSLIKE 545
YT LSN Y W +K+R K+
Sbjct: 648 VYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 200/390 (51%), Gaps = 6/390 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D + LK+C L +G+ +H + K L+ F SALI++YS CG + A +VF
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 68 MEYP---KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+ V +W S+++G+ + E AL ++ ++ D TL A C
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQI-YQSDLCFDSYTLSGALKICINY 355
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
+ +LG +H V G + + + L++L+ G+I+ A LF +P+KD+I++S ++
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLI 415
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
+G + A LF E+I ++ + + + L+ C+S + L G++IH L + G+E
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYE 475
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
E +TAL+DMY+KC +N V +F+ + ++DVV+W + G+ + G ++ F M
Sbjct: 476 SEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQA-VCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
++ G+ P+ V + +L+A G+L++A L ++ G + ++++ +
Sbjct: 536 INIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGL 595
Query: 364 IDNANKVFRGMAYK-DVVIWSSIIAAYGFH 392
AN++ M + D IW+S++ A G H
Sbjct: 596 FQEANELINKMPLEPDKTIWTSLLTACGTH 625
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 224/505 (44%), Gaps = 39/505 (7%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D ++ L+ C +Q + G I + K+ + ++F+ + +I +Y ++DA +VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E + ++V WT++V+GY G P A+ + RM EE + + + AC + D
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAE--------------------- 166
+LG ++ + + L + L NS++++Y K G + A
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 167 ----------ILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
LF MP +V+SW+ +++ + D G+ AL+ M + + + L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALP 242
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR---I 273
L+AC+ L G+++H V G E +AL+DMY C S A D+F++
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
V W + G+ ++ + + + D+ L L L+ +
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
+H+ V SG++ + +G+ L++++A +I +A+K+F + KD++ +S +I G
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNK-YQLMPDSE 452
A LF ++ L ++ +IL CS + G I + + K Y+ P +
Sbjct: 423 FNSLAFYLFRELIKLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA 481
Query: 453 HYGIMVDLLGRMGELDRALDIINNM 477
+VD+ + GE+D + + + M
Sbjct: 482 T--ALVDMYVKCGEIDNGVVLFDGM 504
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 219/369 (59%)
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
G IH + + GF V +L+ +Y C +A +F+++P+KD+VAW + G+AE
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
G +++ ++ M S G++PD +V +L+A +++G L +H ++ K G N +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
L+++YA+C ++ A +F M K+ V W+S+I +G G+EA++LF M +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 411 LKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
L P ++TF+ IL ACSH G+V+EG F M +Y++ P EH+G MVDLL R G++ +A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 471 LDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVD 530
+ I +MPMQ +W LLGAC +H + + E A + L+PNH+G Y LLSN+Y +
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 531 KNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKM 590
+ W + K+R + + +KKV G S+VE+ N VH F+ D+ H +SD I+ L+++ ++
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 591 REECYEHQL 599
R E Y Q+
Sbjct: 367 RSEGYVPQI 375
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 31/305 (10%)
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
++D +LG +IH V R G + + + NSLL+LY G + SA +F +MP+KD+++W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ +A+NG AL L+ EM K I+P+ T+VS L ACA L G+++H + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
S L+D+Y +C E A +F+ + K+ V+W L G A G +++E+F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 304 MLS-DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD-------------NNEY 349
M S +G+ P + V IL A C H + K GF+ E+
Sbjct: 181 MESTEGLLPCEITFVGILYA-----------CSHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEA----LKLFYQ 404
G ++++ A+ + A + + M + +VVIW +++ A HG + A +++
Sbjct: 230 FGC-MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 288
Query: 405 MANHS 409
NHS
Sbjct: 289 EPNHS 293
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 4/266 (1%)
Query: 25 LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTG 84
+ +G IH + + ++V ++L+ LY+ CG++ A +VF + P+ D+V W S++ G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 85 YERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDT 144
+ +G PE ALA ++ M + + PD T+VS SACA++ LG+ +H ++ + GL
Sbjct: 64 FAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 145 HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
+L +N LL+LY + G ++ A+ LF EM DK+ +SW+S++ A NG A++LF M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 205 DKR-IEPNWVTLVSALRACASASYLEEG-RKIHQLAVSYGFELETTVSTALMDMYLKCSS 262
+ P +T V L AC+ ++EG ++ Y E ++D+ +
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 263 PENAVDIFNRIP-KKDVVAWAVLFGG 287
+ A + +P + +VV W L G
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGA 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T+ L +C + L +G+ +H ++ K L ++ + L++LY++CG + +A
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F E + V WTS++ G +G + A+ F M E + P +T V AC+
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 126 DSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
K G + ++ + +++L + G +K A + MP +V+ W ++
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPN 211
L +G + L F + ++EPN
Sbjct: 266 LGACTVHGDSD--LAEFARIQILQLEPN 291
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 276/466 (59%), Gaps = 2/466 (0%)
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G +HG+V + GL +AN+L+N Y K+ + F + P K +WSS+++C+A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
N +L+ +M+ + P+ L SA ++CA S + GR +H L++ G++ + V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
++L+DMY KC A +F+ +P+++VV W+ + GYA+ G +++ +F L + +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
+ + +++ + +L+ +H KS FD++ ++G+SL+ +Y+KC + A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
VF + K++ IW++++ AY H ++ ++LF +M S +KPN +TF+++L+ACSHAG
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAG 332
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGAL 489
LV+EG FD M + ++ P +HY +VD+LGR G L AL++I NMP+ VWGAL
Sbjct: 333 LVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 490 LGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLK 549
L +C +H N ++ AA +F L P +G + LSN Y D + +AAK R L+++ K
Sbjct: 392 LTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEK 451
Query: 550 KVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
K G S VE +N+VH+F A +R H++S +I+E L +L +M + Y
Sbjct: 452 KETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGY 497
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 190/372 (51%), Gaps = 2/372 (0%)
Query: 28 GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
G +HG++ K L V + LI YSK D+ F + P+ W+SI++ + +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS 147
+ P ++L F +M + + PD L SA +CA LS +GRS+H + G D +
Sbjct: 94 NELPWMSLEFLKKM-MAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
+ +SL+++Y K G I A +F EMP ++V++WS M+ YA G AL LF E + +
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+ N + S + CA+++ LE GR+IH L++ F+ + V ++L+ +Y KC PE A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+FN +P K++ W + YA+ K +E+F M G++P+ + + +L A S G
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV-VIWSSII 386
++ + + +S + + ASL++M + + A +V M +W +++
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 387 AAYGFHGQGEEA 398
+ H E A
Sbjct: 393 TSCTVHKNTELA 404
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 159/300 (53%), Gaps = 4/300 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M RPD H + A KSC L + ++GR +H K D D+FVGS+L+++Y+KCGE+
Sbjct: 108 MAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEI 167
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A ++F E P+ +VV W+ ++ GY + G E AL F + A+ E ++ + + S S
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF-KEALFENLAVNDYSFSSVISV 226
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA + +LGR IHG + D+ + +SL++LY K G + A +F E+P K++ W
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++ML YA + ++LF M ++PN++T ++ L AC+ A ++EGR
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
E +L+DM + + A+++ +P + ++G + HK+ E+
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP---IDPTESVWGALLTSCTVHKNTEL 403
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N+ + L + A +G ++H V G L V+ L++ Y K P ++ F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
P+K W+ + +A+ + S+E M++ +RPD L + + L
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYG 390
+H K+G+D + ++G+SL++MYAKC I A K+F M ++VV WS ++ Y
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
G+ EEAL LF + A +L N +F S++S C+++ L+E G I + +
Sbjct: 194 QMGENEEALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS-S 251
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH-HNIKMGEVAAK-N 508
S +V L + G + A + N +P++ +W A+L A H H K+ E+ +
Sbjct: 252 SFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRMK 310
Query: 509 LFPLDPNHAGYYTLLS 524
L + PN + +L+
Sbjct: 311 LSGMKPNFITFLNVLN 326
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 285/560 (50%), Gaps = 42/560 (7%)
Query: 11 TVSIALKSCVGLQKL---EVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
++S + C L ++ E+G+ IH + GD+ + ++L+E+Y+K +MN A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E P+ +VV W ++ G+ + + ++ F +RM P+ VT +S AC + D
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD-SGFQPNEVTCISVLGACFRSGDV 366
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+ GR I F +P V +W++ML+ Y
Sbjct: 367 ETGRRI-----------------------------------FSSIPQPSVSAWNAMLSGY 391
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
++ A+ F +M + ++P+ TL L +CA +LE G++IH + + +
Sbjct: 392 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 248 TVSTALMDMYLKCSSPENAVDIFNR-IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
+ + L+ +Y +C E + IF+ I + D+ W + G+ + K++ +F M
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 307 DGVR-PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
V P+ + +L++ S L L H V KSG+ ++ ++ +L +MY KC ID
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
+A + F + K+ VIW+ +I YG +G+G+EA+ L+ +M + + KP+ +TF+S+L+AC
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTAC 630
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV 485
SH+GLVE G+ I M + + P+ +HY +VD LGR G L+ A + P ++ +
Sbjct: 631 SHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVL 690
Query: 486 WGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
W LL +C +H ++ + A+ L LDP + Y LLSN Y + W ++A L+ L+ +
Sbjct: 691 WEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNK 750
Query: 546 NRLKKVLGQSMVELKNEVHS 565
NR+ K GQS N++ S
Sbjct: 751 NRVHKTPGQSWTTYGNDLDS 770
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 230/495 (46%), Gaps = 49/495 (9%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND-AVE 65
P T++ L +C + G HG K LD ++FVG+AL+ +Y+KCG + D V
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS------ 119
VF +P+ V +T+++ G R A+ F R+ + V D V L + S
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMF-RLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 120 ACAQLSD---SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD 176
C LS+ ++LG+ IH R G L L NSLL +Y K + AE++F EMP+ +
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
V+SW+ M+ + + +++ M D +PN VT +S L AC + +E GR+
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR--- 371
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
IF+ IP+ V AW + GY+ +
Sbjct: 372 --------------------------------IFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++ F M ++PD L IL++ + L L+ +H V ++ N +I + LI
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 357 MYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
+Y++C ++ + +F + D+ W+S+I+ + + +AL LF +M + L PN+
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 416 VTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIIN 475
+F ++LS+CS + G F +V K + DS + D+ + GE+D A +
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 476 NMPMQAGPHVWGALL 490
+ ++ +W ++
Sbjct: 579 AV-LRKNTVIWNEMI 592
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 244/546 (44%), Gaps = 90/546 (16%)
Query: 28 GRMIHGFLKKENLDGDMFVGSALIELYSKC------------------------------ 57
G++IHGF+ + + D ++ + L++LY +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 58 -GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVS 116
G++ +A EVF P+ DVV W ++++ R G E AL + RM V + P TL S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM-VCDGFLPSRFTLAS 143
Query: 117 AASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI-LFREMPDK 175
SAC+++ D G HG + GLD ++ + N+LL++Y K G I + +F +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL-----VSALR-ACASASYL- 228
+ +S+++++ A A+ +F M +K ++ + V L +SA R C S S +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 229 --EEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFG 286
E G++IH LA+ GF + ++ +L+++Y K A IF +P+ +VV+W ++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
G+ + + KS+E M G +P+ V + +L A G
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG------------------- 364
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA 406
++ ++F + V W+++++ Y + EEA+ F QM
Sbjct: 365 ----------------DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM- 407
Query: 407 NHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
+LKP+K T ILS+C+ +E G I +++ + ++ +S ++ + +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI-RTEISKNSHIVSGLIAVYSECEK 466
Query: 467 LDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFP-------LDPNHAGY 519
++ + I ++ + W +++ HN M + A LF L PN +
Sbjct: 467 MEISECIFDDCINELDIACWNSMISG--FRHN--MLDTKALILFRRMHQTAVLCPNETSF 522
Query: 520 YTLLSN 525
T+LS+
Sbjct: 523 ATVLSS 528
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T+S+ L SC L+ LE G+ IHG + + + + + S LI +YS+C +M +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 66 VFME-YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
+F + + D+ W S+++G+ + AL F RM + P+ + + S+C++L
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
GR HG V + G + + +L ++Y K G I SA F + K+ + W+ M+
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI-HQLAVSYGF 243
Y NG A+ L+ +MI +P+ +T VS L AC+ + +E G +I + +G
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
E E ++D + E+A + P K V W +L
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILL 695
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE---------- 264
L S LR G+ IH V G + +T + L+D+Y++C +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 265 ---------------------NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
A ++F+ +P++DVV+W + G K++ V+
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 304 MLSDGVRPDAVALVKILTAISEL--GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M+ DG P L +L+A S++ GV H K+G D N ++G +L+ MYAKC
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRC--HGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 362 SSI-DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
I D +VF ++ + V ++++I + EA+++F M ++ + V +
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG-VQVDSVCLSN 245
Query: 421 ILS 423
ILS
Sbjct: 246 ILS 248
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/578 (30%), Positives = 295/578 (51%), Gaps = 47/578 (8%)
Query: 28 GRMIH-GFLKKENLDGDMFVGSA-----LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSI 81
GR+I G +K NL + + A + +++C V F D LW ++
Sbjct: 33 GRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAV 92
Query: 82 VTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCG 141
+ + P AL M VS D +L AC++L K G IHGF+K+ G
Sbjct: 93 IKSHSHGKDPRQALLLLCLMLE-NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTG 151
Query: 142 LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFN 201
L + L L N L+ LY K G + + +F MP +D +S++SM+ Y G +A +LF+
Sbjct: 152 LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFD 211
Query: 202 EM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC 260
M ++ + +W +++S + +G I + E + +++D Y+K
Sbjct: 212 LMPMEMKNLISWNSMISGYAQTS------DGVDIASKLFADMPEKDLISWNSMIDGYVKH 265
Query: 261 SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH------------------------- 295
E+A +F+ +P++DVV WA + GYA+ G H
Sbjct: 266 GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 325
Query: 296 ------KSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+++E+F +M + + PD LV +L AI++LG L +A+ +H ++ + F
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 385
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+G +LI+MY+KC SI +A VF G+ K + W+++I HG GE A + Q+
Sbjct: 386 KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Query: 409 SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD 468
S LKP+ +TF+ +L+ACSH+GLV+EG+ F++M K+++ P +HYG MVD+L R G ++
Sbjct: 446 S-LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 469 RALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYC 528
A ++I MP++ +W L AC H + GE+ AK+L + Y LLSN+Y
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Query: 529 VDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
W + ++R+++KE +++K+ G S +EL VH F
Sbjct: 565 SFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 210/448 (46%), Gaps = 34/448 (7%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D ++S+ LK+C L ++ G IHGFLKK L D+F+ + LI LY KCG + + ++F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD- 126
PK D V + S++ GY + G A F M + + + ++ S S AQ SD
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK---NLISWNSMISGYAQTSDG 236
Query: 127 ----SKL------------GRSIHGFVKRCGLDTHLSLAN-----------SLLNLYGKT 159
SKL I G+VK ++ L + ++++ Y K
Sbjct: 237 VDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL 296
Query: 160 GSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEM-IDKRIEPNWVTLVSA 218
G + A+ LF +MP +DV++++SM+A Y N AL++F++M + + P+ TLV
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
L A A L + +H V F L + AL+DMY KC S ++A+ +F I K +
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA-VCLHA 337
W + GG A G+ + ++ + ++PD + V +L A S G++++ +C
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 338 FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGE 396
K + ++++ ++ SI+ A + M + + VIW + + A H + E
Sbjct: 477 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFE 536
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSA 424
+ + + P+ +S + A
Sbjct: 537 TGELVAKHLILQAGYNPSSYVLLSNMYA 564
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T+ I L + L +L +H ++ ++ +G ALI++YSKCG + A+ V
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + W +++ G G E A ++ L + PD +T V +AC+
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL-SLKPDDITFVGVLNACSHSGL 466
Query: 127 SKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP--DKDVISWSSM 183
K G ++R ++ L ++++ ++GSI+ A+ L EMP DVI + +
Sbjct: 467 VKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL 526
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA-------CASASYLEEGRKIHQ 236
AC T L + ++ P+ L+S + A + + RKI +
Sbjct: 527 TACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEK 586
Query: 237 LAVSYGFELETTVSTALMD 255
+ EL+ V +D
Sbjct: 587 IPGCSWIELDGRVHEFFVD 605
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 280/547 (51%), Gaps = 51/547 (9%)
Query: 17 KSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVV 76
K+ L+++ +++G + ++ G++ ++L S G + A ++F E PKPDV
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASL----SVPGALKYAHKLFDEIPKPDVS 78
Query: 77 LWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF 136
+ ++ G +S PE ++ ++ M VSPD T AC++L G + HG
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEK-RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 137 VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNA 196
V R G + + N+L+ + G + A LF + ++WSSM + YA G A
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
+ LF+EM K + W +++
Sbjct: 198 MRLFDEMPYKD-QVAWNVMITGC------------------------------------- 219
Query: 257 YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL 316
LKC ++A ++F+R +KDVV W + GY G +++ +F M G PD V +
Sbjct: 220 -LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI 278
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSG-FDNNEYIGA----SLIEMYAKCSSIDNANKVF 371
+ +L+A + LG L+ LH ++ ++ ++ Y+G +LI+MYAKC SID A +VF
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
RG+ +D+ W+++I H E ++++F +M + PN+VTFI ++ ACSH+G V
Sbjct: 339 RGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEM-QRLKVWPNEVTFIGVILACSHSGRV 396
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLG 491
+EG F +M + Y + P+ +HYG MVD+LGR G+L+ A + +M ++ VW LLG
Sbjct: 397 DEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLG 456
Query: 492 ACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKV 551
AC I+ N+++G+ A + L + + +G Y LLSNIY W K+R + + R+KK
Sbjct: 457 ACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKP 516
Query: 552 LGQSMVE 558
G S++E
Sbjct: 517 TGVSLIE 523
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 186/433 (42%), Gaps = 80/433 (18%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T + LK+C L+ G HG + + + +V +ALI ++ CG++ A E+
Sbjct: 110 PDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASEL 169
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + K V W+S+ +GY + G + A+ F M ++V+ + +++ C ++
Sbjct: 170 FDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWN--VMITGCLKCKEMD- 226
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
SA LF +KDV++W++M++
Sbjct: 227 -------------------------------------SARELFDRFTEKDVVTWNAMISG 249
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH-----QLAVSY 241
Y + G AL +F EM D P+ VT++S L ACA LE G+++H +VS
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
+ T + AL+DMY KC S + A+++F + +D+ W L G A A S+E+F
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMF 368
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M V P+ V + ++ A S G + D + + +MY
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRV---------------DEGRKYFSLMRDMYNIE 413
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
+I + + ++ G GQ EEA M ++PN + + ++
Sbjct: 414 PNIKH---------------YGCMVDMLGRAGQLEEAFMFVESMK----IEPNAIVWRTL 454
Query: 422 LSACSHAGLVEEG 434
L AC G VE G
Sbjct: 455 LGACKIYGNVELG 467
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLDGDMFVGS----ALIELYSKC 57
A PD T+ L +C L LE G+ +H + L+ ++ ++VG+ ALI++Y+KC
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
G ++ A+EVF D+ W +++ G E ++ F M L +V P+ VT +
Sbjct: 329 GSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRL-KVWPNEVTFIGV 386
Query: 118 ASACAQLSDSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DK 175
AC+ GR ++ ++ ++ ++++ G+ G ++ A + M +
Sbjct: 387 ILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEP 446
Query: 176 DVISWSSML-AC 186
+ I W ++L AC
Sbjct: 447 NAIVWRTLLGAC 458
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 300/572 (52%), Gaps = 27/572 (4%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
++ + + LI +Y+KCG + A +VF P+ +VV WT+++TGY ++G + FS M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM- 153
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKT--- 159
L P+ TL S ++C + G+ +HG + GL + +AN+++++YG+
Sbjct: 154 -LSHCFPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 160 GSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL 219
+ A +F + K++++W+SM+A + A+ +F M + + TL++
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 220 RACASASYLEEGR------KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ +S L ++H L V G +T V+TAL+ +Y + E+ D +
Sbjct: 269 SSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLF 326
Query: 274 PK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
+ +D+VAW + +A +++ +F + + + PD +L A + L
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
+ A+ +HA V K GF + + SLI YAKC S+D +VF M +DVV W+S++ AY
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
HGQ + L +F +M D+ P+ TFI++LSACSHAG VEEG+ IF M K + +P
Sbjct: 446 SLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
HY ++D+L R A ++I MPM VW ALLG+C H N ++G++AA L
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 510 FPL-DPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
L +P ++ Y +SNIY + +++ A ++ R++K S E+ N+VH F +
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS 621
Query: 569 SDRFHDESDQIFEVLRKLDVKMREECYEHQLK 600
R + + ++ L++L ++E Y +++
Sbjct: 622 GGRHRPDKEAVYRELKRLISWLKEMGYVPEMR 653
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 30/404 (7%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE- 65
P+ T+S L SC + E G+ +HG K L ++V +A+I +Y +C + A E
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 66 --VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
VF ++V W S++ ++ + A+ F RM + V D TL++ S+ +
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHS-DGVGFDRATLLNICSSLYK 273
Query: 124 LSD------SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKT-GSIKSAEILFREMPD-K 175
SD SK +H + GL T +A +L+ +Y + LF EM +
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
D+++W+ ++ +A A+ LF ++ +++ P+W T S L+ACA IH
Sbjct: 334 DIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH 295
+ GF +T ++ +L+ Y KC S + + +F+ + +DVV+W + Y+ G
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 296 KSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG---- 351
+ VF M + PD+ + +L+A S G +++ + + +S F+ E +
Sbjct: 453 SILPVFQKM---DINPDSATFIALLSACSHAGRVEEGL----RIFRSMFEKPETLPQLNH 505
Query: 352 -ASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAAYGFHG 393
A +I+M ++ A +V + M D V+W +++ + HG
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 219 LRACASASYLEEGRKIHQ--LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
+ACA L +G +H L+ Y + ++ L++MY KC + A +F+ +P++
Sbjct: 66 FQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPER 125
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
+VV+W L GY + G + +F +MLS P+ L +LT+ + +H
Sbjct: 126 NVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGKQVH 180
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKC---SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
K G + Y+ ++I MY +C ++ A VF + +K++V W+S+IAA+
Sbjct: 181 GLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCN 240
Query: 394 QGEEALKLFYQMANHSD-LKPNKVTFISILSA 424
G++A+ +F +M HSD + ++ T ++I S+
Sbjct: 241 LGKKAIGVFMRM--HSDGVGFDRATLLNICSS 270
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T S LK+C GL IH + K D + ++LI Y+KCG ++ + V
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + DVV W S++ Y G + L F +M +++PD T ++ SAC+
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAGR 482
Query: 127 SKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSML 184
+ G R ++ L+ ++++ + AE + ++MP D D + W ++L
Sbjct: 483 VEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPN 211
+G T L + + + +EP
Sbjct: 543 GSCRKHG-NTRLGKLAADKLKELVEPT 568
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 291/570 (51%), Gaps = 37/570 (6%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP 109
LI K G++ +A ++F P+ DVV WT ++TGY + G A F R+ + V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 110 DPVTLVSAASACAQLSDSKL-------------GRSIHGFVKRCGLDTHLSL-------- 148
+VS QLS +++ I G+ + +D L L
Sbjct: 112 -WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 149 ---ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMID 205
NS++ + G I A LF MP +DV+SW++M+ A NG A LF+ M +
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN 265
+ I +W +++ A + ++E ++ Q+ F T+ T +++
Sbjct: 231 RNI-ISWNAMITGY---AQNNRIDEADQLFQVMPERDFASWNTMITG----FIRNREMNK 282
Query: 266 AVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAIS 324
A +F+R+P+K+V++W + GY E +++ VF ML DG V+P+ V IL+A S
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG--MAYKDVVIW 382
+L L + +H ++KS NE + ++L+ MY+K + A K+F + +D++ W
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+S+IA Y HG G+EA++++ QM H KP+ VT++++L ACSHAGLVE+G+ F +V
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHG-FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMG 502
L EHY +VDL GR G L + IN + +GA+L AC++H+ + +
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 503 EVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNE 562
+ K + + AG Y L+SNIY + AA++R +KE LKK G S V++ +
Sbjct: 522 KEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQ 581
Query: 563 VHSFVASDRFHDESDQIFEVLRKLDVKMRE 592
H FV D+ H + + + +L L KMR+
Sbjct: 582 NHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 170/340 (50%), Gaps = 36/340 (10%)
Query: 30 MIHGFLKKENL-----------DGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLW 78
M+ G+L+ + L + ++ + +I+ Y++ G ++ A+E+F E P+ ++V W
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSW 174
Query: 79 TSIVTGYERSGTPELALAFFSRMAVLEEVS----PDPVTLVSAASACAQLSDSKLGRSI- 133
S+V + G + A+ F RM + VS D + +L D R+I
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 134 --HGFVKRCGLDTHLSLANSLLNLYGK----------TGSIKSAEI-----LFREMPDKD 176
+ + + + A+ L + + TG I++ E+ LF MP+K+
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 177 VISWSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIH 235
VISW++M+ Y +N AL++F++M+ D ++PN T VS L AC+ + L EG++IH
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR--IPKKDVVAWAVLFGGYAETGM 293
QL + V++AL++MY K A +F+ + ++D+++W + YA G
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 294 AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
+++E++ M G +P AV + +L A S G++++ +
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+ +P+ T L +C L L G+ IH + K + V SAL+ +YSK GE+
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 63 AVEVFME--YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A ++F + D++ W S++ Y G + A+ +++M P VT ++ A
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK-HGFKPSAVTYLNLLFA 443
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANS----LLNLYGKTGSIK 163
C+ + G F K D L L L++L G+ G +K
Sbjct: 444 CSHAGLVEKGME---FFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 292/589 (49%), Gaps = 45/589 (7%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T LKSC L + GR++H + K D+F +AL+ +Y K ++ DA++V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
E P+ + + V+G +G A F VS + V+ AS D
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD----ARVSGSGMNSVTVASVLGGCGD 144
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
+ G +H + G + + + SL+++Y + G A +F ++P K V+++++ ++
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 187 YADNGAATNALDLFNEMID-KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+NG +FN M EPN VT V+A+ ACAS L+ GR++H L + F+
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 246 ETTVSTALMDMYLKC--------------------------------SSPENAVDIFNRI 273
ET V TAL+DMY KC E AV++F ++
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 274 P----KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
K D W L G+++ G ++ + F MLS + P L +L+A S++ L
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTL 384
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM--AYKDVVIWSSIIA 387
+ +H V K+ + + ++ SLI+MY KC A ++F KD V W+ +I+
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
YG HG+ E A+++F ++ ++P+ TF ++LSACSH G VE+G IF +M +Y
Sbjct: 445 GYGKHGECESAIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P +EH G M+DLLGR G L A ++I+ M + +LLG+C H + +GE AA
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSM 556
L L+P + + +LS+IY + W + +R +I + +L K+ G S+
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 12/341 (3%)
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
SP+ T +CA+L D GR +H V + G + A +L+++Y K + A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP---NWVTLVSALRACAS 224
+ EMP++ + S ++ ++ +NG +A +F D R+ N VT+ S L C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFG---DARVSGSGMNSVTVASVLGGCGD 144
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
+E G ++H LA+ GFE+E V T+L+ MY +C A +F ++P K VV +
Sbjct: 145 ---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 285 FGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
G E G+ + VF M P+ V V +TA + L LQ LH V K
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGMA-YKDVVIWSSIIAAYGFHGQGEEALKLF 402
F +G +LI+MY+KC +A VF + ++++ W+S+I+ +GQ E A++LF
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
++ + LKP+ T+ S++S S G V E F+ M++
Sbjct: 322 EKL-DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 40/310 (12%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKC----- 57
++ P+ T A+ +C L L+ GR +HG + K+ + VG+ALI++YSKC
Sbjct: 225 SSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKS 284
Query: 58 ---------------------------GEMNDAVEVF----MEYPKPDVVLWTSIVTGYE 86
G+ AVE+F E KPD W S+++G+
Sbjct: 285 AYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFS 344
Query: 87 RSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHL 146
+ G A FF RM + V P L S SAC+ + K G+ IHG V + + +
Sbjct: 345 QLGKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 147 SLANSLLNLYGKTGSIKSAEILFR--EMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
+ SL+++Y K G A +F E KD + W+ M++ Y +G +A+++F +
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLR 463
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV-SYGFELETTVSTALMDMYLKCSSP 263
++++EP+ T + L AC+ +E+G +I +L YG++ T ++D+ +
Sbjct: 464 EEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRL 523
Query: 264 ENAVDIFNRI 273
A ++ +++
Sbjct: 524 REAKEVIDQM 533
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 12/470 (2%)
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+H + G + N L+ Y K I +A LF EM + +V+SW+S+++ Y D G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 193 ATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
NAL +F +M + R + PN T S +AC++ + G+ IH G VS+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 252 ALMDMYLKCSSPENAVDIFNRIPK--KDVVAWAVLFGGYAETGMAHKSMEVF----CNML 305
+L+DMY KC+ E A +F+ + ++VV+W + YA+ H+++E+F +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
SD R + L +++A S LG LQ H VT+ G+++N + SL++MYAKC S+
Sbjct: 231 SD--RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 366 NANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSAC 425
A K+F + V+ ++S+I A HG GE A+KLF +M + PN VT + +L AC
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA-GRINPNYVTLLGVLHAC 347
Query: 426 SHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA--GP 483
SH+GLV EG+ +M KY ++PDS HY +VD+LGR G +D A ++ + + A G
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+WGALL A +H +++ A+K L + Y LSN Y V W ++ LR +
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
K + K S +E K+ V+ F A D DES +I L+ L+ +M+E
Sbjct: 468 KRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKER 517
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 207/390 (53%), Gaps = 19/390 (4%)
Query: 30 MIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSG 89
++H K D F + L+ Y K E+N A ++F E +P+VV WTS+++GY G
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 90 TPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
P+ AL+ F +M V P+ T S AC+ L++S++G++IH ++ GL ++ ++
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 150 NSLLNLYGKTGSIKSAEILFREMP--DKDVISWSSMLACYADNGAATNALDLFNE----M 203
+SL+++YGK +++A +F M ++V+SW+SM+ YA N A++LF +
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
R N L S + AC+S L+ G+ H L G+E T V+T+L+DMY KC S
Sbjct: 230 TSDR--ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
A IF RI V+++ + A+ G+ ++++F M++ + P+ V L+ +L A
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 324 SELGVLQQAV-CLHAFVTKSGF--DNNEYIGASLIEMYAKCSSIDNANKVFRGM---AYK 377
S G++ + + L K G D+ Y +++M + +D A ++ + + A +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHY--TCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 378 DVVIWSSIIAAYGFHGQGE---EALKLFYQ 404
++W ++++A HG+ E EA K Q
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQ 435
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 7/299 (2%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ +T + K+C L + +G+ IH L+ L ++ V S+L+++Y KC ++ A V
Sbjct: 129 PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 67 F---MEYPKPDVVLWTSIVTGYERSGTPELALAFF-SRMAVLEEVSPDPVTLVSAASACA 122
F + Y + +VV WTS++T Y ++ A+ F S A L + L S SAC+
Sbjct: 189 FDSMIGYGR-NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
L + G+ HG V R G +++ +A SLL++Y K GS+ AE +F + VIS++S
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTS 307
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSY 241
M+ A +G A+ LF+EM+ RI PN+VTL+ L AC+ + + EG + + +A Y
Sbjct: 308 MIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKY 367
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
G ++ T ++DM + + A ++ I + A+L+G G H +E+
Sbjct: 368 GVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI-EVGAEQGALLWGALLSAGRLHGRVEI 425
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R + ++ + +C L +L+ G++ HG + + + + V ++L+++Y+KCG ++ A +
Sbjct: 233 RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEK 292
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+F+ V+ +TS++ + G E A+ F M V ++P+ VTL+ AC+
Sbjct: 293 IFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSH 349
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 263/470 (55%), Gaps = 37/470 (7%)
Query: 160 GSIKSAEILFREMPDKDVISWSSM---LACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
G ++ A +F P + ++M L+ + A + A+ ++ ++ +P+ T
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
L+ S + GR+IH V +GF+ V T L+ MY C +A +F+ + K
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 277 DV---------------------------------VAWAVLFGGYAETGMAHKSMEVFCN 303
DV V+W + GYA++G A +++EVF
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
ML + V PD V L+ +L+A ++LG L+ + ++V G + + ++I+MYAK +
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
I A VF + ++VV W++IIA HG G EAL +F +M + ++PN VTFI+ILS
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVK-AGVRPNDVTFIAILS 359
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
ACSH G V+ G +F+ M +KY + P+ EHYG M+DLLGR G+L A ++I +MP +A
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA 419
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+WG+LL A ++HH++++GE A L L+PN++G Y LL+N+Y W + +R+++
Sbjct: 420 AIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMM 479
Query: 544 KENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREE 593
K +KK+ G+S +E++N V+ F++ D H + ++I E+L+++D++++ +
Sbjct: 480 KGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQSK 529
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 44/419 (10%)
Query: 23 QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIV 82
L+ + H ++ L+ D + IE S G + A VF P P+ L +++
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 83 TGYERSGTPE---LALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKR 139
P +A+ + ++ L PD T ++SD GR IHG V
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALC-AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 140 CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV---------------------- 177
G D+ + + L+ +Y G + A +F EM KDV
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 178 -----------ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASAS 226
+SW+ +++ YA +G A+ A+++F M+ + +EP+ VTL++ L ACA
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 227 YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFG 286
LE G +I G +++ A++DMY K + A+D+F + +++VV W +
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL-HAFVTKSGFD 345
G A G +++ +F M+ GVRP+ V + IL+A S +G + L ++ +K G
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 346 NN-EYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEAL 399
N E+ G +I++ + + A++V + M +K + IW S++AA H GE AL
Sbjct: 385 PNIEHYGC-MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 38/340 (11%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
A+PD+ T LK V + + GR IHG + D + V + LI++Y CG + DA
Sbjct: 112 AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDAR 171
Query: 65 EVFMEYPKPDV---------------------------------VLWTSIVTGYERSGTP 91
++F E DV V WT +++GY +SG
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRA 231
Query: 92 ELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANS 151
A+ F RM ++E V PD VTL++ SACA L +LG I +V G++ +SL N+
Sbjct: 232 SEAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 152 LLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPN 211
++++Y K+G+I A +F + +++V++W++++A A +G AL +FN M+ + PN
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 212 WVTLVSALRACASASYLEEGRKI-HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
VT ++ L AC+ +++ G+++ + + YG ++D+ + A ++
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
+P K A A ++G H +E+ LS+ ++
Sbjct: 411 KSMPFK---ANAAIWGSLLAASNVHHDLELGERALSELIK 447
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 251/478 (52%), Gaps = 35/478 (7%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
N++++ Y K+G + A ++F MP++DV+SW++M+ YA +G AL + E I+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
N + L AC + L+ R+ H + GF +S +++D Y KC E+A
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 270 FNRI-------------------------------PKKDVVAWAVLFGGYAETGMAHKSM 298
F+ + P+K+ V+W L GY G ++++
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
++F M++ GV+P+ L A + + L+ +H ++ ++ N + +SLI+MY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 359 AKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
+K S++ + +VFR K D V W+++I+A HG G +AL++ M ++PN+ T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR-VQPNRTT 415
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ IL+ACSH+GLVEEG+ F+ M ++ ++PD EHY ++DLLGR G + I M
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAA 537
P + H+W A+LG C IH N ++G+ AA L LDP + Y LLS+IY W
Sbjct: 476 PFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVE 535
Query: 538 KLRSLIKENRLKKVLGQSMVELKNEVHSFVASD--RFHDESDQIFEVLRKLDVKMREE 593
KLR ++K+ R+ K S +E++ +V +F SD H ++I+ +L L + EE
Sbjct: 536 KLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEE 593
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 67/447 (14%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
L+ C + L+ G+ IH LK + + + LI +Y KCG+ DA +VF + +
Sbjct: 53 LQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRN 112
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA---------------- 118
+ W ++V+GY +SG A F M + VS + + + A
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 119 --------------SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
+AC + +L R HG V G +++ L+ S+++ Y K G ++S
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 165 -------------------------------AEILFREMPDKDVISWSSMLACYADNGAA 193
AE LF EMP+K+ +SW++++A Y G+
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
ALDLF +MI ++P T S L A AS + L G++IH + V ++L
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 254 MDMYLKCSSPENAVDIFNRI--PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
+DMY K S E + +F RI K D V W + A+ G+ HK++ + +M+ V+P
Sbjct: 353 IDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 312 DAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
+ LV IL A S G++++ + + + G ++ A LI++ + +
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 371 FRGMAYK-DVVIWSSIIAAYGFHGQGE 396
M ++ D IW++I+ HG E
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEE 498
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 168/410 (40%), Gaps = 71/410 (17%)
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
S L+ +A + A+ + + I + L S L+ C L++G+ IH+
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 242 GFELETTV-STALMDMYLKCSSPENAVDIFNR---------------------------- 272
GF+ T+ S L+ MY+KC P +A +F++
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 273 ---IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
+P++DVV+W + GYA+ G H+++ + G++ + + +LTA + L
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
Q H V +GF +N + S+I+ YAKC +++A + F M KD+ IW+++I+ Y
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 390 GFHGQGEEALKLFYQMANHSD------------------------------LKPNKVTFI 419
G E A KLF +M + +KP + TF
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
S L A + + G I M+ + + P++ ++D+ + G L+ + +
Sbjct: 316 SCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 480 QAGPHVWGALLGACHIHHNIKMGEVAAKNL-----FPLDPNHAGYYTLLS 524
+ W ++ A H +G A + L F + PN +L+
Sbjct: 375 KHDCVFWNTMISALAQH---GLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ T S L + + L G+ IHG++ + N+ + V S+LI++YSK G + +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 66 VF-MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
VF + K D V W ++++ + G AL M V P+ TLV +AC+
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF-RVQPNRTTLVVILNACSHS 426
Query: 125 SDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSS 182
+ G R + G+ L++L G+ G K EMP + D W++
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNA 486
Query: 183 MLA 185
+L
Sbjct: 487 ILG 489
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 252/444 (56%), Gaps = 2/444 (0%)
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
G S+ A +FR + D +++M+ Y + + AL +NEM+ + EP+ T
Sbjct: 77 GWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYP 136
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
L+AC + EG++IH G E + V +L++MY +C E + +F ++ K
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVLQQAVCL 335
+W+ + A GM + + +F M S+ ++ + +V L A + G L + +
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG 395
H F+ ++ + N + SL++MY KC +D A +F+ M ++ + +S++I+ HG+G
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYG 455
E AL++F +M L+P+ V ++S+L+ACSH+GLV+EG +F M+ + ++ P +EHYG
Sbjct: 317 ESALRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 456 IMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPN 515
+VDLLGR G L+ AL+ I ++P++ +W L C + NI++G++AA+ L L +
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 516 HAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDE 575
+ G Y L+SN+Y + W + A+ R+ I LK+ G S+VELK + H FV+ DR H +
Sbjct: 436 NPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPK 495
Query: 576 SDQIFEVLRKLDVKMREECYEHQL 599
+I+++L +++ +++ E Y L
Sbjct: 496 CKEIYKMLHQMEWQLKFEGYSPDL 519
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 169/332 (50%), Gaps = 6/332 (1%)
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
MN A +F P + +++ GY + E AL F++ M + PD T
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEM-MQRGNEPDNFTYPCLLK 140
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
AC +L + G+ IHG V + GL+ + + NSL+N+YG+ G ++ + +F ++ K S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 180 WSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
WSSM++ A G + L LF M + ++ +VSAL ACA+ L G IH
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ EL V T+L+DMY+KC + A+ IF ++ K++ + ++ + G A G ++
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF--DNNEYIGASLIE 356
+F M+ +G+ PD V V +L A S G++++ + A + K G E+ G L++
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC-LVD 379
Query: 357 MYAKCSSIDNANKVFRGMAY-KDVVIWSSIIA 387
+ + ++ A + + + K+ VIW + ++
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 151/288 (52%), Gaps = 4/288 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M PD+ T LK+C L+ + G+ IHG + K L+ D+FV ++LI +Y +CGEM
Sbjct: 124 MQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEM 183
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ VF + W+S+V+ G L F M + + +VSA A
Sbjct: 184 ELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLA 243
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA LG SIHGF+ R + ++ + SL+++Y K G + A +F++M ++ +++
Sbjct: 244 CANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTY 303
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
S+M++ A +G +AL +F++MI + +EP+ V VS L AC+ + ++EGR++ +
Sbjct: 304 SAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Query: 241 YGFELETTVS--TALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
G ++E T L+D+ + E A++ IP +K+ V W
Sbjct: 364 EG-KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 241/462 (52%), Gaps = 33/462 (7%)
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLF 200
GL + +++ K + A LF ++ + +V ++S++ Y N + + ++
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIY 96
Query: 201 NEMIDKRIE-PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLK 259
+++ K E P+ T ++CAS G+++H +G AL+DMY+K
Sbjct: 97 KQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 260 CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS---------------------- 297
+A +F+ + ++DV++W L GYA G K+
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 298 ---------MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
M+ F M G+ PD ++L+ +L + ++LG L+ +H + + GF
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+ +LIEMY+KC I A ++F M KDV+ WS++I+ Y +HG A++ F +M
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM-QR 335
Query: 409 SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD 468
+ +KPN +TF+ +LSACSH G+ +EG+ FD+M YQ+ P EHYG ++D+L R G+L+
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE 395
Query: 469 RALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYC 528
RA++I MPM+ +WG+LL +C N+ + VA +L L+P G Y LL+NIY
Sbjct: 396 RAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYA 455
Query: 529 VDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD 570
W + ++LR +I+ +KK G S++E+ N V FV+ D
Sbjct: 456 DLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGD 497
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 43/412 (10%)
Query: 23 QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIV 82
+K+ +IHG L F+ + +++ K +M+ A +F + P+V L+ SI+
Sbjct: 27 KKINASIIIHG------LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 83 TGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL 142
Y + + + ++ PD T +CA L LG+ +HG + + G
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 143 DTHLSLANSLLNLY-------------------------------GKTGSIKSAEILFRE 171
H+ N+L+++Y + G +K A+ LF
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
M DK ++SW++M++ Y G A+D F EM IEP+ ++L+S L +CA LE G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 232 RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAET 291
+ IH A GF +T V AL++MY KC A+ +F ++ KDV++W+ + GYA
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAF-VTKSGFDNNEYI 350
G AH ++E F M V+P+ + + +L+A S +G+ Q+ L F + + + I
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG--LRYFDMMRQDYQIEPKI 378
Query: 351 G--ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEAL 399
LI++ A+ ++ A ++ + M K D IW S++++ G + AL
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 150/319 (47%), Gaps = 34/319 (10%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T KSC L +G+ +HG L K + +ALI++Y K ++ DA +V
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPEL-------------------------------AL 95
F E + DV+ W S+++GY R G + A+
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL 155
FF M L + PD ++L+S +CAQL +LG+ IH + +R G + N+L+ +
Sbjct: 227 DFFREMQ-LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
Y K G I A LF +M KDVISWS+M++ YA +G A A++ FNEM +++PN +T
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 216 VSALRACASASYLEEG-RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+ L AC+ +EG R + Y E + L+D+ + E AV+I +P
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Query: 275 -KKDVVAWAVLFGGYAETG 292
K D W L G
Sbjct: 406 MKPDSKIWGSLLSSCRTPG 424
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A PD ++ L SC L LE+G+ IH + ++ V +ALIE+YSKCG ++
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A+++F + DV+ W+++++GY G A+ F+ M +V P+ +T + SAC+
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACS 353
Query: 123 QLSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISW 180
+ + G R + ++ + L+++ + G ++ A + + MP K D W
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEP 210
S+L+ G AL + +++ +EP
Sbjct: 414 GSLLSSCRTPGNLDVALVAMDHLVE--LEP 441
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 125/302 (41%), Gaps = 37/302 (12%)
Query: 230 EGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
E +KI+ + +G + + T ++D K + A +FN++ +V + + Y
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 290 ETGMAHKSMEVFCNMLSDGVR-PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+ + ++ +L PD + + + LG +H + K G +
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+LI+MY K + +A+KVF M +DV+ W+S+++ Y GQ ++A LF+ M +
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 409 S------------------------------DLKPNKVTFISILSACSHAGLVEEGITIF 438
+ ++P++++ IS+L +C+ G +E G I
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWI- 263
Query: 439 DIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV--WGALLGACHIH 496
+ + + + ++++ + G + +A+ + M G V W ++ H
Sbjct: 264 HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM---EGKDVISWSTMISGYAYH 320
Query: 497 HN 498
N
Sbjct: 321 GN 322
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 244/476 (51%), Gaps = 3/476 (0%)
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
A S K + IH V R G SL LL G + A +F EM + W+
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
++ Y N +L L+ +M D + P+ T ++A + G +H V Y
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
GF V+T L+ MY+K +A +F + KD+VAW +TG + ++E F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M +D V+ D+ +V +L+A +LG L+ ++ K D N + + ++M+ KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
+ + A +F M ++VV WS++I Y +G EAL LF M N L+PN VTF+ +
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGV 317
Query: 422 LSACSHAGLVEEGITIFDIMV--NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
LSACSHAGLV EG F +MV N L P EHY MVDLLGR G L+ A + I MP+
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 480 QAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
+ +WGALLGAC +H ++ +G+ A L P+ Y+ LLSNIY W K+
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 540 RSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
RS +++ KKV S VE + ++H F D+ H +S I+E L ++ K+R+ Y
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 184/368 (50%), Gaps = 5/368 (1%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERS 88
+ IH + + + + L+E G+M A +VF E KP + LW ++ GY R+
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 89 GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSL 148
P +L + +M L V PD T A +QL D G ++H V + G +
Sbjct: 88 QLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
A L+ +Y K G + SAE LF M KD+++W++ LA G + AL+ FN+M +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+ + T+VS L AC LE G +I+ A + V A +DM+LKC + E A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F + +++VV+W+ + GYA G + +++ +F M ++G+RP+ V + +L+A S G+
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 329 LQQAVCLHAFVTKSGFDNNEYIG---ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSS 384
+ + + + +S N E A ++++ + ++ A + + M + D IW +
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 385 IIAAYGFH 392
++ A H
Sbjct: 387 LLGACAVH 394
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 5/288 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD T +K+ L G +H + K V + L+ +Y K GE++ A
Sbjct: 106 RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEF 165
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F D+V W + + ++G +AL +F++M + V D T+VS SAC QL
Sbjct: 166 LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA-DAVQFDSFTVVSMLSACGQLG 224
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++G I+ ++ +D ++ + N+ L+++ K G+ ++A +LF EM ++V+SWS+M+
Sbjct: 225 SLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIV 284
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS---YG 242
YA NG + AL LF M ++ + PN+VT + L AC+ A + EG++ L V
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN 344
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYA 289
E ++D+ + E A + ++P + D W L G A
Sbjct: 345 LEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 286/559 (51%), Gaps = 17/559 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + L+SC +EV R IHG++ K LD D F S L+ +S ++ A +
Sbjct: 26 PQCQKLINDLRSC--RDTVEVSR-IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSI 81
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F ++ ++ +++ GY S PE A + F+++ + ++ D + ++ +C++
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRA-KGLTLDRFSFITTLKSCSRELC 140
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSMLA 185
+G +HG R G L N+L++ Y G I A +F EMP D +++S+++
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
Y ALDLF M + N TL+S L A + L H L + G +L
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ + TAL+ MY K +A IF+ +KDVV W + YA+TG+ + + + M
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 306 SDGVRPDAVALVKILT--AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+ ++P++ V +L+ A SE + + V + + + +G +L++MYAK
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA--DLLEEERIALDAILGTALVDMYAKVGL 378
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS-DLKPNKVTFISIL 422
++ A ++F M KDV W+++I+ YG HG EA+ LF +M + ++PN++TF+ +L
Sbjct: 379 LEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVL 438
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
+ACSH GLV EGI F MV Y P EHYG +VDLLGR G+L+ A ++I N+P+ +
Sbjct: 439 NACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSD 498
Query: 483 PHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSL 542
W ALL AC ++ N +GE L + H LL+ + V N +SL
Sbjct: 499 STAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE-----KSL 553
Query: 543 IKE-NRLKKVLGQSMVELK 560
E N+ +K G S +E++
Sbjct: 554 DNELNKGRKEAGYSAIEIE 572
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+S T L SC + VGR + L++E + D +G+AL+++Y+K G + AVE
Sbjct: 325 KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVE 384
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE---VSPDPVTLVSAASACA 122
+F DV WT++++GY G A+ F++M EE V P+ +T + +AC+
Sbjct: 385 IFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKME--EENCKVRPNEITFLVVLNACS 442
Query: 123 QLSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
G R V+ + +++L G+ G ++ A L R +P D +W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 181 SSMLA 185
++LA
Sbjct: 503 RALLA 507
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 288/562 (51%), Gaps = 45/562 (8%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P ++++ ++ + LA F + + + PD TL + +L G
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRG-QGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+HG+ + GL+ ++NSL+ +Y G I+ +F EMP +DV+SW+ +++ Y NG
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 193 ATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
+A+ +F M + ++ + T+VS L AC++ LE G +I++ V+ FE+ +
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGN 186
Query: 252 ALMDMYLKCSSPENAVDIFN-------------------------------RIPKKDVVA 280
AL+DM+ KC + A +F+ R P KDVV
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W + GY + +++E+F M + G+RPD LV +LT ++ G L+Q +H ++
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
++ ++ +G +L++MYAKC I+ A +VF + +D W+S+I +G AL
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALD 366
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
L+Y+M N ++ + +TF+++L+AC+H G V EG IF M ++ + P SEH ++DL
Sbjct: 367 LYYEMEN-VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 461 LGRMGELDRALDIINNMPMQAGPH---VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHA 517
L R G LD A ++I+ M ++ V+ +LL A + N+K+ E A+ L ++ + +
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 518 GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRF--HDE 575
+TLL+++Y W + +R +K+ ++K G S +E+ H F+ D H +
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 576 SDQIFEVLRK-----LDVKMRE 592
D+I +L + LD++ +E
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKE 567
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 208/423 (49%), Gaps = 35/423 (8%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T+ + LKS L+K+ G +HG+ K L+ D +V ++L+ +Y+ G++ +V
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P+ DVV W +++ Y +G E A+ F RM+ + D T+VS SAC+ L +
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN 163
Query: 127 SKLGRSIHGFVK------------------RCGL------------DTHLSLANSLLNLY 156
++G I+ FV +CG D ++ S++ Y
Sbjct: 164 LEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
TG I A +LF P KDV+ W++M+ Y AL+LF M I P+ LV
Sbjct: 224 VSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLV 283
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
S L CA LE+G+ IH ++ V TAL+DMY KC E A+++F I ++
Sbjct: 284 SLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV-CL 335
D +W L G A GM+ ++++++ M + GVR DA+ V +LTA + G + +
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIF 403
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF---RGMAYKDVV-IWSSIIAAYGF 391
H+ + + LI++ + +D A ++ RG + + +V ++ S+++A
Sbjct: 404 HSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARN 463
Query: 392 HGQ 394
+G
Sbjct: 464 YGN 466
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A RPD+ + L C LE G+ IHG++ + + D VG+AL+++Y+KCG +
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A+EVF E + D WTS++ G +G AL + M + V D +T V+ +AC
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV-GVRLDAITFVAVLTACN 391
Query: 123 QLSDSKLGRSI-HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM 172
GR I H +R + + L++L + G + AE L +M
Sbjct: 392 HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 213/339 (62%), Gaps = 3/339 (0%)
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GV 309
TA++ Y + NAV +F +P++DV +W + + G+ +++ +F M+++ +
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
RP+ V +V +L+A ++ G LQ A +HAF + ++ ++ SL+++Y KC +++ A+
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA--NHSDLKPNKVTFISILSACSH 427
VF+ + K + W+S+I + HG+ EEA+ +F +M N +D+KP+ +TFI +L+AC+H
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 428 AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWG 487
GLV +G FD+M N++ + P EHYG ++DLLGR G D AL++++ M M+A +WG
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 488 ALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENR 547
+LL AC IH ++ + EVA KNL L+PN+ GY +++N+Y NW A + R +IK
Sbjct: 437 SLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 548 LKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKL 586
K G S +E+ NEVH F + D+ H E+++I+ +L L
Sbjct: 497 AYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 199/440 (45%), Gaps = 52/440 (11%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELYS-KCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
+ + F+ L F+ L+ + + ++ A +F + P+ L+ +++T Y
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 88 SGTPELALAF-FSRMAVLEEVS-PD----PVTLVSAASACAQLSDS-------KLGRSIH 134
S + AF F R+ V V P+ P+ L S + S K G ++
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLY 160
Query: 135 GFVKRCGLDT------HLSLANSL---------------LNLYGKTGSIKSAEILFREMP 173
V+ L + H++LA L L+ Y ++G I +A LF +MP
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGR 232
++DV SW+++LA NG A+ LF MI++ I PN VT+V L ACA L+ +
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
IH A + VS +L+D+Y KC + E A +F KK + AW + +A G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 293 MAHKSMEVFCNMLS---DGVRPDAVALVKILTAISELGVLQQAVCLHAFVT-KSGFDNN- 347
+ +++ VF M+ + ++PD + + +L A + G++ + +T + G +
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRI 400
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFY 403
E+ G LI++ + D A +V M K D IW S++ A HG E A+K
Sbjct: 401 EHYGC-LIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK--- 456
Query: 404 QMANHSDLKPNKVTFISILS 423
N L PN ++++++
Sbjct: 457 ---NLVALNPNNGGYVAMMA 473
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP+ TV L +C L++ + IH F + +L D+FV ++L++LY KCG + +A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVL--EEVSPDPVTLVSAASACAQ 123
VF K + W S++ + G E A+A F M L ++ PD +T + +AC
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 124 LSDSKLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWS 181
GR + R G++ + L++L G+ G A + M K D W
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 182 SML-AC 186
S+L AC
Sbjct: 437 SLLNAC 442
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 46/298 (15%)
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKS--MEVFCNMLSDGV-RPDAVALVKILTAISE 325
IF+R + +A + Y+ + H S F M++ V RP+ +L +
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 326 LGVLQQAVCLHAFVTKSGF--------------------------------DNNEYIGAS 353
L +H + KSGF + N +
Sbjct: 139 LSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTA 198
Query: 354 LIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKP 413
++ YA+ I NA +F M +DV W++I+AA +G EA+ LF +M N ++P
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 414 NKVTFISILSACSHAGLVE--EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
N+VT + +LSAC+ G ++ +GI F + L D +VDL G+ G L+ A
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAF---AYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 472 DIINNMPMQAGPHVWGALLGACHIHHNIK-----MGEVAAKNLFPLDPNHAGYYTLLS 524
+ M + W +++ +H + E+ N+ + P+H + LL+
Sbjct: 316 SVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/634 (28%), Positives = 308/634 (48%), Gaps = 102/634 (16%)
Query: 15 ALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
AL SC + GR IH + K LD + ++ ++++ +Y+KC + DA VF ++ K D
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 75 -------------------------------VVLWTSIVTGYERSGTPELALAFFSRMAV 103
V +T+++ GY ++ A+ F M
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
L + + VTL + SAC+ L R + + L+ + ++ +LL++Y +K
Sbjct: 167 LG-IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 164 SAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI--------------- 208
A LF EMP++++++W+ ML Y+ G A +LF+++ +K I
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 209 ----------------EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE----LETT 248
+P+ V +V L A A + +G ++H V GF+ L+ T
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 345
Query: 249 V---------------------------STALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
+ AL+ ++K E A ++F++ KD+ +W
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 405
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
+ GYA++ ++ +F M+S V+PDA+ +V + +AIS LG L++ H ++
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVF---RGMAYKDVVIWSSIIAAYGFHGQGEE 397
S N+ + A++I+MYAKC SI+ A +F + ++ + W++II HG +
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
AL L+ + + +KPN +TF+ +LSAC HAGLVE G T F+ M + + + PD +HYG M
Sbjct: 526 ALDLYSDLQSLP-IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCM 584
Query: 458 VDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHA 517
VDLLG+ G L+ A ++I MP++A +WG LL A H N+++ E+AA L +DP+H
Sbjct: 585 VDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG 644
Query: 518 GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKV 551
G +LSN+Y W + A +R +E R + V
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVR---EEMRTRDV 675
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 228/516 (44%), Gaps = 98/516 (18%)
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
E S LVSA +CA +D GR IH V + GLD++ + NS+LN+Y K + A
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 166 EILFRE-------------------------------MPDKDVISWSSMLACYADNGAAT 194
E +FR+ MP++ +S+++++ YA N +
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM 254
A++LF EM + I N VTL + + AC+ + + R + LA+ E VST L+
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 255 DMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF------------- 301
MY C ++A +F+ +P++++V W V+ GY++ G+ ++ E+F
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 302 ------------------CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
ML G++P V +V +L+A + + + LH + K G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 344 FDNNEYIGASLIEMYA-------------------------------KCSSIDNANKVFR 372
FD +++ A++I YA K ++ A +VF
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
KD+ W+++I+ Y + AL LF +M + S +KP+ +T +S+ SA S G +E
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHV--WGALL 490
EG D + N + P+ ++D+ + G ++ AL+I + + + W A++
Sbjct: 456 EGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAII 514
Query: 491 --GACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLS 524
A H H + + + P+ PN + +LS
Sbjct: 515 CGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+ +PD+ T+ + L LE G+ H +L + + + +A+I++Y+KCG +
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 63 AVEVFME---YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
A+ +F + + W +I+ G G +LAL +S + L + P+ +T V S
Sbjct: 492 ALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLS 550
Query: 120 ACAQLSDSKLGRSIHGFVKR-CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DV 177
AC +LG++ +K G++ + +++L GK G ++ A+ + ++MP K DV
Sbjct: 551 ACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADV 610
Query: 178 ISWSSMLACYADNG 191
+ W +L+ +G
Sbjct: 611 MIWGMLLSASRTHG 624
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 270/514 (52%), Gaps = 6/514 (1%)
Query: 56 KCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLV 115
K G +N+A+++F E P+ DVV W ++++G G E + F M E + P T
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE-IRPTEFTFS 140
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTH-LSLANSLLNLYGKTGSIKSAEILFREMPD 174
AS + + G IHG G+ + L + NS++++Y + G A +F M D
Sbjct: 141 ILASLVTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+DV+SW+ ++ +D+G ALD F M + I+P+ T+ + C+ L +G++
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMA 294
L + GF + V A +DM+ KC+ +++V +F + K D V + G Y+
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
++ +F ++ VRPD +L++++ + +L +H+ V K GFD + + SL
Sbjct: 318 EDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSL 376
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
+EMY K S+D A VF KD++ W+++I + + E+L +F Q+ + LKP+
Sbjct: 377 MEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPD 436
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
+VT + IL AC +AG V EGI IF M + + P +EHY +++LL R+G ++ A DI
Sbjct: 437 RVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIA 496
Query: 475 NNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
+ +P + H+W +L A + ++ E AK + +P + Y +L IY + W
Sbjct: 497 DKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWE 556
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
N+ KLR + E++LK G S + +++ V SF A
Sbjct: 557 NSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 187/376 (49%), Gaps = 34/376 (9%)
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYA 188
L + +H + G N L LY K+GS+ +A LF ++PDK+ I+W+ L
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY--------------------- 227
NG NALDLF+EM ++ + +W T++S L +C Y
Sbjct: 82 KNGYLNNALDLFDEMPERDV-VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 228 --------LEEGRKIHQLAVSYGF-ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
+ G +IH A+ G V ++MDMY + + A+ +F + +DV
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAF 338
V+W L +++G +++ F M ++PD + +++ S+L L + A
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEA 398
K GF +N + + I+M++KC+ +D++ K+FR + D V+ +S+I +Y +H GE+A
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA 320
Query: 399 LKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
L+LF +A ++P+K TF S+LS+ +A +++ G + +++ K D+ ++
Sbjct: 321 LRLFI-LAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVI-KLGFDLDTAVATSLM 377
Query: 459 DLLGRMGELDRALDII 474
++ + G +D A+ +
Sbjct: 378 EMYFKTGSVDLAMGVF 393
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 192/389 (49%), Gaps = 13/389 (3%)
Query: 6 RPDSHTVSI--ALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
RP T SI +L +CV + G I + + NL V ++++++Y + G + A
Sbjct: 133 RPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNL----VVWNSVMDMYRRLGVFDYA 188
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+ VF+ DVV W ++ SG E+AL F M + E+ PD T+ S C+
Sbjct: 189 LSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM-EIQPDEYTVSMVVSICSD 247
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
L + G+ + G ++ + + ++++ K + + LFRE+ D + +SM
Sbjct: 248 LRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSM 307
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ Y+ + +AL LF + + + P+ T S L + +A L+ G +H L + GF
Sbjct: 308 IGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGF 366
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+L+T V+T+LM+MY K S + A+ +F + KD++ W + G A A +S+ +F
Sbjct: 367 DLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQ 426
Query: 304 ML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN--NEYIGASLIEMYAK 360
+L + ++PD V L+ IL A G + + + + + + K+ N NE+ A +IE+ +
Sbjct: 427 LLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHY-ACIIELLCR 485
Query: 361 CSSIDNANKVFRGMAYKDVV-IWSSIIAA 388
I+ A + + ++ IW I+ A
Sbjct: 486 VGMINEAKDIADKIPFEPSSHIWEPILCA 514
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M + RPD T S L S + L+ G +H + K D D V ++L+E+Y K G +
Sbjct: 328 MTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A+ VF + D++ W +++ G R+ +LA F+++ + + + PD VTL+ A
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 121 C 121
C
Sbjct: 447 C 447
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 272/520 (52%), Gaps = 41/520 (7%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREM 172
TL+S +C ++ SIH + R D + L+ + S+ A +F +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
+ +V +++M+ + +G + + + L++ MI + P+ + S L+AC L+ R
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCR 143
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
+IH + GF +V +M++Y K NA +F+ +P +D VA V+ Y+E G
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 293 M-------------------------------AHKSMEVFCNMLSDGVRPDAVALVKILT 321
+K++E+F M + V + V +L+
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVI 381
A S+LG L+ +H+FV + + ++G +LI MY++C I+ A +VFR M KDV+
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 382 WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
++++I+ HG EA+ F M N +PN+VT +++L+ACSH GL++ G+ +F+ M
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRG-FRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 442 VNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKM 501
+ + P EHYG +VDLLGR+G L+ A I N+P++ + G LL AC IH N+++
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 502 GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKN 561
GE AK LF + +G Y LLSN+Y W + ++R ++++ ++K G S +E+ N
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Query: 562 EVHSFVASDRFHDESDQIFEVLRKLDVKMREECYEHQLKI 601
++H F+ D H + I++ L++L+ +R + E+Q+ I
Sbjct: 503 QIHEFLVGDIAHPHKEAIYQRLQELNRILRFK--ENQIDI 540
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 223/510 (43%), Gaps = 83/510 (16%)
Query: 7 PDSHTVSIA--------LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG 58
PDS+T+ ++ L+SC + + IH + + D D FV LI + S
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLD 75
Query: 59 EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAA 118
++ A +VF P+V L+T+++ G+ SG ++ + RM + V PD + S
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM-IHNSVLPDNYVITSVL 134
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
AC D K+ R IH V + G + S+ ++ +YGK+G + +A+ +F EMPD+D +
Sbjct: 135 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 179 SWSSMLACYAD-------------------------------NGAATNALDLFNEMIDKR 207
+ + M+ CY++ N AL+LF EM +
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
+ N T V L AC+ LE GR +H + EL V AL++MY +C A
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
+F + KDV+++ + G A G + +++ F +M++ G RP+ V LV +L A S G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
+L + L F + N E IE Y I+
Sbjct: 371 LLD--IGLEVFNSMKRVFNVE----PQIEHYG------------------------CIVD 400
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
G G+ EEA Y+ + ++P+ + ++LSAC G +E G I +
Sbjct: 401 LLGRVGRLEEA----YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN- 455
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNM 477
PDS Y ++ +L G+ + +I +M
Sbjct: 456 -PDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 188/401 (46%), Gaps = 46/401 (11%)
Query: 1 MHATARPDSHTVSIALKSC----------------------VGLQKLEV----GRMIHGF 34
+H + PD++ ++ LK+C VGL+ +E+ G +++
Sbjct: 119 IHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAK 178
Query: 35 -LKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPEL 93
+ E D D + +I YS+CG + +A+E+F + D V WT+++ G R+
Sbjct: 179 KMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK 238
Query: 94 ALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
AL F M +E VS + T V SAC+ L +LGR +H FV+ ++ + N+L+
Sbjct: 239 ALELFREMQ-MENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALI 297
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
N+Y + G I A +FR M DKDVIS+++M++ A +GA+ A++ F +M+++ PN V
Sbjct: 298 NMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQV 357
Query: 214 TLVSALRACASASYLEEGRKI-HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
TLV+ L AC+ L+ G ++ + + + E + ++D+ + E A
Sbjct: 358 TLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN 417
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEV---FCNMLSDGVRPDAVALVKILTAISELGVL 329
IP + ++ G H +ME+ L + PD+ V + + G
Sbjct: 418 IP---IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKW 474
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
+++ + + SG IE CS+I+ N++
Sbjct: 475 KESTEIRESMRDSG-----------IEKEPGCSTIEVDNQI 504
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 290/573 (50%), Gaps = 6/573 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+S T + ++ C L+ + +G ++ + K ++ V ++++ +YS CG++ A
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F D V W +++ G ++ E L FF M ++ V P T + C++L
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM-LMSGVDPTQFTYSIVLNGCSKLG 314
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
LG+ IH + L L N+LL++Y G ++ A +F + + +++SW+S+++
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 186 CYADNGAATNALDLFNEMIDKRI-EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
++NG A+ ++ ++ P+ T +A+ A A G+ +H G+E
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
V T L+ MY K E+A +F+ + ++DVV W + G++ G + +++ F M
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
+ R D +L ++ A S++ +L+Q H ++GFD + +L++MY K
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+ A +F + D+ W+S++ AY HG E+AL F Q+ + P+ VT++S+L+A
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG-FMPDAVTYLSLLAA 613
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM-QAGP 483
CSH G +G +++ M + + +HY MV+L+ + G +D AL++I P
Sbjct: 614 CSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
+W LL AC N+++G AA+ + LDP + LLSN+Y V+ W + A++R I
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 544 KENRLKKVLGQSMVEL-KNEVHSFVASDRFHDE 575
+ K G S +E+ N F + D+ + E
Sbjct: 733 RGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 11/390 (2%)
Query: 45 FVGSALIELYSKCGEMNDAVEVFMEYPKPDVV--LWTSIVTGYERSGTPE----LALAFF 98
+ + LI +Y +C + A +VF + P+ ++V S V Y G+ + L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLD--THLSLANS-LLNL 155
+M ++ ++V C ++ K R IH V G T AN+ L+++
Sbjct: 83 -QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 156 YGKTGSIKSAEILFREMPDKDVISWSSMLACYADN-GAATNALDLFNEMIDKRIEPNWVT 214
Y + GS++ A +F +MP ++V+S++++ + Y+ N A+ A L M + ++PN T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
S ++ CA + G ++ + G+ V T+++ MY C E+A IF+ +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
+D VAW + G + + F NML GV P +L S+LG
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+HA + S + + +L++MY C + A VF + ++V W+SII+ +G
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSA 424
GE+A+ ++ ++ S +P++ TF + +SA
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 145/291 (49%), Gaps = 3/291 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+T RPD +T S A+ + ++ G+++HG + K + +FVG+ L+ +Y K E
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A +VF + DVVLWT ++ G+ R G ELA+ FF M E+ D +L S AC+
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM-YREKNRSDGFSLSSVIGACS 514
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
++ + G H R G D +S+ +L+++YGK G ++AE +F + D+ W+S
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNS 574
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
ML Y+ +G AL F ++++ P+ VT +S L AC+ +G+ + G
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG 634
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA--WAVLFGGYAET 291
+ + ++++ K + A+++ + P + A W L T
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNT 685
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 255/508 (50%), Gaps = 41/508 (8%)
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
CA+ +++H + + G+ LAN+L+N+YGK G+ A +F EMP +D I+W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 181 SSML-ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
+S+L A N + + + P+ + ++ACA+ ++ GR++H +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 240 SYGFELETTVSTALMDMYLKCS-------------------------------SPENAVD 268
+ + V ++L+DMY KC E A++
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP-DAVALVKILTAISELG 327
+F +P K++ +W L G+ ++G ++ VF M + V D + L I+ A + L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
+H V GFD+ +I +LI+MYAKCS + A +F M ++DVV W+S+I
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
HGQ E+AL L+ M +H +KPN+VTF+ ++ ACSH G VE+G +F M Y +
Sbjct: 313 GMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 371
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P +HY ++DLLGR G LD A ++I+ MP W ALL AC +MG A
Sbjct: 372 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431
Query: 508 NL---FPL-DPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEV 563
+L F L DP+ Y LLSNIY W ++ R + E ++K G S VE++ E
Sbjct: 432 HLVSSFKLKDPS---TYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKET 488
Query: 564 HSFVASDRFHDESDQIFEVLRKLDVKMR 591
F A + H + IF +L+KL+ +MR
Sbjct: 489 EVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 219/455 (48%), Gaps = 36/455 (7%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L+ C + L + +H + K + + + L+ +Y KCG + A++VF E P D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
+ W S++T ++ L+ FS + + PD + ACA L GR +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
+ +SL+++Y K G + SA+ +F + K+ ISW++M++ YA +G
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 196 ALDLF-------------------------------NEMIDKRIEP-NWVTLVSALRACA 223
AL+LF EM +R++ + + L S + ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 224 SASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAV 283
+ + GR++H L ++ GF+ +S AL+DMY KCS A DIF+R+ +DVV+W
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS- 342
L G A+ G A K++ ++ +M+S GV+P+ V V ++ A S +G +++ L +TK
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAAYGFHGQGEEALKL 401
G + L+++ + +D A + M + D W+++++A G+G+ +++
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 402 FYQMANHSDLK-PNKVTFIS-ILSACSHAGLVEEG 434
+ + LK P+ +S I ++ S G V E
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEA 464
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 162/334 (48%), Gaps = 33/334 (9%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD S +K+C L ++ GR +H D V S+L+++Y+KCG +N A
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAV-------------------LEE 106
VF + + WT++V+GY +SG E AL F + V LE
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 107 VSP------------DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLN 154
S DP+ L S ACA L+ S GR +HG V G D+ + ++N+L++
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
+Y K + +A+ +F M +DV+SW+S++ A +G A AL L+++M+ ++PN VT
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 215 LVSALRACASASYLEEGRKIHQ-LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
V + AC+ ++E+GR++ Q + YG T L+D+ + + A ++ + +
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 274 P-KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
P D WA L G + + +++S
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D +S + +C L GR +HG + D +F+ +ALI++Y+KC ++ A ++F
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
DVV WTS++ G + G E ALA + M V V P+ VT V AC+ +
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEVTFVGLIYACSHVGFV 355
Query: 128 KLGRSI-HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSMLA 185
+ GR + K G+ L LL+L G++G + AE L MP D +W+++L+
Sbjct: 356 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 186 CYADNGAATNALDLFNEMID--KRIEPNWVTLVSALRACAS--ASYLEEGRKIHQLAV 239
G + + + ++ K +P+ L+S + A AS E RK+ ++ V
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEV 473
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 280/582 (48%), Gaps = 53/582 (9%)
Query: 35 LKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGT 90
++KE + + + LI Y++ G+ + A+++ + DV WT++++G +G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
AL F +M L V P+ VT++SA SAC+ L G +H + G + + N
Sbjct: 333 RYQALDMFRKM-FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 151 SLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
SL+++Y K G ++ A +F + +KDV +W+SM+ Y G A +LF M D + P
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 211 N---WVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
N W T++S Y+K A+
Sbjct: 452 NIITWNTMISG--------------------------------------YIKNGDEGEAM 473
Query: 268 DIFNRIPK-----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTA 322
D+F R+ K ++ W ++ GY + G +++E+F M P++V ++ +L A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 323 ISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIW 382
+ L + +H V + D + +L + YAK I+ + +F GM KD++ W
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+S+I Y HG AL LF QM + PN+ T SI+ A G V+EG +F +
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQG-ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA 652
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMG 502
N Y ++P EH MV L GR L+ AL I M +Q+ +W + L C IH +I M
Sbjct: 653 NDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
Query: 503 EVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNE 562
AA+NLF L+P + +++S IY + + + ++N LKK LGQS +E++N
Sbjct: 713 IHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNL 772
Query: 563 VHSFVASDRFHDESDQIFEVLRKLD-VKMREECYEHQLKIEE 603
+H+F D+ +D ++ ++ K+ + R + Y +L IEE
Sbjct: 773 IHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEE 814
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 228/462 (49%), Gaps = 34/462 (7%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L+SC+ + +GR++H + D+FV + L+ +Y+KCG + DA +VF + ++
Sbjct: 88 LESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
W++++ Y R F R+ + + V PD CA D + G+ IH
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLF-RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
V + G+ + L ++NS+L +Y K G + A FR M ++DVI+W+S+L Y NG
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMD 255
A++L EM + I P VT + Y + G+ A MD
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILI-----GGYNQLGK-----------------CDAAMD 303
Query: 256 MYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
+ K + D+F W + G GM ++++++F M GV P+AV
Sbjct: 304 LMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA 375
++ ++A S L V+ Q +H+ K GF ++ +G SL++MY+KC +++A KVF +
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGI 435
KDV W+S+I Y G +A +LF +M + ++L+PN +T+ +++S G E +
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQD-ANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 436 TIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+F M ++ ++ + +++ + G+ D AL++ M
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 193/425 (45%), Gaps = 71/425 (16%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD L+ C +E G++IH + K + + V ++++ +Y+KCGE++ A +
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + DV+ W S++ Y ++G E A+ M E +SP VT
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK-EGISPGLVTW------------ 285
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP----DKDVISWSS 182
N L+ Y + G +A L ++M DV +W++
Sbjct: 286 -----------------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
M++ NG ALD+F +M + PN VT++SA+ AC+ + +G ++H +AV G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
F + V +L+DMY KC E+A +F+ + KDV W + GY + G K+ E+F
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
M +RP+ + +++ + G +A+ L + K G
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG------------------- 483
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
KV R A W+ IIA Y +G+ +EAL+LF +M S PN VT +S+L
Sbjct: 484 ------KVQRNTA-----TWNLIIAGYIQNGKKDEALELFRKM-QFSRFMPNSVTILSLL 531
Query: 423 SACSH 427
AC++
Sbjct: 532 PACAN 536
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 190/429 (44%), Gaps = 56/429 (13%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P++ T+ A+ +C L+ + G +H K D+ VG++L+++YSKCG++ DA +V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F DV W S++TGY ++G A F+RM + P+ +T
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD-ANLRPNIITW------------ 456
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-----DKDVISWS 181
N++++ Y K G A LF+ M ++ +W+
Sbjct: 457 -----------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
++A Y NG AL+LF +M R PN VT++S L ACA+ + R+IH +
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
+ V AL D Y K E + IF + KD++ W L GGY G ++ +F
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI------GASLI 355
M + G+ P+ L I+ A +G + + + + N+ +I ++++
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA-----NDYHIIPALEHCSAMV 668
Query: 356 EMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
+Y + + ++ A + + M + + IW S + HG + A+ + N L+P
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAI---HAAENLFSLEPE 725
Query: 415 KVTFISILS 423
SI+S
Sbjct: 726 NTATESIVS 734
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 43/417 (10%)
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTH--LSLANSLLNLYGKTGSIKSAEILFR 170
T + +C LGR +H R GL T + + LL++Y K G I A +F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 171 EMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
M ++++ +WS+M+ Y+ LF M+ + P+ L+ CA+ +E
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
G+ IH + + G VS +++ +Y KC + A F R+ ++DV+AW + Y +
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
G +++E+ M +G+ P V ++ ++LG
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG----------------------- 296
Query: 351 GASLIEMYAKC-SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
KC +++D K+ DV W+++I+ +G +AL +F +M +
Sbjct: 297 ---------KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF-LA 346
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
+ PN VT +S +SACS ++ +G + I V K + D +VD+ + G+L+
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV-KMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 470 ALDIINNMPMQAGPHVWGALL-GACHIHHNIKMGEVAAK-NLFPLDPNHAGYYTLLS 524
A + +++ + W +++ G C + K E+ + L PN + T++S
Sbjct: 406 ARKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF--ELET 247
NG+ A + + + + T + L +C + + GR +H +G E +
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILH---ARFGLFTEPDV 115
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
V T L+ MY KC +A +F+ + ++++ W+ + G Y+ + ++F M+ D
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
GV PD KIL + G ++ +H+ V K G + + S++ +YAKC +D A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
K FR M +DV+ W+S++ AY +G+ EEA++L +M + P VT+ ++ +
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG-ISPGLVTWNILIGGYNQ 294
Query: 428 AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
G + + + M + + D + M+ L G +ALD+ M
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 241/462 (52%), Gaps = 2/462 (0%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
+++S KS G L G H K L +F+ ++L+++Y KCG++ A VF E
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
+ D+V+W +++ G + AL F M E++ P+ V L + + KL
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 130 GRSIHGFVKRCGLDTHLSLANS-LLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYA 188
G+ +H V + +S L++LY K G + S +F ++ ISW+++++ YA
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT 248
NG AL M + P+ VT+ + L CA +++G++IH A+ F +
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 249 VSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
+ T+LM MY KC PE + +F+R+ +++V AW + Y E +EVF ML
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
RPD+V + ++LT S+L L+ LH + K F++ ++ A +I+MY KC + +AN
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 369 KVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
F +A K + W++II AYG + +A+ F QM + PN TF ++LS CS A
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG-FTPNTFTFTAVLSICSQA 633
Query: 429 GLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
G V+E F++M+ Y L P EHY ++++LL R G ++ A
Sbjct: 634 GFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 239/490 (48%), Gaps = 10/490 (2%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
++ T S L++CV + L G+ +H ++ L+ + F+ + L+ +Y+ CG + DA +VF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPEL--ALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
E +V W +++ G SG L+ F+ M L V + +L + + A S
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMREL-GVDLNVYSLSNVFKSFAGAS 228
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ G H + GL + L SL+++Y K G + A +F E+ ++D++ W +M+A
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 186 CYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGF 243
A N AL LF MI +++I PN V L + L L+ G+++H + S +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ V + L+D+Y KC + +F +++ ++W L GYA G +++
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M +G RPD V + +L +EL ++Q +H + K+ F N + SL+ MY+KC
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
+ ++F + ++V W+++I Y + +++F M S +P+ VT +L+
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML-LSKHRPDSVTMGRVLT 527
Query: 424 ACSHAGLVEEGITIFD-IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
CS ++ G + I+ +++ +P ++ + G+ G+L R+ + + G
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDL-RSANFSFDAVAVKG 584
Query: 483 PHVWGALLGA 492
W A++ A
Sbjct: 585 SLTWTAIIEA 594
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 182/359 (50%), Gaps = 10/359 (2%)
Query: 85 YERSGTPELALAFFSRMAVLEE--VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL 142
+ R E+AL + LE+ + + T + AC + G+ +H ++ GL
Sbjct: 86 FARQNNLEVALTI---LDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 143 DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA--TNALDLF 200
+++ L L+++Y GS+K A+ +F E +V SW+++L +G + L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 201 NEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC 260
EM + ++ N +L + ++ A AS L +G K H LA+ G + T+L+DMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 261 SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKI 319
A +F+ I ++D+V W + G A +++ +F M+S + + P++V L I
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 320 LTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
L + ++ L+ +HA V KS + ++ + LI++Y KC + + +VF G ++
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 379 VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+ W+++++ Y +G+ ++AL+ M +P+ VT ++L C+ +++G I
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWM-QQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD T++ L C L+ ++ G+ IH + K ++ + ++L+ +YSKCG +
Sbjct: 415 RPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIR 474
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + +V WT+++ Y + + F R+ +L + PD VT+ + C+ L
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
KLG+ +HG + + ++ ++ ++ +YGK G ++SA F + K ++W++++
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIE 593
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS-YGFE 244
Y N +A++ F +M+ + PN T + L C+ A +++E + L + Y +
Sbjct: 594 AYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQ 653
Query: 245 LETTVSTALMDMYLKCSSPENA 266
+ ++++ +C E A
Sbjct: 654 PSEEHYSLVIELLNRCGRVEEA 675
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 282/618 (45%), Gaps = 79/618 (12%)
Query: 46 VGSALIELYSKCGEMNDAVEVFMEYPK---PDVVLWTSIVTGYERSGTPELALAFFSRMA 102
+ + LI +Y++ G + DA VF D+ LW SI+ G E AL + M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
++ D L AC L L R+ H V + GL +L + N LL LY K G +
Sbjct: 151 Q-RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRM 209
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA- 221
A LF EMP ++ +SW+ M+ ++ +A+ +F M + +P+ VT S L
Sbjct: 210 GDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCH 269
Query: 222 ----------------------------------CASASYLEEGRKIHQLAVSYGFELET 247
CA L K+H + GFE
Sbjct: 270 SQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYL 329
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF------ 301
AL+ +Y K ++A +F +I K + +W L + + G +++ +F
Sbjct: 330 PSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM 389
Query: 302 -------------------CNMLSDG--------------VRPDAVALVKILTAISELGV 328
CN+ G V ++V + IL+ +EL
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPA 449
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L +H V ++ N + +L+ MYAKC + + VF + KD++ W+SII
Sbjct: 450 LNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKG 509
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
YG HG E+AL +F +M + S P+ + +++LSACSHAGLVE+G IF M ++ L
Sbjct: 510 YGMHGFAEKALSMFDRMIS-SGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKN 508
P EHY +VDLLGR+G L A +I+ NMPM+ V GALL +C +H N+ + E A
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 509 LFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
L L+P G Y LLSNIY W +A +R+L K+ LKKV G S +E+K + + F +
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSS 688
Query: 569 SDRFHDESDQIFEVLRKL 586
E + I+ VL L
Sbjct: 689 GSIVQSEFETIYPVLEDL 706
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 53/371 (14%)
Query: 114 LVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
L A C Q+ L + F+ R G SLA +L+++Y + G + A +F +
Sbjct: 65 LCLTAQQCRQVHAQVL---LSDFIFRSG-----SLAANLISVYARLGLLLDARNVFETVS 116
Query: 174 D---KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
D+ W+S+L +G NAL+L+ M + + + L LRAC
Sbjct: 117 LVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL 176
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
R H + G + V L+ +Y K +A ++F +P ++ ++W V+ G+++
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQ------------------- 331
++++F M + +PD V +L+ S+ G +
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEA 296
Query: 332 -----AVC-----------LHAFVTKSGFDNNEYIGA--SLIEMYAKCSSIDNANKVFRG 373
+VC +H +V K GF+ EY+ + +LI +Y K + +A +FR
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFE--EYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA--NH-SDLKPNKVTFISILSACSHAGL 430
+ K + W+S+I ++ G+ +EAL LF ++ NH ++K N VT+ S++ C+ G
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 431 VEEGITIFDIM 441
++ + F M
Sbjct: 415 GDDSLEYFRQM 425
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 270/488 (55%), Gaps = 9/488 (1%)
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
AC +L + + ++GF+ G + + N +L ++ K G I A LF E+P++++ S
Sbjct: 132 ACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
+ S+++ + + G A +LF M ++ + T LRA A + G+++H A+
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL 251
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
G T VS L+DMY KC E+A F +P+K VAW + GYA G + +++
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 300 VFCNMLSDGVRPDAVAL---VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
+ +M GV D L ++I T +++L + +QA HA + ++GF++ +L++
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA---HASLIRNGFESEIVANTALVD 368
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
Y+K +D A VF + K+++ W++++ Y HG+G +A+KLF +M +++ PN V
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPNHV 427
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINN 476
TF+++LSAC+++GL E+G IF M + + P + HY M++LLGR G LD A+ I
Sbjct: 428 TFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR 487
Query: 477 MPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNA 536
P++ ++W ALL AC + N+++G V A+ L+ + P G Y ++ N+Y A
Sbjct: 488 APLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEA 547
Query: 537 AKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQI-FEVLRKLDVKMREECY 595
A + ++ L + + VE+ ++ HSF++ DRF ++ + ++ +K+D ++ EE
Sbjct: 548 AGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVD-ELMEEIS 606
Query: 596 EHQLKIEE 603
E+ EE
Sbjct: 607 EYGYSEEE 614
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 194/383 (50%), Gaps = 9/383 (2%)
Query: 11 TVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
T +++C+ L+ + + ++GF+ + + ++ + ++ ++ KCG + DA +F E
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP-DPVTLVSAASACAQLSDSKL 129
P+ ++ + SI++G+ G A F M EE+S + T A A L +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM--WEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G+ +H + G+ + ++ L+++Y K G I+ A F MP+K ++W++++A YA
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV 249
+G + AL L +M D + + TL +R + LE ++ H + GFE E
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+TAL+D Y K + A +F+++P+K++++W L GGYA G ++++F M++ V
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKS---GFDNNEYIGASLIEMYAKCSSIDN 366
P+ V + +L+A + G+ +Q F++ S G A +IE+ + +D
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQG--WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 367 ANKVFRGMAYKDVV-IWSSIIAA 388
A R K V +W++++ A
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNA 503
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 3/280 (1%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
++HT ++ L++ GL + VG+ +H K + + FV LI++YSKCG++ DA F
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
P+ V W +++ GY G E AL M VS D TL +L+
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRD-SGVSIDQFTLSIMIRISTKLAKL 341
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+L + H + R G ++ + +L++ Y K G + +A +F ++P K++ISW++++ Y
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGFELE 246
A++G T+A+ LF +MI + PN VT ++ L ACA + E+G +I ++ +G +
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVV-AWAVLF 285
++++ + + A+ R P K V WA L
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL 501
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 242/443 (54%), Gaps = 10/443 (2%)
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
+P S C L G +H + L +L +++ L+ LY G + A +F
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 170 REMPDKDV--ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
M +D +W+S+++ YA+ G +A+ L+ +M + ++P+ T L+AC
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
++ G IH+ V GF + V AL+ MY KC A ++F+ IP KD V+W + G
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
Y G+ H+++++F M+ +G+ PD VA+ +L + +Q LH +V + G +
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQ---LHGWVIRRGMEWE 327
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+ +LI +Y+K + A +F M +D V W++II+A H + LK F QM +
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQM-H 383
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
++ KP+ +TF+S+LS C++ G+VE+G +F +M +Y + P EHY MV+L GR G +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 468 DRALD-IINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNI 526
+ A I+ M ++AGP VWGALL AC++H N +GEVAA+ LF L+P++ + LL I
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRI 503
Query: 527 YCVDKNWHNAAKLRSLIKENRLK 549
Y K + ++R ++ + L+
Sbjct: 504 YSKAKRAEDVERVRQMMVDRGLE 526
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 210/437 (48%), Gaps = 20/437 (4%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L++C L+ ++ G +H + L ++ + S L+ LY+ CG A EVF K D
Sbjct: 99 LETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDS 158
Query: 76 --VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSI 133
W S+++GY G E A+A + +MA + V PD T AC + ++G +I
Sbjct: 159 SPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 134 HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAA 193
H + + G + + N+L+ +Y K G I A +F +P KD +SW+SML Y +G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTAL 253
ALD+F M+ IEP+ V + S L S + GR++H + G E E +V+ AL
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWELSVANAL 334
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+ +Y K A IF+++ ++D V+W + +++ ++ F M +PD
Sbjct: 335 IVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDG 391
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSIDNA-NKVF 371
+ V +L+ + G+++ L + ++K G D A ++ +Y + ++ A + +
Sbjct: 392 ITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIV 451
Query: 372 RGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
+ M + +W +++ A HG GE A + +++ D + N I I S
Sbjct: 452 QEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL--EPDNEHNFELLIRIYSKAKR 509
Query: 428 AGLVEEGITIFDIMVNK 444
A VE + +MV++
Sbjct: 510 AEDVER---VRQMMVDR 523
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 146/262 (55%), Gaps = 8/262 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T LK+C G+ +++G IH L KE D++V +AL+ +Y+KCG++ A
Sbjct: 192 KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF P D V W S++TGY G AL F R+ V + PD V + +S A++
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAI---SSVLARVL 307
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
K GR +HG+V R G++ LS+AN+L+ LY K G + A +F +M ++D +SW+++++
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL-AVSYGFE 244
++ N +N L F +M +P+ +T VS L CA+ +E+G ++ L + YG +
Sbjct: 368 AHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 245 LETTVSTALMDMYLKCSSPENA 266
+ ++++Y + E A
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEA 446
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 263/512 (51%), Gaps = 43/512 (8%)
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNL------YGK-TGSIKSAEILFRE 171
+C+ SD K+ IHGF+ R L + + +A+ LL L + K T + A +F +
Sbjct: 20 QSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 172 MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
+ + ++ ++ ++ C++ + A + +M+ RI P+ +T ++A + + G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 232 RKIHQLAVSYGFELETTVSTALMDMY-------------------------------LKC 260
+ H V +GF+ + V +L+ MY KC
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 261 SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
ENA ++F+ +P +++ W+++ GYA+ K++++F M +GV + +V ++
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 321 TAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV 380
++ + LG L+ + +V KS N +G +L++M+ +C I+ A VF G+ D +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDI 440
WSSII HG +A+ F QM + + P VTF ++LSACSH GLVE+G+ I++
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 441 MVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIK 500
M + + P EHYG +VD+LGR G+L A + I M ++ + GALLGAC I+ N +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
Query: 501 MGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELK 560
+ E L + P H+GYY LLSNIY W LR ++KE +KK G S++E+
Sbjct: 436 VAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
Query: 561 NEVHSF-VASDRFHDESDQIFEVLRKLDVKMR 591
+++ F + D+ H E +I ++ K+R
Sbjct: 496 GKINKFTMGDDQKHPEMGKIRRKWEEILGKIR 527
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 42/356 (11%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND-------AVEVFM 68
L+SC L++ IHGFL + +L D+FV S L+ L N A +F
Sbjct: 19 LQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 69 EYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
+ P++ ++ ++ + P A F+++M + + PD +T A +++
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM-LKSRIWPDNITFPFLIKASSEMECVL 134
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYA 188
+G H + R G + + NSL+++Y G I +A +F +M +DV+SW+SM+A Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 189 DNGAATNALDLFNEM--------------------IDKRIE-----------PNWVTLVS 217
G NA ++F+EM +K I+ N +VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
+ +CA LE G + ++ V + + TAL+DM+ +C E A+ +F +P+ D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
++W+ + G A G AHK+M F M+S G P V +L+A S G++++ +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 31/281 (11%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T +K+ ++ + VG H + + D++V ++L+ +Y+ CG + A +
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA------------------------ 102
F + DVV WTS+V GY + G E A F M
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 103 ------VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
E V + +VS S+CA L + G + +V + + +L L +L++++
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
+ G I+ A +F +P+ D +SWSS++ A +G A A+ F++MI P VT
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFT 354
Query: 217 SALRACASASYLEEGRKIHQ-LAVSYGFELETTVSTALMDM 256
+ L AC+ +E+G +I++ + +G E ++DM
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 145/318 (45%), Gaps = 42/318 (13%)
Query: 216 VSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSS---PEN----AVD 268
++ L++C+S S L + IH + + V++ L+ + + S+ P N A
Sbjct: 16 LALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
IF++I ++ + +L ++ K+ + ML + PD + ++ A SE+
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
+ H+ + + GF N+ Y+ SL+ MYA C I A ++F M ++DVV W+S++A
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 389 YGFHGQGEEALKLFYQMANHS------------------------------DLKPNKVTF 418
Y G E A ++F +M + + + N+
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+S++S+C+H G +E G ++ +V K + + +VD+ R G++++A+ + +P
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVV-KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 479 MQAGPHVWGALLGACHIH 496
+ W +++ +H
Sbjct: 312 -ETDSLSWSSIIKGLAVH 328
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 261/500 (52%), Gaps = 14/500 (2%)
Query: 101 MAVLEEVSPDPVTLVSAASACAQLSDSKLGRS---IHGFVKRCGLDTHLSLANSLLNLYG 157
M+V+ +L+ A+ C + K S IHG + + L + L+L
Sbjct: 1 MSVVSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAIS--KLLTAFLHLPN 58
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI---DKRIEPNWVT 214
A +F + + + +M+ + + L F M+ ++ I P+++T
Sbjct: 59 LNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLT 118
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ AC A + G++IH V G F ++ V T ++ +Y++ +A +F+ I
Sbjct: 119 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI 178
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P+ DVV W VL GY G+ + +EVF ML G+ PD ++ LTA +++G L Q
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238
Query: 334 CLHAFVTK-SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+H FV K S +++ ++G +L++MYAKC I+ A +VF+ + ++V W+++I Y +
Sbjct: 239 WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAY 298
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G ++A+ ++ +KP+ V + +L+AC+H G +EEG ++ + M +Y++ P E
Sbjct: 299 GYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHE 358
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPL 512
HY +VDL+ R G LD AL++I MPM+ VWGALL C H N+++GE+A KNL L
Sbjct: 359 HYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDL 418
Query: 513 DPNHA----GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
+ + LSNIY + A+K+R +I++ ++K G S++E+ V FV+
Sbjct: 419 EKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVS 478
Query: 569 SDRFHDESDQIFEVLRKLDV 588
D H QI V+ L V
Sbjct: 479 GDVSHPNLLQIHTVIHLLSV 498
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 156/299 (52%), Gaps = 10/299 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGEMNDAVE 65
P T + +C+ VG+ IH ++ K + D V + ++ +Y + + DA +
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 173
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF E P+PDVV W ++ GY R G L F M V + + PD ++ +A +ACAQ+
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV-KGLEPDEFSVTTALTACAQVG 232
Query: 126 DSKLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
G+ IH FV K+ +++ + + +L+++Y K G I++A +F+++ ++V SW++++
Sbjct: 233 ALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALI 292
Query: 185 ACYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYG 242
YA G A A+ + + I+P+ V L+ L ACA +LEEGR + + Y
Sbjct: 293 GGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYE 352
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA-WAVLFGGYAETGMAHKSMEV 300
+ + ++D+ + ++A+++ ++P K + + W L G HK++E+
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG----CRTHKNVEL 407
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 262/518 (50%), Gaps = 46/518 (8%)
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDT--HLSLANSLLNLYGKTGSIKSAEILFREMP--DKD 176
CA S + G+ +H + GL L+N+L Y +G + +A+ LF E+P +KD
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
+ W+++L+ ++ G N++ LF EM KR+E + V++V CA L ++ H
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 237 LAVSYGFELETTVSTALMDMYLKCS-------------------------------SPEN 265
+AV G V ALMDMY KC E
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 266 AVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAIS 324
++F+ +P+++ VAW V+ GY G + +E+ M+ G + V L +L+A +
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNE-------YIGASLIEMYAKCSSIDNANKVFRGMAYK 377
+ G L +H + K E +G +L++MYAKC +ID++ VFR M +
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+VV W+++ + HG+G + +F QM ++KP+ +TF ++LSACSH+G+V+EG
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIR--EVKPDDLTFTAVLSACSHSGIVDEGWRC 373
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHH 497
F + Y L P +HY MVDLLGR G ++ A ++ MP+ V G+LLG+C +H
Sbjct: 374 FHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 498 NIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
+++ E + L + P + Y L+SN+Y + A LR +++ ++K+ G S +
Sbjct: 433 KVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Query: 558 ELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+ + VH F + DR H + +I+ L ++ ++R Y
Sbjct: 493 YVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGY 530
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 208/445 (46%), Gaps = 48/445 (10%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDG--DMFVGSALIELYSKCGEMNDAVEVF 67
V + L+ C L G+ +H L L ++ +AL + Y+ GEM A ++F
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 68 MEYP--KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
E P + D V WT++++ + R G ++ F M + V D V++V CA+L
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR-RKRVEIDDVSVVCLFGVCAKLE 125
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTG------------------------- 160
D + HG + G+ T + + N+L+++YGK G
Sbjct: 126 DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185
Query: 161 ------SIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP-NWV 213
++ +F EMP+++ ++W+ M+A Y G L+L EM+ + N+V
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFEL-------ETTVSTALMDMYLKCSSPENA 266
TL S L ACA + L GR +H A+ + + V TAL+DMY KC + +++
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+++F + K++VV W LF G A G +++F M+ + V+PD + +L+A S
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHS 364
Query: 327 GVLQQA-VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSS 384
G++ + C H+ + G + A ++++ + I+ A + R M + V+ S
Sbjct: 365 GIVDEGWRCFHS-LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGS 423
Query: 385 IIAAYGFHGQGEEALKLFYQMANHS 409
++ + HG+ E A ++ ++ S
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMS 448
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 284/534 (53%), Gaps = 39/534 (7%)
Query: 28 GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
GR++H L + + + L+ Y +CG++ DA +VF E PK D+ ++ R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS 147
+G + +L FF M + + D + S A L D + G+ IH V + ++
Sbjct: 95 NGYYQESLDFFREM-YKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
+ +SL+++Y K G + +A +F ++ ++D++ +++M++ YA+N A AL+L +M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 208 IEPN---WVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
I+P+ W L+S S++ K+ ++ + +D Y
Sbjct: 214 IKPDVITWNALISGF------SHMRNEEKVSEI-----------LELMCLDGY------- 249
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
K DVV+W + G K+ + F ML+ G+ P++ ++ +L A +
Sbjct: 250 ----------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSS 384
L ++ +H + +G +++ ++ ++L++MY KC I A +FR K V ++S
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 385 IIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNK 444
+I Y HG ++A++LF QM + K + +TF +IL+ACSHAGL + G +F +M NK
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK 418
Query: 445 YQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEV 504
Y+++P EHY MVDLLGR G+L A ++I M M+ VWGALL AC H N+++ +
Sbjct: 419 YRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARI 478
Query: 505 AAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVE 558
AAK+L L+P ++G LL+++Y +W + +++ +IK+ R ++ LG S VE
Sbjct: 479 AAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 191/401 (47%), Gaps = 46/401 (11%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+ D+ V LK+ L E G+MIH + K + + D F+ S+LI++YSK GE+ +A +
Sbjct: 114 KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + + D+V++ ++++GY + + AL M +L + PD +T + S + +
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL-GIKPDVITWNALISGFSHMR 232
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
+ + K I E++ + DV+SW+S+++
Sbjct: 233 NEE-----------------------------KVSEI--LELMCLDGYKPDVVSWTSIIS 261
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
N A D F +M+ + PN T+++ L AC + +Y++ G++IH +V G E
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLED 321
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
V +AL+DMY KC A+ +F + PKK V + + YA G+A K++E+F M
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA------ 359
+ G + D + ILTA S G+ L + N+Y +E YA
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM------QNKYRIVPRLEHYACMVDLL 435
Query: 360 -KCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEA 398
+ + A ++ + M + D+ +W +++AA HG E A
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%), Gaps = 16/274 (5%)
Query: 217 SALRACASASYLE------------EGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
S+ R + SY+E GR +H V+ G T ++ L+ Y++C
Sbjct: 9 SSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVL 68
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
+A +F+ +PK+D+ V+ G A G +S++ F M DG++ DA + +L A
Sbjct: 69 DARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASR 128
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSS 384
L + +H V K ++++ +I +SLI+MY+K + NA KVF + +D+V++++
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNA 188
Query: 385 IIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM-VN 443
+I+ Y + Q +EAL L M +KP+ +T+ +++S SH E+ I ++M ++
Sbjct: 189 MISGYANNSQADEALNLVKDM-KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD 247
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
Y+ PD + ++ L + ++A D M
Sbjct: 248 GYK--PDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 265/544 (48%), Gaps = 15/544 (2%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R D + L C L+ G+ +H + K V +ALI +Y C + DA
Sbjct: 187 RHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL 245
Query: 66 VFMEYPKP--DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
VF E D V + ++ G E L F R + + P +T VS +C
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVF--RKMLEASLRPTDLTFVSVMGSC-- 301
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
S + +G +HG + G + + ++N+ + +Y +A +F + +KD+++W++M
Sbjct: 302 -SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTM 360
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ Y +A+ ++ M ++P+ T S L LE + + +G
Sbjct: 361 ISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGL 417
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ +S AL+ Y K E A +F R +K++++W + G+ G + +E F
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 304 MLSDGVR--PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
+L VR PDA L +L+ L HA+V + G IG +LI MY++C
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
+I N+ +VF M+ KDVV W+S+I+AY HG+GE A+ + M + + P+ TF ++
Sbjct: 538 GTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAV 597
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
LSACSHAGLVEEG+ IF+ MV + ++ + +H+ +VDLLGR G LD A ++
Sbjct: 598 LSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTI 657
Query: 482 GPH--VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
G VW AL AC H ++K+G++ AK L + + Y LSNIY W A +
Sbjct: 658 GSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEET 717
Query: 540 RSLI 543
R I
Sbjct: 718 RRAI 721
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 233/529 (44%), Gaps = 46/529 (8%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYS------- 55
T RPD ++VS+A+ + L+ G +H + + L V + L+ LY
Sbjct: 51 TTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLAS 110
Query: 56 ------------------------KCGEMNDAVEVFMEYP-KPDVVLWTSIVTGYERSGT 90
K G++ A EVF + P + DV +W +++TG + SG
Sbjct: 111 LKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGY 170
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
E ++ F M L V D + S C G+ +H V + G S+ N
Sbjct: 171 HETSVELFREMHKL-GVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 151 SLLNLYGKTGSIKSAEILFRE--MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
+L+ +Y + A ++F E + +D ++++ ++ A +L +F +M++ +
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASL 287
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
P +T VS + +C+ A+ G ++H LA+ G+E T VS A M MY A
Sbjct: 288 RPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+F + +KD+V W + Y + + +M V+ M GV+PD +L +L V
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDV 404
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L+ + A + K G + I +LI Y+K I+ A+ +F K+++ W++II+
Sbjct: 405 LEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 389 YGFHGQGEEALKLFY-QMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
+ +G E L+ F + + + P+ T ++LS C + G ++ Q
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH 496
++ ++++ + G + +L++ N M + W +L+ A H
Sbjct: 522 -KETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRH 568
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 208/454 (45%), Gaps = 53/454 (11%)
Query: 82 VTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCG 141
+TG RSG AL F+ + + PD ++ A + L D+ G +H + R G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 142 LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFN 201
L H ++N+LL+LY + G++ S + F E+ + DV SW+++L+ G A ++F+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 202 EMIDKRIEPNWVTLVSALRACASASY---------------------------------- 227
+M ++ W +++ C + Y
Sbjct: 148 KMPERDDVAIWNAMIT---GCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR--IPKKDVVAWAVLF 285
L+ G+++H L + GF + ++V AL+ MY C +A +F + +D V + V+
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 286 GGYAETGMAH-KSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
G A G +S+ VF ML +RP + V ++ + S + Q +H K+G+
Sbjct: 265 DGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ---VHGLAIKTGY 319
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
+ + + + MY+ A+KVF + KD+V W+++I++Y G+ A+ ++ +
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRM 464
M + +KP++ TF S+L+ ++E + + K+ L E ++ +
Sbjct: 380 M-HIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKN 434
Query: 465 GELDRALDIINNMPMQAGPHVWGALLGACHIHHN 498
G++++A D++ ++ W A++ +HN
Sbjct: 435 GQIEKA-DLLFERSLRKNLISWNAIISG--FYHN 465
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 232/427 (54%), Gaps = 6/427 (1%)
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEP-NWVTLVSALRACASASYLEEGRKIHQLAV 239
++M+ ++ + LF + P N ++ AL+ C + L G +IH
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
S GF ++ + T LMD+Y C + +A +F+ IPK+D V+W VLF Y +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 300 VFCNMLSD---GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
+F M +D V+PD V + L A + LG L +H F+ ++G + +L+
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
MY++C S+D A +VF GM ++VV W+++I+ +G G+EA++ F +M + P +
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG-ISPEEQ 319
Query: 417 TFISILSACSHAGLVEEGITIFDIMVN-KYQLMPDSEHYGIMVDLLGRMGELDRALDIIN 475
T +LSACSH+GLV EG+ FD M + ++++ P+ HYG +VDLLGR LD+A +I
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 476 NMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHN 535
+M M+ +W LLGAC +H ++++GE +L L AG Y LL N Y W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 536 AAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
+LRSL+KE R+ G S +EL+ VH F+ D H ++I+++L +++ +++ Y
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
Query: 596 EHQLKIE 602
++ E
Sbjct: 500 VAEITSE 506
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 190/406 (46%), Gaps = 19/406 (4%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENL--DGDMF---VGSALIELYSKC 57
+++ D H +S+ + S L R IH L + +L + D+F + + L +
Sbjct: 6 SSSSGDDHLLSLIVSSTGKLHL----RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR- 60
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
++N + VF + P + +++ + S TP F + + +P++ A
Sbjct: 61 -DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
C + D G IHG + G + L +L++LY + A +F E+P +D
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 178 ISWSSMLACYADNGAATNALDLFNEM---IDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+SW+ + +CY N + L LF++M +D ++P+ VT + AL+ACA+ L+ G+++
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMA 294
H G +S L+ MY +C S + A +F + +++VV+W L G A G
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD---NNEYIG 351
+++E F ML G+ P+ L +L+A S G++ + + + F N + G
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGE 396
++++ + +D A + + M K D IW +++ A HG E
Sbjct: 360 C-VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 16/263 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T +AL++C L L+ G+ +H F+ + L G + + + L+ +YS+CG M+ A +
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + +VV WT++++G +G + A+ F+ M +SP+ TL SAC+
Sbjct: 274 VFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF-GISPEEQTLTGLLSACSH-- 330
Query: 126 DSKLGRSIHGFVK-RCG---LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISW 180
+ + F + R G + +L +++L G+ + A L + M K D W
Sbjct: 331 SGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIW 390
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEP--NWVTLVSALRACASASYLEEGR------ 232
++L +G + + +I+ + E ++V L++ + E R
Sbjct: 391 RTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEK 450
Query: 233 KIHQLAVSYGFELETTVSTALMD 255
+IH EL+ TV ++D
Sbjct: 451 RIHTKPGCSAIELQGTVHEFIVD 473
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 228/450 (50%), Gaps = 36/450 (8%)
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASAS---------- 226
+SW+S + NG A F++M +EPN +T ++ L C +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 227 -----------------------YLEEGR-KIHQLAVSYGFELETTVSTALMDMYLKCSS 262
Y + GR K +L Y + + ++D Y++
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 263 PENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTA 322
+NA +F+++P++D+++W + G+ + G +++ F M GV+PD VA++ L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 323 ISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIW 382
+ LG L + +H +V F NN + SLI++Y +C ++ A +VF M + VV W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+S+I + +G E+L F +M KP+ VTF L+ACSH GLVEEG+ F IM
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKM-QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH-HNIKM 501
Y++ P EHYG +VDL R G L+ AL ++ +MPM+ V G+LL AC H +NI +
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 502 GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKN 561
E K+L L+ Y +LSN+Y D W A+K+R +K LKK G S +E+ +
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 562 EVHSFVASDRFHDESDQIFEVLRKLDVKMR 591
+H F+A D H E+ I EVL + +R
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 180/403 (44%), Gaps = 69/403 (17%)
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
N ++ + V WTS + R+G A FS M L V P+ +T ++ S
Sbjct: 22 NPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSG 80
Query: 121 CAQLSDSK--LGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGSIKSAEI---------- 167
C + LG +HG+ + GLD H+ + +++ +Y K G K A +
Sbjct: 81 CGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNS 140
Query: 168 ---------------------LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK 206
+F +MP++D+ISW++M+ + G AL F EM
Sbjct: 141 VTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS 200
Query: 207 RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
++P++V +++AL AC + L G +H+ +S F+ VS +L+D+Y +C E A
Sbjct: 201 GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFA 260
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+F + K+ VV+W + G+A G AH+S+ F M G +PDAV LTA S +
Sbjct: 261 RQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHV 320
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
G++++ + + +Y + IE Y ++
Sbjct: 321 GLVEEGLRYFQIM------KCDYRISPRIEHYG------------------------CLV 350
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
Y G+ E+ALKL M +KPN+V S+L+ACS+ G
Sbjct: 351 DLYSRAGRLEDALKLVQSMP----MKPNEVVIGSLLAACSNHG 389
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 34/283 (12%)
Query: 27 VGRMIHGFLKKENLDGD-MFVGSALIELYSK----------------------------- 56
+G ++HG+ K LD + + VG+A+I +YSK
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 57 --CGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
G++++A ++F + P+ D++ WT+++ G+ + G E AL +F M + V PD V +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI-SGVKPDYVAI 209
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
++A +AC L G +H +V ++ ++NSL++LY + G ++ A +F M
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+ V+SW+S++ +A NG A +L F +M +K +P+ VT AL AC+ +EEG +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 235 HQ-LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK 276
Q + Y L+D+Y + E+A+ + +P K
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD + AL +C L L G +H ++ ++ ++ V ++LI+LY +CG + A +
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF K VV W S++ G+ +G +L +F +M + PD VT A +AC+ +
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE-KGFKPDAVTFTGALTACSHVG 321
Query: 126 DSKLGRSIHGFVKRCG--LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK--DVISWS 181
+ G +K C + + L++LY + G ++ A L + MP K +V+ S
Sbjct: 322 LVEEGLRYFQIMK-CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGS 380
Query: 182 SMLAC 186
+ AC
Sbjct: 381 LLAAC 385
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 44/245 (17%)
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
N+ + V+W G ++ + F +M GV P+ + + +L+ +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 331 QAV--CLHAFVTKSGFDNNE-YIGASLIEMYAK--------------------------- 360
+A+ LH + K G D N +G ++I MY+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 361 ----CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
+DNA K+F M +D++ W+++I + G EEAL F +M S +KP+ V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYV 207
Query: 417 TFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH----YGIMVDLLGRMGELDRALD 472
I+ L+AC++ G + F + V++Y L D ++ ++DL R G ++ A
Sbjct: 208 AIIAALNACTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 473 IINNM 477
+ NM
Sbjct: 263 VFYNM 267
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 288/565 (50%), Gaps = 44/565 (7%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD+ + L+ + + R +HG++ K + + ++L+ Y + DA +
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF E P PDV+ W S+V+GY +SG + + F + +V P+ + +A +ACA+L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH-RSDVFPNEFSFTAALAACARLH 170
Query: 126 DSKLGRSIHGFVKRCGLDT-HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
S LG IH + + GL+ ++ + N L+++YGK G + A ++F+ M +KD +SW++++
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV 230
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
A + NG L F++M PN
Sbjct: 231 ASCSRNGKLELGLWFFHQM------PN--------------------------------- 251
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM 304
+T L+D ++K NA + + +P + +W + GY + + ++ E F M
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
S GVR D +L +L A++ L V+ +HA K G D+ + ++LI+MY+KC +
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+A +F M K++++W+ +I+ Y +G EA+KLF Q+ LKP++ TF+++L+
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAV 431
Query: 425 CSHAGL-VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
CSH + +E + F++M+N+Y++ P EH ++ +G+ GE+ +A +I
Sbjct: 432 CSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPL-DPNHAGY-YTLLSNIYCVDKNWHNAAKLRS 541
W ALLGAC ++K + A + L D + Y Y ++SN+Y + W ++R
Sbjct: 492 VAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRK 551
Query: 542 LIKENRLKKVLGQSMVELKNEVHSF 566
+++E+ + K +G S ++ + + S+
Sbjct: 552 IMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 1 MHATA-RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE 59
MH++ R D +++SI L + L + G +IH K LD + V SALI++YSKCG
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
+ A +F P+ ++++W +++GY R+G A+ F+++ + PD T ++ +
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 120 ACAQLS---DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DK 175
C+ + LG + + + SL+ G+ G + A+ + +E
Sbjct: 431 VCSHCEVPMEVMLGY-FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY 489
Query: 176 DVISWSSML-ACYA--DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
D ++W ++L AC A D AA E+ D + ++S L A Y E R
Sbjct: 490 DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYA-----YHERWR 544
Query: 233 KIHQL-AVSYGFELETTVSTALMDMYLKCSS 262
++ Q+ + + V ++ +D KCSS
Sbjct: 545 EVGQIRKIMRESGVLKEVGSSWIDSRTKCSS 575
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 244/476 (51%), Gaps = 44/476 (9%)
Query: 126 DSKLGRSIHGFVKRCGL-DTHLSLANSLL-----------NLYGKTGSIKSAEILFREMP 173
+ KL R +HG R L + H L L ++ G + A +F +
Sbjct: 4 ERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQ 63
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK 233
+ +V+ +++M+ CY+ G +L F+ M + I + T L++C+S S L G+
Sbjct: 64 NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKC 123
Query: 234 IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG- 292
+H + GF + ++++Y +A +F+ + +++VV W ++ G+ ++G
Sbjct: 124 VHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD 183
Query: 293 ----------MAHKS--------------------MEVFCNMLSDGVRPDAVALVKILTA 322
M+ +S +E+FC M+ G PD +V +L
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 323 ISELGVLQQAVCLHAFVTKSG-FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVI 381
+ LGVL +H+ SG F + +G +L++ Y K ++ A +FR M ++VV
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS 303
Query: 382 WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
W+++I+ +G+GE + LF M + PN+ TF+ +L+ CS+ G VE G +F +M
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 442 VNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKM 501
+ +++L +EHYG MVDL+ R G + A + NMP+ A +WG+LL AC H ++K+
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Query: 502 GEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
EVAA L ++P ++G Y LLSN+Y + W + K+R+L+K+NRL+K GQS +
Sbjct: 424 AEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 188/403 (46%), Gaps = 46/403 (11%)
Query: 31 IHGFLKKENLDGDMFVGSALIELYSKCGEMND---AVEVFMEYPKPDVVLWTSIVTGYER 87
IH L + L G + L S CG +++ A VF P+V+++ +++ Y
Sbjct: 23 IHAHLLRHFLHGSNLL---LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL 79
Query: 88 SGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL----- 142
G P +L+FFS M + D T +C+ LSD + G+ +HG + R G
Sbjct: 80 VGPPLESLSFFSSMKS-RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 143 --------------------------DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD 176
+ ++ + N ++ + +G ++ LF++M ++
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
++SW+SM++ + G AL+LF EMID+ +P+ T+V+ L AS L+ G+ IH
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 237 LAVSYG-FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH 295
A S G F+ TV AL+D Y K E A IF ++ +++VV+W L G A G
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 296 KSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD---NNEYIG 351
+++F M+ +G V P+ + +L S G +++ L + + F E+ G
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER-FKLEARTEHYG 377
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHG 393
A ++++ ++ I A K + M + +W S+++A HG
Sbjct: 378 A-MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 40/328 (12%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLD--GDMFVGSALIELYSKCGEMNDAVE 65
D +T + LKSC L L G+ +HG L + G + +G ++ELY+ G M DA +
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQK 158
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVS----------------- 108
VF E + +VV+W ++ G+ SG E L F +M+ VS
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 109 -------------PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGL-DTHLSLANSLLN 154
PD T+V+ A L G+ IH + GL +++ N+L++
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNWV 213
Y K+G +++A +FR+M ++V+SW+++++ A NG +DLF+ MI++ ++ PN
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 214 TLVSALRACASASYLEEGRKIHQLAVS-YGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
T + L C+ +E G ++ L + + E T A++D+ + A
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEV 300
+P V A A ++G +H +++
Sbjct: 399 MP---VNANAAMWGSLLSACRSHGDVKL 423
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMF-VGSALIELYSKCGEMNDAVE 65
PD TV L L L+ G+ IH + L D VG+AL++ Y K G++ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + + +VV W ++++G +G E + F M +V+P+ T + + C+
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 126 DSKLGRSIHGF-VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ G + G ++R L+ ++++L ++G I A + MP + + W S+
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 184 LACYADNGAATNALDLFNEMIDKRIEP----NWVTLVSALRACASASYLEEGR 232
L+ +G A E++ +IEP N+V L S Y EEGR
Sbjct: 412 LSACRSHGDVKLAEVAAMELV--KIEPGNSGNYVLL--------SNLYAEEGR 454
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 223/422 (52%), Gaps = 5/422 (1%)
Query: 165 AEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
A L D +W+ + Y+ + + ++ +++EM + I+PN +T L+ACAS
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVL 284
L GR+I + +GF+ + V L+ +Y C +A +F+ + +++VV+W +
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 285 FGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF 344
E G + E FC M+ PD +V +L+A G L +H+ V
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVREL 243
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
+ N +G +L++MYAK ++ A VF M K+V WS++I +G EEAL+LF +
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSK 303
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRM 464
M S ++PN VTF+ +L ACSH GLV++G F M +++ P HYG MVD+LGR
Sbjct: 304 MMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRA 363
Query: 465 GELDRALDIINNMPMQAGPHVWGALLGACHIHHNIK---MGEVAAKNLFPLDPNHAGYYT 521
G L+ A D I MP + VW LL AC IHH+ +GE K L L+P +G
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLV 423
Query: 522 LLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFE 581
+++N + + W AA++R ++KE ++KK+ G+S +EL H F + E I+E
Sbjct: 424 IVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYE 483
Query: 582 VL 583
+L
Sbjct: 484 LL 485
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 186/411 (45%), Gaps = 17/411 (4%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIEL--YSKCGEMNDA 63
+ H I LK C ++ L IHG + +L D F+ S L+ + S ++ A
Sbjct: 10 KSRKHQCLIFLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFA 66
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+ + W + GY S +P ++ +S M + P+ +T ACA
Sbjct: 67 RTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMK-RRGIKPNKLTFPFLLKACAS 125
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
GR I V + G D + + N+L++LYG A +F EM +++V+SW+S+
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ +NG + F EMI KR P+ T+V L AC L G+ +H +
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVREL 243
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
EL + TAL+DMY K E A +F R+ K+V W+ + G A+ G A +++++F
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSK 303
Query: 304 MLSD-GVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M+ + VRP+ V + +L A S G++ H +++++ +
Sbjct: 304 MMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRA 363
Query: 362 SSIDNANKVFRGMAYK-DVVIWSSIIAAYGFH------GQGEEALKLFYQM 405
++ A + M ++ D V+W ++++A H G GE+ K ++
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIEL 414
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 254/470 (54%), Gaps = 15/470 (3%)
Query: 130 GRSIHGFVKRCGL-------DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS--- 179
+S+H +K C L + L + L+ L+ + A +F ++ D +++
Sbjct: 144 AKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV 203
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W++M Y+ NG+ +AL ++ +M+ IEP ++ AL+AC L GR IH V
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSME 299
+++ V L+ +Y++ ++A +F+ + +++VV W L ++ H+
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
+F M + + L IL A S + L +HA + KS + + SL++MY
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 360 KCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
KC ++ + +VF M KD+ W+ ++ Y +G EE + LF M S + P+ +TF+
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI-ESGVAPDGITFV 442
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
++LS CS GL E G+++F+ M ++++ P EHY +VD+LGR G++ A+ +I MP
Sbjct: 443 ALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 480 QAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
+ +WG+LL +C +H N+ +GE+AAK LF L+P++ G Y ++SNIY K W N K+
Sbjct: 503 KPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKI 562
Query: 540 RSLIKENRLKKVLGQSMVELKNEVHSFVASD----RFHDESDQIFEVLRK 585
R ++K+ +KK G S V++K+++ FVA R DE +++ L++
Sbjct: 563 REMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE 612
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 198/404 (49%), Gaps = 12/404 (2%)
Query: 16 LKSCVGLQKLEVG-RMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
L +C+ + L G ++ L +L + + S LI L+S C ++ A ++F +
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 75 VV---LWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
++ +W ++ GY R+G+P AL + M + + P ++ A AC L D ++GR
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDM-LCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
IH + + + N LL LY ++G A +F M +++V++W+S+++ +
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
+LF +M ++ I +W TL + L AC+ + L G++IH + + + +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRP 311
+LMDMY KC E + +F+ + KD+ +W ++ YA G + + +F M+ GV P
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP 436
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG--ASLIEMYAKCSSIDNANK 369
D + V +L+ S+ G+ + + L + K+ F + + A L+++ + I A K
Sbjct: 437 DGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 370 VFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQMANHS 409
V M +K IW S++ + HG GE A K + + H+
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHN 539
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P + ++S+ALK+CV L+ L VGR IH + K D V + L++LY + G +DA +V
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + +VV W S+++ + F +M E + TL + AC++++
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPACSRVAA 352
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G+ IH + + + L NSL+++YGK G ++ + +F M KD+ SW+ ML C
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA NG ++LF MI+ + P+ +T V+ L C+ E G L++ + E
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG-----LSLFERMKTE 467
Query: 247 TTVSTA------LMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
VS A L+D+ + + AV + +P K W L
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 286/592 (48%), Gaps = 51/592 (8%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF----MEYP 71
L +CVG + G+ +H L+ D + L+ YS +++A + + +P
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
P W ++ Y R+ + +++ + RM + + + D T S ACA L D GR
Sbjct: 150 LP----WNVLIGSYIRNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
+HG ++ +L + N+L+++Y + G + A LF M ++D +SW++++ CY
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 192 AATNALDLFNEMIDKRIEPNWVT-----------------------------------LV 216
A L + M +E + VT ++
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 217 SALRACASASYLEEGRKIHQLAV---SYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ L+AC+ L+ G+ H L + S+ +++ V +L+ MY +CS +A +F ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
+ W + G+A + ++ + ML G P+ + L IL + +G LQ
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 334 CLHAFV-TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
H ++ + + + + SL++MYAK I A +VF M +D V ++S+I YG
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G+GE AL F M + S +KP+ VT +++LSACSH+ LV EG +F M + + + E
Sbjct: 504 GKGEVALAWFKDM-DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA-KNLFP 511
HY MVDL R G LD+A DI + +P + + LL AC IH N +GE AA K L
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 512 LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEV 563
P H G+Y LL+++Y V +W +++L+ + ++K +++E +E+
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 47/437 (10%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M R D T +K+C L GR++HG ++ + +++V +ALI +Y + G++
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM-----------------AV 103
+ A +F + D V W +I+ Y A RM
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 104 LE-----------------EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKR-CGLDTH 145
LE V V +++ AC+ + K G+ H V R C
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHD 355
Query: 146 L-SLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
+ ++ NSL+ +Y + ++ A I+F+++ + +W+S+++ +A N + L EM+
Sbjct: 356 IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEML 415
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGFELETTVSTALMDMYLKCSSP 263
PN +TL S L A L+ G++ H + ++ + +L+DMY K
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
A +F+ + K+D V + L GY G ++ F +M G++PD V +V +L+A
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 324 SELGVLQQAVCL-----HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK- 377
S ++++ L H F + ++ + ++++Y + +D A +F + Y+
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 378 DVVIWSSIIAAYGFHGQ 394
+ ++++ A HG
Sbjct: 592 SSAMCATLLKACLIHGN 608
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 162/399 (40%), Gaps = 38/399 (9%)
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
S S C ++ G+ +H GL+ L L+ Y + A+ +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
+ W+ ++ Y N ++ ++ M+ K I + T S ++ACA+ GR +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD------------------ 277
V AL+ MY + + A +F+R+ ++D
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 278 -----------------VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
+V W + GG E G ++ M + VR +VA++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 321 TAISELGVLQQAVCLHAFVTKS-GFDNN-EYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
A S +G L+ H V +S F ++ + + SLI MY++CS + +A VF+ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 379 VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIF 438
+ W+SII+ + ++ + EE L +M S PN +T SIL + G ++ G
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 439 DIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
++ + + +VD+ + GE+ A + ++M
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 286/592 (48%), Gaps = 51/592 (8%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF----MEYP 71
L +CVG + G+ +H L+ D + L+ YS +++A + + +P
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
P W ++ Y R+ + +++ + RM + + + D T S ACA L D GR
Sbjct: 150 LP----WNVLIGSYIRNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
+HG ++ +L + N+L+++Y + G + A LF M ++D +SW++++ CY
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 192 AATNALDLFNEMIDKRIEPNWVT-----------------------------------LV 216
A L + M +E + VT ++
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 217 SALRACASASYLEEGRKIHQLAV---SYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ L+AC+ L+ G+ H L + S+ +++ V +L+ MY +CS +A +F ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
+ W + G+A + ++ + ML G P+ + L IL + +G LQ
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 334 CLHAFV-TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
H ++ + + + + SL++MYAK I A +VF M +D V ++S+I YG
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G+GE AL F M + S +KP+ VT +++LSACSH+ LV EG +F M + + + E
Sbjct: 504 GKGEVALAWFKDM-DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA-KNLFP 511
HY MVDL R G LD+A DI + +P + + LL AC IH N +GE AA K L
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 512 LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEV 563
P H G+Y LL+++Y V +W +++L+ + ++K +++E +E+
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 47/437 (10%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M R D T +K+C L GR++HG ++ + +++V +ALI +Y + G++
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM-----------------AV 103
+ A +F + D V W +I+ Y A RM
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 104 LE-----------------EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKR-CGLDTH 145
LE V V +++ AC+ + K G+ H V R C
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHD 355
Query: 146 L-SLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
+ ++ NSL+ +Y + ++ A I+F+++ + +W+S+++ +A N + L EM+
Sbjct: 356 IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEML 415
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGFELETTVSTALMDMYLKCSSP 263
PN +TL S L A L+ G++ H + ++ + +L+DMY K
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
A +F+ + K+D V + L GY G ++ F +M G++PD V +V +L+A
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 324 SELGVLQQAVCL-----HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK- 377
S ++++ L H F + ++ + ++++Y + +D A +F + Y+
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 378 DVVIWSSIIAAYGFHGQ 394
+ ++++ A HG
Sbjct: 592 SSAMCATLLKACLIHGN 608
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 162/399 (40%), Gaps = 38/399 (9%)
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
S S C ++ G+ +H GL+ L L+ Y + A+ +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
+ W+ ++ Y N ++ ++ M+ K I + T S ++ACA+ GR +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD------------------ 277
V AL+ MY + + A +F+R+ ++D
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 278 -----------------VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
+V W + GG E G ++ M + VR +VA++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 321 TAISELGVLQQAVCLHAFVTKS-GFDNN-EYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
A S +G L+ H V +S F ++ + + SLI MY++CS + +A VF+ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 379 VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIF 438
+ W+SII+ + ++ + EE L +M S PN +T SIL + G ++ G
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 439 DIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
++ + + +VD+ + GE+ A + ++M
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 264/526 (50%), Gaps = 3/526 (0%)
Query: 31 IHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGT 90
+H F+ K L D + + L Y+ ++ A ++F +P+ V LW SI+ Y ++
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
L+ FS++ + + PD T A ++ D+K R IHG GL +
Sbjct: 87 FTTVLSLFSQI-LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 151 SLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
+++ Y K G I A LF +PD D+ W+ M+ Y G ++LFN M + +P
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQP 205
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N T+V+ S L +H + + + V AL++MY +C +A +F
Sbjct: 206 NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVF 265
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
N I + D+VA + L GY+ G +++ +F + G +PD V + +L + +EL
Sbjct: 266 NSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSV 325
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYG 390
+H++V + G + + + ++LI+MY+KC + A +F G+ K++V ++S+I G
Sbjct: 326 SGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLG 385
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
HG A + F ++ L P+++TF ++L C H+GL+ +G IF+ M +++ + P
Sbjct: 386 LHGFASTAFEKFTEILEMG-LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF 510
+EHY MV L+G G+L+ A + + ++ + GALL C +H N + EV A+N+
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 511 P-LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQS 555
+ + Y +LSN+Y W +LR I E+ K+ G S
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 1/332 (0%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ + RPD+ T + + + R IHG L D GSA+++ YSK G +
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLI 157
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+A ++F P PD+ LW ++ GY G + + F+ M P+ T+V+ S
Sbjct: 158 VEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH-QPNCYTMVALTSG 216
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
S + S+H F + LD+H + +L+N+Y + I SA +F + + D+++
Sbjct: 217 LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVAC 276
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
SS++ Y+ G AL LF E+ +P+ V + L +CA S G+++H +
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR 336
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
G EL+ V +AL+DMY KC + A+ +F IP+K++V++ L G G A + E
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
F +L G+ PD + +L G+L +
Sbjct: 397 FTEILEMGLIPDEITFSALLCTCCHSGLLNKG 428
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 137/247 (55%), Gaps = 2/247 (0%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
H +P+ +T+ + L V +H F K NLD +VG AL+ +YS+C +
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
A VF +PD+V +S++TGY R G + AL F+ + + PD V + +C
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR-MSGKKPDCVLVAIVLGSC 318
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
A+LSDS G+ +H +V R GL+ + + ++L+++Y K G +K A LF +P+K+++S++
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI-HQLAVS 240
S++ +G A+ A + F E+++ + P+ +T + L C + L +G++I ++
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 241 YGFELET 247
+G E +T
Sbjct: 439 FGIEPQT 445
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 4/349 (1%)
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
+ +H FV + L A L Y + SA LF P++ V W+S++ YA
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG-RKIHQLAVSYGFELETTV 249
T L LF++++ P+ T R S S+ +G R IH +A+ G +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARG-FSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGV 309
+A++ Y K A +F IP D+ W V+ GY G K + +F M G
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
+P+ +V + + + + +L A +HAF K D++ Y+G +L+ MY++C I +A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
VF ++ D+V SS+I Y G +EAL LF ++ S KP+ V +L +C+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAELS 322
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
G + ++ + L D + ++D+ + G L A+ + +P
Sbjct: 323 DSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 256/500 (51%), Gaps = 14/500 (2%)
Query: 101 MAVLEEVSPDPVTLVSAASACAQLSDSKLGRS---IHGFVKRCGLDTHLSLANSLLNLYG 157
M+V+ +L+ A+ C + K S IHG + + L + L+L
Sbjct: 1 MSVVSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAIS--KLLTAFLHLPN 58
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI---DKRIEPNWVT 214
A +F + + + +M+ + + L F M+ ++ I P+++T
Sbjct: 59 LNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLT 118
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYG-FELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ AC A + G++IH V G F + V T ++ +Y++ +A +F+ I
Sbjct: 119 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI 178
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P+ DVV W VL GY G+ + +EVF ML G+ PD ++ LTA +++G L Q
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238
Query: 334 CLHAFVTKSGF-DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+H FV K + +++ ++G +L++MYAKC I+ A +VF + ++V W+++I Y +
Sbjct: 239 WIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAY 298
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G ++A ++ +KP+ V + +L+AC+H G +EEG T+ + M +Y + P E
Sbjct: 299 GYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHE 358
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPL 512
HY +VDL+ R G LD ALD+I MPM+ VWGALL C H N+++GE+A +NL L
Sbjct: 359 HYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDL 418
Query: 513 DPNHA----GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVA 568
+ + LSNIY + A K+R +I++ ++K G S++E+ V FV+
Sbjct: 419 EKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVS 478
Query: 569 SDRFHDESDQIFEVLRKLDV 588
D H QI ++ L V
Sbjct: 479 GDVSHPNLLQIHTLIHLLSV 498
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 155/299 (51%), Gaps = 10/299 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGEMNDAVE 65
P T + +C+ VG+ IH ++ K + D V + ++ +Y + + DA +
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARK 173
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF E P+PDVV W ++ GY R G L F M V + PD ++ +A +ACAQ+
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV-RGIEPDEFSVTTALTACAQVG 232
Query: 126 DSKLGRSIHGFVKRCG-LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
G+ IH FVK+ +++ + + +L+++Y K G I++A +F ++ ++V SW++++
Sbjct: 233 ALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
Query: 185 ACYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRK-IHQLAVSYG 242
YA G A A + + + I+P+ V L+ L ACA +LEEGR + + YG
Sbjct: 293 GGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA-WAVLFGGYAETGMAHKSMEV 300
+ + ++D+ + ++A+D+ ++P K + + W L G HK++E+
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR----THKNVEL 407
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 245/466 (52%), Gaps = 39/466 (8%)
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
K G+ IH + + G L+++ LL L+ K G + A +F E+P + +++ M++ Y
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC---ASASYLEEG--RKIHQLAVSYG 242
+G L L M + + TL L+A S L R +H +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 243 FELETTVSTALMDMYLK---------------------CSS----------PENAVDIFN 271
EL+ + TAL+D Y+K C+S E+A +IFN
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 272 RIPKKDVVAWAVLFGGYAETG-MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
KD+V + + G++ +G A +S++++ +M G P+ ++ A S L +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYG 390
+HA + KSG + +G+SL++MYAKC I++A +VF M K+V W+S+I YG
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
+G EEAL+LF +M ++PN VTF+ LSACSH+GLV++G IF+ M Y + P
Sbjct: 351 KNGNPEEALELFTRMKEFR-IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF 510
EHY +VDL+GR G+L++A + MP + +W ALL +C++H N+++ +AA LF
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 511 PLDPN-HAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQS 555
L+ + G Y LSN+Y + W N +K+R ++K R+ K +G+S
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 195/424 (45%), Gaps = 42/424 (9%)
Query: 15 ALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD 74
AL+ + + G+ IH + K D+ + L+ L+ KCG ++ A +VF E PKP
Sbjct: 40 ALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPT 99
Query: 75 VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL-----VSAASACAQLSDSKL 129
+ + +++GY + G + L RM+ E D TL S + + L
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYSGE-KADGYTLSMVLKASNSRGSTMILPRSL 158
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
R +H + +C ++ L +L++ Y K+G ++SA +F M D++V+ +SM++ Y +
Sbjct: 159 CRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMN 218
Query: 190 NGAATNALDLFNEMIDKRI--------------------------------EPNWVTLVS 217
G +A ++FN K I PN T S
Sbjct: 219 QGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFAS 278
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
+ AC+ + E G+++H + G + ++L+DMY KC +A +F+++ +K+
Sbjct: 279 VIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKN 338
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
V +W + GY + G +++E+F M + P+ V + L+A S G++ + +
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFE 398
Query: 338 FVTK--SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ 394
+ + S E+ A ++++ + ++ A + R M + D IW++++++ HG
Sbjct: 399 SMQRDYSMKPKMEHY-ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGN 457
Query: 395 GEEA 398
E A
Sbjct: 458 VELA 461
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T + + +C L EVG+ +H + K + + +GS+L+++Y+KCG +NDA V
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + + +V WTS++ GY ++G PE AL F+RM + P+ VT + A SAC+
Sbjct: 331 FDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEF-RIEPNYVTFLGALSACSHSGL 389
Query: 127 SKLGRSIHGFVKR-CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWSSML 184
G I ++R + + +++L G+ G + A R MP++ D W+++L
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALL 449
Query: 185 ACYADNG----AATNALDLFNEMIDKR 207
+ +G A+ A +LF DKR
Sbjct: 450 SSCNLHGNVELASIAASELFKLNADKR 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+ AL+ ++ + G+KIH + GF+ + +S L+ ++LKC A +F+ +P
Sbjct: 37 IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP 96
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG---VLQQ 331
K + A+ + GY + G+ + + + M G + D L +L A + G +L +
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 332 AVC--LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY 389
++C +HA + K + ++ + +L++ Y K +++A VF M ++VV +S+I+ Y
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 390 -----------------------------GFHGQGEEALKL--FYQMANHSDLKPNKVTF 418
GF GE A + Y + PN TF
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 419 ISILSACS-----------HAGLVEEGI 435
S++ ACS HA +++ G+
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIMKSGV 304
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 234/429 (54%), Gaps = 43/429 (10%)
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
FR + D ++++ YA GA A +F+EM KR P W +++ Y
Sbjct: 108 FFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITG--------Y 158
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
G DM + A+++F+ +P+K+V +W + G
Sbjct: 159 QRRG-----------------------DM-------KAAMELFDSMPRKNVTSWTTVISG 188
Query: 288 YAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
+++ G +++++F M D V+P+ + +V +L A + LG L+ L + ++GF +
Sbjct: 189 FSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD 248
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMA-YKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
N Y+ + IEMY+KC ID A ++F + +++ W+S+I + HG+ +EAL LF QM
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Query: 406 ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMG 465
+ KP+ VTF+ +L AC H G+V +G +F M +++ P EHYG M+DLLGR+G
Sbjct: 309 LREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVG 367
Query: 466 ELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSN 525
+L A D+I MPM+ VWG LLGAC H N+++ E+A++ LF L+P + G ++SN
Sbjct: 368 KLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSN 427
Query: 526 IYCVDKNWHNAAKLRSLIKENRLKKVLGQS-MVELKNEVHSFVASDRFHDESDQIFEVLR 584
IY ++ W ++R L+K+ + K G S VE+ +VH F D+ H S +I++VL
Sbjct: 428 IYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLE 487
Query: 585 KLDVKMREE 593
++ +M+ E
Sbjct: 488 EIFRRMKLE 496
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 3/248 (1%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
D+ V +A+I Y + G+M A+E+F P+ +V WT++++G+ ++G AL F M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
+ V P+ +T+VS ACA L + ++GR + G+ + G ++ + N+ + +Y K G I
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 163 KSAEILFREMPD-KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
A+ LF E+ + +++ SW+SM+ A +G AL LF +M+ + +P+ VT V L A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 222 CASASYLEEGRKIHQ-LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVV 279
C + +G+++ + + + + ++D+ + + A D+ +P K D V
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 280 AWAVLFGG 287
W L G
Sbjct: 387 VWGTLLGA 394
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 48/377 (12%)
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A ++F + L+ ++ Y P ++ ++ ++ + + P T +A A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLS-FDGLRPSHHTFNFIFAASA 93
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSS 182
S ++ R +H R G ++ +L+ Y K G++ A +F EM +DV W++
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 153
Query: 183 MLACYADNGAATNALDLFNEMI--------------------------------DKRIEP 210
M+ Y G A++LF+ M DK ++P
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N +T+VS L ACA+ LE GR++ A GF V A ++MY KC + A +F
Sbjct: 214 NHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLF 273
Query: 271 NRI-PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
+ ++++ +W + G A G +++ +F ML +G +PDAV V +L A G++
Sbjct: 274 EELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMV 333
Query: 330 QQAVCL-------HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVI 381
+ L H K E+ G +I++ + + A + + M K D V+
Sbjct: 334 VKGQELFKSMEEVHKISPKL-----EHYGC-MIDLLGRVGKLQEAYDLIKTMPMKPDAVV 387
Query: 382 WSSIIAAYGFHGQGEEA 398
W +++ A FHG E A
Sbjct: 388 WGTLLGACSFHGNVEIA 404
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
+ +P+ TV L +C L +LE+GR + G+ ++ +++V +A IE+YSKCG ++ A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 64 VEVFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+F E + ++ W S++ G + AL F++M + E PD VT V AC
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM-LREGEKPDAVTFVGLLLACV 328
Query: 123 Q----LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DV 177
+ +L +S+ K + L +++L G+ G ++ A L + MP K D
Sbjct: 329 HGGMVVKGQELFKSMEEVHK---ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 178 ISWSSMLACYADNG 191
+ W ++L + +G
Sbjct: 386 VVWGTLLGACSFHG 399
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 34/245 (13%)
Query: 284 LFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS 342
L Y H+S+ V N+LS DG+RP I A + + LH+ +S
Sbjct: 53 LIQAYYVHHQPHESI-VLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRS 111
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY------------- 389
GF+++ + +LI YAK ++ A +VF M+ +DV +W+++I Y
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 390 ----------------GF--HGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
GF +G EALK+F M +KPN +T +S+L AC++ G +
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLG 491
E G + + + + +++ + G +D A + + Q W +++G
Sbjct: 232 EIGRRL-EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIG 290
Query: 492 ACHIH 496
+ H
Sbjct: 291 SLATH 295
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 268/541 (49%), Gaps = 24/541 (4%)
Query: 63 AVEVFMEYP-KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
A ++F + P + D L S++ Y + + A + + +PD T + +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
+ G +H + R G + ++ ++++Y K G + A F EMP + +SW+
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL-RACASASYLEEGRKI-----H 235
++++ Y G LDL +++ D+ V + +A+ + + R++ H
Sbjct: 149 ALISGYIRCGE----LDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH 295
+ +++ T ++ Y + A +F+ +P++++V+W + GGY +
Sbjct: 205 KTVITW---------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 296 KSMEVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
+ + +F M + + PD V ++ +L AIS+ G L H FV + D + ++
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
++MY+KC I+ A ++F M K V W+++I Y +G AL LF M KP+
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPD 373
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
++T +++++AC+H GLVEEG F +M + L EHYG MVDLLGR G L A D+I
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 475 NNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
NMP + + + L AC + +I+ E K L+P + G Y LL N+Y DK W
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREEC 594
+ +++++++N+ KK +G S++E+ V F++ D H I VL L + M EE
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEK 552
Query: 595 Y 595
Y
Sbjct: 553 Y 553
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 197/401 (49%), Gaps = 17/401 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T + KSC + G +H + + DM+V + ++++Y+K G+M A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P V WT++++GY R G +LA F +M +++V V + + D
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV----VIYNAMMDGFVKSGD 191
Query: 127 SKLGRSIHGFVKRCGLDTHLSLA--NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
R + + TH ++ ++++ Y I +A LF MP+++++SW++M+
Sbjct: 192 MTSARRLFDEM------THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 185 ACYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
Y N + LF EM ++P+ VT++S L A + L G H
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ + V TA++DMY KC E A IF+ +P+K V +W + GYA G A ++++F
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN-EYIGASLIEMYAKCS 362
M+ + +PD + ++ ++TA + G++++ + + G + E+ G ++++ +
Sbjct: 366 MMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGC-MVDLLGRAG 423
Query: 363 SIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLF 402
S+ A + M ++ + +I SS ++A G + E A ++
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 251/473 (53%), Gaps = 38/473 (8%)
Query: 162 IKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
I++A +F E+P+ DVIS ++++ + A F ++ I PN T + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSS-------------P----- 263
++ ++ G+++H A+ G V +A+++ Y+K S+ P
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 264 -------------ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
E A+ +F +P++ VV W + GG+++TG +++ F +ML +GV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 311 -PDAVALVKILTAISELGVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSIDNAN 368
P+ +TAIS + +HA K G N ++ SLI Y+KC +++++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 369 KVFRGM--AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
F + +++V W+S+I Y +G+GEEA+ +F +M ++L+PN VT + +L AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 427 HAGLVEEGITIFDIMVNKYQ--LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
HAGL++EG F+ VN Y + + EHY MVD+L R G A ++I +MP+ G
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 485 VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIK 544
W ALLG C IH N ++ ++AA + LDP Y +LSN Y +NW N + +R +K
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 545 ENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMRE-ECYE 596
E LK+ G S +E+++++ FV +D+ ++ D+++ +L + + E EC++
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENECWK 515
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 39/321 (12%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA-- 63
RP+ T + S + +++G+ +H + K L ++FVGSA++ Y K + DA
Sbjct: 90 RPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARR 149
Query: 64 -----------------------------VEVFMEYPKPDVVLWTSIVTGYERSGTPELA 94
+ +F P+ VV W +++ G+ ++G E A
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEA 209
Query: 95 LAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF-VKRCGLDTHLSLANSLL 153
+ F M V P+ T A +A + ++ G+SIH +K G ++ + NSL+
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
Query: 154 NLYGKTGSIKSAEILFREMPD--KDVISWSSMLACYADNGAATNALDLFNEMI-DKRIEP 210
+ Y K G+++ + + F ++ + ++++SW+SM+ YA NG A+ +F +M+ D + P
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFE---LETTVSTALMDMYLKCSSPENAV 267
N VT++ L AC A ++EG AV+ + LE ++DM + + A
Sbjct: 330 NNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAE 389
Query: 268 DIFNRIPKKDVVA-WAVLFGG 287
++ +P + W L GG
Sbjct: 390 ELIKSMPLDPGIGFWKALLGG 410
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 178/378 (47%), Gaps = 47/378 (12%)
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
+ +A +VF E P+ DV+ T+++ + + A F R+ L + P+ T +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG-IRPNEFTFGTVIG 101
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK--------------------- 158
+ D KLG+ +H + + GL +++ + +++LN Y K
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 159 -----TGSIKSAEI-----LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
+G +K E LFR MP++ V++W++++ ++ G A++ F +M+ + +
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 209 E-PNWVTLVSALRACASASYLEEGRKIHQLAVSY-GFELETTVSTALMDMYLKCSSPENA 266
PN T A+ A ++ + G+ IH A+ + G V +L+ Y KC + E++
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 267 VDIFNRI--PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD-GVRPDAVALVKILTAI 323
+ FN++ ++++V+W + GYA G +++ +F M+ D +RP+ V ++ +L A
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 324 SELGVLQQAVCLHAFVTKS--GFDNNEYIG----ASLIEMYAKCSSIDNANKVFRGMAYK 377
+ G++Q+ + + K+ +D+ + A +++M ++ A ++ + M
Sbjct: 342 NHAGLIQEG---YMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 378 -DVVIWSSIIAAYGFHGQ 394
+ W +++ H
Sbjct: 399 PGIGFWKALLGGCQIHSN 416
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 236/453 (52%), Gaps = 34/453 (7%)
Query: 177 VISWSSMLACYADNGAATNALDLFNEMID--KRIEPNWVTLVSALRACASASYLEEGRKI 234
+ + +SM+ + + + D + ++ ++P+ T+ ++AC E G ++
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-------------------- 274
H + + GF+ + V T L+ +Y + ++ +FN IP
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 275 -----------KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
++D +AW + GYA+ G + +++ VF M +GV+ + VA++ +L+A
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
++LG L Q H+++ ++ + +L+++YAKC ++ A +VF GM K+V WS
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
S + +G GE+ L+LF M + PN VTF+S+L CS G V+EG FD M N
Sbjct: 311 SALNGLAMNGFGEKCLELFSLM-KQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 369
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGE 503
++ + P EHYG +VDL R G L+ A+ II MPM+ VW +LL A ++ N+++G
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 504 VAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEV 563
+A+K + L+ + G Y LLSNIY +W N + +R +K ++K G S++E+ EV
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 489
Query: 564 HSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
H F D+ H + QI V + + ++R Y+
Sbjct: 490 HEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYK 522
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 34/313 (10%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD++TV+ +++C GL+ E G +HG + D D V + LI LY++ G ++ +
Sbjct: 105 KPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 164
Query: 66 VFMEYPKPDVVL-------------------------------WTSIVTGYERSGTPELA 94
VF P PD V W ++++GY + G A
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREA 224
Query: 95 LAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLN 154
L F M LE V + V ++S SAC QL GR H +++R + + LA +L++
Sbjct: 225 LNVFHLMQ-LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 155 LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
LY K G ++ A +F M +K+V +WSS L A NG L+LF+ M + PN VT
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 215 LVSALRACASASYLEEG-RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
VS LR C+ +++EG R + +G E + L+D+Y + E+AV I ++
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 274 PKKDVVA-WAVLF 285
P K A W+ L
Sbjct: 404 PMKPHAAVWSSLL 416
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 38/392 (9%)
Query: 31 IHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGT 90
+ G LK ++L G AL S ++ A ++ KP + S++ + +S
Sbjct: 31 VDGTLKDDHLVGHFVKAVAL----SDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPV 86
Query: 91 PELALAFFSR-MAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
PE + F+ R ++ ++ PD T+ AC L + G +HG R G D +
Sbjct: 87 PEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQ 146
Query: 150 NSLLNLYGKTGSIKS-------------------------------AEILFREMPDKDVI 178
L++LY + G + S A LF MP++D I
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
+W++M++ YA G + AL++F+ M + ++ N V ++S L AC L++GR H
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
++ ++T L+D+Y KC E A+++F + +K+V W+ G A G K +
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC-LHAFVTKSGFDNNEYIGASLIEM 357
E+F M DGV P+AV V +L S +G + + + + G + L+++
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 358 YAKCSSIDNANKVFRGMAYKD-VVIWSSIIAA 388
YA+ +++A + + M K +WSS++ A
Sbjct: 387 YARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 36/260 (13%)
Query: 266 AVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG--VRPDAVALVKILTAI 323
A I +R K + A + + ++ + KS + + +LS G ++PD + ++ A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY------------------------- 358
+ L + + + +H + GFDN+ ++ LI +Y
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 359 ------AKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
A+C + A K+F GM +D + W+++I+ Y G+ EAL +F+ M +K
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM-QLEGVK 237
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
N V IS+LSAC+ G +++G + + ++ +VDL + G++++A++
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHS-YIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Query: 473 IINNMPMQAGPHVWGALLGA 492
+ M + + W + L
Sbjct: 297 VFWGME-EKNVYTWSSALNG 315
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 257/510 (50%), Gaps = 43/510 (8%)
Query: 18 SCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVL 77
SCV + L++ + +H K+ LD ++ V ++LI Y KCG + A +F + D+V
Sbjct: 226 SCV--KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 78 WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
W +I+ +S P AL F M SP+ T VS + + GR IHG +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPE-HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNAL 197
+ G +T + L N+L++ Y K G+++ + + F + DK+++ W+++L+ YA+ L
Sbjct: 343 IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CL 401
Query: 198 DLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY 257
LF +M+ P T +AL++C + E +++H + V G+E V ++LM Y
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 258 LK-------------CSSPENAV------DIFNR-------------IPKKDVVAWAVLF 285
K S P + V I++R + + D V+W +
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
+ + + +E+F +ML +RPD V IL+ S+L L +H +TK+ F
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 346 -NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
+ ++ LI+MY KC SI + KVF K+++ W+++I+ G HG G+EAL+ F +
Sbjct: 578 CADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKE 637
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRM 464
+ KP++V+FISIL+AC H G+V+EG+ +F M Y + P+ +HY VDLL R
Sbjct: 638 TLSLG-FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARN 695
Query: 465 GELDRALDIINNMPMQAGPHVWGALLGACH 494
G L A +I MP A VW L C+
Sbjct: 696 GYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 233/523 (44%), Gaps = 43/523 (8%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
P+ TVS L SC L + G +HG LK D FVG+ L+ LY + + A +
Sbjct: 113 PNQSTVS-GLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + P + W +++ G + + FF R V S + + + +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFF-RELVRMGASLTESSFLGVLKGVSCVK 229
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
D + + +H + GLD +S+ NSL++ YGK G+ AE +F++ D++SW++++
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
A + AL LF M + PN T VS L + L GR+IH + + G E
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ AL+D Y KC + E++ F+ I K++V W L GYA + +F ML
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQML 408
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSID 365
G RP L + + LQQ LH+ + + G+++N+Y+ +SL+ YAK ++
Sbjct: 409 QMGFRPTEYTFSTALKSCC-VTELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 366 NA--------------------------------NKVFRGMAYKDVVIWSSIIAAYGFHG 393
+A K+ + D V W+ IAA
Sbjct: 465 DALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSD 524
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
EE ++LF M S+++P+K TF+SILS CS + G +I ++ D+
Sbjct: 525 YHEEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV 583
Query: 454 YGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH 496
+++D+ G+ G + + + + W AL+ IH
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIH 625
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 222/478 (46%), Gaps = 34/478 (7%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
++V + +I LY K GE++ A +VF + P+ + V + +I+ GY + G + A FS M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANS-LLNLYGKTGSI 162
+ P+ T VS +CA L D + G +HG + GL + + LL LYG+ +
Sbjct: 109 FGYL-PNQST-VSGLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
+ AE +F +MP K + +W+ M++ G + F E++ + + L+
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 223 ASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWA 282
+ L+ +++H A G + E +V +L+ Y KC + A +F D+V+W
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 283 VLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS 342
+ A++ K++++F +M G P+ V +L S + +L +H + K+
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLF 402
G + +G +LI+ YAKC +++++ F + K++V W+++++ Y + G L LF
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLF 404
Query: 403 YQMANHSDLKPNKVTFISILSACS-------HAGLVEEGITIFDIMVN-------KYQLM 448
QM +P + TF + L +C H+ +V G D +++ K QLM
Sbjct: 405 LQMLQMG-FRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 449 PDS-------------EHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGAC 493
D+ I+ + R G+ ++ +I+ + Q W + AC
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLD-GDMFVGSALIELYSKCGE 59
+ + RPD +T L C L L +G IHG + K + D FV + LI++Y KCG
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
+ ++VF E + +++ WT++++ G + AL F L PD V+ +S +
Sbjct: 597 IRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSL-GFKPDRVSFISILT 655
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVI 178
AC K G + +K G++ + ++L + G +K AE L REMP D
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715
Query: 179 SWSSML 184
W + L
Sbjct: 716 VWRTFL 721
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 205/380 (53%), Gaps = 3/380 (0%)
Query: 207 RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
++EP T L+ C +G++IH GF L + L+ +Y + A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+F + +D++ W + GY + G+ + + ++ +M + + PD + A S L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSII 386
L+ HA + K +N + ++L++MY KCSS + ++VF ++ ++V+ W+S+I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
+ YG+HG+ E LK F +M +PN VTF+ +L+AC+H GLV++G F M Y
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEG-CRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYG 341
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAA 506
+ P+ +HY MVD LGR G L A + + P + P VWG+LLGAC IH N+K+ E+AA
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAA 401
Query: 507 KNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
LDP + G Y + +N Y A+K+R ++ +KK G S +EL+ EVH F
Sbjct: 402 TKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRF 461
Query: 567 VASDRFHDESDQIFEVLRKL 586
+ D H S++I++ + ++
Sbjct: 462 MKDDTSHRLSEKIYKKVHEM 481
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 173/390 (44%), Gaps = 19/390 (4%)
Query: 13 SIALKSCVGLQKLEV---GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA---VEV 66
S L C L KL + R + + G MF G+A L E VE
Sbjct: 13 SQCLTICFKLNKLAMVYYTREFQTEASQTSASGSMFSGNATTILRRMLAEKRIGRFQVEN 72
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
+ K D L VTG + + L + S + V +P T C Q +
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEA---VGLLWSSGLQV------EPETYAVLLQECKQRKE 123
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
G+ IH + G + L LL LY +G +++A ILFR + +D+I W++M++
Sbjct: 124 YTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISG 183
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y G L ++ +M RI P+ T S RAC++ LE G++ H + + +
Sbjct: 184 YVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN 243
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V +AL+DMY KCSS + +F+++ ++V+ W L GY G + ++ F M
Sbjct: 244 IIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS--GFDNNEYIGASLIEMYAKCSSI 364
+G RP+ V + +LTA + G++ + H + K G + A++++ + +
Sbjct: 304 EGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 365 DNANK-VFRGMAYKDVVIWSSIIAAYGFHG 393
A + V + + +W S++ A HG
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 17/227 (7%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD +T + ++C L +LE G+ H + K + ++ V SAL+++Y KC +D V
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC--AQL 124
F + +V+ WTS+++GY G L F +M E P+PVT + +AC L
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE-EGCRPNPVTFLVVLTACNHGGL 325
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD-VISWSSM 183
D K + + G++ ++++ G+ G ++ A + P K+ W S+
Sbjct: 326 VD-KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 384
Query: 184 LACYADNG-------AATNALDLFNEMIDKRIEPNWVTLVSALRACA 223
L +G AAT L+L D N+V + +C
Sbjct: 385 LGACRIHGNVKLLELAATKFLEL-----DPTNGGNYVVFANGYASCG 426
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 262/517 (50%), Gaps = 45/517 (8%)
Query: 79 TSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVK 138
++++ + G+P AL + + P V L+ A AC + LG+ +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESI 73
Query: 139 RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALD 198
+ G+ + + + +SL+++YGK G + SA +F EMP+++V +W++M+ Y NG A A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 199 LFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT---------- 248
LF E+ R N VT + ++ +E+ R++ + FEL+
Sbjct: 134 LFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKAWSVMLGVY 187
Query: 249 ----------------------VSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFG 286
V + +M Y + A IF R+ +D+V W L
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
GYA+ G + +++ F NM +G PDAV + IL+A ++ G L +H+ + G +
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 307
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMA 406
N+++ +LI+MYAKC ++NA VF ++ + V +S+I+ HG+G+EAL++F M
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 367
Query: 407 NHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
+ DLKP+++TFI++L+AC H G + EG+ IF M + + P+ +H+G ++ LLGR G+
Sbjct: 368 S-LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGK 425
Query: 467 LDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGY----YTL 522
L A ++ M ++ V GALLGAC +H + +M E K + Y
Sbjct: 426 LKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLAS 485
Query: 523 LSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVEL 559
+SN+Y + W A LR +++ L+K G S + L
Sbjct: 486 ISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 197/450 (43%), Gaps = 81/450 (18%)
Query: 12 VSIALKSCVGL-QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY 70
V + L++C + ++ +G+++H K + D+ VGS+LI +Y KCG + A +VF E
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
P+ +V W +++ GY +G LA F ++V + VT + + + +
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR----NTVTWIEMIKGYGKRIEIEKA 163
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK--------------- 175
R + F + ++ + +L +Y ++ A F ++P+K
Sbjct: 164 REL--FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRI 221
Query: 176 ----------------DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL 219
D++ W++++A YA NG + +A+D F M + EP+ VT+ S L
Sbjct: 222 GDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSIL 281
Query: 220 RACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVV 279
ACA + L+ GR++H L G EL VS AL+DMY KC ENA +F I + V
Sbjct: 282 SACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 280 AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFV 339
+ A G +++E+F M S ++PD + + +LTA C+H
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA-----------CVHGGF 390
Query: 340 TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVI----WSSIIAAYGFHGQG 395
G K+F M +DV + +I G G+
Sbjct: 391 LMEGL------------------------KIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSAC 425
+EA +L +M +KPN ++L AC
Sbjct: 427 KEAYRLVKEM----HVKPNDTVLGALLGAC 452
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ TVS L +C +L+VGR +H + ++ + FV +ALI++Y+KCG++ +A V
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F V S+++ G + AL FS M L ++ PD +T ++ +AC
Sbjct: 332 FESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESL-DLKPDEITFIAVLTACVHGGF 390
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK--DVISWSSML 184
G I +K + ++ L++L G++G +K A L +EM K D + + +
Sbjct: 391 LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 185 AC 186
AC
Sbjct: 451 AC 452
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 252/499 (50%), Gaps = 21/499 (4%)
Query: 114 LVSAASACAQLSDSKLGRSIHGFVKRCGLDTH---LSLANSLLNLYGKTGSIKSAEILFR 170
+ S A C+ +S K +H F R L L +L L + A +F
Sbjct: 51 IFSLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 171 EMPDKDVISWSSML-ACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYL 228
+ + W++++ AC D A L+ +M+++ P+ T L+ACA
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 229 EEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGY 288
EG+++H V +GF + V+ L+ +Y C + A +F+ +P++ +V+W +
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKS---GFD 345
G ++++F M PD + +L+A + LG L HAF+ +
Sbjct: 228 VRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 346 NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
+ + SLIEMY KC S+ A +VF+GM +D+ W+++I + HG+ EEA+ F +M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 406 AN-HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRM 464
+ +++PN VTF+ +L AC+H G V +G FD+MV Y + P EHYG +VDL+ R
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 465 GELDRALDIINNMPMQAGPHVWGALLGA-CHIHHNIKMGEVAAKNLFPL-------DPNH 516
G + A+D++ +MPM+ +W +LL A C ++++ E A+N+ + N
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 517 AGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDES 576
+G Y LLS +Y W++ +R L+ E+ ++K G S +E+ H F A D H ++
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 526
Query: 577 DQIFEVLRKLDVKMREECY 595
QI++ L+ +D ++R Y
Sbjct: 527 KQIYQQLKVIDDRLRSIGY 545
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 192/394 (48%), Gaps = 27/394 (6%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD HT LK+C + G+ +H + K GD++V + LI LY CG ++ A +V
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F E P+ +V W S++ R G + AL F M PD T+ S SACA L
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQSVLSACAGLGS 266
Query: 127 SKLGRSIHGF-VKRCGLDTHLS--LANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
LG H F +++C +D + + NSL+ +Y K GS++ AE +F+ M +D+ SW++M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 184 LACYADNGAATNALDLFNEMIDKR--IEPNWVTLVSALRACASASYLEEGRKIHQLAV-S 240
+ +A +G A A++ F+ M+DKR + PN VT V L AC ++ +GR+ + V
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHK-SM 298
Y E ++D+ + A+D+ +P K D V W L + G + + S
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 299 EVFCNMLSDGVRPDA-----------VALVKILTAIS---ELGVLQQAVCLHAFVTKSGF 344
E+ N++ G + D V L ++ + S ++G++++ + H + G
Sbjct: 447 EIARNII--GTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 504
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD 378
+ E G S E +A +S ++++ + D
Sbjct: 505 SSIEINGISH-EFFAGDTSHPQTKQIYQQLKVID 537
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 23/387 (5%)
Query: 17 KSCVGLQKLEVGRMIHGFLKKENLDGD---MFVGSALIELYSKCGEMNDAVEVFMEYPKP 73
++C + +L + +H F + + +F+ +++L S ++N A VF
Sbjct: 56 ETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 74 DVVLWTSIVTGYERS-GTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
+W +++ E A + +M E SPD T ACA + G+
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+H + + G + + N L++LYG G + A +F EMP++ ++SW+SM+ G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV---SYGFELETTV 249
+AL LF EM + EP+ T+ S L ACA L G H + ++ V
Sbjct: 233 YDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 250 STALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS--D 307
+L++MY KC S A +F + K+D+ +W + G+A G A ++M F M+ +
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 308 GVRPDAVALVKILTAISELGVLQQA-----VCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
VRP++V V +L A + G + + + + + + E+ G ++++ A+
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPAL---EHYGC-IVDLIARAG 407
Query: 363 SIDNANKVFRGMAYK-DVVIWSSIIAA 388
I A + M K D VIW S++ A
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDA 434
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGF-LKKENLD--GDMFVGSALIELYSKC 57
M + PD +T+ L +C GL L +G H F L+K ++D D+ V ++LIE+Y KC
Sbjct: 243 MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC 302
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA-VLEEVSPDPVTLVS 116
G + A +VF K D+ W +++ G+ G E A+ FF RM E V P+ VT V
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 117 AASACAQLSDSKLGRSIHGFVKR--CGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
AC GR + R C ++ L +++L + G I A + MP
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYC-IEPALEHYGCIVDLIARAGYITEAIDMVMSMPM 421
Query: 175 K-DVISWSSMLACYADNGAA 193
K D + W S+L GA+
Sbjct: 422 KPDAVIWRSLLDACCKKGAS 441
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/599 (27%), Positives = 284/599 (47%), Gaps = 72/599 (12%)
Query: 55 SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+KC ++ A E+F + P+ + V + +++TG+ R+G + A ++ V S L
Sbjct: 125 NKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVL 183
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+S + +++ R G + + +S+++ Y K G I A LF M +
Sbjct: 184 LSGYLRAGKWNEAV--RVFQGMAVK-----EVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRK 233
++VI+W++M+ Y G + LF M + ++ N TL +AC EG +
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 234 IHQLAVSYGFELETTVSTALMDMYLKCS-------------------------------S 262
IH L E + + +LM MY K
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQ 356
Query: 263 PENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF--------------------- 301
A ++F ++P KD+V+W + G++ G K +E+F
Sbjct: 357 ISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 302 -------C---NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
C ML V P++ +L+A + L L + + +H V K N+ +
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ 476
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDL 411
SL+ MY KC + ++A K+F ++ ++V ++++I+ Y ++G G++ALKLF M S
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF-SMLESSGK 535
Query: 412 KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
+PN VTF+++LSAC H G V+ G F M + Y + P +HY MVDLLGR G LD A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 472 DIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDK 531
++I+ MP + VWG+LL A H + + E+AAK L L+P+ A Y +LS +Y +
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 532 NWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKM 590
+ ++ ++ K R+KK G S + LK EVH+F+A D ++I L+ + +M
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 181/393 (46%), Gaps = 50/393 (12%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+ +S+T+++ K+C + G IHG + + L+ D+F+G++L+ +YSK G M +A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF D V W S++TG + A F +M + VS +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM------------- 378
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
I GF + G I LF MP+KD I+W++M++
Sbjct: 379 -------IKGFSGK--------------------GEISKCVELFGMMPEKDNITWTAMIS 411
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ NG AL F++M+ K + PN T S L A AS + L EG +IH V
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML 305
+ +V +L+ MY KC + +A IF+ I + ++V++ + GY+ G K++++F +
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 306 SDGVRPDAVALVKILTAISELGVLQQA-----VCLHAFVTKSGFDNNEYIGASLIEMYAK 360
S G P+ V + +L+A +G + ++ + G D+ A ++++ +
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY----ACMVDLLGR 587
Query: 361 CSSIDNANKVFRGMAYKD-VVIWSSIIAAYGFH 392
+D+A+ + M K +W S+++A H
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTH 620
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 177/430 (41%), Gaps = 87/430 (20%)
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYA 188
+ + F++ T + NS ++ + + G+++ AE +FR+M ++ ++SW +M++ YA
Sbjct: 33 ITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYA 92
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSAL--RACASASYLEEGRKI-HQLAVSY---- 241
+NG + A +F+EM R+ ++ +++A+ C E I + AVSY
Sbjct: 93 ENGKMSKAWQVFDEM-PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMI 151
Query: 242 -GF------------ELETTV-------STALMDMYLKCSSPENAVDI------------ 269
GF ET V S L+ YL+ AV +
Sbjct: 152 TGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSC 211
Query: 270 -------------------FNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-V 309
F+R+ +++V+ W + GY + G +F M +G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 310 RPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANK 369
+ ++ L + A + ++ +H V++ + + ++G SL+ MY+K + A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 370 VFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS-------------------- 409
VF M KD V W+S+I Q EA +LF +M
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 410 ----DLKPNK--VTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGR 463
+ P K +T+ +++SA G EE + F M+ K ++ P+S + ++
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK-EVCPNSYTFSSVLSATAS 450
Query: 464 MGELDRALDI 473
+ +L L I
Sbjct: 451 LADLIEGLQI 460
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 288/558 (51%), Gaps = 35/558 (6%)
Query: 18 SCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVL 77
SC G++ LE R L E D F + +I Y+K + +A+ +F + P+ + V
Sbjct: 114 SCGGIRFLEEARK----LFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 78 WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
W++++TG+ ++G + A+ F +M V ++ SP LV+ +LS++ +G +
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPV-KDSSP-LCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD---------------KDVISWSS 182
G + + N+L+ YG+ G +++A LF ++PD K+V+SW+S
Sbjct: 228 V-SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
M+ Y G +A LF++M D R +W T++ Y+ R A+
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKD-RDTISWNTMIDG--------YVHVSRMEDAFALFSE 337
Query: 243 FELETTVSTALM-DMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
S +M Y + E A F + P+K V+W + Y + +++++F
Sbjct: 338 MPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M +G +PD L +L+A + L L+ + +H V K+ + + +LI MY++C
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRC 456
Query: 362 SSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
I + ++F M K +V+ W+++I Y FHG EAL LF M ++ + P+ +TF+S
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG-IYPSHITFVS 515
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
+L+AC+HAGLV+E F M++ Y++ P EHY +V++ G+ + A+ II +MP +
Sbjct: 516 VLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE 575
Query: 481 AGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLR 540
VWGALL AC I++N+ + VAA+ + L+P + Y LL N+Y W A+++R
Sbjct: 576 PDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVR 635
Query: 541 SLIKENRLKKVLGQSMVE 558
++ R+KK G S V+
Sbjct: 636 MNMESKRIKKERGSSWVD 653
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 215/490 (43%), Gaps = 44/490 (8%)
Query: 56 KCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLV 115
+ G + +A ++F + + V W ++++GY + A F M + V+ + T++
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN--TMI 109
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
S +C + + R + F + D+ N++++ Y K I A +LF +MP++
Sbjct: 110 SGYVSCGGIRFLEEARKL--FDEMPSRDSF--SWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL----RACASASYLEE- 230
+ +SWS+M+ + NG +A+ LF +M K P LV+ L R +A L +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-LCALVAGLIKNERLSEAAWVLGQY 224
Query: 231 -----GRK-----IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
GR+ + L V YG + + L D ++ + R K+VV+
Sbjct: 225 GSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC-KNVVS 283
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
W + Y + G + +F M D ++ ++ + ++ A L + +
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALK 400
+ + + ++ YA +++ A F K V W+SIIAAY + +EA+
Sbjct: 340 ----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 401 LFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDL 460
LF +M N KP+ T S+LSA + + G+ + I+V ++PD + ++ +
Sbjct: 396 LFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK--TVIPDVPVHNALITM 452
Query: 461 LGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF------PLDP 514
R GE+ + I + M ++ W A++G H N A NLF + P
Sbjct: 453 YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS----EALNLFGSMKSNGIYP 508
Query: 515 NHAGYYTLLS 524
+H + ++L+
Sbjct: 509 SHITFVSVLN 518
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 172/433 (39%), Gaps = 78/433 (18%)
Query: 149 ANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
N LN ++G I A +F ++ ++ ++W++M++ Y A LF+ M KR
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM-PKRD 101
Query: 209 EPNWVTLVSALRACASASYLEEGRKIH-QLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
W T++S +C +LEE RK+ ++ F T +S Y K A+
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG-----YAKNRRIGEAL 156
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNM--------------------LSD 307
+F ++P+++ V+W+ + G+ + G ++ +F M LS+
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 308 GV------------RPDAV-ALVKILTAISELGVLQQAVCL-----------HAFVTKSG 343
R D V A ++ + G ++ A CL H +
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFY 403
F N S+I+ Y K + +A +F M +D + W+++I Y + E+A LF
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 404 QMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS--------EHYG 455
+M N N ++S + G VE F+ K+ + +S + Y
Sbjct: 337 EMPNRDAHSWNM-----MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 456 IMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMG----EVAAKNLFP 511
VDL RM +I P PH +LL A N+++G ++ K + P
Sbjct: 392 EAVDLFIRM-------NIEGEKP---DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP 441
Query: 512 LDPNHAGYYTLLS 524
P H T+ S
Sbjct: 442 DVPVHNALITMYS 454
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD HT++ L + GL L +G +H + K + D+ V +ALI +YS+CGE+ ++
Sbjct: 406 KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRR 464
Query: 66 VFMEYP-KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ- 123
+F E K +V+ W +++ GY G AL F M + P +T VS +ACA
Sbjct: 465 IFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS-NGIYPSHITFVSVLNACAHA 523
Query: 124 -LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWS 181
L D + + + ++ + +SL+N+ G + A + MP + D W
Sbjct: 524 GLVDEAKAQFV-SMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 182 SML-AC--YADNGAATNALDLFNEMIDKRIEP 210
++L AC Y + G A A + + R+EP
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMS-----RLEP 609
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/500 (31%), Positives = 254/500 (50%), Gaps = 18/500 (3%)
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPD--PVTLVSAASACAQ 123
+F E P+ D+ S ++ + RSG P LA F + + SPD T AC+
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ---IHRASPDLSSHTFTPVLGACSL 96
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
LS + GR +H + + G +T +L+++Y K G + + +F + +KD++SW+++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
L+ + NG AL +F M +R+E + TL S ++ CAS L++G+++H + V G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSMEVFC 302
+L + TA++ Y A+ ++N + D V L G E F
Sbjct: 217 DL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN---RNYKEAF- 271
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
+L RP+ L L S+ L +H ++GF ++ + L++MY KC
Sbjct: 272 -LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 363 SIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH-SDLKPNKVTFISI 421
I A +FR + K VV W+S+I AY +G G +AL++F +M S + PN VTF+ +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM---P 478
+SAC+HAGLV+EG F +M KY+L+P +EHY +D+L + GE + ++ M
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 479 MQAGP-HVWGALLGACHIHHNIKMGEVAAKNLF-PLDPNHAGYYTLLSNIYCVDKNWHNA 536
Q+ P +W A+L AC ++ ++ GE A+ L P +A Y L+SN Y W
Sbjct: 451 NQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVV 510
Query: 537 AKLRSLIKENRLKKVLGQSM 556
+LR +K L K G S+
Sbjct: 511 EELRGKLKNKGLVKTAGHSL 530
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 12/333 (3%)
Query: 5 ARPD--SHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A PD SHT + L +C L E GR +H + K+ + +ALI++YSK G + D
Sbjct: 78 ASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD 137
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+V VF + D+V W ++++G+ R+G + AL F+ M E V TL S CA
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAM-YRERVEISEFTLSSVVKTCA 196
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWS 181
L + G+ +H V G D + L ++++ Y G I A ++ + D + +
Sbjct: 197 SLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLN 255
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
S+++ N A L + R PN L S+L C+ S L G++IH +A+
Sbjct: 256 SLISGCIRNRNYKEAFLLMS-----RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN 310
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
GF ++ + LMDMY KC A IF IP K VV+W + YA G K++E+F
Sbjct: 311 GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIF 370
Query: 302 CNMLSD--GVRPDAVALVKILTAISELGVLQQA 332
M + GV P++V + +++A + G++++
Sbjct: 371 REMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 286/561 (50%), Gaps = 8/561 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R + T L C G +H + +MFV SAL+ LY+ ++ A++
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F E ++ + ++ + ++G + + RM LE V+ + +T C+
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME-LEGVAKNGLTYCYMIRGCSHDR 227
Query: 126 DSKLGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
G+ +H V + G + +++ +AN L++ Y G + + F +P+KDVISW+S++
Sbjct: 228 LVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIV 287
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
+ AD G+ ++LDLF++M P+ +S L C+ S ++ G++IH + GF+
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 245 LETT-VSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ + V +AL+DMY KC+ EN+ ++ +P ++ L G+ +E+F
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGL 407
Query: 304 MLSDGVRPDAVALVKILTAISELGV---LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
M+ +G D V L +L A+S L + L +H KSG+ + + SLI+ Y K
Sbjct: 408 MIDEGTGIDEVTLSTVLKALS-LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
+ + KVF + ++ +SII Y +G G + +K+ +M + +L P++VT +S
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM-DRMNLIPDEVTILS 525
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQ 480
+LS CSH+GLVEEG IFD + +KY + P + Y MVDLLGR G +++A ++
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD 585
Query: 481 AGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLR 540
A W +LL +C IH N +G AA+ L L+P + Y +S Y ++ + ++R
Sbjct: 586 ADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIR 645
Query: 541 SLIKENRLKKVLGQSMVELKN 561
+ L + +G S V +KN
Sbjct: 646 EIAASRELMREIGYSSVVVKN 666
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 195/419 (46%), Gaps = 4/419 (0%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
T ++A C + RM +EN ++ + I+ K G + A E F E
Sbjct: 12 RTTTLAQHLCSLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDE 71
Query: 70 YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKL 129
DVV + +++G R G A+ ++ M V + T S S C+ +
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEM-VSCGLRESASTFPSVLSVCSDELFCRE 130
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYAD 189
G +H V G ++ + ++L+ LY + A LF EM D+++ + +L C+
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 190 NGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT- 248
G + +++ M + + N +T +R C+ + EG+++H L V G+ +
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 249 VSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
V+ L+D Y C ++ FN +P+KDV++W + A+ G S+++F M G
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD-NNEYIGASLIEMYAKCSSIDNA 367
RP + L S +Q +H +V K GFD ++ ++ ++LI+MY KC+ I+N+
Sbjct: 311 KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENS 370
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
+++ + ++ +S++ + G ++ +++F M + ++VT ++L A S
Sbjct: 371 ALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGT-GIDEVTLSTVLKALS 428
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 162/323 (50%), Gaps = 4/323 (1%)
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
K+G++ SA F EM +DV++++ +++ + G + A++L+ EM+ + + T S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
L C+ + EG ++H +S GF V +AL+ +Y + A+ +F+ + ++
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
+ +L + +TG + + EV+ M +GV + + ++ S ++ + LH+
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 338 FVTKSGFD-NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGE 396
V KSG++ +N ++ L++ Y+ C + + + F + KDV+ W+SI++ +G
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHY-G 455
++L LF +M +P+ F+S L+ CS ++ G I V K S H
Sbjct: 298 DSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQI-HCYVLKMGFDVSSLHVQS 355
Query: 456 IMVDLLGRMGELDRALDIINNMP 478
++D+ G+ ++ + + ++P
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLP 378
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 254 MDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDA 313
+D +K + +A + F+ + +DVV + +L G + G + +++E++ M+S G+R A
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
+L+ S+ ++ + +H V GF N ++ ++L+ +YA +D A K+F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
M +++ + + ++ + G+ + +++ +M K N +T+ ++ CSH LV E
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK-NGLTYCYMIRGCSHDRLVYE 231
Query: 434 GITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGAC 493
G + ++V + + ++VD G+L ++ N +P + W +++ C
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVC 290
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 233/448 (52%), Gaps = 14/448 (3%)
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
S C L + K IH + GL H + LL+L T + A + R++P+ V
Sbjct: 17 SKCKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVF 72
Query: 179 SWSSMLACYADNGAATN---ALDLFNEMIDKR---IEPNWVTLVSALRACA-SASYLEEG 231
++++++ N +T A L+++++ R + PN T S +A A + G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 232 RKIHQLAVSY--GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
R +H + + + V AL+ Y C A +F RI + D+ W L YA
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
+ EV + VRP+ ++LV ++ + + LG + V H +V K+ N++
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
+G SLI++Y+KC + A KVF M+ +DV ++++I HG G+E ++L+ + +
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
L P+ TF+ +SACSH+GLV+EG+ IF+ M Y + P EHYG +VDLLGR G L+
Sbjct: 313 -LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEE 371
Query: 470 ALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCV 529
A + I MP++ +W + LG+ H + + GE+A K+L L+ ++G Y LLSNIY
Sbjct: 372 AEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAG 431
Query: 530 DKNWHNAAKLRSLIKENRLKKVLGQSMV 557
W + K R L+K++R+ K G S +
Sbjct: 432 VNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 12/295 (4%)
Query: 6 RPDSHTVSIALK-SCVGLQKLEVGRMIHGFLKK--ENLDGDMFVGSALIELYSKCGEMND 62
RP+ T K S Q GR +H + K E ++ D FV +AL+ Y+ CG++ +
Sbjct: 109 RPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLRE 168
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERS---GTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
A +F +PD+ W +++ Y S + E L F RM +V P+ ++LV+
Sbjct: 169 ARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIK 224
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
+CA L + G H +V + L + + SL++LY K G + A +F EM +DV
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSC 284
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI-HQLA 238
+++M+ A +G ++L+ +I + + P+ T V + AC+ + ++EG +I + +
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETG 292
YG E + L+D+ + E A + ++P K + W G G
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M RP+ ++ +KSC L + G H ++ K NL + FVG++LI+LYSKCG +
Sbjct: 208 MRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A +VF E + DV + +++ G G + + + + + + + PD T V SA
Sbjct: 268 SFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL-ISQGLVPDSATFVVTISA 326
Query: 121 CAQLSDSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVI 178
C+ G I +K G++ + L++L G++G ++ AE ++MP K +
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Query: 179 SWSSMLACYADNG 191
W S L +G
Sbjct: 387 LWRSFLGSSQTHG 399
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 247/454 (54%), Gaps = 19/454 (4%)
Query: 142 LDTHLSLANSLLN---LYGK---TGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
L TH + LN L+G G I SA +F EM +K+V+ W+SM+ Y N +
Sbjct: 18 LITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVS 77
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS-TALM 254
A F+ ++ I W T++S Y+E G + ++ +S ++
Sbjct: 78 ARRYFDLSPERDIVL-WNTMISG--------YIEMGNMLEARSLFDQMPCRDVMSWNTVL 128
Query: 255 DMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDA 313
+ Y E +F+ +P+++V +W L GYA+ G + + F M+ +G V P+
Sbjct: 129 EGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY-IGASLIEMYAKCSSIDNANKVFR 372
+ +L+A ++LG +H + G++ + + +LI+MY KC +I+ A +VF+
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 373 GMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
G+ +D++ W+++I HG G EAL LF++M N S + P+KVTF+ +L AC H GLVE
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN-SGISPDKVTFVGVLCACKHMGLVE 307
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGA 492
+G+ F+ M + +MP+ EH G +VDLL R G L +A++ IN MP++A +W LLGA
Sbjct: 308 DGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Query: 493 CHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
++ + +GEVA + L L+P + + +LSNIY + +AA+L+ +++ KK
Sbjct: 368 SKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEA 427
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVLRKL 586
G S +E + + F +S H ++++ +LR+L
Sbjct: 428 GVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 178/353 (50%), Gaps = 22/353 (6%)
Query: 58 GEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP--DPVTLV 115
G + A +VF E + +VVLWTS++ GY + A +F ++SP D V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-------DLSPERDIVLWN 94
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
+ S ++ + RS+ + C + N++L Y G +++ E +F +MP++
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMP-C---RDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTLVSALRACASASYLEEGRKI 234
+V SW+ ++ YA NG + L F M+D+ + PN T+ L ACA + G+ +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 235 HQLAVSYGF-ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGM 293
H+ + G+ +++ V AL+DMY KC + E A+++F I ++D+++W + G A G
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 294 AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH--AFVTKSGFDNNEYIG 351
+++ +F M + G+ PD V V +L A +G+++ + F S E+ G
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALK 400
++++ ++ + A + M K D VIW++++ A + + GE AL+
Sbjct: 331 C-VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 22/310 (7%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
D+ + ++E Y+ G+M VF + P+ +V W ++ GY ++G L F RM
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLD-THLSLANSLLNLYGKTGS 161
V P+ T+ SACA+L G+ +H + + G + +++ N+L+++YGK G+
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 162 IKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
I+ A +F+ + +D+ISW++M+ A +G T AL+LF+EM + I P+ VT V L A
Sbjct: 240 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA 299
Query: 222 CASASYLEEGRK-IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVV 279
C +E+G + + + E ++D+ + AV+ N++P K D V
Sbjct: 300 CKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAV 359
Query: 280 AWAVLFGG---YAETGMAHKSME--------------VFCNMLSDGVRPDAVALVKILTA 322
WA L G Y + + ++E + N+ D R D A +K+ A
Sbjct: 360 IWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKV--A 417
Query: 323 ISELGVLQQA 332
+ + G ++A
Sbjct: 418 MRDTGFKKEA 427
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 279/582 (47%), Gaps = 55/582 (9%)
Query: 5 ARPD-SHTVSI--ALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
A PD SH +S+ A K L+ + + G L V + L+ S +
Sbjct: 25 ASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSR-------VAAQLVSCSSLLKSPD 77
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
++ +F + + + +++ G + E ++ F M L V PD +T +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLG-VKPDRLTFPFVLKSN 136
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DV 177
++L LGR++H + +D + SL+++Y KTG +K A +F E PD+ +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
+ W+ ++ Y A LF M +R +W TL+ Y++ G
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSM-PERNSGSWSTLIKG--------YVDSG------ 241
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKS 297
EL A +F +P+K+VV+W L G+++TG +
Sbjct: 242 ------ELN------------------RAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277
Query: 298 MEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+ + ML G++P+ + +L+A S+ G L + +H ++ +G + IG +L++M
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 358 YAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
YAKC +D A VF M +KD++ W+++I + HG+ +A++ F QM +S KP++V
Sbjct: 338 YAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM-YSGEKPDEVV 396
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
F+++L+AC ++ V+ G+ FD M Y + P +HY ++VDLLGR G+L+ A +++ NM
Sbjct: 397 FLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Query: 478 PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAA 537
P+ W AL AC H + E ++NL LDP G Y L + N +
Sbjct: 457 PINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVE 516
Query: 538 KLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQI 579
K R +++ ++ LG S +EL +++ F A D H + +I
Sbjct: 517 KRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 136/340 (40%), Gaps = 74/340 (21%)
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
D++ P+ +S + AC + L R +H + G L + V+ L+ SP+
Sbjct: 22 DRQASPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPD 77
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
++ IF +++ L G E S+ F ML GV+PD + +L + S
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV-------------- 370
+LG LHA K+ D + ++ SL++MYAK + +A +V
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 371 ---------------------FRGMAYKDVVIWSSIIAAY-------------------- 389
FR M ++ WS++I Y
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 390 ---------GFHGQG--EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIF 438
GF G E A+ +++M LKPN+ T ++LSACS +G + GI I
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKG-LKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 439 D-IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
I+ N +L D +VD+ + GELD A + +NM
Sbjct: 317 GYILDNGIKL--DRAIGTALVDMYAKCGELDCAATVFSNM 354
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 229/418 (54%), Gaps = 10/418 (2%)
Query: 142 LDTHLSLANSLLN-LYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLF 200
L + L LA S LN L+ + S+ F MP +++ SW+ ++ ++ +G A+ ++DLF
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSV------FWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 201 NEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLK 259
M + + P+ TL LRAC+++ + G IH L + GF VS+AL+ MY+
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 260 CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
+A +F+ +P +D V + +FGGY + G A + +F M G D+V +V +
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 320 LTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV 379
L A +LG L+ +H + + +G ++ +MY KCS +D A+ VF M+ +DV
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFD 439
+ WSS+I YG G + KLF +M ++PN VTF+ +LSAC+H GLVE+ F
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSACAHGGLVEKSWLYFR 360
Query: 440 IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNI 499
+M +Y ++P+ +HY + D + R G L+ A + +MP++ V GA+L C ++ N+
Sbjct: 361 LM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 500 KMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
++GE A+ L L P A YY L+ +Y + A LR +KE ++ KV G S +
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 191/408 (46%), Gaps = 6/408 (1%)
Query: 40 LDGDMFVGSALIELYSKCGEM-NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFF 98
L ++ + S L+ YSK + ++ VF P ++ W I+ + RSG ++ F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK 158
RM V PD TL AC+ ++K G IH + G + L ++++L+ +Y
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 159 TGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
G + A LF +MP +D + +++M Y G A L +F EM + V +VS
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
L AC L+ G+ +H + L + A+ DMY+KCS + A +F + ++DV
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAF 338
++W+ L GY G S ++F ML +G+ P+AV + +L+A + G+++++
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEE 397
+ + AS+ + ++ ++ A K M K D + ++++ +G E
Sbjct: 362 MQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSAC-SHAGLVEEGITIFDIMVNK 444
++ ++ LKP K ++ L+ S AG +E ++ M K
Sbjct: 422 GERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+ RPD T+ + L++C ++ + G +IH K +FV SAL+ +Y G++
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A ++F + P D VL+T++ GY + G L LA F M + D V +VS AC
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY-SGFALDSVVMVSLLMACG 246
Query: 123 QLSDSKLGRSIHGF-VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWS 181
QL K G+S+HG+ ++RC L+L N++ ++Y K + A +F M +DVISWS
Sbjct: 247 QLGALKHGKSVHGWCIRRCSC-LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWS 305
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSY 241
S++ Y +G + LF+EM+ + IEPN VT + L ACA +E+ +L Y
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEY 365
Query: 242 GFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK--DVVAWAVLFG 286
E ++ D + E A +P K + V AVL G
Sbjct: 366 NIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 229/438 (52%), Gaps = 37/438 (8%)
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM 254
+ + ++ M + R+ P++ T L + + +L G++ H + +G + + V T+L+
Sbjct: 45 SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLL 104
Query: 255 DMYLKCSS----------------P---------------ENAVDIFNRIPKKDVVAWAV 283
+MY C P ++A +F+ +P+++V++W+
Sbjct: 105 NMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSC 164
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDG-----VRPDAVALVKILTAISELGVLQQAVCLHAF 338
L GY G +++++F M VRP+ + +L+A LG L+Q +HA+
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM-AYKDVVIWSSIIAAYGFHGQGEE 397
+ K + + +G +LI+MYAKC S++ A +VF + + KDV +S++I +G +E
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
+LF +M ++ PN VTF+ IL AC H GL+ EG + F +M+ ++ + P +HYG M
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 458 VDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHA 517
VDL GR G + A I +MPM+ +WG+LL + +IK E A K L LDP ++
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNS 404
Query: 518 GYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESD 577
G Y LLSN+Y W +R ++ + KV G S VE++ VH FV D ES+
Sbjct: 405 GAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESE 464
Query: 578 QIFEVLRKLDVKMREECY 595
+I+ +L ++ ++RE Y
Sbjct: 465 RIYAMLDEIMQRLREAGY 482
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKR-- 207
NS++N Y K G I A LF EMP+++VISWS ++ Y G ALDLF EM +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 208 ---IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
+ PN T+ + L AC LE+G+ +H Y E++ + TAL+DMY KC S E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 265 NAVDIFNRI-PKKDVVAWAVLFGGYAETGMAHKSMEVFCNM-LSDGVRPDAVALVKILTA 322
A +FN + KKDV A++ + A G+ + ++F M SD + P++V V IL A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 323 ISELGVLQQAVC-LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVV 380
G++ + + + G + ++++Y + I A M + DV+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 381 IWSSIIAA 388
IW S+++
Sbjct: 372 IWGSLLSG 379
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 39/320 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM------ 60
PD HT L S L +G+ H + LD D FV ++L+ +YS CG++
Sbjct: 60 PDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV 119
Query: 61 -------------------------NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELAL 95
+DA ++F E P+ +V+ W+ ++ GY G + AL
Sbjct: 120 FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEAL 179
Query: 96 AFFSRMAVLEE----VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANS 151
F M + + V P+ T+ + SAC +L + G+ +H ++ + ++ + L +
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTA 239
Query: 152 LLNLYGKTGSIKSAEILFREM-PDKDVISWSSMLACYADNGAATNALDLFNEM-IDKRIE 209
L+++Y K GS++ A+ +F + KDV ++S+M+ C A G LF+EM I
Sbjct: 240 LIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN 299
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAV-SYGFELETTVSTALMDMYLKCSSPENAVD 268
PN VT V L AC + EG+ ++ + +G ++D+Y + + A
Sbjct: 300 PNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAES 359
Query: 269 IFNRIP-KKDVVAWAVLFGG 287
+P + DV+ W L G
Sbjct: 360 FIASMPMEPDVLIWGSLLSG 379
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A RP+ T+S L +C L LE G+ +H ++ K +++ D+ +G+ALI++Y+KCG +
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 63 AVEVFMEY-PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
A VF K DV +++++ G + FS M + ++P+ VT V AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 122 AQLSDSKLGRS-IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVIS 179
G+S ++ G+ + +++LYG++G IK AE MP + DV+
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 180 WSSMLA 185
W S+L+
Sbjct: 373 WGSLLS 378
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 223/414 (53%), Gaps = 10/414 (2%)
Query: 142 LDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS--WSSMLACYADNGAATNALDL 199
L T LS SL + G I + IL D+ I+ W++++ Y + + +A+ +
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRIL-----DQYPIAFLWNNIMRSYIRHESPLDAIQV 104
Query: 200 FNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLK 259
+ M+ + P+ +L ++A G+++H +AV GF + + + +Y K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164
Query: 260 CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKI 319
ENA +F+ P++ + +W + GG G A++++E+F +M G+ PD +V +
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224
Query: 320 LTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA--SLIEMYAKCSSIDNANKVFRGMAYK 377
+ LG L A LH V ++ + I SLI+MY KC +D A+ +F M +
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR 284
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+VV WSS+I Y +G EAL+ F QM ++PNK+TF+ +LSAC H GLVEEG T
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFG-VRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHH 497
F +M ++++L P HYG +VDLL R G+L A ++ MPM+ VWG L+G C
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Query: 498 NIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKV 551
+++M E A + L+P + G Y +L+N+Y + W + ++R L+K ++ K+
Sbjct: 404 DVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKI 457
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 150/297 (50%), Gaps = 7/297 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ +T PD +++ I +K+ V + +G+ +H + GD F S I LY K GE
Sbjct: 109 VRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEF 168
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+A +VF E P+ + W +I+ G +G A+ F M + PD T+VS ++
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGLEPDDFTMVSVTAS 227
Query: 121 CAQLSDSKLGRSIHGFVKRCGLD--THLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI 178
C L D L +H V + + + + + NSL+++YGK G + A +F EM ++V+
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
SWSSM+ YA NG AL+ F +M + + PN +T V L AC +EEG+ +
Sbjct: 288 SWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM 347
Query: 239 VSYGFELETTVS--TALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETG 292
S FELE +S ++D+ + + A + +P K +V+ W L GG + G
Sbjct: 348 KSE-FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 7/321 (2%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P LW +I+ Y R +P A+ + M V V PD +L A Q+ D LG+
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGM-VRSTVLPDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
+H R G + + LY K G ++A +F E P++ + SW++++ G
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS-- 250
A A+++F +M +EP+ T+VS +C L ++H+ + E ++ +
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
+L+DMY KC + A IF + +++VV+W+ + GYA G +++E F M GVR
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG--ASLIEMYAKCSSIDNAN 368
P+ + V +L+A G++++ A + KS F+ + ++++ ++ + A
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMM-KSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 369 KVFRGMAYK-DVVIWSSIIAA 388
KV M K +V++W ++
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGG 398
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 243/447 (54%), Gaps = 15/447 (3%)
Query: 160 GSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL 219
G + A +FR +P W++++ +A + + A + M+ + + + V AL
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 220 ------RACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
+ACA A ++H G ++ + T L+D Y K +A +F+ +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
P +DV +W L G A ++ME++ M ++G+R V +V L A S LG +++
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 334 -CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM-AYKDVVIWSSIIAAYGF 391
H + ++N + + I+MY+KC +D A +VF K VV W+++I +
Sbjct: 231 NIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 392 HGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
HG+ AL++F ++ ++ +KP+ V++++ L+AC HAGLVE G+++F+ M K + +
Sbjct: 286 HGEAHRALEIFDKLEDNG-IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNM 343
Query: 452 EHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFP 511
+HYG +VDLL R G L A DII +M M P +W +LLGA I+ +++M E+A++ +
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 512 LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDR 571
+ N+ G + LLSN+Y W + ++R ++ ++KK+ G S +E K +H F SD+
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Query: 572 FHDESDQIFEVLRKLDVKMREECYEHQ 598
H++ +I+E + ++ K+RE+ Y Q
Sbjct: 464 SHEQWREIYEKIDEIRFKIREDGYVAQ 490
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 15/354 (4%)
Query: 45 FVGSALIE--LYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
F+ S L+E S G+++ AV++F PKP W +I+ G+ S P LA +++ M
Sbjct: 36 FLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSML 95
Query: 103 VLEEVSP-----DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYG 157
S D +T ACA+ S +H + R GL L +LL+ Y
Sbjct: 96 QQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYS 155
Query: 158 KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
K G + SA LF EMP +DV SW++++A A+ A++L+ M + I + VT+V+
Sbjct: 156 KNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVA 215
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETT-VSTALMDMYLKCSSPENAVDIFNRIP-K 275
AL AC+ ++EG I +G+ + VS A +DMY KC + A +F + K
Sbjct: 216 ALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGK 270
Query: 276 KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
K VV W + G+A G AH+++E+F + +G++PD V+ + LTA G+++ + +
Sbjct: 271 KSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSV 330
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAA 388
+ G + N ++++ ++ + A+ + M+ D V+W S++ A
Sbjct: 331 FNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 16/300 (5%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
A R D+ T S LK+C +H + + L D + + L++ YSK G++
Sbjct: 103 AICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLIS 162
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A ++F E P DV W +++ G A+ + RM E + VT+V+A AC+
Sbjct: 163 AYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMET-EGIRRSEVTVVAALGACS 221
Query: 123 QLSDSKLGRSI-HGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISW 180
L D K G +I HG+ + ++ ++N+ +++Y K G + A +F + K V++W
Sbjct: 222 HLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTW 276
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++M+ +A +G A AL++F+++ D I+P+ V+ ++AL AC A +E G +
Sbjct: 277 NTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC 336
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIF---NRIPKKDVVAWAVLFGG---YAETGMA 294
G E ++D+ + A DI + IP D V W L G Y++ MA
Sbjct: 337 KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP--DPVLWQSLLGASEIYSDVEMA 394
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 195/356 (54%), Gaps = 1/356 (0%)
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
L SA+R+C G H LA+ GF + + ++L+ +Y ENA +F +P
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
+++VV+W + G+A+ ++++ M P+ +L+A + G L Q
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ 394
+H G + +I SLI MY KC + +A ++F + KDVV W+S+IA Y HG
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 395 GEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHY 454
+A++LF M S KP+ +T++ +LS+C HAGLV+EG F++M ++ L P+ HY
Sbjct: 303 AMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHY 361
Query: 455 GIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDP 514
+VDLLGR G L AL++I NMPM+ +WG+LL +C +H ++ G AA+ L+P
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEP 421
Query: 515 NHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD 570
+ A + L+N+Y W AA +R L+K+ LK G S +E+ N V F A D
Sbjct: 422 DCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 183/358 (51%), Gaps = 18/358 (5%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVF 67
D++ +S A++SC + G H K D+++GS+L+ LY GE+ +A +VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 68 MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS 127
E P+ +VV WT++++G+ + ++ L +S+M P+ T + SAC
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK-STSDPNDYTFTALLSACTGSGAL 237
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
GRS+H GL ++L ++NSL+++Y K G +K A +F + +KDV+SW+SM+A Y
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 188 ADNGAATNALDLFNEMIDKR-IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
A +G A A++LF M+ K +P+ +T + L +C A ++EGRK L +G + E
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAW-AVLFG----GYAETGMAHKSMEV 300
+ L+D+ + + A+++ +P K + V W ++LF G TG+ +
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 301 FCNMLSDGVRPDAVAL-VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+ PD A V++ + +G ++A + + G N G S IE+
Sbjct: 418 M-------LEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNP--GCSWIEI 466
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 170/340 (50%), Gaps = 6/340 (1%)
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
S D L SA +C D + G H + G + + L +SL+ LY +G +++A
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYK 176
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
+F EMP+++V+SW++M++ +A L L+++M +PN T + L AC +
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
L +GR +H + G + +S +L+ MY KC ++A IF++ KDVV+W + G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 288 YAETGMAHKSMEVFCNML-SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
YA+ G+A +++E+F M+ G +PDA+ + +L++ G++++ + + G
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQGEEALKLFYQM 405
+ L+++ + + A ++ M K + VIW S++ + HG ++
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR---AA 413
Query: 406 ANHSDLKPN-KVTFISILSACSHAGLVEEGITIFDIMVNK 444
L+P+ T + + + + G +E T+ +M +K
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDK 453
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 4/258 (1%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+T+ P+ +T + L +C G L GR +H L + + ++LI +Y KCG++ D
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A +F ++ DVV W S++ GY + G A+ F M PD +T + S+C
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWS 181
K GR + GL L+ + L++L G+ G ++ A L MP K + + W
Sbjct: 335 HAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPNW-VTLVSALRACASASYLEEGRKIHQLAVS 240
S+L +G + E + +EP+ T V AS Y +E + +L
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERL--MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKD 452
Query: 241 YGFELETTVSTALMDMYL 258
G + S ++ Y+
Sbjct: 453 KGLKTNPGCSWIEINNYV 470
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 251/500 (50%), Gaps = 35/500 (7%)
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS-IKSAEILFREMPDKDVISW 180
Q S + + IH + + GL + A+ +L + S + A ++F + K+ W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 181 SSMLACYADNGAATNALDLFNEMI--DKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
++++ ++ + A+ +F +M+ ++P +T S +A +GR++H +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 239 VSYGFELETTVSTALMDMYL-------------------------------KCSSPENAV 267
+ G E ++ + ++ MY+ KC + A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 268 DIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELG 327
++F+ +P+++ V+W + G+ G ++++F M V+PD +V +L A + LG
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
+Q +H ++ ++ F+ N + +LI+MY KC I+ VF K + W+S+I
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
+G E A+ LF ++ S L+P+ V+FI +L+AC+H+G V F +M KY +
Sbjct: 333 GLANNGFEERAMDLFSEL-ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAK 507
P +HY +MV++LG G L+ A +I NMP++ +W +LL AC N++M + AAK
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFV 567
L LDP+ Y LLSN Y + A + R L+KE +++K +G S +E+ EVH F+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 568 ASDRFHDESDQIFEVLRKLD 587
+ H +S +I+ +L L+
Sbjct: 512 SCGGTHPKSAEIYSLLDILN 531
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 210/443 (47%), Gaps = 39/443 (8%)
Query: 29 RMIHGFLKKENLDGDMFVGSALIELY-SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYER 87
+ IH L K L D S ++ + +MN A VF + +W +I+ G+ R
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 88 SGTPELALAFFSRMAVLE-EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHL 146
S PE+A++ F M V P +T S A +L ++ GR +HG V + GL+
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 147 SLANSLLNLY-------------------------------GKTGSIKSAEILFREMPDK 175
+ N++L++Y K G I A+ LF EMP +
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
+ +SW+SM++ + NG +ALD+F EM +K ++P+ T+VS L ACA E+GR IH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH 295
+ V FEL + V TAL+DMY KC E +++F PKK + W + G A G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 296 KSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL- 354
++M++F + G+ PD+V+ + +LTA + G + +A + + +L
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 355 IEMYAKCSSIDNANKVFRGMAY-KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKP 413
+ + ++ A + + M +D VIWSS+++A G E A + + L P
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK---LDP 458
Query: 414 NKVTFISILS-ACSHAGLVEEGI 435
++ +LS A + GL EE +
Sbjct: 459 DETCGYVLLSNAYASYGLFEEAV 481
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 39/365 (10%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
+ +P T K+ L + GR +HG + KE L+ D F+ + ++ +Y CG + +A
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVL------------------- 104
+F+ DVV W S++ G+ + G + A F M
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 105 -----------EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
++V PD T+VS +ACA L S+ GR IH ++ R + + + +L+
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 154 NLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
++Y K G I+ +F P K + W+SM+ A+NG A+DLF+E+ +EP+ V
Sbjct: 301 DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV 360
Query: 214 TLVSALRACASASYLEEGRKIHQL-AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
+ + L ACA + + + +L Y E T ++++ E A +
Sbjct: 361 SFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN 420
Query: 273 IP-KKDVVAWAVLFGGYAETG---MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
+P ++D V W+ L + G MA ++ + + D + V + A + G+
Sbjct: 421 MPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD----ETCGYVLLSNAYASYGL 476
Query: 329 LQQAV 333
++AV
Sbjct: 477 FEEAV 481
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD T+ L +C L E GR IH ++ + + + V +ALI++Y KCG + + +
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF PK + W S++ G +G E A+ FS + + PD V+ + +ACA
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSG 373
Query: 126 DSKLGRSIHGFVK-RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ +K + ++ + ++N+ G G ++ AE L + MP ++D + WSS+
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY--LEEGRKIHQLAVSY 241
L+ G A + K+++P+ T L + A ASY EE + L
Sbjct: 434 LSACRKIGNVEMAKRAAKCL--KKLDPD-ETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 242 GFELETTVSTALMDM----YLKC--SSPENAVDIFNRIPKKDVVAWAV--LFGGYAE 290
E E S+ +D ++ C + P++A +I++ + D++ W V + G+AE
Sbjct: 491 QMEKEVGCSSIEVDFEVHEFISCGGTHPKSA-EIYSLL---DILNWDVSTIKSGFAE 543
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 259/557 (46%), Gaps = 89/557 (15%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P SH V+ L++C ++ + G+ IH K L G ++V + L+ L
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGL------------- 148
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
Y R G ELA F +A VS
Sbjct: 149 ------------------YSRLGYIELAKKAFDDIAEKNTVS------------------ 172
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
NSLL+ Y ++G + A +F ++P+KD +SW+ +++
Sbjct: 173 ----------------------WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA G NA LF+ M K +W L+ C +LA +Y +
Sbjct: 211 YAKKGDMGNACSLFSAMPLKS-PASWNILIGGYVNCREM----------KLARTYFDAMP 259
Query: 247 TTVSTALMDM---YLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ + M Y K ++A ++F + KKD + + + Y + G ++++F
Sbjct: 260 QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 304 MLSDG--VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
ML ++PD + L +++A S+LG + +++T+ G ++ + SLI++Y K
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKG 379
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISI 421
A K+F + KD V +S++I G +G EA LF M + PN VTF +
Sbjct: 380 GDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMI-EKKIPPNVVTFTGL 438
Query: 422 LSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
LSA SH+GLV+EG F+ M + + L P ++HYGIMVD+LGR G L+ A ++I +MPMQ
Sbjct: 439 LSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 497
Query: 482 GPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRS 541
VWGALL A +H+N++ GE+A + L+ + GY + L+ IY W +A +R
Sbjct: 498 NAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRD 557
Query: 542 LIKENRLKKVLGQSMVE 558
IKE +L K LG S VE
Sbjct: 558 SIKEKKLCKTLGCSWVE 574
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 33/330 (10%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
D SW ++ + + +D++ +M + I P+ + S LRAC + +G+ IH
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAH 295
A+ G V T L+ +Y + E A F+ I +K+ V+W L GY E+G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 296 KSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL-HAFVTKSGFDNNEYIGA-- 352
++ VF + DAV+ I+++ ++ G + A L A KS N IG
Sbjct: 188 EARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 353 ------------------------SLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
++I Y K + +A ++FR M+ KD +++ ++IA
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 389 YGFHGQGEEALKLFYQM-ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
Y +G+ ++ALKLF QM +S ++P+++T S++SA S G G T + + ++ +
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGI 362
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNM 477
D ++DL + G+ +A + +N+
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNL 392
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 278/573 (48%), Gaps = 64/573 (11%)
Query: 30 MIHGFLKKENLD------GDM-----FVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLW 78
MI G+++ + ++ GDM ++++ Y + G++ +A +F E P+ ++V W
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSW 265
Query: 79 TSIVTGYERSGTPELALAFFSRMAV-LEEVSPDPVTLVSAASACAQLSDS--KLGRSIHG 135
T++++G+ + AL F M ++ VSP+ TL+S A AC L +LG +H
Sbjct: 266 TAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHA 325
Query: 136 FVKRCGLDT---HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGA 192
V G +T LA SL+++Y +G I SA+ L E D+ S + ++ Y NG
Sbjct: 326 QVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGD 383
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
A LF E + +H VS+ T+
Sbjct: 384 LERAETLF----------------------------ERVKSLHD-KVSW---------TS 405
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
++D YL+ A +F ++ KD V W V+ G + + ++ + +M+ G++P
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSG--FDNNEYIGASLIEMYAKCSSIDNANKV 370
+L++ L Q +H + K+ +D + + SL+ MYAKC +I++A ++
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 371 FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
F M KD V W+S+I HG ++AL LF +M + S KPN VTF+ +LSACSH+GL
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD-SGKKPNSVTFLGVLSACSHSGL 584
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
+ G+ +F M Y + P +HY M+DLLGR G+L A + I+ +P V+GALL
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 491 GACHIHHNIK----MGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
G C ++ K + E AA L LDP +A + L N+Y ++R +
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK 704
Query: 547 RLKKVLGQSMVELKNEVHSFVASDRFHDESDQI 579
+KK G S V + + F++ D+ E+ Q+
Sbjct: 705 GVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 177/463 (38%), Gaps = 123/463 (26%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEV 107
+A++ Y KC MN+A +F E PK +VV WT ++T G E A+ F M V
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
S N+L+ + G ++ A+
Sbjct: 171 S----------------------------------------WNTLVTGLIRNGDMEKAKQ 190
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY 227
+F MP +DV+SW++M+ Y +N A LF +M +K + W ++V
Sbjct: 191 VFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV-VTWTSMV----------- 238
Query: 228 LEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGG 287
YG Y + A +F +P++++V+W + G
Sbjct: 239 -------------YG--------------YCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 288 YAETGMAHKSMEVFCNMLS--DGVRPDAVALVKILTAISELGVLQQAVC--LHAFVTKSG 343
+A + +++ +F M D V P+ L+ + A LGV + + LHA V +G
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 344 F---DNNEYIGASLIEMYA-----------------------------KCSSIDNANKVF 371
+ D++ + SL+ MYA K ++ A +F
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLF 391
Query: 372 -RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
R + D V W+S+I Y G A LF ++ + + VT+ ++S L
Sbjct: 392 ERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK-----DGVTWTVMISGLVQNEL 446
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDI 473
E ++ MV + L P + Y +++ G LD+ I
Sbjct: 447 FAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKEN--LDGDMFVGSALIELYSKCGEMNDA 63
+P + T S+ L S L+ G+ IH + K D D+ + ++L+ +Y+KCG + DA
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
E+F + + D V W S++ G G + AL F M + P+ VT + SAC+
Sbjct: 523 YEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM-LDSGKKPNSVTFLGVLSACSH 581
Query: 124 LSDSKLGRSIHGFVKRC-----GLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
G + +K G+D ++ S+++L G+ G +K AE +P
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFISALP 632
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 212 WVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKC----------- 260
W +L+S A YL+E R + ++ E A++ Y+KC
Sbjct: 80 WTSLLSKY---AKTGYLDEARVLFEVMP----ERNIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 261 -------------------SSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
E+AV++F+ +P+++VV+W L G G K+ +VF
Sbjct: 133 EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M S D V+ ++ E +++A L ++ + N S++ Y +
Sbjct: 193 DAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRY 244
Query: 362 SSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD-LKPNKVTFIS 420
+ A ++F M +++V W+++I+ + ++ EAL LF +M D + PN T IS
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 421 ILSACSHAGL 430
+ AC G+
Sbjct: 305 LAYACGGLGV 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
T+L+ Y K + A +F +P++++V + GY + +++ +F M
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----P 135
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
+ V+ +LTA+ + G + AV L + + N +L+ + ++ A +V
Sbjct: 136 KNVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 371 FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
F M +DVV W+++I Y + EEA LF M+ + N VT+ S++ G
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS-----EKNVVTWTSMVYGYCRYGD 246
Query: 431 VEEGITIF 438
V E +F
Sbjct: 247 VREAYRLF 254
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 217/418 (51%), Gaps = 20/418 (4%)
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE----EGRKIHQLAV 239
L Y ++G AL F R P++V S L A +S + +GR+IH L
Sbjct: 35 LKQYLESGEPIKALLDFRHRF--RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVR 92
Query: 240 SYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGGYAETGMAHKSM 298
GF + T+L+ Y + A +F+ P K+++V W + Y E + +++
Sbjct: 93 KLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAI 152
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQ--QAVCLHAFVTKSGFDNNEYIGASLIE 356
E+F M ++ + D V + L+A ++LG +Q + + + K + + SL+
Sbjct: 153 ELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLN 212
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQM-----ANHSDL 411
MY K + A K+F KDV ++S+I Y +GQ +E+L+LF +M + + +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 412 KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
PN VTFI +L ACSH+GLVEEG F M+ Y L P H+G MVDL R G L A
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 472 DIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDK 531
+ IN MP++ +W LLGAC +H N+++GE + +F LD +H G Y LSNIY
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 532 NWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDES---DQIFEVLRKL 586
W +K+R +++ R+ G+S +EL + ++ FV+ +DE +I EVLR L
Sbjct: 393 MWDEKSKMRDRVRKRRMP---GKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCL 447
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 8 DSHTVSIALKSCVGLQKLEV-GRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
DS +V A+K + + GR IH ++K + + + ++L+ YS G+++ A +V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 67 FMEYP-KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
F E P K ++VLWT++++ Y + A+ F RM E++ D V + A SACA L
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA-EKIELDGVIVTVALSACADLG 181
Query: 126 DSKLGRSIHG--FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
++G I+ ++ L L+L NSLLN+Y K+G + A LF E KDV +++SM
Sbjct: 182 AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSM 241
Query: 184 LACYADNGAATNALDLFNEM--IDKR----IEPNWVTLVSALRACASASYLEEG-RKIHQ 236
+ YA NG A +L+LF +M ID+ I PN VT + L AC+ + +EEG R
Sbjct: 242 IFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKS 301
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
+ + Y + ++D++ + ++A + N++P K + V W L G
Sbjct: 302 MIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 259/537 (48%), Gaps = 37/537 (6%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
R + + LKSC + L + R +H + K G++ + ++++++Y KC M+DA
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF E P V W IV Y G + A+ F +M L V P T+ S AC++
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSL 277
Query: 126 DSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLA 185
++G+ IH + + ++ S+ ++Y K ++SA +F + KD+ SW+S ++
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNW--------------------------------V 213
YA +G A +LF+ M ++ I +W V
Sbjct: 338 GYAMSGLTREARELFDLMPERNI-VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
TLV L C+ S ++ G++ H +G++ V+ AL+DMY KC + ++A F ++
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 274 PK-KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA 332
+ +D V+W L G A G + +++ F M + +P L +L + + L
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG 515
Query: 333 VCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFH 392
+H F+ + G+ + I ++++MY+KC D A +VF+ A +D+++W+SII +
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G+ +E +LF + N +KP+ VTF+ IL AC G VE G F M KY + P E
Sbjct: 576 GRSKEVFELFMLLENEG-VKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVE 634
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
HY M++L + G L + + + MP + + AC + K+G AAK L
Sbjct: 635 HYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 233/483 (48%), Gaps = 39/483 (8%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+F+ + IE Y KCG ++DA E+F E P+ D W +++T ++G + F RM
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMN- 154
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
+ V + +C + D +L R +H V + G ++ L S++++YGK +
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 164 SAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA 223
A +F E+ + +SW+ ++ Y + G A+ +F +M++ + P T+ S + AC+
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 224 SASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAV 283
+ LE G+ IH +AV +T VST++ DMY+KC E+A +F++ KD+ +W
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDGV-------------------------------RPD 312
GYA +G+ ++ E+F M + D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
V LV IL S + +Q H F+ + G+D N + +L++MY KC ++ +AN FR
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 373 GMA-YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
M+ +D V W++++ G+ E+AL F M + KP+K T ++L+ C++ +
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGM--QVEAKPSKYTLATLLAGCANIPAL 512
Query: 432 EEGITIFDIMV-NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALL 490
G I ++ + Y++ D G MVD+ + D A+++ + +W +++
Sbjct: 513 NLGKAIHGFLIRDGYKI--DVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSII 569
Query: 491 GAC 493
C
Sbjct: 570 RGC 572
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 32/353 (9%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ RP +HTVS + +C LEVG++IH K ++ D V +++ ++Y KC +
Sbjct: 255 LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRL 314
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVS------------ 108
A VF + D+ WTS ++GY SG A F M VS
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAH 374
Query: 109 ------------------PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
D VTLV + C+ +SD ++G+ HGF+ R G DT++ +AN
Sbjct: 375 EWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVAN 434
Query: 151 SLLNLYGKTGSIKSAEILFREMPD-KDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
+LL++YGK G+++SA I FR+M + +D +SW+++L A G + AL F E + +
Sbjct: 435 ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAK 493
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
P+ TL + L CA+ L G+ IH + G++++ + A++DMY KC + A+++
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 270 FNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTA 322
F +D++ W + G G + + E+F + ++GV+PD V + IL A
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
M A+P +T++ L C + L +G+ IHGFL ++ D+ + A++++YSKC
Sbjct: 488 MQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
+ A+EVF E D++LW SI+ G R+G + F + E V PD VT + A
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN-EGVKPDHVTFLGILQA 606
Query: 121 CAQLSDSKLG-RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
C + +LG + + + + + ++ LY K G + E MP
Sbjct: 607 CIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 210/385 (54%), Gaps = 12/385 (3%)
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
V+ V+A R C + SYL + L++S G + +LM K A +
Sbjct: 69 VSTVAAYRRC-NRSYLARRLLLWFLSLSPGVCNINLIIESLM----KIGESGLAKKVLRN 123
Query: 273 IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGVLQQ 331
++V+ W ++ GGY ++++ NMLS ++P+ + L A + LG L
Sbjct: 124 ASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHH 183
Query: 332 AVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGF 391
A +H+ + SG + N + ++L+++YAKC I + +VF + DV IW+++I +
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 392 HGQGEEALKLFYQM-ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPD 450
HG EA+++F +M A H + P+ +TF+ +L+ CSH GL+EEG F +M ++ + P
Sbjct: 244 HGLATEAIRVFSEMEAEH--VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPK 301
Query: 451 SEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF 510
EHYG MVDLLGR G + A ++I +MP++ +W +LL + + N ++GE+A +N
Sbjct: 302 LEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQN-- 359
Query: 511 PLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASD 570
L +G Y LLSNIY K W +A K+R L+ + ++K G+S +E +H F A D
Sbjct: 360 -LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGD 418
Query: 571 RFHDESDQIFEVLRKLDVKMREECY 595
H E+ I++VL L K + + +
Sbjct: 419 TSHIETKAIYKVLEGLIQKTKSQGF 443
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 111 PVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFR 170
P LVS +A + + S L R + + L + N ++ K G A+ + R
Sbjct: 65 PSLLVSTVAAYRRCNRSYLARRL--LLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLR 122
Query: 171 EMPDKDVISWSSMLACYADNGAATNALDLFNEMID-KRIEPNWVTLVSALRACASASYLE 229
D++VI+W+ M+ Y N AL M+ I+PN + S+L ACA L
Sbjct: 123 NASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLH 182
Query: 230 EGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYA 289
+ +H L + G EL +S+AL+D+Y KC + ++F + + DV W + G+A
Sbjct: 183 HAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFA 242
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK--SGFDNN 347
G+A +++ VF M ++ V PD++ + +LT S G+L++ +++ S
Sbjct: 243 THGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKL 302
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAA 388
E+ GA ++++ + + A ++ M + DVVIW S++++
Sbjct: 303 EHYGA-MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP 109
+IE K GE A +V +V+ W ++ GY R+ E AL M ++ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
+ + S+ +ACA+L D + +H + G++ + L+++L+++Y K G I ++ +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 170 REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE 229
+ DV W++M+ +A +G AT A+ +F+EM + + P+ +T + L C+ LE
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 230 EGRKIHQLAVSYGFELETTVS--TALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
EG++ L +S F ++ + A++D+ + + A ++ +P + DVV W L
Sbjct: 284 EGKEYFGL-MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ + + +L +C L L + +H + ++ + + SAL+++Y+KCG++ + E
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + DV +W +++TG+ G A+ FS M E VSPD +T + + C+
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA-EHVSPDSITFLGLLTTCSHCG 280
Query: 126 DSKLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSM 183
+ G+ G + +R + L ++++L G+ G +K A L MP + DV+ W S+
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 184 LA 185
L+
Sbjct: 341 LS 342
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 214/417 (51%), Gaps = 3/417 (0%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDV 75
L C + E+GR +HG + K + G++ V S+L+ Y++CGE+ A+ F + DV
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 76 VLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHG 135
+ WT++++ R G A+ F M + P+ T+ S AC++ + GR +H
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
V + + T + + SL+++Y K G I +F M +++ ++W+S++A +A G
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMD 255
A+ LF M + + N +T+VS LRAC S L G+++H + E + + L+
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 256 MYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
+Y KC +A ++ ++P +DVV+W + G + G ++++ M+ +GV P+
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA 375
L A + L +H+ K+ +N ++G++LI MYAKC + A +VF M
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
K++V W ++I Y +G EALKL Y+M + + F +ILS C L E
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG-FEVDDYIFATILSTCGDIELDE 604
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 236/475 (49%), Gaps = 6/475 (1%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
+ R D ++ L+S G++ + + IH K D ++ G+ LI + G++ A
Sbjct: 80 SERVDYALLAEWLQSSNGMRLI---KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYA 136
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+VF P+ + V WT+++ GY + G + A A F + V + C++
Sbjct: 137 RKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR 196
Query: 124 LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
++ +LGR +HG + + G+ +L + +SL+ Y + G + SA F M +KDVISW+++
Sbjct: 197 RAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 184 LACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
++ + G A+ +F M++ PN T+ S L+AC+ L GR++H L V
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMI 315
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+ + V T+LMDMY KC + +F+ + ++ V W + +A G +++ +F
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M + + + +V IL A +G L LHA + K+ + N YIG++L+ +Y KC
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
+A V + + +DVV W+++I+ G EAL +M ++PN T+ S L
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALK 494
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
AC+++ + G +I I K + + ++ + + G + A + ++MP
Sbjct: 495 ACANSESLLIGRSIHSI-AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 178/320 (55%), Gaps = 1/320 (0%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ TV LK+C + L GR +H + K + D+FVG++L+++Y+KCGE++D +V
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + V WTSI+ + R G E A++ F R+ + + +T+VS AC +
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
LG+ +H + + ++ ++ + ++L+ LY K G + A + +++P +DV+SW++M++
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ G + ALD EMI + +EPN T SAL+ACA++ L GR IH +A
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V +AL+ MY KC A +F+ +P+K++V+W + GYA G +++++ M +
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 307 DGVRPDAVALVKILTAISEL 326
+G D IL+ ++
Sbjct: 581 EGFEVDDYIFATILSTCGDI 600
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 5/367 (1%)
Query: 128 KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACY 187
+L + IH +C D + N+L++ + G + A +F MP+K+ ++W++M+ Y
Sbjct: 99 RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 188 ADNGAATNALDLFNEMIDKRIE-PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
G A LF + + I N V L C+ + E GR++H V G
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-N 217
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
V ++L+ Y +C +A+ F+ + +KDV++W + + G K++ +F ML+
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
P+ + IL A SE L+ +H+ V K + ++G SL++MYAKC I +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
KVF GM+ ++ V W+SIIAA+ G GEEA+ LF ++ L N +T +SIL AC
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACG 396
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVW 486
G + G + ++ K + + +V L + GE A +++ +P + W
Sbjct: 397 SVGALLLGKELHAQII-KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-W 454
Query: 487 GALLGAC 493
A++ C
Sbjct: 455 TAMISGC 461
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
D R D L + L + + + ++++ +HA K D Y G +LI + +
Sbjct: 79 DSERVDYALLAEWLQSSNGMRLIKR---IHAMALKCFDDQVIYFGNNLISSCVRLGDLVY 135
Query: 367 ANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
A KVF M K+ V W+++I Y +G +EA LF H N+ F+ +L+ CS
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 427 HAGLVEEGITIFDIMVN--KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH 484
E G + MV L+ +S +V + GEL AL + M +
Sbjct: 196 RRAEFELGRQVHGNMVKVGVGNLIVESS----LVYFYAQCGELTSALRAFDMME-EKDVI 250
Query: 485 VWGALLGACHIH-HNIK 500
W A++ AC H IK
Sbjct: 251 SWTAVISACSRKGHGIK 267
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 240/488 (49%), Gaps = 38/488 (7%)
Query: 133 IHGFVKRCGLDTHLSLANSLLNL--YGKTGSIKSAEILFREMPDKDVISWSSMLACYADN 190
IH + GL + L+ +G + A ++ D W+ ++ ++++
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
++ ++ +M+ + P+ +T +++ + S + G +H V G E + +
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 146
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKK-------------------------------DVV 279
L+ MY +A +F+ +P K DVV
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 280 AWAVLFGGYAETGMAHKSMEVFCNMLSDGV-RPDAVALVKILTAISELGVLQQAVCLHAF 338
W+ + GY + G +K++E+F M+ G + + V +V ++ A + LG L + +H +
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 339 VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK--DVVIWSSIIAAYGFHGQGE 396
+ + SLI+MYAKC SI +A VF + K D ++W++II HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI 456
E+L+LF++M S + P+++TF+ +L+ACSH GLV+E F + + P SEHY
Sbjct: 327 ESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYAC 384
Query: 457 MVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNH 516
MVD+L R G + A D I+ MP++ + GALL C H N+++ E K L L P++
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 517 AGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDES 576
G Y L+N+Y ++K + A +R +++ +KK+ G S+++L H F+A D+ H S
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 577 DQIFEVLR 584
D+I+ VL+
Sbjct: 505 DKIYAVLQ 512
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 35/357 (9%)
Query: 55 SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
S G+++ A + + P W ++ G+ S PE +++ + +M + PD +T
Sbjct: 53 SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG-LLPDHMTY 111
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+ ++LS+ KLG S+H V + GL+ L + N+L+++YG SA LF EMP
Sbjct: 112 PFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH 171
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRI-------------------------- 208
K++++W+S+L YA +G +A +F+EM ++ +
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 231
Query: 209 ------EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSS 262
+ N VT+VS + ACA L G+ +H+ + L + T+L+DMY KC S
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 263 PENAVDIFNR--IPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
+A +F R + + D + W + GG A G +S+++F M + PD + + +L
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 321 TAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
A S G++++A + +SG + A ++++ ++ + +A+ M K
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 41/307 (13%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELY------------ 54
PD T +KS L ++G +H + K L+ D+F+ + LI +Y
Sbjct: 106 PDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKL 165
Query: 55 -------------------SKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELAL 95
+K G++ A VF E + DVV W+S++ GY + G AL
Sbjct: 166 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 96 AFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA----NS 151
F +M + + VT+VS ACA L G+++H ++ LD HL L S
Sbjct: 226 EIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYI----LDVHLPLTVILQTS 281
Query: 152 LLNLYGKTGSIKSA-EILFR-EMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
L+++Y K GSI A + +R + + D + W++++ A +G +L LF++M + +I+
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
P+ +T + L AC+ ++E + G E ++ ++D+ + ++A D
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 270 FNRIPKK 276
+ +P K
Sbjct: 402 ISEMPIK 408
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 228 LEEGRKIHQLAVSYGF-ELETTVSTALMDMYLKCSSP-ENAVDIFNRIPKKDVVAWAVLF 285
+ E KIH L ++ G E E VS L L S + A +++ W +
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVI 80
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
G++ + KS+ V+ ML G+ PD + ++ + S L + LH V KSG +
Sbjct: 81 RGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE 140
Query: 346 NNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY---------------- 389
+ +I +LI MY +A K+F M +K++V W+SI+ AY
Sbjct: 141 WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 390 -------------GFHGQGE--EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
G+ +GE +AL++F QM K N+VT +S++ AC+H G + G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 435 IT----IFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM-QAGPHVWGAL 489
T I D+ + ++ S ++D+ + G + A + + + +W A+
Sbjct: 261 KTVHRYILDVHLPLTVILQTS-----LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 490 LGACHIHHNIKMGEVAAKNLF------PLDPNHAGYYTLL---SNIYCVDKNWHNAAKLR 540
+G H I+ + LF +DP+ + LL S+ V + WH L+
Sbjct: 316 IGGLASHGFIR----ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 3 ATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMND 62
+++ + T+ + +C L L G+ +H ++ +L + + ++LI++Y+KCG + D
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 63 AVEVFME--YPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A VF + D ++W +I+ G G +L F +M ++ PD +T + +A
Sbjct: 295 AWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE-SKIDPDEITFLCLLAA 353
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISW 180
C+ K +K G + ++++ + G +K A EMP K
Sbjct: 354 CSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT--- 410
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIE 209
SML + L+L + K IE
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLIE 439
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 207/419 (49%), Gaps = 35/419 (8%)
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS-ALRACASASYLEEGRKIH 235
+IS + L+ YA+ G AL+LF +M P + S AL++CA+A G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGM-- 293
+V F V AL+DMY KC S +A +F+ IP+++ V W + Y G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 294 -------------------------------AHKSMEVFCNMLSDGVRPDAVALVKILTA 322
+++++E + M+ +P+ + L+ +++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 323 ISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIW 382
S +G + +H++ ++ + + + + L+E Y +C SI VF M +DVV W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
SS+I+AY HG E ALK F +M + + P+ + F+++L ACSHAGL +E + F M
Sbjct: 252 SSLISAYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMG 502
Y L +HY +VD+L R+G + A +I MP + WGALLGAC + I++
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 503 EVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKN 561
E+AA+ L ++P + Y LL IY A +LR +KE+ +K G S K+
Sbjct: 371 EIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLFKD 429
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 161/333 (48%), Gaps = 39/333 (11%)
Query: 1 MHAT-ARP-DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG 58
MH++ A P D+H S+ALKSC + +G +H K N + FVG AL+++Y KC
Sbjct: 38 MHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCL 97
Query: 59 EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVS---------- 108
++ A ++F E P+ + V+W ++++ Y G + A+ + M V+ S
Sbjct: 98 SVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLV 157
Query: 109 ----------------------PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHL 146
P+ +TL++ SAC+ + +L + IH + R ++ H
Sbjct: 158 GTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP 217
Query: 147 SLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK 206
L + L+ YG+ GSI +++F M D+DV++WSS+++ YA +G A +AL F EM
Sbjct: 218 QLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELA 277
Query: 207 RIEPNWVTLVSALRACASASYLEEGR-KIHQLAVSYGFELETTVSTALMDMYLKCSSPEN 265
++ P+ + ++ L+AC+ A +E ++ YG + L+D+ + E
Sbjct: 278 KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEE 337
Query: 266 AVDIFNRIPKKDVV-AWAVLFGG---YAETGMA 294
A + +P+K W L G Y E +A
Sbjct: 338 AYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 35/355 (9%)
Query: 79 TSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVK 138
T ++ Y G E AL F +M + D A +CA LG S+H
Sbjct: 16 TKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSV 75
Query: 139 RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALD 198
+ ++ + +LL++YGK S+ A LF E+P ++ + W++M++ Y G A++
Sbjct: 76 KSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVE 135
Query: 199 L---------------------------------FNEMIDKRIEPNWVTLVSALRACASA 225
L + +MI+ R +PN +TL++ + AC++
Sbjct: 136 LYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
++IH A E + + L++ Y +C S +F+ + +DVVAW+ L
Sbjct: 196 GAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQA-VCLHAFVTKSGF 344
YA G A +++ F M V PD +A + +L A S G+ +A V G
Sbjct: 256 SAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGL 315
Query: 345 DNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV-IWSSIIAAYGFHGQGEEA 398
++ + L+++ ++ + A KV + M K W +++ A +G+ E A
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 218/435 (50%), Gaps = 40/435 (9%)
Query: 162 IKSAEILFREMPDKDVISWSSMLA-CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
+ A +FR + + +++++ C ++ ++ F EM + + P++ T +
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 221 ACASASY--LEEGRKIHQLAVSYG-----FELETTVST---------------------- 251
ACA+ L + +H A+ +G F L T +
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 252 ----ALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
L+D +K A ++F+ +P +D+V+W L GYA+ +++++F M++
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL 243
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
G++PD VA+V L+A ++ G Q+ +H + + + ++ L++ YAKC ID A
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 368 NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSH 427
++F + K + W+++I HG GE + F +M + S +KP+ VTFIS+L CSH
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS-SGIKPDGVTFISVLVGCSH 362
Query: 428 AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPH--- 484
+GLV+E +FD M + Y + + +HYG M DLLGR G ++ A ++I MP G
Sbjct: 363 SGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKL 422
Query: 485 -VWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLI 543
W LLG C IH NI++ E AA + L P G Y ++ +Y + W K+R +I
Sbjct: 423 LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREII 482
Query: 544 -KENRLKKVLGQSMV 557
++ ++KK +G S V
Sbjct: 483 DRDKKVKKNVGFSKV 497
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 48/422 (11%)
Query: 23 QKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM-NDAVEVFMEYPKPDVVLWTSI 81
Q + GR+ + F + +F +++ S E+ + A VF P + +I
Sbjct: 26 QFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTI 85
Query: 82 V---TGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA--QLSDSKLGRSIHGF 136
+ T +E S + FF M V PD T ACA + D L +++H
Sbjct: 86 IRICTLHEPSSLS--SKRFFVEMR-RRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQ 142
Query: 137 VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFRE------------------------- 171
R GL + L N+L+ +Y I SA LF E
Sbjct: 143 ALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRA 202
Query: 172 ------MPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
MP +D++SW+S+++ YA A+ LF+EM+ ++P+ V +VS L ACA +
Sbjct: 203 RELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQS 262
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
++G+ IH +++ ++T L+D Y KC + A++IF K + W +
Sbjct: 263 GDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMI 322
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFD 345
G A G +++ F M+S G++PD V + +L S G++ +A L + +S +D
Sbjct: 323 TGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM-RSLYD 381
Query: 346 NNEYIG--ASLIEMYAKCSSIDNANKVFRGMA-----YKDVVIWSSIIAAYGFHGQGEEA 398
N + + ++ + I+ A ++ M + ++ WS ++ HG E A
Sbjct: 382 VNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Query: 399 LK 400
K
Sbjct: 442 EK 443
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD+ + L +C + G+ IH + K++ L D F+ + L++ Y+KCG ++ A+E
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
+F + W +++TG G EL + +F +M V + PD VT +S C+
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM-VSSGIKPDGVTFISVLVGCSHSG 364
Query: 126 DSKLGRSIHGFVKRC-GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD-----KDVIS 179
R++ ++ ++ + + +L G+ G I+ A + +MP + +++
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 180 WSSMLA 185
WS +L
Sbjct: 425 WSGLLG 430
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 213/414 (51%), Gaps = 37/414 (8%)
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
+++++ Y G +L LF M+ ++PN +T S ++A S+ + G +H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 240 SYGFELETTVSTALMDMY---------------------LKCSS----------PENAVD 268
GF + V T+ + Y + C+S + A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG---VRPDAVALVKILTAISE 325
F R+P DVV+W + G+++ G+ K++ VF M+ + + P+ V +L++ +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 326 L--GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWS 383
G ++ +H +V +G +L++MY K ++ A +F + K V W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 384 SIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVN 443
+II+A +G+ ++AL++F +M S + PN +T ++IL+AC+ + LV+ GI +F + +
Sbjct: 294 AIISALASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGE 503
+Y+++P SEHYG +VDL+GR G L A + I ++P + V GALLGAC IH N ++G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 504 VAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
K L L P H G Y LS +D NW A K+R + E ++K+ S++
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEE- 106
++L++ + GEM+ A E F P DVV WT+++ G+ + G AL F M E
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 107 -VSPDPVTLVSAASACAQLSDS--KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
++P+ T VS S+CA +LG+ IHG+V + +L +LL++YGK G ++
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 164 SAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA 223
A +F ++ DK V +W+++++ A NG AL++F M + PN +TL++ L ACA
Sbjct: 276 MALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Query: 224 SASYLEEGRKI 234
+ ++ G ++
Sbjct: 336 RSKLVDLGIQL 346
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 276 KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
K + L Y TG S+ +F +ML+ V+P+ + ++ A + V L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAK---------------------CSSI---------- 364
H K GF + ++ S + Y + C+S+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD--LKPNKVTFISIL 422
D A + F+ M DVV W+++I + G +AL +F +M + + PN+ TF+S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 423 SACSH--AGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
S+C++ G + G I +++K +++ + ++D+ G+ G+L+ AL I + +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 2 HATARPDSHTVSIALKSCVGLQK--LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE 59
A P+ T L SC + + +G+ IHG++ + + +G+AL+++Y K G+
Sbjct: 214 RAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGD 273
Query: 60 MNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAAS 119
+ A+ +F + V W +I++ +G P+ AL F M V P+ +TL++ +
Sbjct: 274 LEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKS-SYVHPNGITLLAILT 332
Query: 120 ACAQLSDSKLGRSIHGFVKRCGLDTHLSLA---NSLLNLYGKTGSIKSAEILFREMP 173
ACA+ LG I F C + + +++L G+ G + A + +P
Sbjct: 333 ACARSKLVDLG--IQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 176/299 (58%), Gaps = 6/299 (2%)
Query: 264 ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKILTA 322
E A+ ++P + VV+W + GYA +++ +F M++ D ++P+ + ++ IL A
Sbjct: 206 EKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPA 265
Query: 323 ISELGVLQQAVCLHAFVTKSGF-DNNEYIGASLIEMYAKCSSIDNANKVFRGM--AYKDV 379
+ LG L+ +HA+V K GF + + SLI+ YAKC I +A K F + K++
Sbjct: 266 VWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNL 325
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG-ITIF 438
V W+++I+A+ HG G+EA+ +F M LKPN+VT IS+L+ACSH GL EE + F
Sbjct: 326 VSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFF 384
Query: 439 DIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHN 498
+ MVN+Y++ PD +HYG +VD+L R G L+ A I +P++ VW LLGAC ++ +
Sbjct: 385 NTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDD 444
Query: 499 IKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMV 557
++ E + L L+ +H G Y L+SNI+C + +A + R + + K+ G S V
Sbjct: 445 AELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 37/288 (12%)
Query: 37 KENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPD---------------------- 74
K + ++V +AL+ +Y G M DA +VF E P+ +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 75 ---------VVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VV WT+I+ GY R P+ A+ FSRM + + P+ +T+++ A L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 126 DSKLGRSIHGFV-KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD--KDVISWSS 182
D K+ S+H +V KR + + + NSL++ Y K G I+SA F E+P+ K+++SW++
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG--RKIHQLAVS 240
M++ +A +G A+ +F +M ++PN VT++S L AC+ EE + +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFGG 287
Y + L+DM + E A I IP ++ V W +L G
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 138/301 (45%), Gaps = 44/301 (14%)
Query: 139 RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD---------------------- 176
+ G ++H+ + +L+ +Y G++ A +F EMP+++
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 177 ---------VISWSSMLACYADNGAATNALDLFNEMID-KRIEPNWVTLVSALRACASAS 226
V+SW++++ YA A+ LF+ M+ I+PN +T+++ L A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 227 YLEEGRKIHQLAVSYGF-ELETTVSTALMDMYLKCSSPENAVDIFNRIP--KKDVVAWAV 283
L+ +H GF + V+ +L+D Y KC ++A F IP +K++V+W
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT--- 340
+ +A GM +++ +F +M G++P+ V ++ +L A S G+ ++ L F T
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEF-LEFFNTMVN 389
Query: 341 --KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD-VVIWSSIIAAYGFHGQGEE 397
K D Y L++M + ++ A K+ + ++ V+W ++ A + E
Sbjct: 390 EYKITPDVKHY--GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 398 A 398
A
Sbjct: 448 A 448
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENL-DGDMFVGSALIELYSKCGEMNDAV 64
+P+ T+ L + L L++ +H ++ K D+ V ++LI+ Y+KCG + A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 65 EVFMEYP--KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
+ F+E P + ++V WT++++ + G + A++ F M L + P+ VT++S +AC+
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERL-GLKPNRVTMISVLNACS 371
Query: 123 Q--LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVIS 179
L++ + + V + + L+++ + G ++ AE + E+P ++ +
Sbjct: 372 HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV 431
Query: 180 WSSML-AC 186
W +L AC
Sbjct: 432 WRMLLGAC 439
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/617 (22%), Positives = 284/617 (46%), Gaps = 72/617 (11%)
Query: 38 ENLDGDMFVGSALIELYSKCGEMNDAVEVF-MEYPKPDVVLWTSIVTGYERS-GTPELAL 95
E L+ +++ +A+I Y K + +A E+F + + D++ + ++++G+ ++ G A+
Sbjct: 48 EMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAI 107
Query: 96 AFFSRMAVLE--EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
F M E ++ D T+ + A+L++ G +HG + + G D +SL+
Sbjct: 108 EMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLI 167
Query: 154 NLYGKTGSIKSA----------------------------------EILFREMPDKDVIS 179
++Y K G K + +R D IS
Sbjct: 168 HMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTIS 227
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAV 239
W++++A YA NG AL + M + ++ + + + L +S L+ G+++H +
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL 287
Query: 240 SYGFELETTVSTALMDMYLKCSSPE-------------------------------NAVD 268
G VS+ ++D+Y KC + + A
Sbjct: 288 KNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKR 347
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR-PDAVALVKILTAISELG 327
+F+ + +K++V W +F GY +E+ +++ PD++ +V +L A S
Sbjct: 348 LFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 328 VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIA 387
++ +H ++G ++ + + ++MY+KC +++ A ++F +D V+++++IA
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIA 467
Query: 388 AYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQL 447
HG ++ + F M KP+++TF+++LSAC H GLV EG F M+ Y +
Sbjct: 468 GCAHHGHEAKSFQHFEDMT-EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 448 MPDSEHYGIMVDLLGRMGELDRALDIINNM-PMQAGPHVWGALLGACHIHHNIKMGEVAA 506
P++ HY M+DL G+ LD+A++++ + ++ + GA L AC + N ++ +
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVE 586
Query: 507 KNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSF 566
+ L ++ ++ Y ++N Y W ++R ++ L+ G S + + H F
Sbjct: 587 EKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMF 646
Query: 567 VASDRFHDESDQIFEVL 583
+SD H E++ I+ +L
Sbjct: 647 TSSDISHYETEAIYAML 663
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 204/461 (44%), Gaps = 76/461 (16%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKC---------- 57
D TV+ +K L + G +HG L K DG F S+LI +YSKC
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 58 -----------------------GEMNDAVEVFMEYPK-PDVVLWTSIVTGYERSGTPEL 93
G+++ A+ VF P+ D + W +++ GY ++G E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 94 ALAFFSRMAV-LEE--VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
AL +MAV +EE + D + + + + L K+G+ +H V + G ++ +++
Sbjct: 244 AL----KMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 151 SLLNLYGKTGSIKSAEI-------------------------------LFREMPDKDVIS 179
++++Y K G++K AE LF + +K+++
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 180 WSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
W++M Y + + L+L I ++ P+ + +VS L AC+ +Y+E G++IH +
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHS 419
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+ G ++ + TA +DMY KC + E A IF+ ++D V + + G A G KS
Sbjct: 420 LRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSF 479
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELG-VLQQAVCLHAFVTKSGFDNNEYIGASLIEM 357
+ F +M G +PD + + +L+A G VL+ + + +I++
Sbjct: 480 QHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDL 539
Query: 358 YAKCSSIDNANKVFRGM--AYKDVVIWSSIIAAYGFHGQGE 396
Y K +D A ++ G+ KD VI + + A ++ E
Sbjct: 540 YGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 42/331 (12%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN---- 61
+ D H+ L L+ L++G+ +H + K + FV S ++++Y KCG M
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 62 ---------------------------DAVEVFMEYPKPDVVLWTSIVTGYERSGTP--- 91
+A +F + ++V+WT++ GY P
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Query: 92 -ELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
ELA AF + E +PD + +VS AC+ + + G+ IHG R G+ L
Sbjct: 377 LELARAFIAN----ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 151 SLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
+ +++Y K G+++ AE +F ++D + +++M+A A +G + F +M + +P
Sbjct: 433 AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKP 492
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAV-SYGFELETTVSTALMDMYLKCSSPENAVDI 269
+ +T ++ L AC + EG K + + +Y ET T ++D+Y K + A+++
Sbjct: 493 DEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL 552
Query: 270 FNRIPKKDVVAWAVLFGGYAETGMAHKSMEV 300
I + V AV+ G + +K+ E+
Sbjct: 553 MEGIDQ--VEKDAVILGAFLNACSWNKNTEL 581
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 4 TARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
T PDS + L +C +E G+ IHG + + D + +A +++YSKCG + A
Sbjct: 388 TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
+F + D V++ +++ G G + F M PD +T ++ SAC
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE-GGFKPDEITFMALLSACRH 506
Query: 124 ----LSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFR--EMPDKDV 177
L K +S+ ++ + +++LYGK + A L + +KD
Sbjct: 507 RGLVLEGEKYFKSM---IEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDA 563
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRI---EPNWVTLVSALRACASASYLEEGRKI 234
+ +L + + + +L E+ +K + N + A AS+ +E ++I
Sbjct: 564 V----ILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRI 619
Query: 235 -HQLAVSYGFELE 246
HQ+ G ELE
Sbjct: 620 RHQMR---GKELE 629
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 215/441 (48%), Gaps = 38/441 (8%)
Query: 147 SLANSLLNLYGKTGSIKSAE-----ILFREMPDKDVISWSSMLACYAD--------NGAA 193
SL L+ Y S +S+ ++F D ++++L C N A+
Sbjct: 40 SLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLKCSKPEDSIRIFANYAS 99
Query: 194 TNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT-VSTA 252
++L NE +V ++ A AS+S L GR +H + GF E+ + T
Sbjct: 100 KSSLLYLNER-------TFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTT 152
Query: 253 LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE-----TGMAHKSMEVFCNM--L 305
L+ Y K A +F+ +P++ V W + GGY A K+M +F
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCC 212
Query: 306 SDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGF--DNNEYIGASLIEMYAKCSS 363
GVRP +V +L+AIS+ G+L+ +H ++ K GF + + +IG +L++MY+KC
Sbjct: 213 GSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC 272
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
++NA VF M K+V W+S+ +G+G E L +MA S +KPN++TF S+LS
Sbjct: 273 LNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA-ESGIKPNEITFTSLLS 331
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
A H GLVEEGI +F M ++ + P EHYG +VDLLG+ G + A I MP++
Sbjct: 332 AYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPL---DPNHAGY----YTLLSNIYCVDKNWHNA 536
+ +L AC I+ MGE K L + D +G Y LSN+ W
Sbjct: 392 ILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Query: 537 AKLRSLIKENRLKKVLGQSMV 557
KLR +KE R+K G S V
Sbjct: 452 EKLRKEMKERRIKTRPGYSFV 472
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 171/366 (46%), Gaps = 27/366 (7%)
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFF----SRMAVLEEVSPDPVTLVSAASAC 121
VF + PD L+ +++ + PE ++ F S+ ++L V ++ A +
Sbjct: 66 VFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 122 AQLSDSKLGRSIHGFVKRCGL--DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS 179
A S ++GR +HG VK+ G ++ L + +LL+ Y K G ++ A +F EMP++ ++
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVT 180
Query: 180 WSSMLACYAD-----NGAATNALDLFNEM--IDKRIEPNWVTLVSALRACASASYLEEGR 232
W++M+ Y N A A+ LF + P T+V L A + LE G
Sbjct: 181 WNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGS 240
Query: 233 KIHQLAVSYGF--ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
+H GF E++ + TAL+DMY KC NA +F + K+V W + G A
Sbjct: 241 LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL 300
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL-HAFVTKSGFDNN-E 348
G +++ + M G++P+ + +L+A +G++++ + L + T+ G E
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIE 360
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAYGFHGQ---GEEALKLFYQ 404
+ G ++++ K I A + M K D ++ S+ A +G+ GEE K +
Sbjct: 361 HYGC-IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 405 MANHSD 410
+ +
Sbjct: 420 IEREDE 425
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 9/216 (4%)
Query: 25 LEVGRMIHGFLKKEN-LDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVT 83
L VGR++HG +KK L +G+ L+ Y+K G++ A +VF E P+ V W +++
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 84 GY-----ERSGTPELALAFFSRMAVL-EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFV 137
GY + + A+ F R + V P T+V SA +Q ++G +HG++
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 138 KRCGL--DTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATN 195
++ G + + + +L+++Y K G + +A +F M K+V +W+SM A NG
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
+L N M + I+PN +T S L A +EEG
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENL--DGDMFVGSALIELYSKCGEMNDA 63
RP T+ L + LE+G ++HG+++K + D+F+G+AL+++YSKCG +N+A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQ 123
VF +V WTS+ TG +G +RMA + P+ +T S SA
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAE-SGIKPNEITFTSLLSAYRH 335
Query: 124 LSDSKLGRSIHGFVK-RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWS 181
+ + G + +K R G+ + +++L GK G I+ A MP K D I
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 182 SML-AC 186
S+ AC
Sbjct: 396 SLCNAC 401
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 202/402 (50%), Gaps = 38/402 (9%)
Query: 108 SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEI 167
SP+ + S +QL + IH + + L L L+++ G + A +
Sbjct: 20 SPEASYFLRTCSNFSQL------KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASL 73
Query: 168 LFREMPDKDVISWSSMLACYADNGAATNALDLFN-EMIDKRIEPNWVTLVSALRACASAS 226
+F ++ +W+ M+ + N AL LF MI + + + T ++AC ++S
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 227 YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP----------------------- 263
+ G ++H LA+ GF + LMD+Y KC P
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 264 --------ENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
++A +FN++P ++VV+W + Y + ++ ++F M D V+P+
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA 375
+V +L A ++LG L +H + K+GF + ++G +LI+MY+KC S+ +A KVF M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 376 YKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGI 435
K + W+S+I + G HG GEEAL LF +M + ++P+ +TF+ +LSAC++ G V++G+
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 436 TIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
F M+ Y + P EH M+ LL + E+++A +++ +M
Sbjct: 374 RYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 9 SHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFM 68
S S L++C +L + IH + K NL D + LI + S GE A VF
Sbjct: 20 SPEASYFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 69 EYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
+ P W ++ + P AL F M + + D T AC S +
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIR 136
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML---- 184
LG +HG + G + N+L++LY K G S +F +MP + ++SW++ML
Sbjct: 137 LGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLV 196
Query: 185 ---------------------------ACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
Y N A LF M ++PN T+V+
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
L+A L GR +H A GF L+ + TAL+DMY KC S ++A +F+ + K
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAISELG 327
+ W + G +++ +F M + V PDA+ V +L+A + G
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 34/268 (12%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCG--------- 58
D T +K+C+ + +G +HG K D+F + L++LY KCG
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 59 ----------------------EMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALA 96
+++ A VF + P +VV WT+++T Y ++ P+ A
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 97 FFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLY 156
F RM V ++V P+ T+V+ A QL +GR +H + + G L +L+++Y
Sbjct: 238 LFRRMQV-DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 157 GKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK-RIEPNWVTL 215
K GS++ A +F M K + +W+SM+ +G AL LF EM ++ +EP+ +T
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 216 VSALRACASASYLEEG-RKIHQLAVSYG 242
V L ACA+ +++G R ++ YG
Sbjct: 357 VGVLSACANTGNVKDGLRYFTRMIQVYG 384
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ T+ L++ L L +GR +H + K D F+G+ALI++YSKCG + DA +
Sbjct: 248 KPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK 307
Query: 66 VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLS 125
VF + W S++T G E AL+ F M V PD +T V SACA
Sbjct: 308 VFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Query: 126 DSKLG 130
+ K G
Sbjct: 368 NVKDG 372
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 35/412 (8%)
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
Y + + AL + +++ P+ T VS + ++ G+ H A+ +G +
Sbjct: 93 YLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQV 152
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG---MAHK------- 296
V +LM MY C + + A +F IPK+D+V+W + G G AHK
Sbjct: 153 LPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
Query: 297 ---------------------SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
S+ +F M+ G + + LV +L A L++ +
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQG 395
HA + ++ +++ I +LI+MY KC + A ++F ++ ++ V W+ +I A+ HG+
Sbjct: 273 HASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP 332
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYG 455
E L+LF M N L+P++VTF+ +L C+ AGLV +G + + +MV+++Q+ P+ H
Sbjct: 333 EGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW 391
Query: 456 IMVDLLGRMGELDRALDIINNMP---MQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPL 512
M +L G + A + + N+P + W LL + N +GE AK+L
Sbjct: 392 CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIET 451
Query: 513 DPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVH 564
DP + YY LL NIY V W + ++R ++KE ++ ++ G +V+LK VH
Sbjct: 452 DPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 47/385 (12%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP 109
L++ S+ G+ + V ++ K + + Y S +P+ AL F+ + V P
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRFGFV-P 116
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYG------------ 157
D T VS S + G+ HG + G D L + NSL+++Y
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 158 -------------------KTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALD 198
+ G + +A LF EMPDK++ISW+ M++ Y ++
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 199 LFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYL 258
LF EM+ + N TLV L AC ++ L+EGR +H + + TAL+DMY
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 259 KCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVK 318
KC A IF+ + ++ V W V+ + G +E+F M++ +RPD V V
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 319 ILTAISELGVLQQAVCLHA-----FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
+L + G++ Q ++ F K F + + +Y+ + A + +
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQ----WCMANLYSSAGFPEEAEEALKN 412
Query: 374 MAYKDVVI----WSSIIAAYGFHGQ 394
+ +DV W++++++ F G
Sbjct: 413 LPDEDVTPESTKWANLLSSSRFTGN 437
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 154/326 (47%), Gaps = 45/326 (13%)
Query: 7 PDSHTVSIALKSCVGLQK---LEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDA 63
PDS+T ++L SC+ +K ++ G+M HG K D + V ++L+ +Y+ CG ++ A
Sbjct: 116 PDSYTF-VSLISCI--EKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 64 VEVFMEYPKPDVVLWTSIVTGYERSG-------------------------------TPE 92
++F+E PK D+V W SI+ G R+G P
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 93 LALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
++++ F M V + TLV +AC + + K GRS+H + R L++ + + +L
Sbjct: 233 VSISLFREM-VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTAL 291
Query: 153 LNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
+++YGK + A +F + ++ ++W+ M+ + +G L+LF MI+ + P+
Sbjct: 292 IDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDE 351
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTV--STALMDMYLKCSSPENAVDIF 270
VT V L CA A + +G+ + L V F+++ + ++Y PE A +
Sbjct: 352 VTFVGVLCGCARAGLVSQGQSYYSLMVDE-FQIKPNFGHQWCMANLYSSAGFPEEAEEAL 410
Query: 271 NRIPKKDVVA----WAVLFGGYAETG 292
+P +DV WA L TG
Sbjct: 411 KNLPDEDVTPESTKWANLLSSSRFTG 436
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 6/210 (2%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEM 60
+ A + + T+ + L +C +L+ GR +H L + L+ + + +ALI++Y KC E+
Sbjct: 242 VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEV 301
Query: 61 NDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
A +F + V W ++ + G PE L F M + + PD VT V
Sbjct: 302 GLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCG 360
Query: 121 CAQLSDSKLGRSIHGF-VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV-- 177
CA+ G+S + V + + + NLY G + AE + +PD+DV
Sbjct: 361 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTP 420
Query: 178 --ISWSSMLACYADNGAATNALDLFNEMID 205
W+++L+ G T + +I+
Sbjct: 421 ESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
++H ++ G +++ + L+ + V I+ I K + +F Y +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSS 97
Query: 293 MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA 352
+++ + ++L G PD+ V +++ I + + H K G D +
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 353 SLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN----- 407
SL+ MY C ++D A K+F + +D+V W+SIIA +G A KLF +M +
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 408 -------------------------HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+ + N+ T + +L+AC + ++EG ++ ++
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 443 NKY---QLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIH 496
+ ++ D+ ++D+ G+ E+ A I +++ ++ W ++ A +H
Sbjct: 278 RTFLNSSVVIDTA----LIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLH 329
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 224/488 (45%), Gaps = 85/488 (17%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ + + +KS G + ++K D +V + ++++Y K + A +V
Sbjct: 104 PDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV 158
Query: 67 FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSD 126
F + + W +++GY + G E A F M + VS +
Sbjct: 159 FDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVM-------------- 204
Query: 127 SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLAC 186
I GF K +++A F MP+K V+SW++ML+
Sbjct: 205 ------ITGF--------------------AKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
YA NG +AL LFN+M+ + PN T V + AC+ + R + +L L
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRI--------------------------------P 274
V TAL+DM+ KC ++A IFN + P
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG-VRPDAVALVKILTAISELGVLQQAV 333
K++VV+W L GYA G A ++E F +M+ G +PD V ++ +L+A + L+
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHG 393
C+ ++ K+ N+ SLI MYA+ ++ A +VF M +DVV ++++ A+ +G
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG 478
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
G E L L +M + ++P++VT+ S+L+AC+ AGL++EG IF + N P ++H
Sbjct: 479 DGVETLNLLSKMKDEG-IEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADH 532
Query: 454 YGIMVDLL 461
Y M DLL
Sbjct: 533 YACM-DLL 539
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 132/314 (42%), Gaps = 70/314 (22%)
Query: 228 LEEGRKIH-QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAV--- 283
+E RK+ Q++ G + +S Y K + E A +F+ +P+ DVV+W V
Sbjct: 152 VESARKVFDQISQRKGSDWNVMISG-----YWKWGNKEEACKLFDMMPENDVVSWTVMIT 206
Query: 284 ----------------------------LFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
+ GYA+ G ++ +F +ML GVRP+
Sbjct: 207 GFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETT 266
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR--- 372
V +++A S L + + N ++ +L++M+AKC I +A ++F
Sbjct: 267 WVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG 326
Query: 373 -----------------------------GMAYKDVVIWSSIIAAYGFHGQGEEALKLFY 403
M ++VV W+S+IA Y +GQ A++ F
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 404 QMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGR 463
M ++ D KP++VT IS+LSAC H +E G I D + K Q+ + Y ++ + R
Sbjct: 387 DMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRSLIFMYAR 445
Query: 464 MGELDRALDIINNM 477
G L A + + M
Sbjct: 446 GGNLWEAKRVFDEM 459
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 18/231 (7%)
Query: 269 IFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
IF+ + +V +F +++ MA+ + ++ G+ PDA + ++ + G+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAA 388
L QA+ V K GF + Y+ +++MY K S+++A KVF ++ + W+ +I+
Sbjct: 122 LFQAL-----VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
Y G EEA KLF M + + V++ +++ + +E FD M K +
Sbjct: 177 YWKWGNKEEACKLFDMMPEN-----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV- 230
Query: 449 PDSEHYGIMVDLLGRMGELDRALDIINNM---PMQAGPHVWGALLGACHIH 496
+ M+ + G + AL + N+M ++ W ++ AC
Sbjct: 231 ----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
+ ++PD T+ L +C + LE+G I +++K + + +LI +Y++ G +
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 62 DAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+A VF E + DVV + ++ T + +G L S+M E + PD VT S +AC
Sbjct: 451 EAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD-EGIEPDRVTYTSVLTAC 509
Query: 122 AQLSDSKLGRSIHGFVK 138
+ K G+ I ++
Sbjct: 510 NRAGLLKEGQRIFKSIR 526
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
+L G PD V + + + L L+ + +H +S F + + +I M+ +CSS
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 364 IDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
I +A +VF M KD+ W ++ AY +G G++AL LF +M H LKPN+ TF+++
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-LKPNEETFLTVFL 345
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
AC+ G +EE FD M N++ + P +EHY ++ +LG+ G L A I ++P +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHA 517
W A+ +H +I + + + + +DP+ A
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 109 PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEIL 168
PD V +CA L + + +H + L N +++++G+ SI A+ +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 169 FREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYL 228
F M DKD+ SW M+ Y+DNG +AL LF EM ++PN T ++ ACA+ +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 229 EE 230
EE
Sbjct: 354 EE 355
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 202 EMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS 261
E++DK P+ V +CA+ LE +K+H + F + ++ ++ M+ +CS
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 262 SPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
S +A +F+ + KD+ +W ++ Y++ GM ++ +F M G++P+ + +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 322 AISELGVLQQAVCLHAFVTKSGFDN--NEYIGASLIEMY-------AKCSSIDNANKVFR 372
A + +G +++A LH FD+ NE+ + E Y KC + A + R
Sbjct: 346 ACATVGGIEEAF-LH-------FDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 373 GMAYKDVV-IWSSIIAAYGFHG 393
+ ++ W ++ HG
Sbjct: 398 DLPFEPTADFWEAMRNYARLHG 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
A PD + +SC L+ LE + +H + GD + + +I ++ +C + DA
Sbjct: 232 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 291
Query: 65 EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
VF D+ W ++ Y +G + AL F M + P+ T ++ ACA +
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM-TKHGLKPNEETFLTVFLACATV 350
Query: 125 SD-SKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSM 183
+ G+ +L + GK G + AE R++P + +
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 184 LACYA 188
+ YA
Sbjct: 411 MRNYA 415
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 312 DAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
D L+++ E LQ+A +H ++ S + L+EMY+ C + A VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 372 RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLV 431
M+ K++ W II + +G GE+A+ +F + ++ P+ F I AC G V
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDV 371
Query: 432 EEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLG 491
+EG+ F+ M Y + P E Y +V++ G LD AL+ + MPM+ VW L+
Sbjct: 372 DEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
Query: 492 ACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKV 551
+H N+++G+ A+ + LDP + I K + KE+ LKK
Sbjct: 432 LSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFI---------PVKASDVEKES-LKKR 481
Query: 552 LGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECY 595
G + +K+ + F A D E+D++F++LR L + M E Y
Sbjct: 482 SG-ILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGY 524
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 211 NWVTLVSAL----RACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
N+V +S L + C A L+E + +H + L+ + + L++MY C A
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 267 VDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+F ++ +K++ W ++ +A+ G ++++F +G PD I A L
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 327 GVLQQAVCLHAFVTKS-GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSS 384
G + + + +++ G + SL+EMYA +D A + M + +V +W +
Sbjct: 369 GDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWET 428
Query: 385 IIAAYGFHGQGE 396
++ HG E
Sbjct: 429 LMNLSRVHGNLE 440
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
D L+ A C + + +++HG + LS + LL +Y G A +F
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 170 REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE 229
+M +K++ +W ++ C+A NG +A+D+F+ ++ P+ AC ++
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVD 372
Query: 230 EG-RKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVL 284
EG ++ YG +L++MY + A++ R+P + +V W L
Sbjct: 373 EGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETL 429
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Query: 17 KSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVV 76
K C + L+ + +HG + D+ L+E+YS CG N+A VF + + ++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 77 LWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG-RSIHG 135
W I+ + ++G E A+ FSR + PD AC L D G
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDEGLLHFES 380
Query: 136 FVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP-DKDVISWSSML 184
+ G+ + SL+ +Y G + A MP + +V W +++
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 192/419 (45%), Gaps = 30/419 (7%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PD+V + +++ G + G P+LAL ++M ++ D V + + +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACY 187
++ + G+ + +SL++ G A L +M ++ +V++++S++ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
A G A LF+EMI + I+PN VT S + L+E ++I L VS +
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCN 303
L++ + K + +++F + ++ + V + L G+ + + VF
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M+SDGV P+ + +L + + G L++A+ + ++ KS + + Y + E K
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 364 IDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+++ +F ++ K DV+ ++++I+ + G EEA LF +M L P+ T+
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYN 559
Query: 420 SILSA-------CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
+++ A + A L++E + + D+ YG++ D+L G LD+
Sbjct: 560 TLIRAHLRDGDKAASAELIKE--------MRSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 140/315 (44%), Gaps = 12/315 (3%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
++ +++ M+ C + AL + +M+ P+ VTL S L + + E +
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAET 291
V G++ +T T L+ + + AV + R+ K D+V + + G +
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G ++ + M + D V ++ ++ + + A+ L + G + +
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+SLI +A+++ M + +VV ++S+I A+ G+ EA KLF +M
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 408 HSDLKPNKVTFISILSA-CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
S + PN VT+ S+++ C H L +E IF +MV+K +PD Y +++ + +
Sbjct: 339 RS-IDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSK-DCLPDVVTYNTLINGFCKAKK 395
Query: 467 LDRALDIINNMPMQA 481
+ +++ +M +
Sbjct: 396 VVDGMELFRDMSRRG 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 174/408 (42%), Gaps = 39/408 (9%)
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE----GRKIHQLAVSYGFELETTVST 251
A+DLF EM+ R P+ V L A A + G K+ L VS+
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNL----YTYN 104
Query: 252 ALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
+++ + S A+ I ++ K +V L G+ +++ + M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 308 GVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA 367
G +PD V ++ + + +AV L + G + ++I K D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 368 ----NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS 423
NK+ +G DVVI+S++I + + ++AL LF +M N ++P+ T+ S++S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLIS 283
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-G 482
+ G + + M+ + ++ P+ + ++D + G+L A + + M ++
Sbjct: 284 CLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 483 PHV--WGALLGACHIHHNIKMGEVAAKNLFPLD------PNHAGYYTLLSNIYCVDKNWH 534
P++ + +L+ +H + A+ +F L P+ Y TL+ N +C K
Sbjct: 343 PNIVTYNSLINGFCMHDRLD----EAQQIFTLMVSKDCLPDVVTYNTLI-NGFCKAKKVV 397
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFV-ASDRFHDESDQIFE 581
+ + L ++ + ++G + V +H F ASD D + +F+
Sbjct: 398 DGME---LFRDMSRRGLVGNT-VTYTTLIHGFFQASD--CDNAQMVFK 439
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 176/398 (44%), Gaps = 54/398 (13%)
Query: 131 RSIHGFVKRCGLDTHL--SLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSML 184
R+ F+K+ + L S+ ++++ GK G + SA +F + + DV S++S++
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVT--------------------LVSALRA--- 221
+ +A++G A+++F +M + +P +T LV +++
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 222 -------------CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
C S +E ++ + + GF + AL+D+Y K P+ A+
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 269 IFNRIP----KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
+ N + +V + L YA GM ++ME+ M G +PD +L+
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR-----GMAYKDV 379
G ++ A+ + + +G N + I+MY K+F G++ D+
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS-PDI 454
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFD 439
V W++++A +G +G E +F +M + P + TF +++SA S G E+ +T++
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 440 IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
M++ + PD Y ++ L R G +++ ++ M
Sbjct: 514 RMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 199/467 (42%), Gaps = 25/467 (5%)
Query: 30 MIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGY 85
M +G L+++ D++ ++LI ++ G +AV VF + KP ++ + I+ +
Sbjct: 195 MFNG-LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 86 ERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTH 145
+ GTP + + ++PD T + + C + S + + +K G
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYD 313
Query: 146 LSLANSLLNLYGKTGSIKSAEILFREMP----DKDVISWSSMLACYADNGAATNALDLFN 201
N+LL++YGK+ K A + EM +++++S+++ YA +G A++L N
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 202 EMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCS 261
+M +K +P+ T + L A +E I + + G + A + MY
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 262 SPENAVDIFNRIP----KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV 317
+ IF+ I D+V W L + + GM + VF M G P+
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF----RG 373
+++A S G +QA+ ++ + +G + +++ A+ + + KV G
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 374 MAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH---SDLKPNKVTFISILSACSHAGL 430
+ + + S++ AY G+E + L + +A ++P V +++ CS L
Sbjct: 554 RCKPNELTYCSLLHAY---ANGKE-IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 431 VEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ E F + + PD MV + GR + +A +++ M
Sbjct: 610 LPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 176/460 (38%), Gaps = 121/460 (26%)
Query: 48 SALIELYSKCGEMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRM-- 101
++LI Y++ G +++A+E+ + KPDV +T++++G+ER+G E A++ F M
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 102 ---------------------------AVLEEV-----SPDPVTLVSAASACAQLSDSKL 129
+ +E+ SPD VT + + Q
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 130 GRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLA 185
+ +KR G N+L++ Y + GS + A ++R M D D+ +++++LA
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA------------------------ 221
A G + + EM D R +PN +T S L A
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Query: 222 -----------CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
C+ L E + GF + T +++ +Y + A +
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 271 NRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+ + ++ + + L ++ + KS E+ +L+ G++PD ++ ++ A
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA---- 708
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA----YKDVVIW 382
Y + + + +A+++F M DV+ +
Sbjct: 709 -------------------------------YCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
++ I +Y EEA+ + M H +PN+ T+ SI+
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHG-CRPNQNTYNSIV 776
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 157/416 (37%), Gaps = 53/416 (12%)
Query: 5 ARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAV 64
+PD T + L K+E I ++ ++ +A I++Y G+ + +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 65 EVFMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV--TLVSAA 118
++F E PD+V W +++ + ++G F M V TL+SA
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD---- 174
S C + +++ + G+ LS N++L + G + +E + EM D
Sbjct: 500 SRCGSFEQAM---TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+ +++ S+L YA+ L E+ IEP V L + + C+ L E +
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 235 HQLAVSYGFELETTVSTALMDMYLK----------------------------------- 259
GF + T +++ +Y +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 260 ----CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
S E +I + K D++++ + Y + +F M + G+ PD +
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 316 LVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF 371
+ + + + ++A+ + ++ K G N+ S+++ Y K + D A K+F
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLF 791
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 216/493 (43%), Gaps = 58/493 (11%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVF---MEYP-KPDVVLWTSIVTGYERSGTPELALAFFS 99
++ SALI Y + G +A+ VF EY +P++V + +++ + G +A F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 100 RMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKT 159
V PD +T S + C++ + R++ + ++ + N+LL+ K
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 160 GSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTL 215
G + A + +MP K +V+S+S+++ +A G AL+LF EM I + V+
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 216 VSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK 275
+ L EE I + S G + + AL+ Y K + +F + +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 276 KDVV----AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQ 331
+ V+ ++ L GY++ G+ ++ME+F S G+R D V ++ A+ + G++
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 332 AVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGF 391
AV L +TK G N S+I+ + + +++D + G + + SS ++A
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGS---LPFSSSALSALT- 623
Query: 392 HGQGEEALKLFYQMANHS----------------------------DLKPNKVTFISILS 423
+G ++LF Q+ S ++KPN VTF +IL+
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 424 ACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA-------LDIINN 476
ACS E+ +++ + +L D++ YG++ LL MG+ + D +N
Sbjct: 684 ACSRCNSFEDA----SMLLEELRLF-DNKVYGVVHGLL--MGQRENVWLQAQSLFDKVNE 736
Query: 477 MPMQAGPHVWGAL 489
M + AL
Sbjct: 737 MDGSTASAFYNAL 749
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 343 GFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA----YKDVVIWSSIIAAYGFHGQGEEA 398
G+ N Y ++LI Y + + A VF M ++V ++++I A G G +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 399 LKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
+ F+ + ++P+++TF S+L+ CS GL E +FD M N+ ++ D Y ++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLL 381
Query: 459 DLLGRMGELDRALDIINNMPMQ 480
D + + G++D A +I+ MP++
Sbjct: 382 DAICKGGQMDLAFEILAQMPVK 403
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 209/479 (43%), Gaps = 33/479 (6%)
Query: 23 QKLEVGRMIHGFLKKENLD-----GDMFVGSALIELYSKCGEMNDAVEVF--MEYPK--P 73
Q + G + GF EN+ D+ + LI + + G+ A ++ +E P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 74 DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDS-KLGRS 132
DV+ + +++GY ++G AL+ RM+ VSPD VT + + L DS KL ++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRS---LCDSGKLKQA 223
Query: 133 IHGFVKRCGLDTHLSLANS--LLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLAC 186
+ + D + + L+ + + A L EM D+ DV++++ ++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
G A+ N+M +PN +T LR+ S + K+ + GF
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIP----KKDVVAWAVLFGGYAETGMAHKSMEVFC 302
L++ + A+DI ++P + + +++ L G+ + +++E
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
M+S G PD V +LTA+ + G ++ AV + ++ G ++I+ AK
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 363 SIDNANKVFRGMAYKDV----VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
A K+ M KD+ + +SS++ G+ +EA+K F++ ++PN VTF
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTF 522
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
SI+ + + I M+N+ P+ Y I+++ L G AL+++N +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 15/272 (5%)
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK-- 276
LR LEEG K + V +G + T L+ + + A I +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 277 --DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
DV+ + V+ GY + G + ++ V M V PD V IL ++ + G L+QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYG 390
+ + + + LIE + S + +A K+ M + DVV ++ ++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 391 FHGQGEEALKLFYQMANHSDLKPNKVTFISIL-SACSHAGLVEEGITIFDIMVNKYQLMP 449
G+ +EA+K M + S +PN +T IL S CS ++ + D++ + P
Sbjct: 286 KEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--P 342
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
+ I+++ L R G L RA+DI+ MP
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 161/422 (38%), Gaps = 52/422 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T + L+S KL+ + + + + D+ + LIE + + A+++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 67 FMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVT----LVSAA 118
E PDVV + +V G + G + A+ F + M P+ +T L S
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMC 320
Query: 119 SACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD---- 174
S + KL + R G + N L+N + G + A + +MP
Sbjct: 321 STGRWMDAEKLLADML----RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+ +S++ +L + A++ M+ + P+ VT + L A +E+ +I
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV----VAWAVLFGGYAE 290
S G ++D K A+ + + + KD+ + ++ L GG +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
G ++++ F G+RP+AV I+ + + +A+ F+ G NE
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
LIE G+AY+ G +EAL+L ++ N
Sbjct: 557 YTILIE----------------GLAYE---------------GMAKEALELLNELCNKGL 585
Query: 411 LK 412
+K
Sbjct: 586 MK 587
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 168/365 (46%), Gaps = 14/365 (3%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PD+ + ++V G + G +LAL+ +M ++ D V + A +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACY 187
++ + G+ ++ NSL+ G A L +M ++ +V+++S+++ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
G A L++EMI + I+P+ T S + L+E + + +L +S
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCN 303
L+ + K E +++F + ++ + V + L G + G + ++F
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M+SDGV PD + +L + + G L++A+ + ++ KS + + Y +IE K
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 364 IDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+++ +F ++ K +V+I++++I+ + G EEA LF +M L PN T+
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYN 574
Query: 420 SILSA 424
+++ A
Sbjct: 575 TLIRA 579
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 199/469 (42%), Gaps = 73/469 (15%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFF 98
D++ + LI + + ++ A+ V + K PD+V +S++ GY A+A
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 99 SRMAVLEEVSPDPVT---------LVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLA 149
+M V+E P+ VT L + AS L D + R G L
Sbjct: 174 DQMFVME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR---------GCQPDLFTY 223
Query: 150 NSLLNLYGKTGSIKSAEILFREMP----DKDVISWSSMLACYADNGAATNALDLFNEMID 205
+++N K G I A L ++M + DV+ +++++ + +AL+LF EM +
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 206 KRIEPNWVTLVSALRA-CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
K I PN VT S +R C + + R +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLS----------------------------- 314
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
D+ R +VV ++ L + + G ++ +++ M+ + PD ++
Sbjct: 315 ---DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 325 ELGVLQQAVCLHAF---VTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK---- 377
L +A H F ++K F N +LI+ + K ++ ++FR M+ +
Sbjct: 372 MHDRLDEAK--HMFELMISKDCFPNVVTYN-TLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
+ V ++++I G + A K+F +M + + P+ +T+ +L G +E+ + +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPHV 485
F+ + K ++ PD Y IM++ + + G+++ D+ ++ ++ P+V
Sbjct: 488 FEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 182/437 (41%), Gaps = 46/437 (10%)
Query: 59 EMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+++DAV++F E P P +V + +++ + +L ++ RM L +S D +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSY 118
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
I+ F +R + L LA ++L K G +
Sbjct: 119 ---------------NILINCFCRR----SQLPLALAVLGKMMKLGY------------E 147
Query: 175 KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
D+++ SS+L Y + A+ L ++M +PN VT + + + E +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAE 290
V+ G + + +++ K + A+ + ++ K DVV + +
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYI 350
+ ++ +F M + G+RP+ V ++ + G A L + + + + N
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 351 GASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMA 406
++LI+ + K + A K++ M + D+ +SS+I + H + +EA +F M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 407 NHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
+ D PN VT+ +++ A VEEG+ +F M + L+ ++ Y ++ L + G+
Sbjct: 388 SK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGD 445
Query: 467 LDRALDIINNMPMQAGP 483
D A I M P
Sbjct: 446 CDMAQKIFKKMVSDGVP 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 32/366 (8%)
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLE----EGRKIHQLAVSYGFELETTVS 250
+A+DLF EM+ R P+ V L A A + + G ++ L +SY +
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY----DLYSY 118
Query: 251 TALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
L++ + + S A+ + ++ K D+V + L GY +++ + M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
+P+ V ++ + +AV L + G + + +++ K ID
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 367 A----NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
A K+ +G DVVI+++II A + +AL LF +M N ++PN VT+ S++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLI 297
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA- 481
+ G + + M+ + ++ P+ + ++D + G+L A + + M ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 482 GPHV--WGALLGACHIHHNIKMGEVAAKNLFPLD------PNHAGYYTLLSNIYCVDKNW 533
P + + +L+ +H + AK++F L PN Y TL+ +C K
Sbjct: 357 DPDIFTYSSLINGFCMHDRLD----EAKHMFELMISKDCFPNVVTYNTLIKG-FCKAKRV 411
Query: 534 HNAAKL 539
+L
Sbjct: 412 EEGMEL 417
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T SI L KLE ++ +L+K ++ D++ + +IE K G++ D ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 67 F----MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM 101
F ++ KP+V+++T++++G+ R G E A A F M
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 178/385 (46%), Gaps = 17/385 (4%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PD+V +TS++ G+ E A++ ++M + + PD V + + +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-IKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACY 187
S+ ++ G+ + + SL+N +G + A+ L R M + DVI++++++ +
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
G +A +L+NEMI I PN T S + ++E R++ L + G +
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCN 303
T+L++ + KC ++A+ IF + +K + + + L G+ + G + + EVF +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN---NEYIGASLIEMYAK 360
M+S GV P+ +L + G +++A+ + + K D N + L+
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 361 CSSIDNANKVFRGMAYK--DVVIWSSIIAAYGF--HGQGEEALKLFYQMANHSDLKPNKV 416
++ A VF M + D+ I + I G G+ + A+ LF + + +KPN V
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVV 496
Query: 417 TFISILSACSHAGLVEEGITIFDIM 441
T+ +++S GL E +F M
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKM 521
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 141/323 (43%), Gaps = 14/323 (4%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
D+ + + ++ C+ + A +M+ EP+ VT S + + +EE +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP----KKDVVAWAVLFGGYAET 291
V G + + + T ++D K A+ +F+++ + DVV + L G +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G + + M ++PD + ++ A + G A L+ + + N +
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 352 ASLIEMYAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
SLI + +D A ++F M + DVV ++S+I + + ++A+K+FY+M+
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS- 344
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
L N +T+ +++ G +F MV++ + P+ Y +++ L G++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKV 403
Query: 468 DRALDIINNMPMQ----AGPHVW 486
+AL I +M + P++W
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIW 426
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 148/377 (39%), Gaps = 53/377 (14%)
Query: 7 PDSHTVSIALKS-CVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
PD T + + C+G + E M++ ++ + D+ + + +I+ K G +N A+
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 66 VFMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+F + +PDVV++TS+V G SG A + M ++ PD +T + A
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKIKPDVITFNALIDAF 257
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DV 177
+ ++ + R + ++ SL+N + G + A +F M K DV
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
++++S++ + +A+ +F EM K + N +T + ++ +++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD-------VVAWAVLFGGYAE 290
VS G L+ + A+ IF + K++ + + VL G
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 291 TGMAHKSMEVF-----------------------------------CNMLSDGVRPDAVA 315
G K++ VF C++ S GV+P+ V
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 316 LVKILTAISELGVLQQA 332
+++ + G+ +A
Sbjct: 498 YTTMISGLFREGLKHEA 514
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 229/528 (43%), Gaps = 57/528 (10%)
Query: 1 MHATARPDSH-TVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGE 59
M P +H T SI + +L + + G + K + ++ S+L+ Y
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 60 MNDAV----EVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLV 115
+++AV ++F+ +P+ V + +++ G A+A RM V + PD VT
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM-VAKGCQPDLVTYG 225
Query: 116 SAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK 175
+ + D+ L ++ +++ L+ + + N++++ K + A LF+EM K
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 176 ----DVISWSSMLAC-----------------------------------YADNGAATNA 196
+V+++SS+++C + G A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
L++EM+ + I+P+ VT S + L+E +++ + VS + L+
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 257 YLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
+ K E +++F + ++ + V + +L G + G + E+F M+SDGV P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 313 AVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFR 372
+ +L + + G L++A+ + ++ +S + Y +IE K +++ +F
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 373 GMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
++ K DVV ++++I+ + G EEA LF +M L PN + +++ A
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRD 584
Query: 429 GLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA-LDIIN 475
G E + M D+ G++ ++L G LD++ LD+++
Sbjct: 585 GDREASAELIKEM-RSCGFAGDASTIGLVTNML-HDGRLDKSFLDMLS 630
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 54/332 (16%)
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++ +F M+ P + K+L+AI+++ + L + G +N Y + LI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 357 MYAKCSSIDNANKVFRGM---AYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
+ + S + A V M Y+ ++V SS++ Y + EA+ L QM + +
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQ 183
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
PN VTF +++ E + + D MV K PD YG++V+ L + G+ D A +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 473 IINNM---PMQAGPHVWGALL-GACHIHHNIKMGEVAAKNLFP------LDPNHAGYYTL 522
++N M ++ G ++ ++ G C H M + A NLF + PN Y +L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKH---MDD--ALNLFKEMETKGIRPNVVTYSSL 297
Query: 523 LSNIYCVDKNWHNAAKLRS--------------------LIKENRL-----------KKV 551
+S + C W +A++L S +KE +L K+
Sbjct: 298 ISCL-CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 552 LGQSMVELKNEVHSFVASDRFHDESDQIFEVL 583
+ S+V + ++ F DR DE+ Q+FE +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRL-DEAKQMFEFM 387
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 151/350 (43%), Gaps = 49/350 (14%)
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA-CASASYLEEGRKIHQL 237
++S ++ C+ AL + +M+ EPN VTL S L C S E + Q+
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 238 AVSYGFELET-TVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETG 292
V+ G++ T T +T + ++L + E A+ + +R+ K D+V + V+ G + G
Sbjct: 178 FVT-GYQPNTVTFNTLIHGLFLHNKASE-AMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 293 -----------MAHKSME------------------------VFCNMLSDGVRPDAVALV 317
M +E +F M + G+RP+ V
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
+++ + G A L + + + + + + ++LI+ + K + A K++ M +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 378 ----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEE 433
+V +SS+I + H + +EA ++F M + P+ VT+ +++ VEE
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEE 414
Query: 434 GITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAGP 483
G+ +F M + L+ ++ Y I++ L + G+ D A +I M P
Sbjct: 415 GMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G K++E+ + ++G D L I + LQ+A +H F+T S ++
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDL 411
S+IEMY+ C S+++A VF M +++ W +I + +GQGE+A+ F + +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN- 278
Query: 412 KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRAL 471
KP+ F I AC G + EG+ F+ M +Y ++P EHY +V +L G LD AL
Sbjct: 279 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 472 DIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLD 513
+ + M+ +W L+ +H ++ +G+ + LD
Sbjct: 339 RFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 19/239 (7%)
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
C A L+E + +H+ S + + ++++MY C S E+A+ +FN +P++++ W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC-LHAFVT 340
+ +A+ G +++ F +G +PD +I A LG + + + +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQ---GEE 397
+ G SL++M A+ +D A + M +V +W +++ HG G+
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME-PNVDLWETLMNLSRVHGDLILGDR 369
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI 456
+ Q+ S L+ S AGLV + D++ K Q M +YGI
Sbjct: 370 CQDMVEQLD------------ASRLNKESKAGLVP--VKSSDLVKEKLQRMAKGPNYGI 414
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 19 CVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVVLW 78
C Q L+ +++H F+ D+ +++IE+YS CG + DA+ VF P+ ++ W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 79 TSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG-RSIHGFV 137
++ + ++G E A+ FSR E PD AC L D G
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQ-EGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 138 KRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
K G+ + SL+ + + G + A + F E + +V W +++
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEA-LRFVESMEPNVDLWETLM 355
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
A C + + +H F+ + +S NS++ +Y GS++ A +F MP++++
Sbjct: 188 AQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNL 247
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG 231
+W ++ C+A NG +A+D F+ + +P+ AC + EG
Sbjct: 248 ETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 179/413 (43%), Gaps = 11/413 (2%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
PD +++++T + + G + AL++ +M + VS D V + +L D S
Sbjct: 188 PDRYTYSTLITSFGKEGMFDSALSWLQKMEQ-DRVSGDLVLYSNLIELSRRLCDYSKAIS 246
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV----ISWSSMLACYA 188
I +KR G+ L NS++N+YGK + A +L +EM + V +S+S++L+ Y
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT 248
+N AL +F EM + + T + ++E ++ E
Sbjct: 307 ENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVV 366
Query: 249 VSTALMDMYLKCSSPENAVDIFNRIPKKD----VVAWAVLFGGYAETGMAHKSMEVFCNM 304
++ +Y + A+ +F + +KD VV + + Y +T K+ + M
Sbjct: 367 SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 305 LSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSI 364
S G+ P+A+ I++ + G L +A L + SG + ++ + ++I Y + +
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
Query: 365 DNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+A ++ + D + + I G+ EEA +F Q ++K V F +++
Sbjct: 487 GHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISV-FGCMINL 545
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
S I +F+ M PDS ++++ G+ E ++A + M
Sbjct: 546 YSRNQRYVNVIEVFEKM-RTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 194/459 (42%), Gaps = 53/459 (11%)
Query: 7 PDSHTVSIALKS----------CVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSK 56
PD +T S + S LQK+E R + GD+ + S LIEL +
Sbjct: 188 PDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR----------VSGDLVLYSNLIELSRR 237
Query: 57 CGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV 112
+ + A+ +F + PD+V + S++ Y ++ A M E P
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM---NEAGVLPN 294
Query: 113 TLVSAASACAQLSDSKLGRSIHGFVK----RCGLDTHLSLANSLLNLYGKTGSIKSAEIL 168
T+ + + + K ++ F + C LD L+ N ++++YG+ +K A+ L
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD--LTTCNIMIDVYGQLDMVKEADRL 352
Query: 169 F---REMP-DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACAS 224
F R+M + +V+S++++L Y + A+ LF M K IE N VT + ++
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 225 ASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVA 280
E+ + Q S G E + ++ ++ K + A +F ++ D V
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 281 WAVLFGGYAETG-MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFV 339
+ + Y G M H +L + PD + +T +++ G ++A +
Sbjct: 473 YQTMIVAYERVGLMGHAK-----RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 340 TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA----YKDVVIWSSIIAAYGFHGQG 395
+SG + + +I +Y++ N +VF M + D + + ++ AYG +
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 396 EEALKLFYQMANHSDLKPNKVTF--ISILSACSHAGLVE 432
E+A ++ +M + P++V F +S+ S+ +VE
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVE 626
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/387 (18%), Positives = 152/387 (39%), Gaps = 44/387 (11%)
Query: 31 IHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYE 86
I LK+ + D+ +++I +Y K +A + E + P+ V ++++++ Y
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 87 RSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHL 146
+ AL+ F+ M + + D T QL K + +++ ++ ++
Sbjct: 307 ENHKFLEALSVFAEMKEVN-CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV 365
Query: 147 SLANSLLNLYGKTGSIKSAEILFREMPDKD----VISWSSMLACYADNGAATNALDLFNE 202
N++L +YG+ A LFR M KD V+++++M+ Y A +L E
Sbjct: 366 VSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQE 425
Query: 203 MIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMY----- 257
M + IEPN +T + + A L+ + Q S G E++ + ++ Y
Sbjct: 426 MQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGL 485
Query: 258 --------------------------LKCSSPENAVDIFNRIPK----KDVVAWAVLFGG 287
K E A +F + + KD+ + +
Sbjct: 486 MGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINL 545
Query: 288 YAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNN 347
Y+ +EVF M + G PD+ + +L A + ++A ++ + + G
Sbjct: 546 YSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFP 605
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGM 374
+ + ++ +Y+ + +F+ +
Sbjct: 606 DEVHFQMLSLYSSKKDFEMVESLFQRL 632
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 350 IGA--SLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+GA ++IEMY+ C S+D+A KVF M + ++ + +G GEEA+ LF +
Sbjct: 154 VGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKE 213
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+ KPN F + S C+ G V+EG F M +Y ++P EHY + +L G L
Sbjct: 214 EGN-KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 468 DRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLD 513
D AL+ + MPM+ VW L+ +H ++++G+ A+ + LD
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 104/254 (40%), Gaps = 13/254 (5%)
Query: 145 HLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMI 204
H NS++ Y T S A+ + E D I G A+++ + +
Sbjct: 63 HTLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCI-----------QGNWREAVEVLDYLE 111
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
+K + + L+ + C LE R +H+ ++ + A+++MY C S +
Sbjct: 112 NKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVD 171
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
+A+ +F +P+ + V+ + G +++++F +G +P+ ++ + +
Sbjct: 172 DALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCT 231
Query: 325 ELG-VLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA-NKVFRGMAYKDVVIW 382
G V + ++ A + G + S+ +M A +D A N V R V +W
Sbjct: 232 LTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVW 291
Query: 383 SSIIAAYGFHGQGE 396
+++ HG E
Sbjct: 292 ETLMNLSRVHGDVE 305
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 2/178 (1%)
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
D + L+ A C + + R +H + + N+++ +Y S+ A +F
Sbjct: 118 DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVF 177
Query: 170 REMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLE 229
EMP+ + + M+ C+ +NG A+DLF ++ +PN C ++
Sbjct: 178 EEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVK 237
Query: 230 EGR-KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLF 285
EG + + YG ++ M + A++ R+P + V W L
Sbjct: 238 EGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLM 295
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 171/381 (44%), Gaps = 21/381 (5%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PDVV + SIV G RSG LAL +M V D T + + +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD----VISWSSMLACY 187
S+ ++ G+ + + NSL+ K G +L ++M ++ VI+++ +L +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
G A +L+ EMI + I PN +T + + + L E + L V +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA----WAVLFGGYAETGMAHKSMEVFCN 303
T+L+ Y ++ + +F I K+ +VA +++L G+ ++G + E+F
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M+S GV PD + +L + + G L++A+ + + KS D + ++IE K
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 364 IDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+++A +F + K +V+ ++ +I+ G EA L +M + PN T+
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN-APNDCTYN 547
Query: 420 SILSA-------CSHAGLVEE 433
+++ A + A L+EE
Sbjct: 548 TLIRAHLRDGDLTASAKLIEE 568
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 206/485 (42%), Gaps = 55/485 (11%)
Query: 61 NDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVS 116
+DA+ +F E P P +V ++ + R+ L L F ++ L ++ + TL
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTLNI 128
Query: 117 AASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK- 175
+ + + S+ G V + G + + N+L+ G + A +L M +
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 176 ---DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
DV++++S++ +G + ALDL +M ++ ++ + T + + + ++
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA-- 246
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETG 292
A+S E+ET + K VV + L G + G
Sbjct: 247 -----AISLFKEMET------------------------KGIKSSVVTYNSLVRGLCKAG 277
Query: 293 MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA 352
+ + +M+S + P+ + +L + G LQ+A L+ + G N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 353 SLIEMYAKCSSIDNANKVF----RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANH 408
+L++ Y + + AN + R D+V ++S+I Y + ++ +K+F ++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 409 SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELD 468
L N VT+ ++ +G ++ +F MV+ + ++PD YGI++D L G+L+
Sbjct: 398 G-LVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLE 455
Query: 469 RALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVA-AKNLF------PLDPNHAGYYT 521
+AL+I + +Q G ++ I K G+V A NLF + PN Y
Sbjct: 456 KALEIFED--LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 522 LLSNI 526
++S +
Sbjct: 514 MISGL 518
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 144/338 (42%), Gaps = 13/338 (3%)
Query: 35 LKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGYERSGT 90
+++ N+ D+F S +I+ + G ++ A+ +F E K VV + S+V G ++G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
M V E+ P+ +T + + ++ + G+ ++ N
Sbjct: 279 WNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 151 SLLNLYGKTGSIKSA----EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDK 206
+L++ Y + A +++ R D+++++S++ Y + + +F + +
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 207 RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENA 266
+ N VT ++ + ++ ++ Q VS+G + L+D E A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 267 VDIFNRIPKKD----VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTA 322
++IF + K +V + + G + G + +FC++ GV+P+ + +++
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 323 ISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
+ + G L +A L + + G N+ +LI + +
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 18/301 (5%)
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV 177
A A+ +D + + + + + ++ N LL ++ G + +F MP +D
Sbjct: 95 AKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDF 154
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIE-----PNWVTLVSALRACASASYLEEGR 232
SW+ + + G +A LF M+ + P+W+ L L+ACA E G+
Sbjct: 155 HSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI-LGCVLKACAMIRDFELGK 213
Query: 233 KIHQLAVSYGF--ELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAE 290
++H L GF E ++ +S +L+ Y + E+A + +++ + VAWA
Sbjct: 214 QVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYR 273
Query: 291 TGMAHKSMEVFCNMLSDGVRPDAVALVKILTA---ISELGVLQQAVCLHAFVTKSGFDNN 347
G + + F M + G++ + +L A +S+ G Q V HA K GF+++
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQV--HANAIKLGFESD 331
Query: 348 EYIGASLIEMYAKCSSIDNANKVFRGMAYKD---VVIWSSIIAAYGFHGQGEEALKLFYQ 404
I LIEMY K + +A KVF+ + KD V W++++A+Y +G EA+KL YQ
Sbjct: 332 CLIRCRLIEMYGKYGKVKDAEKVFK--SSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQ 389
Query: 405 M 405
M
Sbjct: 390 M 390
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 121/270 (44%), Gaps = 11/270 (4%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSP 109
L+ ++ CG ++ ++F P D W + G G E A F M +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 110 DPV---TLVSAASACAQLSDSKLGRSIHGFVKRCGL----DTHLSLANSLLNLYGKTGSI 162
+ L ACA + D +LG+ +H + G D++LS SL+ YG+ +
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLS--GSLIRFYGEFRCL 246
Query: 163 KSAEILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRAC 222
+ A ++ ++ + + ++W++ + G + F EM + I+ N + L+AC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 223 ASAS-YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA- 280
+ S G+++H A+ GFE + + L++MY K ++A +F + V+
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
W + Y + G+ +++++ M + G++
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 9 SHTVSIALKSCVGLQKLEVGRMIH------GFLKKENLDGDMFVGSALIELYSKCGEMND 62
S + LK+C ++ E+G+ +H GF+ +E D ++ +LI Y + + D
Sbjct: 193 SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE----DSYLSGSLIRFYGEFRCLED 248
Query: 63 AVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
A V + + V W + VT R G + + F M + + + AC+
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGN-HGIKKNVSVFSNVLKACS 307
Query: 123 QLSDS-KLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVIS-W 180
+SD + G+ +H + G ++ + L+ +YGK G +K AE +F+ D+ +S W
Sbjct: 308 WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 181 SSMLACYADNGAATNALDLFNEM 203
++M+A Y NG A+ L +M
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQM 390
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSD 307
T L+ M++ C + +F+R+P +D +WA++F G E G + +F +ML
Sbjct: 124 TFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKH 183
Query: 308 GVR-----PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE--YIGASLIEMYAK 360
+ P + L +L A + + + +HA K GF + E Y+ SLI Y +
Sbjct: 184 SQKGAFKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGE 242
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
+++AN V ++ + V W++ + G+ +E ++ F +M NH +K N F +
Sbjct: 243 FRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHG-IKKNVSVFSN 301
Query: 421 ILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHY--GIMVDLLGRMGELDRALDIINNMP 478
+L ACS + + G + + N +L +S+ ++++ G+ G++ A + +
Sbjct: 302 VLKACS--WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSK 359
Query: 479 MQAGPHVWGALLGA 492
+ W A++ +
Sbjct: 360 DETSVSCWNAMVAS 373
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 194/441 (43%), Gaps = 55/441 (12%)
Query: 49 ALIELYSKCGEMNDAVEVF-------MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRM 101
+LI + + GEM++A+EV + YP + V +++++G+ + G PELAL FF
Sbjct: 139 SLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFV-CSAVISGFCKIGKPELALGFFESA 197
Query: 102 AVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS 161
+ P+ VT + SA QL R + ++ G + ++ ++ Y K G+
Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGA 257
Query: 162 IKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
+ A + REM +K DV+S+S ++ + G AL L +MI + +EPN +T +
Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA 317
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
+R LEE + +S G E++ + L+D
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID---------------------- 355
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHA 337
G G +++ + +M G++P + ++ + G + +A
Sbjct: 356 ---------GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----D 402
Query: 338 FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHG 393
V+K G + ++L++ Y K +ID ++ R D+V+ + ++ A+ G
Sbjct: 403 EVSK-GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 394 QGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEH 453
EA L+ M DL P+ T+ +++ G +EE + +F+ + + + +
Sbjct: 462 AYGEADALYRAMP-EMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL--RKSSVSAAVC 518
Query: 454 YGIMVDLLGRMGELDRALDII 474
Y ++D L + G LD A +++
Sbjct: 519 YNRIIDALCKKGMLDTATEVL 539
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 264 ENAVDIFNRIPKKDV------VAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR-PDAVAL 316
+NA+++ + K+V + + G+ + G ++ F + + GV P+ V
Sbjct: 151 DNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTY 210
Query: 317 VKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAY 376
+++A+ +LG + + L + GF+ + ++ I Y K ++ +A R M
Sbjct: 211 TTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE 270
Query: 377 K----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVE 432
K DVV +S +I G EEAL L +M ++PN +T+ +I+ G +E
Sbjct: 271 KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG-VEPNLITYTAIIRGLCKMGKLE 329
Query: 433 EGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
E +F+ +++ + D Y ++D + R G L+RA ++ +M +
Sbjct: 330 EAFVLFNRILS-VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG 377
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 100/517 (19%), Positives = 205/517 (39%), Gaps = 84/517 (16%)
Query: 31 IHGFLK---------------KENLDGDMFVGSALIELYSKCGEMNDAV----EVFMEYP 71
IHG+ K ++ ++ D+ S LI+ SK G + +A+ ++ E
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+P+++ +T+I+ G + G E A F+R+ + + D V+ + +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG-IEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNG 191
S+ G +++ G+ + N+++N G + A+ + + + DVI++S++L Y
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG-DVITYSTLLDSYIKVQ 426
Query: 192 AATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVST 251
L++ ++ +I + V L+A E +++ +T
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYA 486
Query: 252 ALMDMYLKCSSPENAVDIFNRIPKKDV---VAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
++ Y K E A+++FN + K V V + + + GM + EV + G
Sbjct: 487 TMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 309 VRPD-------------------AVALVKILTAISE---LGVLQQAVCL----------- 335
+ D + LV L ++ LG+L A+ L
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 336 ---------------HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV 380
+ + K+ DN + A L+ + A +++ + DV+
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM----------DVI 656
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDI 440
++ II G +AL L A + N +T+ S+++ G + E + +FD
Sbjct: 657 DYTIIINGLCKEGFLVKALNL-CSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 441 MVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ N L+P YGI++D L + G A ++++M
Sbjct: 716 LEN-IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/413 (18%), Positives = 169/413 (40%), Gaps = 20/413 (4%)
Query: 42 GDMFVGSALIELYSKCGEMNDAVEV---FMEYPKP-DVVLWTSIVTGYERSGTPELALAF 97
GD+ S L++ Y K ++ +E+ F+E P D+V+ ++ + G A A
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 98 FSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYG 157
+ M ++ ++PD T + + + + +++ + + N +++
Sbjct: 470 YRAMPEMD-LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCY-NRIIDALC 527
Query: 158 KTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
K G + +A + E+ +K D+ + ++L NG L L + +
Sbjct: 528 KKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFN-- 271
L A+ E +++ + G + T ST L + S + + + N
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTV-TFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 272 --RIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVL 329
+ DV+ + ++ G + G K++ + S GV + + ++ + + G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 330 QQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSI 385
+A+ L + G +E LI+ K +A K+ M K +++I++SI
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 386 IAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIF 438
+ Y GQ E+A+++ + + P+ T S++ G +EE +++F
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKM-MGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 226/521 (43%), Gaps = 58/521 (11%)
Query: 8 DSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE-- 65
D +T SI + +L + + + K + D+ S+L+ Y ++DAV
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 66 ---VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
V M Y KPD +T+++ G A+A +M V PD VT + +
Sbjct: 177 DQMVEMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLC 234
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVI 178
+ D L S+ +++ ++ + + N++++ K + A LF EM +K DV
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
++SS+++C + G ++A L ++MI+++I PN VT + + A L E K++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD----VVAWAVLFGGYAETGMA 294
+ + + ++L++ + + A +F + KD VV ++ L G+ +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 295 HKSME-----------------------------------VFCNMLSDGVRPDAVALVKI 319
+ ME VF M+S GV P+ + +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 320 LTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-- 377
L + + G L +A+ + ++ +S + + Y +IE K +++ ++F ++ K
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 378 --DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGI 435
+V+ ++++I+ + G EEA L +M L PN T+ +++ A G E
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASA 593
Query: 436 TIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA-LDIIN 475
+ M D+ G++ ++L G LD++ LD+++
Sbjct: 594 ELIKEM-RSCGFAGDASTIGLVTNMLHD-GRLDKSFLDMLS 632
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/478 (18%), Positives = 200/478 (41%), Gaps = 53/478 (11%)
Query: 59 EMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+++DAV++F + P P +V + +++ + EL ++ +M L +S D T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTY 121
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+ + S L ++ + + G + + +SLLN Y + I A L +M +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 175 ----KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
D ++++++ + A+ A+ L ++M+ + +P+ VT + + ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFG 286
+ + E + + ++D K ++A+++F + K DV ++ L
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
G + + +M+ + P+ V ++ A + G L +A L+ + K D
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKD----VVIWSSIIAAYGFHGQGEEALKLF 402
+ + +SLI + +D A +F M KD VV +S++I + + EE ++LF
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 403 YQMANHS----------------------------------DLKPNKVTFISILSACSHA 428
+M+ + PN +T+ +L
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 429 GLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPHV 485
G + + + +F+ + + + PD Y IM++ + + G+++ ++ N+ ++ P+V
Sbjct: 482 GKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 185/429 (43%), Gaps = 55/429 (12%)
Query: 48 SALIELYSKCGEMNDAVE-----VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
S+L+ Y ++DAV V M Y +PD + +T+++ G A+A RM
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRM- 216
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
V P+ VT + + D+ L ++ ++ ++ + + N++++ K +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 163 KSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
A LF+EM K +V+++SS+++C G ++A L ++MI+K+I PN VT +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 219 LRACASASYLEEGRKIHQLAVSY--------------GFELETTVSTA------------ 252
+ A E K++ + GF + + A
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 253 ---------LMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSME 299
L+ + K E+ ++F + + D V + L G G + +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
VF M+SDGV PD + +L + G L++A+ + ++ KS + YI ++IE
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 360 KCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
K +D+ +F ++ K +VV ++++I+ +EA L +M L PN
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNS 575
Query: 416 VTFISILSA 424
T+ +++ A
Sbjct: 576 GTYNTLIRA 584
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 225/515 (43%), Gaps = 37/515 (7%)
Query: 59 EMNDAVEVF----MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+++DA+ +F P P +V + +++ + ++ ++ +M LE V
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 115 VSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD 174
+ C + S L ++ G + + G + + +SLLN Y I A L +M +
Sbjct: 125 ILINCFCRR-SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 175 ----KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEE 230
D I++++++ + A+ A+ L + M+ + +PN VT + +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 231 GRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFG 286
+ + E + + ++D K ++A+++F + K +VV ++ L
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
G + ++ +M+ + P+ V ++ A + G +A L+ + K D
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKD----VVIWSSIIAAYGFHGQGEEALKLF 402
+ + SL+ + +D A ++F M KD VV ++++I + + E+ +LF
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLG 462
+M+ H L + VT+ +++ H G + +F MV+ + PD Y I++D L
Sbjct: 424 REMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLC 481
Query: 463 RMGELDRALDIINNMP---MQAGPHVWGALL-GACHIHHNIKMGEV-------AAKNLFP 511
G+L++AL++ + M ++ +++ ++ G C K G+V + +L
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC------KAGKVDDGWDLFCSLSLKG 535
Query: 512 LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKEN 546
+ PN Y T++S + C + A L +KE+
Sbjct: 536 VKPNVVTYNTMISGL-CSKRLLQEAYALLKKMKED 569
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 136/299 (45%), Gaps = 25/299 (8%)
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
+F M+ P V K+L+AI+++ + L + + + Y LI +
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 360 KCSSIDNA----NKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
+ S I A K+ + +V SS++ Y + +A+ L QM +P+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDT 190
Query: 416 VTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIIN 475
+TF +++ E + + D MV + P+ YG++V+ L + G+ D AL+++N
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 476 NM---PMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFP------LDPNHAGYYTLLSNI 526
M ++A ++ ++ + + ++ A NLF + PN Y +L+S +
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVD----DALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 527 YCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRK 585
C W +A++L S + ++K + ++V + +FV +F E++++++ + K
Sbjct: 306 -CSYGRWSDASQLLS----DMIEKKINPNLVTFNALIDAFVKEGKFV-EAEKLYDDMIK 358
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 162/376 (43%), Gaps = 31/376 (8%)
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNA 196
G S + +LN ++ A +LF EM DV +++ M+ + G A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
FNEM + PN VT + + A A + ++ + +S G +AL+D
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 257 YLKCSSPENAVDIFNR------IP--------------KKDVVAWAVLFGGYAETGMAHK 296
+ K E A IF R +P + +VV + L G+ ++ +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
+ ++ M +G P+ + ++ + ++G L +A + +++ GF Y +SLI+
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 357 MYAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
Y K D A+KV M +VVI++ +I G+ +EA KL QM +
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQ 776
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
PN VT+ +++ G +E + + + M +K + P+ Y +++D + G LD A +
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 473 IINNMPMQAGP-HVWG 487
++ M P H G
Sbjct: 836 LLEEMKQTHWPTHTAG 851
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 120/580 (20%), Positives = 224/580 (38%), Gaps = 79/580 (13%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RP T + +++ + +L+ +IH + NL D F K G+ +A+
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 66 -VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
V E PD V +T +++G + E A+ F +RM S P + + C L
Sbjct: 292 LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM---RATSCLPNVVTYSTLLCGCL 348
Query: 125 SDSKLGR--SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFRE------MPDKD 176
+ +LGR + + G + NSL++ Y +G A L ++ MP
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 177 VISWSSMLACYADNGAATNALDL----FNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
V + C + + LDL ++EM+ + N + + S R SA E+
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGY 288
+ + + GF +T+ + +++ S E A +F + + DV + ++ +
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+ G+ ++ + F M G P+ V
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTY-------------------------------- 556
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFHGQGEEALKLFYQ 404
+LI Y K + AN++F M ++V +S++I + GQ E+A ++F +
Sbjct: 557 ---TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 405 MANHSDL---------------KPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
M D+ +PN VT+ ++L + VEE + D M + P
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEP 672
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNL 509
+ Y ++D L ++G+LD A ++ M P + +K ++A+K L
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 510 FPLDPNHAG----YYTLLSNIYCVDKNWHNAAKLRSLIKE 545
+ N YT + + C A KL +++E
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 196/458 (42%), Gaps = 44/458 (9%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPKP----DVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+ LI+LY K G +NDA +F E K D V + +++ G A + +M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM-- 366
Query: 104 LEE--VSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGS 161
EE +SPD T S A D + + +++ GL ++L++ +
Sbjct: 367 -EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 162 IKSAEILFREMPDKDVI-----SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLV 216
+ E + EM D++ I S ++ Y + G A LF +R + + V L
Sbjct: 426 VAEVEAVIAEM-DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-----ERFQLDCV-LS 478
Query: 217 SALRACASASYLEEGRKIHQLAVSYGFE---------LETTVSTALMDMYLKCSSPENAV 267
S A Y E+G + V YG LE V ++ Y K E A+
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNV---MIKAYGKAKLHEKAL 535
Query: 268 DIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
+F + + D + LF A + ++ + ML G +P ++ +
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV---- 379
LG+L AV L+ + K+G NE + SLI +A+ ++ A + FR M V
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFD 439
++ +S+I AY G EEA +++ +M + S+ P+ S+LS C+ G+V E +IF+
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKD-SEGGPDVAASNSMLSLCADLGIVSEAESIFN 714
Query: 440 IMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ K D + M+ L MG LD A+++ M
Sbjct: 715 ALREKGTC--DVISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 168/374 (44%), Gaps = 48/374 (12%)
Query: 48 SALIELYSKCGEMNDAVEVF--MEYP--KPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+A+I Y + G ++DAV+++ ME KP+ V++ S++ G+ SG E A+ +F RM
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMME 647
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
V + + L S A +++ + R ++ +K ++ +NS+L+L G +
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 164 SAEILFREMPDK---DVISWSSML-----------------------------------A 185
AE +F + +K DVIS+++M+ A
Sbjct: 708 EAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Query: 186 CYADNGAATNALDLFNEM-IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
CYA +G + +LF+EM +++++ +W T + E Q A +
Sbjct: 768 CYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKP 827
Query: 245 LETTVSTALM--DMYLKCSSPENAVDIFN-RIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
L T TA + M L + E+ ++ + IP++ AV++ Y+ +G +++ +
Sbjct: 828 LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIY-TYSASGDIDMALKAY 886
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M G+ PD V ++ + G+++ +H+ +T + ++ + ++ + Y
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
Query: 362 SSIDNANKVFRGMA 375
+ D A+ V + M+
Sbjct: 947 NRQDLADVVKKEMS 960
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 156/384 (40%), Gaps = 52/384 (13%)
Query: 138 KRCGLDTHLSLAN--SLLNLYGKTGSIKSAEILF---REMPDK--DVISWSSMLACYADN 190
+R LD LS +++++Y + G AE +F R M + DV+ ++ M+ Y
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKA 528
Query: 191 GAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVS 250
AL LF M ++ P+ T S + A ++E ++I + G +
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDV----VAWAVLFGGYAETGMAHKSMEVFCNMLS 306
A++ Y++ +AVD++ + K V V + L G+AE+GM ++++ F M
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GV+ + + L ++ A S++G L++A ++ + S + S++ + A +
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSE 708
Query: 367 ANKVF---------------------RGMAYKDVVI-----------------WSSIIAA 388
A +F +GM D I ++ ++A
Sbjct: 709 AESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 389 YGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLM 448
Y GQ E +LF++M L + TF ++ + G+ E ++ N+ + +
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPL 828
Query: 449 PDSEHYGIMVDLLGRMGELDRALD 472
I L MG AL+
Sbjct: 829 ATP---AITATLFSAMGLYAYALE 849
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 15/324 (4%)
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
++++++ Y G +A +LF+EM+ + + VT + + C + +L E + +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMA 294
G +T L+ ++ E A++ + +I K D V + + M
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
+ V M + +R D ++ I+ G++ QA L ++ + A++
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAV 485
Query: 355 IEMYAKCSSIDNANKVFRGM-----AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
I++YA+ A VF G DV+ ++ +I AYG E+AL LF M N
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 410 DLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDR 469
P++ T+ S+ + LV+E I M++ P + Y M+ R+G L
Sbjct: 546 TW-PDECTYNSLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSD 603
Query: 470 ALDIINNMP---MQAGPHVWGALL 490
A+D+ M ++ V+G+L+
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLI 627
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 50/387 (12%)
Query: 147 SLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNE 202
S N+L++LYGK G + A LF EM D +++++M+ +G + A L +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 203 MIDKRIEPNWVTLVSALRACASA----SYLEEGRKIHQLAV-----------------SY 241
M +K I P+ T L A A + LE RKI ++ +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 242 GFELETTVS--------------TALMDMYLKCSSPENAVDIFNRIPKKDVVA---WAVL 284
E+E ++ +M MY+ A +F R V++ A +
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 285 FGGYAETGMAHKSMEVFCNMLS-DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
YAE G+ ++ VF + G R D + ++ A + + ++A+ L + G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFHGQGEEAL 399
+E SL +M A +D A ++ M ++++IA+Y G +A+
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 400 KLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVD 459
L Y+ + +KPN+V + S+++ + +G+VEE I F +M ++ + + ++
Sbjct: 606 DL-YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM-EEHGVQSNHIVLTSLIK 663
Query: 460 LLGRMGELDRALDIINNMP-MQAGPHV 485
++G L+ A + + M + GP V
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDV 690
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 170/366 (46%), Gaps = 15/366 (4%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PD V +T++V G + A+A RM V++ PD VT + + + + L
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACY 187
++ +++ ++ + + N++++ K + A LF +M K DV +++ +++C
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+ G ++A L ++M++K I P+ V + + A L E K++ V
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 248 TVS-TALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFC 302
V+ L+ + K E +++F + ++ + V + L G+ + + VF
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
M+SDGV PD + +L + G ++ A+ + ++ K + ++IE K
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 363 SIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+++ +F ++ K +VV ++++++ + G EEA LF +M L PN T+
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTY 534
Query: 419 ISILSA 424
+++ A
Sbjct: 535 NTLIRA 540
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 173/397 (43%), Gaps = 16/397 (4%)
Query: 94 ALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
A+ F M V P V SA A+++ L S+ ++ G+ +L + +
Sbjct: 59 AIGLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 154 NLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
N + + + A + +M +++ +S+L + + A+ L ++M++ +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
P+ VT + + + E + + V G + + A+++ K P+ A+++
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 270 FNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISE 325
N++ K DVV + + G + + ++F M + G++PD +++ +
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 326 LGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM-----AYKDVV 380
G A L + + + + + +LI+ + K + A K++ M + DVV
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDI 440
++++I + + + EE +++F +M+ L N VT+ +++ A + +F
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 441 MVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
MV+ + PD Y I++D L G ++ AL + M
Sbjct: 417 MVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 182/407 (44%), Gaps = 19/407 (4%)
Query: 43 DMFVGSALIE---LYSKCGEMNDAVEVFMEYP-KPDVVLWTSIVTGYERSGTPELALAFF 98
D F + LI L++K E V+ ++ +PD+V + ++V G + G +LAL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK 158
++M + + V + + + ++ + ++ G+ ++ NSL+N
Sbjct: 247 NKMEA-ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 159 TGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
G A L M +K +V+++++++ + G A L EMI + I+P+ +T
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+ + L+E +++ + VS L++ + KC E+ V++F +
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 275 KK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
++ + V + + G+ + G + VF M+S+ V D + +L + G L
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK-DVVIWSSIIAAY 389
A+ + ++ KS + N +I ++IE K + A +F ++ K DVV ++++I+
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL 545
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA----CSHAGLVE 432
+EA LF +M L PN T+ +++ A C A E
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLIRANLRDCDRAASAE 591
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 142/315 (45%), Gaps = 12/315 (3%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
D+ ++S + C+ + AL + +M+ EP+ VTL S L + + + +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 236 QLAVSYGFELET-TVSTALMDMYL--KCSSPENAVD-IFNRIPKKDVVAWAVLFGGYAET 291
V G++ +T T +T + ++L K S VD + R + D+V + + G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G ++ + M + ++ + V I+ ++ + ++ AV L + G N
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
SLI +A+++ M K +VV ++++I A+ G+ EA KL +M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 408 HSDLKPNKVTFISILSA-CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
S + P+ +T+ +++ C H L +E +F MV+K +P+ + Y +++ +
Sbjct: 357 RS-IDPDTITYNLLINGFCMHNRL-DEAKQMFKFMVSK-DCLPNIQTYNTLINGFCKCKR 413
Query: 467 LDRALDIINNMPMQA 481
++ +++ M +
Sbjct: 414 VEDGVELFREMSQRG 428
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T ++ + +L+ + + F+ ++ ++ + LI + KC + D VE+
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 67 FMEYPKP----DVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
F E + + V +T+I+ G+ ++G + A F +M V V D +T
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLC 479
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK-DVISWS 181
I ++++ ++ ++ + N+++ K G + A LF + K DV++++
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 182 SMLACYADNGAATNALDLFNEMIDKRIEPN---WVTLVSA-LRAC---ASASYLEEGR 232
+M++ A DLF +M + PN + TL+ A LR C ASA ++E R
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 184/429 (42%), Gaps = 55/429 (12%)
Query: 48 SALIELYSKCGEMNDAVE-----VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
S+L+ Y ++DAV V M Y +PD + +T+++ G A+A RM
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRM- 141
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
V P+ VT + + D L ++ ++ ++ + + N++++ K +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 163 KSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
A LF+EM K +V+++SS+++C G ++A L ++MI+K+I PN VT +
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 219 LRACASASYLEEGRKIHQLAVSY--------------GFELETTVSTA------------ 252
+ A E K+H + GF + + A
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 253 ---------LMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSME 299
L+ + K E+ ++F + + D V + L G G + +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
VF M+SDGV PD + +L + G L++A+ + ++ KS + YI ++IE
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 360 KCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
K +D+ +F ++ K +VV ++++I+ +EA L +M L P+
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDS 500
Query: 416 VTFISILSA 424
T+ +++ A
Sbjct: 501 GTYNTLIRA 509
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/499 (20%), Positives = 216/499 (43%), Gaps = 33/499 (6%)
Query: 71 PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLG 130
P P + + +++ + +L ++ +M L +S + T + + S L
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLA 64
Query: 131 RSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLAC 186
++ G + + G + + +SLLN Y I A L +M + D I++++++
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ A+ A+ L + M+ + +PN VT + ++ + + E +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFC 302
+ ++D K ++A+++F + K +VV ++ L G + ++
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
+M+ + P+ V ++ A + G +A LH + K D + + SLI +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 363 SIDNANKVFRGMAYKDVV----IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+D A ++F M KD ++++I + + E+ +LF +M+ H L + VT+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTY 363
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+++ H G + +F MV+ + PD Y I++D L G+L++AL++ + M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 479 ---MQAGPHVWGALL-GACHIHHNIKMGEV-------AAKNLFPLDPNHAGYYTLLSNIY 527
++ +++ ++ G C K G+V + +L + PN Y T++S +
Sbjct: 423 KSEIKLDIYIYTTMIEGMC------KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL- 475
Query: 528 CVDKNWHNAAKLRSLIKEN 546
C + A L +KE+
Sbjct: 476 CSKRLLQEAYALLKKMKED 494
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 129/280 (46%), Gaps = 22/280 (7%)
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
P K+L+AI+++ + L + + G +N Y LI + + S I A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 371 FRGM---AYK-DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
M Y+ +V SS++ Y + +A+ L QM +P+ +TF +++
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLF 126
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM---PMQAGP 483
E + + D MV + P+ YG++V+ L + G++D A +++N M ++A
Sbjct: 127 LHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 484 HVWGALLGACHIHHNIKMGEVAAKNLFP------LDPNHAGYYTLLSNIYCVDKNWHNAA 537
++ ++ + + ++ A NLF + PN Y +L+S + C W +A+
Sbjct: 186 VIFNTIIDSLCKYRHVD----DALNLFKEMETKGIRPNVVTYSSLISCL-CSYGRWSDAS 240
Query: 538 KLRSLIKENRLKK--VLGQSMVELKNEVHSFVASDRFHDE 575
+L S + E ++ V ++++ + FV +++ HD+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 16/296 (5%)
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
+++EV + G D L+ + E+ L++A +H +T D Y ++
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP--LDARSY--HTV 149
Query: 355 IEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
IEMY+ C S D+A VF M ++ W ++I +G+GE A+ +F + + KP+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGN-KPD 208
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
K F ++ AC G + EG+ F+ M Y ++ E Y ++++L G LD ALD +
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 475 NNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWH 534
M ++ +W L+ C + +++G+ A+ + LD A + SN V
Sbjct: 269 ERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD---ASRMSKESNAGLVAAKAS 325
Query: 535 NAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKM 590
++A + +KE R +++ + K +H F A D H + F R L V+M
Sbjct: 326 DSAMEK--LKELRYCQMIRD---DPKKRMHEFRAGDTSHLGTVSAF---RSLKVQM 373
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 196 ALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMD 255
AL++ + + DK ++ L+ + C LEE R +H L+ +++
Sbjct: 96 ALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVIE 151
Query: 256 MYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVA 315
MY C S ++A+++FN +PK++ W + A+ G +++++F + +G +PD
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 316 LVKILTAISELGVLQQAVCLH--AFVTKSG--FDNNEYIGASLIEMYAKCSSIDNA-NKV 370
+ A +G + + + LH + G +Y+ ++IEM A C +D A + V
Sbjct: 212 FKAVFFACVSIGDINEGL-LHFESMYRDYGMVLSMEDYV--NVIEMLAACGHLDEALDFV 268
Query: 371 FRGMAYKDVVIWSSII 386
R V +W +++
Sbjct: 269 ERMTVEPSVEMWETLM 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Query: 114 LVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
L+ A C ++ + R +H + ++ ++++ +Y S A +F EMP
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMP 170
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEG-R 232
++ +W +M+ C A NG A+D+F I++ +P+ + AC S + EG
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP-KKDVVAWAVLFG----- 286
+ YG L +++M C + A+D R+ + V W L
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 287 GYAETG 292
GY E G
Sbjct: 291 GYLELG 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 44/224 (19%)
Query: 17 KSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPKPDVV 76
K C ++ LE R++H + LD + +IE+YS C +DA+ VF E PK +
Sbjct: 120 KLCGEVEALEEARVVHDCITP--LDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSE 175
Query: 77 LWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF 136
W +++ ++G E A+ F+R + E PD + AC + D G +H
Sbjct: 176 TWGTMIRCLAKNGEGERAIDMFTRF-IEEGNKPDKEIFKAVFFACVSIGDINEG-LLH-- 231
Query: 137 VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSMLACYADNGAATNA 196
++Y G + S E D ++ MLA G A
Sbjct: 232 ---------------FESMYRDYGMVLSME---------DYVNVIEMLAAC---GHLDEA 264
Query: 197 LDLFNEMIDKRIEPN---WVTLVSALRACASASYLEEGRKIHQL 237
LD M +EP+ W TL++ C YLE G + +L
Sbjct: 265 LDFVERMT---VEPSVEMWETLMN---LCWVQGYLELGDRFAEL 302
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 173/385 (44%), Gaps = 16/385 (4%)
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
P +V+++ +++ + G A DLF M + IEP+ + + + A L G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGY 288
K+ A+ G +L+ V ++ +D+Y+K A ++ R+ +VV + +L G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+ G +++ ++ +L G+ P V ++ + G L+ L+ + K G+ +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQ 404
I L++ +K + +A + M + +VV+++S+I + + +EALK+F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 405 MANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRM 464
M + +KP+ TF +++ G +EE + +F M K L PD+ Y ++D +
Sbjct: 522 MGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMF-KMGLEPDALAYCTLIDAFCKH 579
Query: 465 GELDRAL---DIINNMPMQAGPHVWGALLGACHIHHNIKMGEVAAKNLF--PLDPNHAGY 519
+ L D++ + A V ++ H I+ NL ++P+ Y
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 520 YTLLSNIYCVDKNWHNAAKLRSLIK 544
T++ YC + A ++ L+K
Sbjct: 640 NTMICG-YCSLRRLDEAERIFELLK 663
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 191/446 (42%), Gaps = 21/446 (4%)
Query: 49 ALIELYSKCGEMNDAVEVF--MEYP--KPDVVLWTSIVTGYERSGTPELALAFFSRMAVL 104
LI + K GEM+ A ++F ME +PD++ +++++ GY ++G + FS+ A+
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ-ALH 349
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
+ V D V S + D ++ + G+ ++ L+ + G I
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 165 A-----EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSAL 219
A +IL R M + ++++SS++ + G + L+ +MI P+ V +
Sbjct: 410 AFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 220 RACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP----K 275
+ + + + L V +L+D + + + + A+ +F + K
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 276 KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCL 335
DV + + G +++ +F M G+ PDA+A ++ A + + L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 336 HAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF----RGMAYKDVVIWSSIIAAYGF 391
+ ++ + + +I + KC I++A+K F G D+V ++++I Y
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 392 HGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
+ +EA ++F ++ + PN VT ++ ++ I +F IM K P++
Sbjct: 649 LRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNA 706
Query: 452 EHYGIMVDLLGRMGELDRALDIINNM 477
YG ++D + +++ + + M
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEM 732
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 180/447 (40%), Gaps = 56/447 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T +I +K ++ ++G + K ++ + S+LI+ + KCG + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 67 F-----MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+ M YP PDVV++ +V G + G A+ F +M
Sbjct: 449 YEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKM-------------------- 487
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP----DKDV 177
LG+SI ++ + NSL++ + + A +FR M DV
Sbjct: 488 -------LGQSIR---------LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
++++++ G AL LF M +EP+ + + + A G ++ L
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGM 293
+ V ++ + KC E+A FN + + D+V + + GY
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 294 AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGAS 353
++ +F + P+ V L ++ + + + A+ + + + + G N
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 354 LIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
L++ ++K I+ + K+F M K +V +S II G+ +EA +F+Q A +
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDA 770
Query: 410 DLKPNKVTF-ISILSACSHAGLVEEGI 435
L P+ V + I I C LVE +
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAAL 797
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 129/317 (40%), Gaps = 48/317 (15%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVF----MEYPKPDVVLWTSIVTGYERSGTPELALAFF 98
++ V ++LI+ + + ++A++VF + KPDV +T+++ G E AL F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK 158
RM + + PD + + A + +G + ++R + +++ N +++L K
Sbjct: 555 FRMFKMG-LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 159 TGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
I+ A F + + D++++++M+ Y A +F + PN VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
L + + ++ ++ + G + LMD + K E + +F +
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 275 KK---------------------------------------DVVAWAVLFGGYAETGMAH 295
+K DVVA+A+L GY + G
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 296 KSMEVFCNMLSDGVRPD 312
++ ++ +ML +GV+PD
Sbjct: 794 EAALLYEHMLRNGVKPD 810
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 217/502 (43%), Gaps = 32/502 (6%)
Query: 1 MHATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALI---ELYSKC 57
+H + P IAL + + K V I + + L ++ + L+ Y
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS 182
Query: 58 GEMNDAVEVFMEYPKPDVVL----WTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPV- 112
++ A EVF + K V L + +V GY G E AL RM +V+PD V
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVT 242
Query: 113 --TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA----E 166
T++ A S +LSD K + +K+ GL + N+L+ Y K GS+K A E
Sbjct: 243 YNTILKAMSKKGRLSDLK---ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 167 ILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASAS 226
++ + D+ +++ ++ + G+ L+L + M +++P+ VT + + C
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 227 YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE-------NAVDIFNRIPKKDVV 279
E RK+ + + G + + K E VD+ P D+V
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP--DIV 417
Query: 280 AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFV 339
+ L Y + G ++E+ M G++ + + L IL A+ + L +A L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 340 TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMA----YKDVVIWSSIIAAYGFHGQG 395
K GF +E +LI + + ++ A +++ M V ++S+I HG+
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYG 455
E A++ F ++A S L P+ TF SI+ G VE+ ++ + K+ PD+
Sbjct: 538 ELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI-KHSFKPDNYTCN 595
Query: 456 IMVDLLGRMGELDRALDIINNM 477
I+++ L + G ++AL+ N +
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTL 617
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 186/444 (41%), Gaps = 20/444 (4%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD+ T + LK+ +L + + +KK L + + L+ Y K G + +A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 67 FMEYPK-----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+E K PD+ + ++ G +G+ L M L+ + PD VT + C
Sbjct: 298 -VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGC 355
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD-----KD 176
+L S R + ++ G+ + N L K ++ +E+ D D
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
++++ +++ Y G + AL++ EM K I+ N +TL + L A L+E +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETG 292
A GF ++ L+ + + E A+++++ + K V + L GG G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 293 MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA 352
+ME F + G+ PD I+ + G +++A + K F + Y
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 353 SLIEMYAKCSSIDNANKVFRGMAYK---DVVIWSSIIAAYGFHGQGEEALKLFYQMANHS 409
L+ K + A F + + D V ++++I+A+ + +EA L +M
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 410 DLKPNKVTFISILSACSHAGLVEE 433
L+P++ T+ S +S G + E
Sbjct: 656 -LEPDRFTYNSFISLLMEDGKLSE 678
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 203/467 (43%), Gaps = 55/467 (11%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE---- 65
+T SI + +L + + + K + D+ ++L+ + ++DAV
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 66 -VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
V M Y +PD + +++ G R A+A RM V++ PD VT + +
Sbjct: 177 MVEMGY-QPDSFTFNTLIHGLFRHNRASEAVALVDRM-VVKGCQPDLVTYGIVVNGLCKR 234
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISW 180
D L S+ +++ ++ + + N++++ ++ A LF EM +K +V+++
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+S++ C + G ++A L ++MI+++I PN VT + + A L E K++ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD----VVAWAVLFGGYAETGMAHK 296
+ + ++L++ + + A +F + KD VV + L G+ + +
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 297 SME-----------------------------------VFCNMLSDGVRPDAVALVKILT 321
ME VF M+SDGV PD + +L
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK---- 377
+ G ++ A+ + ++ +S + + Y +IE K +++ +F ++ K
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
+VV ++++++ + G EEA LF +M L P+ T+ +++ A
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRA 580
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 137/315 (43%), Gaps = 12/315 (3%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
++ ++S ++ C+ + AL + +M+ EP+ VTL S L + + + +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAET 291
V G++ ++ L+ + + AV + +R+ K D+V + ++ G +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G ++ + M + P V I+ A+ + A+ L + G N
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
SLI +A+++ M + +VV +S++I A+ G+ EA KL+ +M
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 408 HSDLKPNKVTFISILSA-CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
S + P+ T+ S+++ C H L +E +F++M++K P+ Y ++ +
Sbjct: 355 RS-IDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKR 411
Query: 467 LDRALDIINNMPMQA 481
+D +++ M +
Sbjct: 412 VDEGMELFREMSQRG 426
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T SI L K+E ++ +L++ ++ D++ + +IE K G++ D ++
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 67 F----MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDP 111
F ++ KP+VV +T++++G+ R G E A A F M +E P P
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM---KEEGPLP 569
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 190/431 (44%), Gaps = 54/431 (12%)
Query: 59 EMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTL 114
+ NDA+++F P P ++ +T +++ + ++ ++ F +M +L P +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG--IPPLLCT 120
Query: 115 VSAASACAQLSDSKLGRSIH-GFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP 173
+ C LS S G + + G + L SLLN Y I+ A LF ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 174 ----DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT---LVSALRACASAS 226
+V+++++++ C N +A++LFN+M PN VT LV+ L
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL------- 233
Query: 227 YLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFG 286
E GR +G + L DM + P +V+ + L
Sbjct: 234 -CEIGR--------WG-----DAAWLLRDMMKRRIEP-------------NVITFTALID 266
Query: 287 GYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDN 346
+ + G ++ E++ M+ V PD ++ + G+L +A + + ++G
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 347 NEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVV----IWSSIIAAYGFHGQGEEALKLF 402
NE I +LI + K +++ K+F M+ K VV ++ +I Y G+ + A ++F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 403 YQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLG 462
QM++ P+ T+ +L G VE+ + IF+ M K ++ + Y I++ +
Sbjct: 387 NQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYM-RKREMDINIVTYTIIIQGMC 444
Query: 463 RMGELDRALDI 473
++G+++ A D+
Sbjct: 445 KLGKVEDAFDL 455
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 160/362 (44%), Gaps = 20/362 (5%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PD+V +TS++ GY E A+A F ++ + P+ VT + + + L
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCK--NRHLNH 206
Query: 132 SIHGF--VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLA 185
++ F + G ++ N+L+ + G A L R+M + +VI++++++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ G A +L+N MI + P+ T S + L+E R++ L G
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA----WAVLFGGYAETGMAHKSMEVF 301
+ T L+ + K E+ + IF + +K VVA + VL GY G + EVF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M S PD +L + G +++A+ + ++ K D N +I+ K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 362 SSIDNANKVF-----RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKV 416
+++A +F +GM +V+ ++++I+ + G EA LF +M L PN+
Sbjct: 447 GKVEDAFDLFCSLFSKGMK-PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL-PNES 504
Query: 417 TF 418
+
Sbjct: 505 VY 506
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 166/383 (43%), Gaps = 28/383 (7%)
Query: 183 MLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYG 242
++ C + A +M+ EP+ VT S L + +E+ + + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 243 FELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGYAETGMAHKSM 298
F+ T L+ K +AV++FN++ + +VV + L G E G +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 299 EVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMY 358
+ +M+ + P+ + ++ A ++G L +A L+ + + + + SLI
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 359 AKCSSIDNANKVF----RGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPN 414
+D A ++F R Y + VI++++I + + E+ +K+FY+M+ + N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS-QKGVVAN 362
Query: 415 KVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
+T+ ++ G + +F+ M ++ + PD Y +++D L G++++AL I
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 475 NNM---PMQAGPHVWGALL-GACHIHHNIKMGEVA-AKNLF------PLDPNHAGYYTLL 523
M M + ++ G C K+G+V A +LF + PN Y T++
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMC------KLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 524 SNIYCVDKNWHNAAKLRSLIKEN 546
S +C H A L +KE+
Sbjct: 476 SG-FCRRGLIHEADSLFKKMKED 497
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 198/466 (42%), Gaps = 51/466 (10%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFF 98
+++ S +I + +C ++ A + K P+ + +++++ G G AL
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 99 SRMAVLEEVSPDPVTLVSAASA-CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYG 157
RM + PD +T+ + + C +++ I V+ G + +LN+
Sbjct: 182 DRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMC 239
Query: 158 KTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWV 213
K+G A L R+M ++ D + +S ++ +G+ NA +LFNEM K I N +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 214 TLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI 273
T + +A ++G K+ + D+ R
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLR-------------------------------DMIKRK 328
Query: 274 PKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
+VV ++VL + + G ++ E+ M+ G+ PD + ++ + L +A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAY 389
+ + G D N LI Y K + ID+ ++FR M+ + D V ++++I +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
G+ A +LF +M + + PN VT+ +L G E+ + IF+ + K ++
Sbjct: 449 CELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFE-KIEKSKMEL 506
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNMPMQA---GPHVWGALLGA 492
D Y I++ + ++D A D+ ++P++ G + ++G
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 185/448 (41%), Gaps = 54/448 (12%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
+T+SI + +KL + G + K + + S LI G +++A+E+
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 70 YP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVT--------LVSA 117
KPD++ ++V G SG A+ +M V P+ VT S
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPVLNVMCKSG 242
Query: 118 ASACA------------QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
+A A +L K I G K LD +L N + + G T +I +
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITY 301
Query: 166 EIL----------------FREMPDK----DVISWSSMLACYADNGAATNALDLFNEMID 205
IL R+M + +V+++S ++ + G A +L EMI
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN 265
+ I P+ +T S + ++L++ ++ L VS G + L++ Y K + ++
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 266 AVDIFNRIPKKDVVA----WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
+++F ++ + VVA + L G+ E G + + E+F M+S V P+ V +L
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK---- 377
+ + G ++A+ + + KS + + I +I S +D+A +F + K
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQM 405
V ++ +I G EA LF +M
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 19/338 (5%)
Query: 50 LIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLE 105
LI + G +D ++ + K P+VV ++ ++ + + G A M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHR 362
Query: 106 EVSPDPVTLVSAASA-CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
++PD +T S C + K + + V + G D ++ N L+N Y K I
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDD 421
Query: 165 AEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
LFR+M + D +++++++ + + G A +LF EM+ +++ PN VT L
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP----KK 276
E+ +I + EL+ + ++ S ++A D+F +P K
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
V + ++ GG + G ++ +F M DG PD ++ A G ++V L
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM 374
+ + GF + AS I+M S K F M
Sbjct: 602 EELKRCGFS----VDASTIKMVIDMLSDGRLKKSFLDM 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 117/286 (40%), Gaps = 10/286 (3%)
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
A +A+DLF +MI R P + A A + + + G +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 253 LMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
+++ + +C A +I K + + ++ L G G +++E+ M+ G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
+PD + + ++ + G +A+ L + + G N ++ + K A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 369 KVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
++ R M + D V +S II HG + A LF +M + N +T+ ++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGG 307
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
+AG ++G + M+ K ++ P+ + +++D + G+L A
Sbjct: 308 FCNAGRWDDGAKLLRDMI-KRKINPNVVTFSVLIDSFVKEGKLREA 352
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 16/308 (5%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
+PDVV +T+++ G G ALA RM +EE T+++ ++ D++
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRM--VEEGHQPYGTIINGL---CKMGDTESAL 61
Query: 132 SIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACY 187
++ ++ + H+ + N++++ K G A+ LF EM DK DVI++S M+ +
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 188 ADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELET 247
+G T+A L +MI+++I P+ VT + + A + E +I+ + G T
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCN 303
+++D + K +A + + + K DVV ++ L GY + ME+FC
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M G+ + V ++ ++G L A L + SG N YI + M A S
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN-YI--TFQSMLASLCS 298
Query: 364 IDNANKVF 371
K F
Sbjct: 299 KKELRKAF 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/318 (17%), Positives = 144/318 (45%), Gaps = 14/318 (4%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
DV+++++++ G AL L + M+++ +P + + + S L K+
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAET 291
+ + + + A++D K +A ++F + K DV+ ++ + + +
Sbjct: 69 ETHI----KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G + ++ +M+ + PD V ++ A+ + G + +A ++ + + G
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
S+I+ + K +++A ++ MA K DVV +S++I Y + + +++F +M +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-H 243
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
+ N VT+ +++ G ++ + ++M++ + P+ + M+ L EL
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS-GVAPNYITFQSMLASLCSKKEL 302
Query: 468 DRALDIINNMPMQAGPHV 485
+A I+ ++ G H+
Sbjct: 303 RKAFAILEDLQKSEGHHL 320
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 209/485 (43%), Gaps = 48/485 (9%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T +I L + ++ +K + D + +I SK G+ + A+++
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 67 FMEYP------KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
F +PDVV +TSI+ Y G E A F M V E + P+ V+ + A
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGA 364
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF----REMPDKD 176
A S S+ G +K+ G+ + LLN YG++ A+ +F +E +
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 424
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
V+++++++ Y NG A+++F +M I+PN V++ + L AC+ + +
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
A S G L T + + Y+ + E A+ ++ + KK V A +V F T +
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF-----TILISG 539
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
S C M P+A++ +K + +S +TK + +S++
Sbjct: 540 S----CRM---SKYPEAISYLKEMEDLS------------IPLTKEVY-------SSVLC 573
Query: 357 MYAKCSSIDNANKVFRGMAY----KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
Y+K + A +F M DV+ ++S++ AY + +A +LF +M + ++
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG-IE 632
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
P+ + +++ A + G + D+M K + + I + E RA+D
Sbjct: 633 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF-SACNTLQEWKRAID 691
Query: 473 IINNM 477
+I M
Sbjct: 692 LIQMM 696
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 137/295 (46%), Gaps = 19/295 (6%)
Query: 150 NSLLNLYGKTGSIKSAEILFREM------PDKDVISWSSMLACYADNGAATNALDLFNEM 203
++L+N +G+ G + A L +M P + ++++++ +G AL++ +M
Sbjct: 182 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKM 239
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
D + P+ VT L A S + +L +TT ++ K
Sbjct: 240 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 264 ENAVDIFNRIPKK------DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV 317
A+D+FN + +K DVV + + Y+ G VF M+++G++P+ V+
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
++ A + G+ A+ + + ++G + L+ Y + A +VF M +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 378 ----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+VV ++++I AYG +G EA+++F QM +KPN V+ ++L+ACS +
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRS 473
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 140/613 (22%), Positives = 264/613 (43%), Gaps = 75/613 (12%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD T +I L + ++ +K + D + +I SK G+ + A+++
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 67 FMEYP------KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA 120
F +PDVV +TSI+ Y G E A F M V E + P+ V+ + A
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGA 232
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF----REMPDKD 176
A S S+ G +K+ G+ + LLN YG++ A+ +F +E +
Sbjct: 233 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 292
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
V+++++++ Y NG A+++F +M I+PN V++ + L AC+ + +
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHK 296
A S G L T + + Y+ + E A+ ++ + KK V A +V F T +
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF-----TILISG 407
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
S C M P+A++ +K + +S +TK + +S++
Sbjct: 408 S----CRM---SKYPEAISYLKEMEDLS------------IPLTKEVY-------SSVLC 441
Query: 357 MYAKCSSIDNANKVFRGMAY----KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
Y+K + A +F M DV+ ++S++ AY + +A +LF +M + ++
Sbjct: 442 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG-IE 500
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
P+ + +++ A + G + D+M K + + I + E RA+D
Sbjct: 501 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF-SACNTLQEWKRAID 559
Query: 473 IINNMPMQAGPHVWGALLGACH--IHHNIKMGEVAA--KNLFPLDPNHAG-----YYTLL 523
+I M P++ +G + +H K G+V A K + + + G Y LL
Sbjct: 560 LIQMM----DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Query: 524 SNIYCVDKNWHNAAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQI-FE- 581
++ V NW K + + + + ++ N+++ + S F + S I FE
Sbjct: 616 EHLLAVG-NWR---------KYIEVLEWMSGAGIQPSNQMYRDIIS--FGERSAGIEFEP 663
Query: 582 VLRKLDVKMREEC 594
++R+ +MREEC
Sbjct: 664 LIRQKLGEMREEC 676
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 137/295 (46%), Gaps = 19/295 (6%)
Query: 150 NSLLNLYGKTGSIKSAEILFREM------PDKDVISWSSMLACYADNGAATNALDLFNEM 203
++L+N +G+ G + A L +M P + ++++++ +G AL++ +M
Sbjct: 50 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKM 107
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
D + P+ VT L A S + +L +TT ++ K
Sbjct: 108 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 264 ENAVDIFNRIPKK------DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV 317
A+D+FN + +K DVV + + Y+ G VF M+++G++P+ V+
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK 377
++ A + G+ A+ + + ++G + L+ Y + A +VF M +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 378 ----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHA 428
+VV ++++I AYG +G EA+++F QM +KPN V+ ++L+ACS +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRS 341
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 30/449 (6%)
Query: 43 DMFVGSALIELYSKCGEMNDA---VEVFMEYP-KPDVVLWTSIVTGYERSGTPELALAFF 98
D+ S LI G +++A ++ +EY +PD V + ++ +SG LAL F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF--VKRCGLDTHLSLANSLLNLY 156
+M EE + + + + D ++ F ++ G+ + +SL+
Sbjct: 234 RKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 157 GKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNW 212
G + REM + DV+++S+++ + G A +L+NEMI + I P+
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 213 VTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNR 272
+T S + + L E ++ L VS G E + + L++ Y K ++ + +F
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 273 IPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGV 328
I K + + + L G+ ++G + + E+F M+S GV P V +L + + G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 329 LQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSS 384
L +A+ + + KS I +I S +D+A +F ++ K DVV ++
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 385 IIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF-ISILSACSHAGLVEEGITIFDIMVN 443
+I G EA LF +M P+ T+ I I + +GL+ I ++ V
Sbjct: 531 MIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 444 KYQLMPDSEHYGIMVDLLGRMGELDRALD 472
+ DS +++D+L DR LD
Sbjct: 590 GFS--ADSSTIKMVIDMLS-----DRRLD 611
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 185/440 (42%), Gaps = 59/440 (13%)
Query: 109 PDPVTLVSAASACAQLSDSKLGRSIHGFVKRC---GLDTHLSLANSLLNLYGKTGSIKSA 165
P P+ SA A+ L + GF K G++ + ++N Y + + A
Sbjct: 68 PTPIDFNRLCSAVARTKQYDL---VLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 166 -EILFREMP---DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
+L R + D I++S+++ + G + A+ L + M++ + P+ VT+ + +
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP------- 274
+ E + V YGF+ + +++ K + A+D+F ++
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 275 --------------------------------KKDVVAWAVLFGGYAETGMAHKSMEVFC 302
K DVV ++ L GG G ++
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
M+ + PD V ++ + G L +A L+ + G + SLI+ + K +
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 363 SIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
+ AN++F M K D+V +S +I +Y + ++ ++LF ++++ L PN +T+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG-LIPNTITY 423
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP 478
+++ +G + +F MV++ + P YGI++D L GEL++AL+I M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 479 ---MQAGPHVWGALL-GACH 494
M G ++ ++ G C+
Sbjct: 483 KSRMTLGIGIYNIIIHGMCN 502
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 161/356 (45%), Gaps = 14/356 (3%)
Query: 137 VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGA 192
+K G++ L N L+N + SAE +F M D++++++M+ Y G
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
A++ +M + E + +T ++ ++AC + S ++Q G ++ +
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 253 LMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
++ K +F + +K +V + VL GYA++G ++ + M+ +G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
+PD V ++ + + G +++A+ G N +SLI+ K +D A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 369 KVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
++F M+ K D ++++I A+ H + +EA+ LF +M T+ +LS
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM-PM 479
EE + ++D+M++K + P + + + L G++ RA I++ + PM
Sbjct: 513 MFKEHRNEEALKLWDMMIDK-GITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 129/325 (39%), Gaps = 65/325 (20%)
Query: 72 KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
KPD+V + +++ GY ++G + A+ M D +T ++ AC +DS G
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH-EADKITYMTMIQAC--YADSDFGS 310
Query: 132 SI---------------HGF----------------------VKRCGLDTHLSLANSLLN 154
+ H F + R G ++++ L++
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 155 LYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
Y K+GS++ A L M D+ DV+++S ++ NG ALD F+ +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
N + S + A ++E ++ + G ++ AL+D + K + A+ +F
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 271 NRIPKKD-----VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVAL--------- 316
R+ +++ V + +L G + ++++++ M+ G+ P A
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 317 -------VKILTAISELGVLQQAVC 334
KIL ++ +GV+ A C
Sbjct: 551 SGKVARACKILDELAPMGVILDAAC 575
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 133/329 (40%), Gaps = 52/329 (15%)
Query: 56 KCGEMNDAVEVF----MEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDP 111
K G++N+ VF + KP+V ++T ++ GY +SG+ E A+ RM + E PD
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDV 397
Query: 112 VTLVSAASACAQLSDSKLGRSIHGF--VKRCGLDTHLSLANSLLNLYGKTGSIKSAEILF 169
VT + + + ++ ++ F + GL + +SL++ GK G + AE LF
Sbjct: 398 VTYSVVVNGLCK--NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 170 REMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASA 225
EM +K D +++++ + + A+ LF M
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM---------------------- 493
Query: 226 SYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLF 285
EE Q +Y T L+ K E A+ +++ + K + A F
Sbjct: 494 ---EEEEGCDQTVYTY---------TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Query: 286 ----GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
G +G ++ ++ + GV DA A ++ + + G +++A L +T+
Sbjct: 542 RALSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITE 600
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKV 370
G + I +I K D A K+
Sbjct: 601 RGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 195/472 (41%), Gaps = 57/472 (12%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFME 69
+T+SI + C +KL + G + K + D S LI G +++A+E+
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 70 YP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVL----EEVSPDPVTLV---SAA 118
KP ++ ++V G +G A+ RM EV+ PV V S
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 119 SACA------------QLSDSKLGRSIHGFVKRCGLDTHLSLAN---------------S 151
+A A +L K I G K LD +L N +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 152 LLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKR 207
L+ + G L R+M + DV+++S+++ C+ G A +L EMI +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
I P+ VT S + + L++ + L VS G L++ Y K + ++ +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 268 DIFNRIPKKDVVA----WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
++F ++ + VVA + L G+ E G + E+F M+S VRPD V+ +L +
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DV 379
+ G ++A+ + + KS + + I +I S +D+A +F + K DV
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 380 VIWSSIIAAYGFHGQGEEALKLFYQMA--NHSDLKPNKVTFISILSACSHAG 429
++ +I G EA LF +M HS PN T+ ++ A H G
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS---PNGCTYNILIRA--HLG 574
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 148/348 (42%), Gaps = 25/348 (7%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFF 98
D+ + + LI + G +D ++ + K PDVV +++++ + + G A
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF----VKRCGLDTHLSLANSLLN 154
M + +SPD VT S + +++L ++ H K CG ++ N L+N
Sbjct: 341 KEM-IQRGISPDTVTYTSLIDGFCK--ENQLDKANHMLDLMVSKGCG--PNIRTFNILIN 395
Query: 155 LYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
Y K I LFR+M + D +++++++ + + G A +LF EM+ +R+ P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
+ V+ L E+ +I + EL+ + ++ S ++A D+F
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 271 NRIP----KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISEL 326
+P K DV + ++ GG + G ++ +F M DG P+ ++ A
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 327 GVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM 374
G ++ L + + GF + AS ++M S K F M
Sbjct: 576 GDATKSAKLIEEIKRCGFS----VDASTVKMVVDMLSDGRLKKSFLDM 619
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 172/431 (39%), Gaps = 77/431 (17%)
Query: 61 NDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVS 116
+DAV++F E P+P ++ ++ + + R+ +L L +M L+ ++ + TL
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSI 112
Query: 117 AASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKD 176
+ C RC LSLA S + K G + D
Sbjct: 113 MINCCC----------------RC---RKLSLAFSAMGKIIKLGY------------EPD 141
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
+++S+++ G + AL+L + M++ +P +TL
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN-------------------- 181
Query: 237 LAVSYGFELETTVSTA--LMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMA 294
A+ G L VS A L+D ++ N V + + ++G
Sbjct: 182 -ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV------------TYGPVLKVMCKSGQT 228
Query: 295 HKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASL 354
+ME+ M ++ DAV I+ + + G L A L + GF + I +L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 355 IEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSD 410
I + D+ K+ R M + DVV +S++I + G+ EA +L +M
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG- 347
Query: 411 LKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRA 470
+ P+ VT+ S++ +++ + D+MV+K P+ + I+++ + +D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDG 406
Query: 471 LDIINNMPMQA 481
L++ M ++
Sbjct: 407 LELFRKMSLRG 417
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 191/457 (41%), Gaps = 20/457 (4%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGYERSGTPELALAFF 98
D+ + LI YS G M +A E+ P P V + +++ G + G E A F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 99 SRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGK 158
+ M + +SPD T S + D + ++ + L +S+++L+ +
Sbjct: 329 AEM-LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 159 TGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVT 214
+G++ A + F + + D + ++ ++ Y G + A++L NEM+ + + VT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 215 LVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP 274
+ L L E K+ ++ T L+D + K + +NA+++F ++
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 275 KK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
+K DVV + L G+ + G + E++ +M+S + P ++ ++ A+ G L
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSII 386
+A + + I S+I+ Y + + + M + D + ++++I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 387 AAYGFHGQGEEALKLFYQM-ANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKY 445
+ +A L +M L P+ T+ SIL ++E + M+ +
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER- 686
Query: 446 QLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
+ PD Y M++ L A I + M +Q G
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM-LQRG 722
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 190/465 (40%), Gaps = 54/465 (11%)
Query: 110 DPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLD----THLSLA-NSLLNLYGKTGSIKS 164
+P+ +V C +D LG+ FV + G H SL+ ++++++ ++G +
Sbjct: 77 NPLAVVEVLYRCR--NDLTLGQR---FVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSD 131
Query: 165 AEILFREMPDKDVISW----SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
A+ M + +S +S+ + +++ G+ + DL +R
Sbjct: 132 AQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL------------------IR 173
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK---- 276
A L E + L S GF + AL+ ++ E A ++ I +
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
+V ++ + G K + GV PD V +++A S G++++A L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 337 AFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF----RGMAYKDVVIWSSIIAAYGFH 392
+ GF Y ++I K + A +VF R D + S++
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 393 GQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSE 452
G E K+F M + D+ P+ V F S++S + +G +++ + F+ V + L+PD+
Sbjct: 354 GDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPDNV 411
Query: 453 HYGIMVDLLGRMGELDRALDIINNMPMQAGPH---VWGALL-GACHI----HHNIKMGEV 504
Y I++ R G + A+++ N M Q + +L G C + E+
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 505 AAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLK 549
+ LFP + T+L + +C N NA +L +KE R++
Sbjct: 472 TERALFP----DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 160/391 (40%), Gaps = 50/391 (12%)
Query: 7 PDSHTV-SIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
PDS T S+ +++C +E ++ ++ ++ D+ S+++ L+++ G ++ A+
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSD-MRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 66 VFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRM-------------------- 101
F + PD V++T ++ GY R G +A+ + M
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 102 ---------AVLEEVS-----PDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLS 147
+ E++ PD TL +L + + + +K + +
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 148 LANSLLNLYGKTGSIKSAEILFREMPDKDV----ISWSSMLACYADNGAATNALDLFNEM 203
N+LL+ +GK G I +A+ ++ +M K++ IS+S ++ G A +++EM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 204 IDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSP 263
I K I+P + S ++ + +G + +S GF + L+ +++ +
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 264 ENAVDIFNRIPKK------DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALV 317
A + ++ ++ DV + + G+ ++ V M+ GV PD
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 318 KILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
++ L +A +H + + GF ++
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 181/398 (45%), Gaps = 34/398 (8%)
Query: 173 PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR 232
P +V+++ +++ + G A DLF M + IEP+ + + + A L G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 233 KIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGY 288
K+ A+ G +L+ V ++ +D+Y+K A ++ R+ +VV + +L G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+ G +++ ++ +L G+ P V ++ + G L+ L+ + K G+ +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 349 YIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQ 404
I L++ +K + +A + M + +VV+++S+I + + +EALK+F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 405 MANHSDLKPNKVTFISILSA-------CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
M + +KP+ TF +++ C H G+ +FD+M + ++ D ++
Sbjct: 522 MGIYG-IKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLM-QRNKISADIAVCNVV 578
Query: 458 VDLLGRMGELDRALDIINNM---PMQAGPHVWGALL-GACHIHHNIKMGEVAAKNLF--- 510
+ LL + ++ A NN+ M+ + ++ G C + ++ E A+ +F
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR---RLDE--AERIFELL 633
Query: 511 ---PLDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKE 545
P PN T+L ++ C + + A ++ S++ E
Sbjct: 634 KVTPFGPNTVT-LTILIHVLCKNNDMDGAIRMFSIMAE 670
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/455 (18%), Positives = 197/455 (43%), Gaps = 68/455 (14%)
Query: 49 ALIELYSKCGEMNDAVEVF--MEYP--KPDVVLWTSIVTGYERSGTPELALAFFSRMAVL 104
LI + K GEM+ A ++F ME +PD++ +++++ GY ++G + FS
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS----- 345
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
+++H G+ + + +S +++Y K+G + +
Sbjct: 346 --------------------------QALHK-----GVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 165 AEILFREM----PDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
A ++++ M +V++++ ++ +G A ++ +++ + +EP+ VT S +
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMD----MYLKCSSPENAVDIFNRIPKK 276
L G +++ + G+ + + L+D L + +V + + +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 277 DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLH 336
+VV + L G+ ++++VF M G++PD V T + + +++ A C H
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD----VATFTTVMRVSIMEDAFCKH 550
Query: 337 A----------FVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVF----RGMAYKDVVIW 382
+ ++ + + +I + KC I++A+K F G D+V +
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 383 SSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMV 442
+++I Y + +EA ++F ++ + PN VT ++ ++ I +F IM
Sbjct: 611 NTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 443 NKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
K P++ YG ++D + +++ + + M
Sbjct: 670 EKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 188/459 (40%), Gaps = 60/459 (13%)
Query: 35 LKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGT 90
+++ ++ D+ S LI+ Y K G + ++F + K DVV+++S + Y +SG
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 91 PELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLAN 150
A + RM + + +SP+ VT Q ++G + + G++ + +
Sbjct: 372 LATASVVYKRM-LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 151 SLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDK 206
SL++ + K G+++S L+ +M DV+ + ++ + G +A+ +M+ +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 207 RIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE---------------------- 244
I N V S + + +E K+ +L YG +
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 245 LETTVSTALMDM-------------------YLKCSSPENAVDIFNRIPK----KDVVAW 281
++ T+ L D+ KC E+A FN + + D+V +
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
+ GY ++ +F + P+ V L ++ + + + A+ + + + +
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEE 397
G N L++ ++K I+ + K+F M K +V +S II G+ +E
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Query: 398 ALKLFYQMANHSDLKPNKVTF-ISILSACSHAGLVEEGI 435
A +F+Q A + L P+ V + I I C LVE +
Sbjct: 731 ATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 148/365 (40%), Gaps = 22/365 (6%)
Query: 199 LFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYL 258
L + ++D PN VT + + ++ + ++ G E + + L+D Y
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 259 KCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAV 314
K +F++ K DVV ++ Y ++G + V+ ML G+ P+ V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 315 ALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM 374
++ + + G + +A ++ + K G + + +SLI+ + KC ++ + ++ M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 375 AY----KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGL 430
DVVI+ ++ G A++ +M S ++ N V F S++
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVVFNSLIDGWCRLNR 511
Query: 431 VEEGITIFDIMVNKYQLMPDSEHY------GIMVDLLGRMGELDRAL---DIINNMPMQA 481
+E + +F +M Y + PD + IM D + + L D++ + A
Sbjct: 512 FDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 482 GPHVWGALLGACHIHHNIKMGEVAAKNLF--PLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
V ++ H I+ NL ++P+ Y T++ YC + A ++
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG-YCSLRRLDEAERI 629
Query: 540 RSLIK 544
L+K
Sbjct: 630 FELLK 634
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/395 (17%), Positives = 146/395 (36%), Gaps = 91/395 (23%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
P+ T +I +K ++ ++G + K ++ + S+LI+ + KCG + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 67 F-----MEYPKPDVVLWTSIVTGYERSGTPELALAF----------------------FS 99
+ M YP PDVV++ +V G + G A+ F +
Sbjct: 449 YEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 100 RMAVLEE------------VSPDPVTLVSAASA-------CAQLSDSKLGRSIHGFVKRC 140
R+ +E + PD T + C + + +G + ++R
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRN 566
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNA 196
+ +++ N +++L K I+ A F + + D++++++M+ Y A
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 197 LDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDM 256
+F + PN VTL + + ++ ++ + G + LMD
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686
Query: 257 YLKCSSPENAVDIFNRIPKK---------------------------------------D 277
+ K E + +F + +K D
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 278 VVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPD 312
VVA+A+L GY + G ++ ++ +ML +GV+PD
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 176/410 (42%), Gaps = 54/410 (13%)
Query: 48 SALIELYSKCGEMNDAVE-----VFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMA 102
S+L+ Y ++DAV V M Y +PD + +T+++ G A+A RM
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRM- 216
Query: 103 VLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
V P+ VT + + D L ++ ++ ++ ++ + +++++ K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 163 KSAEILFREMPDK----DVISWSSMLAC-------------------------------- 186
A LF EM +K +VI++SS+++C
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 187 ---YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGF 243
+ G A L++EMI + I+P+ T S + L+E + + +L +S
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 244 ELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSME 299
L++ + K + V++F + ++ + V + L G+ + +
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 300 VFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYA 359
VF M+SDGV P+ + +L + + G L++A+ + ++ +S + Y +IE
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 360 KCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQM 405
K +++ +F ++ K DV+I++++I+ + G EEA LF +M
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 138/315 (43%), Gaps = 12/315 (3%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
++ +++ ++ C+ + AL L +M+ EP+ VTL S L + + +
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAET 291
V G+ +T T L+ + AV + +R+ ++ ++V + V+ G +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
G + + M + + + V ++ ++ + A+ L + G N
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+SLI +A+++ M + +VV ++++I A+ G+ EA KL+ +M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 408 HSDLKPNKVTFISILSA-CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGE 466
S + P+ T+ S+++ C H L +E +F++M++K P+ Y +++ +
Sbjct: 359 RS-IDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKR 415
Query: 467 LDRALDIINNMPMQA 481
+D +++ M +
Sbjct: 416 IDEGVELFREMSQRG 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 15/252 (5%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASA-CAQLSDSKLGR 131
P+VV + +++ + + G A + M + + PD T S + C +L
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMH---DRLDE 383
Query: 132 SIHGFVKRCGLDTHLSLA--NSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLA 185
+ H F D ++ N+L+N + K I LFREM + + +++++++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 186 CYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFEL 245
+ NA +F +M+ + PN +T + L LE+ + + E
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 246 ETTVSTALMDMYLKCSSPENAVDIFNRIP----KKDVVAWAVLFGGYAETGMAHKSMEVF 301
+++ K E+ D+F + K DV+ + + G+ G+ ++ +F
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 302 CNMLSDGVRPDA 313
M DG PD+
Sbjct: 564 RKMREDGPLPDS 575
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/593 (19%), Positives = 230/593 (38%), Gaps = 66/593 (11%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
RPD + + ++S L+ L + + ++ D ++ + LI+ K ++ +AV
Sbjct: 224 RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG 283
Query: 66 VFMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+ + KPDVV + ++V G + E+ L M L SP + S
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGL 342
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPD----KDV 177
+ + ++ V G+ +L + N+L++ K AE+LF M +
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 178 ISWSSMLACYADNGAATNALDLFNEMID-------------------------------- 205
+++S ++ + G AL EM+D
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 206 ---KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSS 262
K++EP VT S + S + + +++ G T L+ +
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 263 PENAVDIFNRIP----KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVK 318
+AV +FN + K + V + V+ GY E G K+ E M G+ PD +
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 319 ILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK- 377
++ + G +A + K + NE L+ + + ++ A V + M +
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 378 ---DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEG 434
D+V + +I H + L +M + LKP+ V + S++ A S G +E
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG-LKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 435 ITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM-PMQAGPH--VWGALL- 490
I+D+M+N+ +P+ Y +++ L + G ++ A + + M P+ + P+ +G L
Sbjct: 702 FGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 491 ----GACHIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
G + +++ K L + Y +L +C A++L
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLA----NTATYNMLIRGFCRQGRIEEASEL 809
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 179/441 (40%), Gaps = 47/441 (10%)
Query: 50 LIELYSKCGEMNDAVEVF-MEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVL 104
LI+ Y + + D V VF M K P+V ++++ G + LA+ F+ M +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 105 EEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKS 164
+ PD + +L D + + ++ G D ++ N L++ K +
Sbjct: 222 G-IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 165 AEILFREMPDKD----VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALR 220
A + +++ KD V+++ +++ L++ +EM+ R P+ + S +
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 221 ACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVA 280
+EE + + V +G V AL+D K A +F+R+ K
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI---- 396
Query: 281 WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVT 340
G+RP+ V ++ G L A+ +
Sbjct: 397 ---------------------------GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 341 KSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD----VVIWSSIIAAYGFHGQGE 396
+G + Y SLI + K I A M K VV ++S++ Y G+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 397 EALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGI 456
+AL+L+++M + P+ TF ++LS AGL+ + + +F+ M ++ + P+ Y +
Sbjct: 490 KALRLYHEMTGKG-IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNV 547
Query: 457 MVDLLGRMGELDRALDIINNM 477
M++ G++ +A + + M
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEM 568
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 185/446 (41%), Gaps = 19/446 (4%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
S LI+++ + G+++ A+ E K V + S++ G+ + G A F + M +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-I 464
Query: 104 LEEVSPDPVTLVSAASA-CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSI 162
+++ P VT S C++ +K R H + G+ + +LL+ + G I
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLI 523
Query: 163 KSAEILFREMPDKDV----ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSA 218
+ A LF EM + +V ++++ M+ Y + G + A + EM +K I P+ +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDV 278
+ E + EL T L+ + + E A+ + + ++ V
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 279 VAWAVLFGGYAETGMAHKSMEVFCNMLSD----GVRPDAVALVKILTAISELGVLQQAVC 334
V +G + + HK ++F +L + G++PD V ++ A S+ G ++A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 335 LHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDVVIWSSIIAAY-GFHG 393
+ + G NE ++I K ++ A + M V +
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 394 QGEEALKLFYQMANH--SDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
+GE ++ ++ N L N T+ ++ G +EE + M+ + PD
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GVSPDC 822
Query: 452 EHYGIMVDLLGRMGELDRALDIINNM 477
Y M++ L R ++ +A+++ N+M
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSM 848
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 64/367 (17%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGYERSGTPELALAFFS 99
++ + L+ + G + DAV++F E KP+ V + ++ GY G A F
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 100 RMAVLEEVSPDPVT---LVSAASACAQLSDSKL-------GRS----------IHGFVKR 139
M + + PD + L+ Q S++K+ G +HGF +
Sbjct: 567 EMTE-KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 140 CGLDTHLSLANSL--------LNLYGK--TGSIKSAEI-----LFREMPDK----DVISW 180
L+ LS+ + L YG GS+K + L +EM D+ D + +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGR----KIHQ 236
+SM+ + G A +++ MI++ PN VT + + A ++ E K+
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 237 LA-----VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPK---KDVVAWAVLFGGY 288
++ V+YG L+ ++ +DM + AV++ N I K + + +L G+
Sbjct: 746 VSSVPNQVTYGCFLDI-LTKGEVDM-------QKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 289 AETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
G ++ E+ M+ DGV PD + ++ + +++A+ L +T+ G +
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 349 YIGASLI 355
+LI
Sbjct: 858 VAYNTLI 864
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 200/455 (43%), Gaps = 56/455 (12%)
Query: 44 MFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFS 99
++ S +I + +C +++ A + K PD V++ +++ G AL
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 100 RMAVLEEVSPDPV-----TLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLN 154
RM E+ P TLV+ ++SD+ + I V+ G + +LN
Sbjct: 183 RMV---EMGHKPTLITLNTLVNGLCLNGKVSDAVV--LIDRMVET-GFQPNEVTYGPVLN 236
Query: 155 LYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKRIEP 210
+ K+G A L R+M ++ D + +S ++ +G+ NA +LFNEM K +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 211 NWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIF 270
+ +T + + +A ++G K+ L DM + SP
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKL------------------LRDMIKRKISP------- 331
Query: 271 NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQ 330
+VV ++VL + + G ++ ++ M+ G+ P+ + ++ + L+
Sbjct: 332 ------NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 331 QAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKDV----VIWSSII 386
+A+ + + G D + LI Y K + ID+ ++FR M+ + V V +++++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 387 AAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQ 446
+ G+ E A KLF +M + ++P+ V++ +L G +E+ + IF + K +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKALEIFG-KIEKSK 503
Query: 447 LMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA 481
+ D Y I++ + ++D A D+ ++P++
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 203/483 (42%), Gaps = 62/483 (12%)
Query: 10 HTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIE---LYSKCGEMNDAVEV 66
+T+SI + +KL G + K + D + + L+ L + E + V+
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 67 FMEYP-KPDVVLWTSIVTGYERSGTPELALAFFSRMAVL----EEVSPDPVTLV---SAA 118
+E KP ++ ++V G +G A+ RM EV+ PV V S
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 119 SACA------------QLSDSKLGRSIHGFVKRCGLDTHLSL---------------ANS 151
+A A +L K I G K LD +L N+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 152 LLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMIDKR 207
L+ + G L R+M + +V+++S ++ + G A L EM+ +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 208 IEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAV 267
I PN +T S + + LEE ++ L +S G + + L++ Y K + ++ +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 268 DIFNRIPKKDVVA----WAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAI 323
++F + + V+A + L G+ ++G + ++F M+S VRPD V+ +L +
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 324 SELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC--SSIDNANKVFRGMAYKDVVI 381
+ G L++A+ + + KS + + IG +I ++ C S +D+A +F + K V +
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELD--IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 382 ----WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL-------SACSHAGL 430
++ +I+ +A LF +M P+++T+ ++ A + A L
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGH-APDELTYNILIRAHLGDDDATTAAEL 600
Query: 431 VEE 433
+EE
Sbjct: 601 IEE 603
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 162/397 (40%), Gaps = 26/397 (6%)
Query: 193 ATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTA 252
A +A+DLF +MI R P + A A E + + S G +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 253 LMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDG 308
+++ + +C A +I K D V + L G +++E+ M+ G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 309 VRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNAN 368
+P + L ++ + G + AV L + ++GF NE ++ + K A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 369 KVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSA 424
++ R M + D V +S II G + A LF +M K + +T+ +++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGG 307
Query: 425 CSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQAG-- 482
+AG ++G + M+ K ++ P+ + +++D + G+L A ++ M MQ G
Sbjct: 308 FCNAGRWDDGAKLLRDMI-KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIA 365
Query: 483 PH--VWGALL-GAC---HIHHNIKMGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNA 536
P+ + +L+ G C + I+M ++ DP+ + +L N YC +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISK--GCDPDIM-TFNILINGYCKANRIDDG 422
Query: 537 AKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFH 573
+ L +E L+ V+ + V V F S +
Sbjct: 423 LE---LFREMSLRGVIANT-VTYNTLVQGFCQSGKLE 455
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 182/433 (42%), Gaps = 51/433 (11%)
Query: 16 LKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK--- 72
L + V L+K +V + ++ + D++ + +I + C +++ A+ + + K
Sbjct: 92 LSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY 151
Query: 73 -PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGR 131
PD V S+V G+ R A++ +M E+ P +V+ + L +K
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV---EIGYKP-DIVAYNAIIDSLCKTKRVN 207
Query: 132 SIHGFVK-------RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVISWSSML 184
F K R + T+ +L N L N + + + + ++ +VI++S++L
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
+ NG A +LF EM+ I+P+ VT S + ++E ++ L VS G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEV 300
+ L++ + K E+ + +F + ++ + V + L G+ + G K+ E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
F M G+ PD +L + + G L++A+ + + K D
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD--------------- 432
Query: 361 CSSIDNANKVFRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFIS 420
D+V ++++I G+ EEA LF ++ LKP+ VT+ +
Sbjct: 433 ----------------LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYTT 475
Query: 421 ILSACSHAGLVEE 433
++S GL+ E
Sbjct: 476 MMSGLCTKGLLHE 488
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 20/390 (5%)
Query: 176 DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIH 235
D+ +++ ++ C+ + AL + +M+ EP+ VT+ S + + + + +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 236 QLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAET 291
V G++ + A++D K +A D F I +K +VV + L G +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 292 GMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIG 351
+ + +M+ + P+ + +L A + G + +A L + + D +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 352 ASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMAN 407
+SLI ID AN++F M K DVV ++++I + + E+ +KLF +M+
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 408 HSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGEL 467
L N VT+ +++ AG V++ F M + + + PD Y I++ L GEL
Sbjct: 359 RG-LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGEL 416
Query: 468 DRALDIINNMPMQAGPHVWGALLGACHIHHNIKMGEV-AAKNLF------PLDPNHAGYY 520
++AL I + MQ + I K G+V A +LF L P+ Y
Sbjct: 417 EKALVIFED--MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 521 TLLSNIYCVDKNWHNAAKLRSLIKENRLKK 550
T++S + C H L + +K+ L K
Sbjct: 475 TMMSGL-CTKGLLHEVEALYTKMKQEGLMK 503
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 152/352 (43%), Gaps = 28/352 (7%)
Query: 24 KLEVGRMIHGFLKKENLDG---------------DMFVGSALIELYSKCGEMNDAVEVFM 68
++ +G +++GF ++ + D+ +A+I+ K +NDA + F
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 69 EYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
E + P+VV +T++V G S A S M + ++++P+ +T + A +
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKN 273
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISW 180
+ + + R +D + +SL+N I A +F M K DV+S+
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
++++ + + + LF EM + + N VT + ++ A +++ ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHK 296
+G + L+ E A+ IF + K+ D+V + + G +TG +
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNE 348
+ +FC++ G++PD V +++ + G+L + L+ + + G N+
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 129/302 (42%), Gaps = 24/302 (7%)
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASAS----YLEEGRKIHQLAVS---YGFELET 247
+A+DLF++M+ R P+ V L A + G+K+ L + Y F +
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI-- 125
Query: 248 TVSTALMDMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCN 303
+++ + C A+ I ++ K D V L G+ ++ +
Sbjct: 126 -----VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 304 MLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSS 363
M+ G +PD VA I+ ++ + + A + + G N +L+ S
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 364 IDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFI 419
+A ++ M K +V+ +S+++ A+ +G+ EA +LF +M S + P+ VT+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYS 299
Query: 420 SILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPM 479
S+++ ++E +FD+MV+K + D Y +++ + ++ + + M
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 480 QA 481
+
Sbjct: 359 RG 360
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 166/394 (42%), Gaps = 27/394 (6%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFF 98
D++ + LI+ + +C ++ A+ + K P +V + S+V G+ F+
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR------FY 166
Query: 99 SRMAVLEEV-----SPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLL 153
M++++++ P+ V + + + + +K+ G+ + NSL+
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 154 NLYGKTGSIK-SAEIL---FREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIE 209
+G+ SA IL R DVI++S+++ Y G A +NEMI + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 210 PNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDI 269
PN VT S + L+E +K+ + VS GF L++ Y K ++ + I
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 270 FNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISE 325
+ + D + L+ GY + G + +V M+S GV PD +L + +
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 326 LGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVI 381
G + +A+ + KS +I+ K +++A +F +A K DV+
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 382 WSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNK 415
+ +++ EA +L+ +M L P K
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKMQKEDGLMPIK 500
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 10/288 (3%)
Query: 195 NALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALM 254
+AL LF +M + P+ V L A A + E + + G + T L+
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 255 DMYLKCSSPENAVDIFNRIPK----KDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVR 310
D + +C+ A+ ++ K +V + L G+ +++M + ++ G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 311 PDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKV 370
P+ V I+ ++ E G + A+ + + K G + SLI + + ++
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 371 FRGMAY----KDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACS 426
M DV+ +S++I YG GQ EA K + +M S + PN VT+ S+++
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGLC 300
Query: 427 HAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDII 474
GL++E + +++V+K P++ Y +++ + +D + I+
Sbjct: 301 IHGLLDEAKKVLNVLVSK-GFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 115/282 (40%), Gaps = 40/282 (14%)
Query: 168 LFREMP----DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACA 223
LFR + D+ S+++++ C+ + AL +M+ EP+ VT S +
Sbjct: 101 LFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 224 SASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAV 283
+ E + V G+E +VV +
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYE-------------------------------PNVVIYNT 189
Query: 284 LFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSG 343
+ E G + +++V +M G+RPD V ++T + G + + + + + G
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 344 FDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEAL 399
+ ++LI++Y K + A K + M + ++V ++S+I HG +EA
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 400 KLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIM 441
K+ + + PN VT+ ++++ A V++G+ I +M
Sbjct: 310 KVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 53/290 (18%)
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
++ +FC+M P V ++L AI++L + + L + G ++ Y +LI+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 357 MYAKCSSIDNA-----------------------------NKVFRGMAYKD--------- 378
+ +C+ + A N+ + M+ D
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 379 -VVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
VVI+++II + GQ AL + M ++P+ VT+ S+++ H+G I
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPHV--WGALLGACH 494
M+ + + PD + ++D+ G+ G+L A N M ++ P++ + +L+
Sbjct: 242 LSDMM-RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 495 IHHNIK-----MGEVAAKNLFPLDPNHAGYYTLLSNIYCVDKNWHNAAKL 539
IH + + + +K FP +A Y L N YC K + K+
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFP----NAVTYNTLINGYCKAKRVDDGMKI 346
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 209/516 (40%), Gaps = 80/516 (15%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+PD+H + L V L++ + H + + D+ + LI+ + ++ A+
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 66 VFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
+ + P PD +T+++ GY G + AL +M C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF---------------GC 255
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLA----------------NSLLNLYGKTGSIKSA 165
+ S+ + +HGF K ++ L+ N+L+N K G +K A
Sbjct: 256 S-WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 166 ----EILFREMPDKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRA 221
+++ +E D DV +++S+++ G A+++ ++MI + PN VT + +
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 222 CASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAW 281
+ +EE ++ ++ S G +P DV +
Sbjct: 375 LCKENQVEEATELARVLTSKGI-----------------------------LP--DVCTF 403
Query: 282 AVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTK 341
L G T +ME+F M S G PD ++ ++ G L +A+ + +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 342 SGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM----AYKDVVIWSSIIAAYGFHGQGEE 397
SG + +LI+ + K + A ++F M ++ V ++++I + E+
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 398 ALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIM 457
A +L QM KP+K T+ S+L+ G +++ I M + PD YG +
Sbjct: 524 AAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTL 581
Query: 458 VDLLGRMGELDRALDIINNMPMQA---GPHVWGALL 490
+ L + G ++ A ++ ++ M+ PH + ++
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 167/444 (37%), Gaps = 69/444 (15%)
Query: 25 LEVGRMIHGFLKK-------------ENLDG---DMFVGSALIELYSKCGEMNDAVEV-- 66
+ V ++HGF K+ N DG D + + L+ K G + A+E+
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 67 --FMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQL 124
E PDV + S+++G + G + A+ +M + + SP+ VT + S +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKE 378
Query: 125 SDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISW 180
+ + + + G+ + NSL+ T + + A LF EM K D ++
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 181 SSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVS 240
+ ++ G AL++ +M + +T + + A+ E +I
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 241 YGFELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGYAETGMAHK 296
+G + L+D K E+A + +++ K D + L + G K
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 297 SMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIE 356
+ ++ M S+G PD V G L +C
Sbjct: 559 AADIVQAMTSNGCEPDIVT----------YGTLISGLC---------------------- 586
Query: 357 MYAKCSSIDNANKVFRGMAYKDVVI----WSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
K ++ A+K+ R + K + + ++ +I + EA+ LF +M ++
Sbjct: 587 ---KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 413 PNKVTF-ISILSACSHAGLVEEGI 435
P+ V++ I C+ G + E +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAV 667
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 205/511 (40%), Gaps = 38/511 (7%)
Query: 6 RPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVE 65
+P+ HT ++ + S K E R + G + ++ L ++ +ALI Y K G + DAV+
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 66 V--FMEYPK--PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASAC 121
V ME K P+ + ++ GY +S + A+ ++M + +V PD VT S
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKM-LERKVLPDVVTYNSLIDGQ 472
Query: 122 AQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DV 177
+ + + + GL S+++ K+ ++ A LF + K +V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 178 ISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQL 237
+ +++++ Y G A + +M+ K PN +T + + + L+E + +
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 238 AVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGYAETGM 293
V G + + T L+ LK ++A F ++ K D + Y G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 294 AHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGAS 353
+ ++ M +GV PD ++ +LG A + + +G + +++ S
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 354 LI----EM-YAKCSSIDNANKVFRGMAYKDVVI-----------------WSSIIAAYGF 391
LI EM Y K + M D V+ + +I
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 392 HGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDS 451
G A K+F M + + P+++ F ++LS C E + D M+ L P
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL-PQL 831
Query: 452 EHYGIMVDLLGRMGELDRALDIINNMPMQAG 482
E +++ L + GE +R + N+ +Q G
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNL-LQCG 861
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 189/479 (39%), Gaps = 53/479 (11%)
Query: 46 VGSALIELYSKCGEMNDAVEVFMEYPKPDVVLWTSIVTGYERSGTPELALAFFSRMAVLE 105
VG AL L C +MN ++Y K + + +++ R G + + M + +
Sbjct: 156 VGDALYVL-DLCRKMNKDERFELKY-KLIIGCYNTLLNSLARFGLVDEMKQVYMEM-LED 212
Query: 106 EVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA 165
+V P+ T + +L + + + GLD SL+ Y + + SA
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272
Query: 166 EILFREMPDK---------------------------------------DVISWSSMLAC 186
+F EMP K V +++ ++
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ + AL+L EM + I+PN T + + S E+ R++ + G
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 247 TTVSTALMDMYLKCSSPENAVDIF----NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFC 302
AL++ Y K E+AVD+ +R + + L GY ++ + HK+M V
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLN 451
Query: 303 NMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCS 362
ML V PD V ++ G A L + + G +++ S+I+ K
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 363 SIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTF 418
++ A +F + K +VV+++++I Y G+ +EA + +M + + L PN +TF
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTF 570
Query: 419 ISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+++ G ++E + + MV K L P I++ L + G+ D A M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 112/566 (19%), Positives = 217/566 (38%), Gaps = 120/566 (21%)
Query: 40 LDGDMFVGSALIELYSKCGEMNDAVEVFMEYP----KPDVVLWTSIVTGYERSGTPELAL 95
LD D F ++LI Y + +++ A +VF E P + + V +T ++ G + + A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 96 AFFSRM--------------------------------AVLEEVSPDP---VTLVSAASA 120
F +M +EE P V S
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 121 CAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSA----EILFREMPDKD 176
C+Q K R + G + GL ++ N+L+N Y K G I+ A E++ +
Sbjct: 369 CSQCKFEK-ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 177 VISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQ 236
+++ ++ Y + A+ + N+M+++++ P+ VT S + + + ++
Sbjct: 428 TRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 237 LAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETG 292
L G + T+++D K E A D+F+ + +K +VV + L GY + G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 293 MAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGA 352
++ + MLS P+++ ++ + G L++A L + K G
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 353 SLIEMYAKCSSIDNANKVFRGM-------------------------------------- 374
LI K D+A F+ M
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 375 -AYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILS---------- 423
D+ +SS+I YG GQ A + +M + + +P++ TF+S++
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD-TGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 424 ------ACSHAGLVEEGITIFDIMVN------KYQLMPDSEHYGIMVDLLGRMGELDRAL 471
C+ + ++E FD +V ++ + P+++ Y ++ + +G L A
Sbjct: 726 KGSEPELCAMSNMME-----FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 472 DIINNMPMQAG--PH--VWGALLGAC 493
+ ++M G P V+ ALL C
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCC 806
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 280 AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFV 339
+ L A G+ + +V+ ML D V P+ K++ +LG +++A + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 340 TKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQG 395
++G D + + SLI Y + +D+A KVF M K + V ++ +I +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 396 EEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYG 455
+EA+ LF +M + + P T+ ++ + + E + + M + + P+ Y
Sbjct: 305 DEAMDLFVKMKD-DECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYT 362
Query: 456 IMVDLLGRMGELDRALDIINNMPMQAG--PHV--WGALL-GACH---IHHNIKMGEVAAK 507
+++D L + ++A +++ M ++ G P+V + AL+ G C I + + E+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 508 NLFPLDPNHAGYYTLLSNIYCVDKNWHNA 536
L PN Y L+ YC N H A
Sbjct: 422 R--KLSPNTRTYNELIKG-YC-KSNVHKA 446
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 164/413 (39%), Gaps = 66/413 (15%)
Query: 43 DMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFF 98
D + +++I+ K + +A ++F + P+VV++T+++ GY ++G + A
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 99 SRMAVLEEVSPDPVT---LVSAASACAQLSDS--------KLGRS---------IHGFVK 138
+M + + P+ +T L+ A +L ++ K+G IH +K
Sbjct: 556 EKM-LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 139 RCGLDTHLSLANSLLN---------------LYGKTGSIKSAEILFREMPDK----DVIS 179
D S +L+ Y + G + AE + +M + D+ +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 180 WSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASY-LEEGRKIHQLA 238
+SS++ Y D G A D+ M D EP+ T +S ++ Y ++G + A
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
+S E +T V L++ ++ S NA ++ L G E G +
Sbjct: 735 MSNMMEFDTVVE--LLEKMVEHSVTPNAK------------SYEKLILGICEVGNLRVAE 780
Query: 299 EVFCNM-LSDGVRPDAVALVKILTAISELGVLQQAV-CLHAFVTKSGFDNNEYIGASLIE 356
+VF +M ++G+ P + +L+ +L +A + + E +
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 357 MYAKCSSIDNANKVFRGMA----YKDVVIWSSIIAAYGFHGQGEEALKLFYQM 405
+Y K + VF+ + Y+D + W II G G E +LF M
Sbjct: 841 LYKK-GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 184/448 (41%), Gaps = 22/448 (4%)
Query: 48 SALIELYSKCGEMNDAVEVFMEY----PKPDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+ L+ ++K G+ +D F + +P V + ++ + G E A F M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK- 289
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGF--VKRCGLDTHLSLANSLLNLYGKTGS 161
+ PD VT S ++ +L ++ F +K + + N+L+N + K G
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVG--RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 162 IKSAEILFREMP----DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVS 217
+ +REM +V+S+S+++ + G A+ + +M + PN T S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 218 ALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKD 277
+ A L + ++ + G E TAL+D + A ++F ++
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 278 VV----AWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAV 333
V+ ++ L G+ + +++E+ + G++PD + + + L ++ A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 334 CLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYKD----VVIWSSIIAAY 389
+ + + G N I +L++ Y K + + M D VV + +I
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 390 GFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMP 449
+ +A+ F +++N L+ N F +++ VE T+F+ MV K L+P
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVP 646
Query: 450 DSEHYGIMVDLLGRMGELDRALDIINNM 477
D Y ++D + G + AL + + M
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 134/307 (43%), Gaps = 14/307 (4%)
Query: 48 SALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAV 103
+ALI+ M +A E+F + P++ + +++ G+ ++ + AL + +
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 104 LEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK 163
+ PD + + L + + + +K CG+ + + +L++ Y K+G+
Sbjct: 501 -RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 164 SAEILFREMPDKD----VISWSSMLACYADNGAATNALDLFNEMI-DKRIEPNWVTLVSA 218
L EM + D V+++ ++ N + A+D FN + D ++ N +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 219 LRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIP---- 274
+ + +E + + V G + T T+LMD K + A+ + +++
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 275 KKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVC 334
K D++A+ L G + K+ M+ +G+ PD V + +L ELG + +AV
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 335 LHAFVTK 341
L +++ K
Sbjct: 740 LQSYLMK 746
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 149 ANSLLNLYGKTGSIKSAEILFREM----PDKDVISWSSMLACYADNGAATNALDLFNEMI 204
N LL+ + K G + F++M V +++ M+ C G A LF EM
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 205 DKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPE 264
+ + P+ VT S + L++ V + E++ DM C P
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDD-------TVCFFEEMK--------DM---CCEP- 330
Query: 265 NAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
DV+ + L + + G +E + M +G++P+ V+ ++ A
Sbjct: 331 ------------DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNA----NKVFRGMAYKDVV 380
+ G++QQA+ + + + G NEY SLI+ K ++ +A N++ + +VV
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITIFDI 440
++++I + +EA +LF +M + + + PN ++ +++ A ++ + + +
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 441 MVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMP---MQAGPHVWGALLGA 492
+ + + PD YG + L + +++ A ++N M ++A ++ L+ A
Sbjct: 498 LKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 26/355 (7%)
Query: 141 GLDTHLSLANSLLNLYGKTGSIKSAEILFREM----PDKDVISWSSMLACYADNGAATNA 196
GL TH N LLN K G I+ A+ L REM P + +S+++++ A
Sbjct: 155 GLITH----NHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 197 LDLFNEMIDKRIEPNWVT---LVSALRACASASYLEEGRKIHQLAV---SYGFELETTVS 250
L LFN M I PN VT +V AL C +K+ + + L+ +
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHAL--CQKGVIGNNNKKLLEEILDSSQANAPLDIVIC 268
Query: 251 TALMDMYLKCSSPENAVDIFNRIPKKDV----VAWAVLFGGYAETGMAHKSMEVFCNMLS 306
T LMD K + A++++ + +K+V V + V+ G +G + C+M+
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
GV PD +++A+ + G +A LH + G ++ +I+ ++
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 367 ANKV----FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
AN+ + +V++W+ +I YG +G AL + M ++ +KPN T +++
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG-VKPNVYTNNALI 447
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
G + + + + M ++ PD+ Y +++ +G L A + + M
Sbjct: 448 HGYVKGGRLIDAWWVKNEM-RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM 501
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/485 (19%), Positives = 198/485 (40%), Gaps = 39/485 (8%)
Query: 28 GRMIHGFLKKENLDG---------------DMFVGSALIELYSKCGEMNDAVEVFMEYPK 72
G ++ G +LDG ++ + + LI+ + + DA+ V E +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 73 ----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSK 128
PD+ + S++ G ++ + A +F M V + P+ T + S + S+
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASEFA 539
Query: 129 LGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDVI----SWSSML 184
++ CG+ + L L+N Y K G + A +R M D+ ++ +++ ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 185 ACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFE 244
N +A ++F EM K I P+ + + + +++ I V G
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 245 LETTVSTALMDMYLKCSSPENAVDIFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEV 300
+ L+ + + E A ++ + + K + V + + GY ++G ++ +
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 301 FCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAK 360
F M G+ PD+ ++ L +++A+ + K G ++ +LI K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFK 778
Query: 361 CSSIDNANKV--------FRGMAYKDVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLK 412
+ +V F + V ++ +I G E A +LF+QM N ++L
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN-ANLM 837
Query: 413 PNKVTFISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALD 472
P +T+ S+L+ G E +FD + + PD Y ++++ + G +AL
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 473 IINNM 477
+++ M
Sbjct: 897 LVDQM 901
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 162/420 (38%), Gaps = 22/420 (5%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
P + S++ GY R M + P T + D +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 133 IHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYA 188
I + G ++ + +L+ + + A + +EM ++ D+ ++S++ +
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 189 DNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETT 248
A EM++ ++PN T + + AS K + G
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 249 VSTALMDMYLK-------CSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVF 301
+ T L++ Y K CS+ + VD + D + VL G + + E+F
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVD---QGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 302 CNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKC 361
M G+ PD + ++ S+LG +Q+A + + + G N I L+ + +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 362 SSIDNANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVT 417
I+ A ++ M+ K + V + +II Y G EA +LF +M L P+
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFV 734
Query: 418 FISILSACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
+ +++ C VE ITIF NK + + +++ + + G+ + +++N +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 143/335 (42%), Gaps = 23/335 (6%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PD + + + L ++ I + +E L ++ + + L+ + + GE+ A E+
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 67 FMEYP----KPDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
E P+ V + +I+ GY +SG A F M L+ + PD + C
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDSFVYTTLVDGCC 743
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIK-SAEILFREMPDK------ 175
+L+D + +I G K+ G + + N+L+N K G + E+L R M
Sbjct: 744 RLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 176 -DVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKI 234
+ ++++ M+ G A +LF++M + + P +T S L E +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 235 HQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVV---------AWAVLF 285
A++ G E + + + +++ +LK A+ + +++ K+ V L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 286 GGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKIL 320
G+A+ G + +V NM+ PD+ +++++
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 149/348 (42%), Gaps = 33/348 (9%)
Query: 152 LLNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKR 207
+++L G+ G + +F EMP + V S+++++ Y NG +L+L + M +++
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 208 IEPNWVTLVSALRACASASYLEEG----------RKIHQLAVSYGFELETTVSTALMDMY 257
I P+ +T + + ACA EG I V+Y L L D
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD-- 264
Query: 258 LKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNML----SDGVRPDA 313
A +F + +V + ET + +E C++L S G PD
Sbjct: 265 -------EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 314 VALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRG 373
+ +L A ++ G +++A+ + + +G N + L+ ++ + D+ ++F
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 374 MAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAG 429
M D ++ +I +G G +E + LF+ M +++P+ T+ I+ AC G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACGKGG 436
Query: 430 LVEEGITIFDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNM 477
L E+ I M ++P S+ Y +++ G+ + AL N M
Sbjct: 437 LHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 168/420 (40%), Gaps = 52/420 (12%)
Query: 2 HATARPDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMN 61
H +PD T + L +C + M+ + + D+ S L+E + K +
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 62 DAVEVFMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSA 117
++ E PD+ + ++ Y +SG+ + A+ F +M
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ--------------- 344
Query: 118 ASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMP---- 173
A+ C +++ + LLNL+G++G LF EM
Sbjct: 345 AAGCTPNANT---------------------YSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 174 DKDVISWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRK 233
D D +++ ++ + + G + LF++M+++ IEP+ T + AC E+ RK
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 234 IHQLAVSYGFELETTVSTALMDMYLKCSSPENAVDIFNRI----PKKDVVAWAVLFGGYA 289
I Q + + T +++ + + + E A+ FN + + + L +A
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 290 ETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEY 349
G+ +S + ++ G+ + + A + G ++AV + + KS D +E
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 350 IGASLIEMYAKCSSIDNANKVFRGMAYKDVV----IWSSIIAAYGFHGQGEEALKLFYQM 405
+++ +Y+ +D + F M D++ + ++A YG + ++ +L +M
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 167/396 (42%), Gaps = 46/396 (11%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
PDV+ ++++V GY R G + + + V++ P + + + KL +
Sbjct: 279 PDVISYSTVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 133 IHGFVK--RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLAC 186
F + R G+ + +L++ + K G I++A F EM + DV++++++++
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ G A LF+EM K +EP+ VT + A ++++ ++H + G
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG---- 451
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
CS +VV + L G + G + E+ M
Sbjct: 452 -------------CSP--------------NVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G++P+ I+ + + G +++AV L +G + + +L++ Y K +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 367 ANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
A ++ + M K +V ++ ++ + HG E+ KL M + PN TF S++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSLV 603
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
++ I+ M ++ + PD + Y +V
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLV 638
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 198/464 (42%), Gaps = 25/464 (5%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMID 205
N +++ + G IK A L M K DVIS+S+++ Y G L M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN 265
K ++PN S + L E + + G +T V T L+D + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 266 AVDIF----NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
A F +R DV+ + + G+ + G ++ ++F M G+ PD+V +++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM----AYK 377
+ G ++ A +H + ++G N +LI+ K +D+AN++ M
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
++ ++SI+ G EEA+KL + + L + VT+ +++ A +G +++ I
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPH--VWGALLGACH 494
M+ K L P + ++++ G L+ ++N M + P+ + +L+
Sbjct: 549 LKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 495 IHHNIKMGEVAAKNLFP--LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
I +N+K K++ + P+ Y L+ +C +N A L +K K
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG-HCKARNMKEAWFLFQEMK----GKGF 662
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
S+ + F+ +F E+ ++F+ +R+ + +E ++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFL-EAREVFDQMRREGLAADKEIFD 705
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 37 KENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPE 92
++ + D V + LI+ + K G++ A + F E PDV+ +T+I++G+ + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 93 LALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
A F M + + PD VT L
Sbjct: 404 EAGKLFHEM-FCKGLEPDSVTF-----------------------------------TEL 427
Query: 153 LNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
+N Y K G +K A + M +V+++++++ G +A +L +EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+PN T S + + +EE K+ + G +T T LMD Y K + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 269 IFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
I + K +V + VL G+ GM ++ ML+ G+ P+A ++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVV 380
L+ A ++ + G + +L++ + K ++ A +F+ M K V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQM 405
+S +I + + EA ++F QM
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 128/317 (40%), Gaps = 22/317 (6%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS T + + ++ +H + + ++ + LI+ K G+++ A E+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 67 FMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
E K P++ + SIV G +SG E A+ ++ D VT + A
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYC 537
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV----I 178
+ + + I + GL + N L+N + G ++ E L M K +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
+++S++ Y A ++ +M + + P+ T + ++ A ++E + Q
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
GF + + + L+ +LK A ++F+++ ++ + A +F +++T
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK---- 713
Query: 299 EVFCNMLSDGVRPDAVA 315
G RPD +
Sbjct: 714 ---------GKRPDTIV 721
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 167/396 (42%), Gaps = 46/396 (11%)
Query: 73 PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRS 132
PDV+ ++++V GY R G + + + V++ P + + + KL +
Sbjct: 279 PDVISYSTVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 133 IHGFVK--RCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLAC 186
F + R G+ + +L++ + K G I++A F EM + DV++++++++
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 187 YADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELE 246
+ G A LF+EM K +EP+ VT + A ++++ ++H + G
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG---- 451
Query: 247 TTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLS 306
CS +VV + L G + G + E+ M
Sbjct: 452 -------------CSP--------------NVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 307 DGVRPDAVALVKILTAISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDN 366
G++P+ I+ + + G +++AV L +G + + +L++ Y K +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 367 ANKVFRGMAYK----DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISIL 422
A ++ + M K +V ++ ++ + HG E+ KL M + PN TF S++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSLV 603
Query: 423 SACSHAGLVEEGITIFDIMVNKYQLMPDSEHYGIMV 458
++ I+ M ++ + PD + Y +V
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLV 638
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 198/464 (42%), Gaps = 25/464 (5%)
Query: 150 NSLLNLYGKTGSIKSAEILFREMPDK----DVISWSSMLACYADNGAATNALDLFNEMID 205
N +++ + G IK A L M K DVIS+S+++ Y G L M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 206 KRIEPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPEN 265
K ++PN S + L E + + G +T V T L+D + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 266 AVDIF----NRIPKKDVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILT 321
A F +R DV+ + + G+ + G ++ ++F M G+ PD+V +++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 322 AISELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGM----AYK 377
+ G ++ A +H + ++G N +LI+ K +D+AN++ M
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 378 DVVIWSSIIAAYGFHGQGEEALKLFYQMANHSDLKPNKVTFISILSACSHAGLVEEGITI 437
++ ++SI+ G EEA+KL + + L + VT+ +++ A +G +++ I
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 438 FDIMVNKYQLMPDSEHYGIMVDLLGRMGELDRALDIINNMPMQA-GPH--VWGALLGACH 494
M+ K L P + ++++ G L+ ++N M + P+ + +L+
Sbjct: 549 LKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 495 IHHNIKMGEVAAKNLFP--LDPNHAGYYTLLSNIYCVDKNWHNAAKLRSLIKENRLKKVL 552
I +N+K K++ + P+ Y L+ +C +N A L +K K
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG-HCKARNMKEAWFLFQEMK----GKGF 662
Query: 553 GQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDVKMREECYE 596
S+ + F+ +F E+ ++F+ +R+ + +E ++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFL-EAREVFDQMRREGLAADKEIFD 705
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 37 KENLDGDMFVGSALIELYSKCGEMNDAVEVFMEYPK----PDVVLWTSIVTGYERSGTPE 92
++ + D V + LI+ + K G++ A + F E PDV+ +T+I++G+ + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 93 LALAFFSRMAVLEEVSPDPVTLVSAASACAQLSDSKLGRSIHGFVKRCGLDTHLSLANSL 152
A F M + + PD VT L
Sbjct: 404 EAGKLFHEM-FCKGLEPDSVTF-----------------------------------TEL 427
Query: 153 LNLYGKTGSIKSAEILFREMPD----KDVISWSSMLACYADNGAATNALDLFNEMIDKRI 208
+N Y K G +K A + M +V+++++++ G +A +L +EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 209 EPNWVTLVSALRACASASYLEEGRKIHQLAVSYGFELETTVSTALMDMYLKCSSPENAVD 268
+PN T S + + +EE K+ + G +T T LMD Y K + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 269 IFNRIPKK----DVVAWAVLFGGYAETGMAHKSMEVFCNMLSDGVRPDAVALVKILTAIS 324
I + K +V + VL G+ GM ++ ML+ G+ P+A ++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 325 ELGVLQQAVCLHAFVTKSGFDNNEYIGASLIEMYAKCSSIDNANKVFRGMAYK----DVV 380
L+ A ++ + G + +L++ + K ++ A +F+ M K V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 381 IWSSIIAAYGFHGQGEEALKLFYQM 405
+S +I + + EA ++F QM
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 128/317 (40%), Gaps = 22/317 (6%)
Query: 7 PDSHTVSIALKSCVGLQKLEVGRMIHGFLKKENLDGDMFVGSALIELYSKCGEMNDAVEV 66
PDS T + + ++ +H + + ++ + LI+ K G+++ A E+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 67 FMEYPK----PDVVLWTSIVTGYERSGTPELALAFFSRMAVLEEVSPDPVTLVSAASACA 122
E K P++ + SIV G +SG E A+ ++ D VT + A
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYC 537
Query: 123 QLSDSKLGRSIHGFVKRCGLDTHLSLANSLLNLYGKTGSIKSAEILFREMPDKDV----I 178
+ + + I + GL + N L+N + G ++ E L M K +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 179 SWSSMLACYADNGAATNALDLFNEMIDKRIEPNWVTLVSALRACASASYLEEGRKIHQLA 238
+++S++ Y A ++ +M + + P+ T + ++ A ++E + Q
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 239 VSYGFELETTVSTALMDMYLKCSSPENAVDIFNRIPKKDVVAWAVLFGGYAETGMAHKSM 298
GF + + + L+ +LK A ++F+++ ++ + A +F +++T
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK---- 713
Query: 299 EVFCNMLSDGVRPDAVA 315
G RPD +
Sbjct: 714 ---------GKRPDTIV 721