Miyakogusa Predicted Gene
- Lj0g3v0269349.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0269349.1 tr|B9MZ67|B9MZ67_POPTR Chromatin remodeling
complex subunit OS=Populus trichocarpa GN=CHR952 PE=4
SV,49.15,0.000000000000001,seg,NULL; HELICASE_CTER,Helicase,
C-terminal; no description,NULL; SUBFAMILY NOT NAMED,NULL;
SWI/SNF,CUFF.17791.1
(846 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 375 e-104
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 375 e-104
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 163 6e-40
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 127 4e-29
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 119 1e-26
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 117 2e-26
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 115 1e-25
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 104 2e-22
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 100 5e-21
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 99 1e-20
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 95 2e-19
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 94 3e-19
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 94 4e-19
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 94 4e-19
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 94 4e-19
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 94 5e-19
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 94 5e-19
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 93 9e-19
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 92 1e-18
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 81 3e-15
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 77 4e-14
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 74 3e-13
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 74 4e-13
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 74 5e-13
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 74 6e-13
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 73 9e-13
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 73 9e-13
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 70 9e-12
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 60 6e-09
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 59 1e-08
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 56 9e-08
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 56 1e-07
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 52 1e-06
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 52 1e-06
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 52 1e-06
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 52 1e-06
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 52 2e-06
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 307/543 (56%), Gaps = 54/543 (9%)
Query: 344 FVEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDE 403
+ EYWVPVQ+SDVQLEQYC L + L S SK+D +GA+ + L S+RK C+HPYV+D
Sbjct: 477 YPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDHPYVMDA 535
Query: 404 HLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGD 463
L++LL + L+ E L V+IKASGKL LLD ML +KK L+ ++ +Q+ L+G+
Sbjct: 536 SLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGN 595
Query: 464 ILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSV 523
IL+DF+ QRFGP SYE + SKK +A+ FN K ++ LLET AC +IKL
Sbjct: 596 ILEDFVGQRFGPKSYEH---GIYSSKKNSAINNFN-KESQCCVLLLETRACSQTIKLLRA 651
Query: 524 DTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINL 583
D I+F S NP +D++ ++KI ++S + K+FRLYS TVEE+AL A+Q+K + +
Sbjct: 652 DAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQNKAV 711
Query: 584 QNMNRGISHMLLMWSAPCLFDELKVFHDDAASTPSLKSLFGQPLLKQAIDEFRSVLSQDG 643
+N+NR ++H LLMW A LFD+L FH ++ TP F Q ++ I EF S+LS G
Sbjct: 712 ENLNRSLTHALLMWGASYLFDKLDHFH--SSETPDSGVSFEQSIMDGVIHEFSSILSSKG 769
Query: 644 EDTDANNCSILLKVKVQQKELTYRGHFSLLGELKIGLLDEEAPQIFWPKLLEGKHFCWKY 703
+ + +LL+ K Q TY +L GE I L DEE+P IFW KLL GK+ WKY
Sbjct: 770 GEENEVKLCLLLEAKHAQG--TYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKY 827
Query: 704 SSNLFQRSRKKVHYFNGSVDRPDAVTEGILKKRKKVSSNVVD----HPSSKSEDENLSNG 759
S+ QR+RK+V YF GS P G KKRKK S +V D P ++ S
Sbjct: 828 PSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPRVTDPPVDDDERKASGK 887
Query: 760 IKEGASGDLVDRPHVNVVESEKK-----GTVHG--------------------------- 787
GA ++ P V ++S K GT+ G
Sbjct: 888 DHMGA----LESPKVITLQSSCKSSGTDGTLDGNDAFGLYSMGSHISGIPEDMLASQDWG 943
Query: 788 -----EQRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQ 842
QR H +LKP++ KLC+VL L D SMV NFL+YV+ NH I E QAFQ
Sbjct: 944 KIPDESQRRLHTVLKPKMAKLCQVLHLSDACTSMVGNFLEYVIENHRIYEEPATTFQAFQ 1003
Query: 843 LSL 845
++L
Sbjct: 1004 IAL 1006
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%)
Query: 32 PSPTESDTTGVRRSARETXXXXXXXXXXXARKSERLEKGTPPSPA-VSKKSERVEKKNMP 90
P+ E +T G+RRS+R T RKSERL PSPA VSKKS + K + P
Sbjct: 24 PASVEQETPGLRRSSRGTPSTKVITPASATRKSERLA----PSPASVSKKSGGIVKNSTP 79
Query: 91 SPLRRSGRARGQXXXXXXXXXXXXXXXXXXXXXVKQVTLEAKEVNQSEEHDPETLQVKVK 150
S LRRS R + + ++Q +E K+K
Sbjct: 80 SSLRRSNRGKTEVSLQSSKGSDNSIRKGDTSPDIEQRKDSVEESTD-----------KIK 128
Query: 151 R-MDARMYRSLFK-KPKEGSSVPSNTPTNETCMV 182
M AR YR+LF+ K KE ++ +P E +V
Sbjct: 129 PIMSARSYRALFRGKLKESEALVDASPNEEELVV 162
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 307/543 (56%), Gaps = 54/543 (9%)
Query: 344 FVEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDE 403
+ EYWVPVQ+SDVQLEQYC L + L S SK+D +GA+ + L S+RK C+HPYV+D
Sbjct: 477 YPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDHPYVMDA 535
Query: 404 HLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGD 463
L++LL + L+ E L V+IKASGKL LLD ML +KK L+ ++ +Q+ L+G+
Sbjct: 536 SLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGN 595
Query: 464 ILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSV 523
IL+DF+ QRFGP SYE + SKK +A+ FN K ++ LLET AC +IKL
Sbjct: 596 ILEDFVGQRFGPKSYEH---GIYSSKKNSAINNFN-KESQCCVLLLETRACSQTIKLLRA 651
Query: 524 DTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINL 583
D I+F S NP +D++ ++KI ++S + K+FRLYS TVEE+AL A+Q+K + +
Sbjct: 652 DAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQNKAV 711
Query: 584 QNMNRGISHMLLMWSAPCLFDELKVFHDDAASTPSLKSLFGQPLLKQAIDEFRSVLSQDG 643
+N+NR ++H LLMW A LFD+L FH ++ TP F Q ++ I EF S+LS G
Sbjct: 712 ENLNRSLTHALLMWGASYLFDKLDHFH--SSETPDSGVSFEQSIMDGVIHEFSSILSSKG 769
Query: 644 EDTDANNCSILLKVKVQQKELTYRGHFSLLGELKIGLLDEEAPQIFWPKLLEGKHFCWKY 703
+ + +LL+ K Q TY +L GE I L DEE+P IFW KLL GK+ WKY
Sbjct: 770 GEENEVKLCLLLEAKHAQG--TYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKY 827
Query: 704 SSNLFQRSRKKVHYFNGSVDRPDAVTEGILKKRKKVSSNVVD----HPSSKSEDENLSNG 759
S+ QR+RK+V YF GS P G KKRKK S +V D P ++ S
Sbjct: 828 PSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPRVTDPPVDDDERKASGK 887
Query: 760 IKEGASGDLVDRPHVNVVESEKK-----GTVHG--------------------------- 787
GA ++ P V ++S K GT+ G
Sbjct: 888 DHMGA----LESPKVITLQSSCKSSGTDGTLDGNDAFGLYSMGSHISGIPEDMLASQDWG 943
Query: 788 -----EQRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQ 842
QR H +LKP++ KLC+VL L D SMV NFL+YV+ NH I E QAFQ
Sbjct: 944 KIPDESQRRLHTVLKPKMAKLCQVLHLSDACTSMVGNFLEYVIENHRIYEEPATTFQAFQ 1003
Query: 843 LSL 845
++L
Sbjct: 1004 IAL 1006
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%)
Query: 32 PSPTESDTTGVRRSARETXXXXXXXXXXXARKSERLEKGTPPSPA-VSKKSERVEKKNMP 90
P+ E +T G+RRS+R T RKSERL PSPA VSKKS + K + P
Sbjct: 24 PASVEQETPGLRRSSRGTPSTKVITPASATRKSERLA----PSPASVSKKSGGIVKNSTP 79
Query: 91 SPLRRSGRARGQXXXXXXXXXXXXXXXXXXXXXVKQVTLEAKEVNQSEEHDPETLQVKVK 150
S LRRS R + + ++Q +E K+K
Sbjct: 80 SSLRRSNRGKTEVSLQSSKGSDNSIRKGDTSPDIEQRKDSVEESTD-----------KIK 128
Query: 151 R-MDARMYRSLFK-KPKEGSSVPSNTPTNETCMV 182
M AR YR+LF+ K KE ++ +P E +V
Sbjct: 129 PIMSARSYRALFRGKLKESEALVDASPNEEELVV 162
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 163 bits (412), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 162/293 (55%), Gaps = 27/293 (9%)
Query: 324 QLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEILRSSSKVD 379
+LK ++ + R K D+ + + E VPV+++ +Q E Y A+L KN +ILR+ K
Sbjct: 901 ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGV 960
Query: 380 SVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD----EFL-GVDIKASGKLQLLDS 434
+ ++ +I++ +RK CNHPY++ G +P+ EFL + IKAS KL LL S
Sbjct: 961 AQQSMLNIVMQLRKVCNHPYLI---------PGTEPESGSLEFLHDMRIKASAKLTLLHS 1011
Query: 435 MLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAM 494
ML L K+ R LI Q + DIL+D+L FGP ++ER+D S+ + + AA+
Sbjct: 1012 MLKVLHKEGHRVLIFSQMTK------LLDILEDYLNIEFGPKTFERVDGSVAVADRQAAI 1065
Query: 495 KKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLI 554
+FN N RF FLL T AC I L++ DT+II+DSD+NP DI+++ + Q K +
Sbjct: 1066 ARFNQDKN-RFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1124
Query: 555 KMFRLYSAFTVEERALSFAKQDKTLDINLQNMNRGISHM--LLMWSAPCLFDE 605
++RL +VEER L AK+ LD N + +L W LF++
Sbjct: 1125 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFND 1177
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 167/321 (52%), Gaps = 42/321 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S +Q E Y AI +N ++L
Sbjct: 487 NQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVL 546
Query: 373 RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP-----DEFLGVDIKASG 427
+ K + ++ +I++ +RK C HPY++ EG++P +E +++ G
Sbjct: 547 --TKKGGAQISLNNIMMELRKVCCHPYML---------EGVEPVIHDANEAFKQLLESCG 595
Query: 428 KLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPP 487
KLQLLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 596 KLQLLDKMMVKLKEQGHRVLIYTQF------QHMLDLLEDYCTHK--KWQYERIDGKVGG 647
Query: 488 SKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITL 547
+++ + +FN KN+ +F FLL T A I L++ DT+II+DSDWNP D++++ +
Sbjct: 648 AERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 707
Query: 548 DSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSAPC 601
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 708 LGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKE 767
Query: 602 LF----DEL----KVFHDDAA 614
LF DE K+ +DDAA
Sbjct: 768 LFASEDDEAGKSGKIHYDDAA 788
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 148/279 (53%), Gaps = 35/279 (12%)
Query: 351 VQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLW 410
V +S Q E Y A++ N ++L + K D+ I ++L+ +R+ C+HPY++ + R
Sbjct: 456 VDMSSQQKEVYKAVITNNYQVL--TKKRDA--KISNVLMKLRQVCSHPYLLPDFEPRFE- 510
Query: 411 EGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLR 470
+E ++ASGKLQLLD M+++LK++ R LI Q +L+D+
Sbjct: 511 ---DANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLY------LLEDYFT 561
Query: 471 QRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFD 530
F +YERID + ++ + +FN +N+ RF FLL T A I L++ DT+II+D
Sbjct: 562 --FKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYD 619
Query: 531 SDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMNRGI 590
SDWNP D++++ ++ Q + ++RL TVEER + K +K L L+++ G
Sbjct: 620 SDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK-NKML---LEHLVVGK 675
Query: 591 SHM-------LLMWSAPCLFDEL--------KVFHDDAA 614
H+ ++ + + LF E K+ +DDAA
Sbjct: 676 QHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAA 714
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 148/279 (53%), Gaps = 35/279 (12%)
Query: 351 VQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLW 410
V +S Q E Y A++ N ++L + K D+ I ++L+ +R+ C+HPY++ + R
Sbjct: 415 VDMSSQQKEVYKAVITNNYQVL--TKKRDA--KISNVLMKLRQVCSHPYLLPDFEPRFE- 469
Query: 411 EGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLR 470
+E ++ASGKLQLLD M+++LK++ R LI Q +L+D+
Sbjct: 470 ---DANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLY------LLEDYFT 520
Query: 471 QRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFD 530
F +YERID + ++ + +FN +N+ RF FLL T A I L++ DT+II+D
Sbjct: 521 --FKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYD 578
Query: 531 SDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMNRGI 590
SDWNP D++++ ++ Q + ++RL TVEER + K +K L L+++ G
Sbjct: 579 SDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK-NKML---LEHLVVGK 634
Query: 591 SHM-------LLMWSAPCLFDEL--------KVFHDDAA 614
H+ ++ + + LF E K+ +DDAA
Sbjct: 635 QHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAA 673
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 133/254 (52%), Gaps = 31/254 (12%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEH 404
+E + V++S +Q + Y IL +N L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 859 IERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFE-- 915
Query: 405 LQRLLWEGLKPDEFLGVDIK----------ASGKLQLLDSMLMELKKKDLRTLILFQSIG 454
D G DI +SGKL +LD +L+ L++ R LI Q +
Sbjct: 916 ---------SADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMV- 965
Query: 455 GSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCAC 514
+ DIL ++L R ++R+D S + AM FN ++ F FLL T A
Sbjct: 966 -----RMLDILAEYLSLR--GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAG 1018
Query: 515 LPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAK 574
I L++ DT++IFDSDWNP ND++++ + Q +++ ++R ++ +VEE L AK
Sbjct: 1019 GLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAK 1078
Query: 575 QDKTLD-INLQNMN 587
+ LD + +Q +N
Sbjct: 1079 RKMVLDHLVIQKLN 1092
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 185/438 (42%), Gaps = 74/438 (16%)
Query: 180 CMVPESVQPNFSGEETLQM-SMSNSILDGEL-----VRNGHDGGEMSILSKRKGMTVDMD 233
+ P++V PN+ E L S+S + DG +R GG+ ++L D+
Sbjct: 440 ILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGGKFNVLITH----YDLI 495
Query: 234 SDPSASLSKDDNCNFIPNASPSMSD-----GNVIGTDGPYSKRVRLDYNPKVNESCNPSA 288
A L K D I + + + +GT +R+ L P N S
Sbjct: 496 MRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQN-----SL 550
Query: 289 TEENIVGNINIPALLDSQSNNEKYGLNPNSDDSAFQLKDRLSSDIASRCKSDSCRF---- 344
E + N +P + +S N E++ P ++ + L D I +R F
Sbjct: 551 QELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRR 610
Query: 345 ----VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVG---------AIRDILISI 391
VE ++P Q+ C + + + V VG +++++ + +
Sbjct: 611 KKSEVEKFLP---GKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQL 667
Query: 392 RKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD---------IKASGKLQLLDSMLMELKKK 442
RKCCNHPY+ F+G D ++ASGK +LLD +L +LKK
Sbjct: 668 RKCCNHPYL-----------------FVGADYNMCKKPEIVRASGKFELLDRLLPKLKKA 710
Query: 443 DLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNN 502
R L+ Q + D+L+ +L Y R+D S ++ +K+FN+ ++
Sbjct: 711 GHRILLFSQMTR------LIDLLEIYLS--LNDYMYLRLDGSTKTDQRGILLKQFNEPDS 762
Query: 503 ERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSA 562
F FLL T A + L + DTIIIFDSDWNP D ++ + Q K +++F L S
Sbjct: 763 PYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSI 822
Query: 563 FTVEERALSFAKQDKTLD 580
++EE L AKQ +D
Sbjct: 823 GSIEEVILERAKQKMGID 840
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 29/283 (10%)
Query: 313 GLNPNSDDSAFQ-LKDRLSSDIASRCKS---DSCRFV-----EYWVPVQISDVQLEQYCA 363
GL+ ++D ++ LK L + + R KS +S V E V V + +Q + Y +
Sbjct: 251 GLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS 310
Query: 364 ILLKNAE-ILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD 422
IL K +L SS + ++++I+I +RK C+HPY L+ G++P+ F +
Sbjct: 311 ILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPY---------LFPGIEPEPFEEGE 361
Query: 423 --IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYER 480
++ASGKL +LD +L L R L+ Q DIL DF+ R SYER
Sbjct: 362 HLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTL------DILQDFMELR--RYSYER 413
Query: 481 IDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIR 540
+D S+ ++ AA+K F+ + F F++ T A + L + DT+I ++ DWNP D +
Sbjct: 414 LDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQ 473
Query: 541 SLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINL 583
+LQ+ Q + L + +VEE L A++ L N+
Sbjct: 474 ALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNV 516
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 22/201 (10%)
Query: 383 AIRDILISIRKCCNHPYVV---DEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMEL 439
+++++ + +RKCCNHPY+ D ++ W+ KP+ ++ASGK +LLD +L +L
Sbjct: 677 SLQNLTMQLRKCCNHPYLFVGGDYNM----WK--KPE-----IVRASGKFELLDRLLPKL 725
Query: 440 KKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFND 499
+K R L+ Q LI D+L+ +L Y R+D + ++ +K+FN+
Sbjct: 726 RKAGHRILLFSQMT-----RLI-DVLEIYLT--LNDYKYLRLDGTTKTDQRGLLLKQFNE 777
Query: 500 KNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
++ F FLL T A + L + DT+IIFDSDWNP D ++ + Q K +++F L
Sbjct: 778 PDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 837
Query: 560 YSAFTVEERALSFAKQDKTLD 580
S +VEE L AKQ +D
Sbjct: 838 VSVGSVEEVILERAKQKMGID 858
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 39/293 (13%)
Query: 313 GLNPNSDDSAFQ-LKDRLSSDIASRCKS---DSCRFV-----EYWVPVQISDVQLEQYCA 363
GL+ ++D ++ LK L + + R KS +S V E V V + +Q + Y +
Sbjct: 260 GLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS 319
Query: 364 ILLKNAE-ILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD 422
IL K +L SS + ++++I+I +RK C+HPY L+ G++P+ F +
Sbjct: 320 ILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPY---------LFPGIEPEPFEEGE 370
Query: 423 --IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYER 480
++ASGKL +LD +L L R L+ Q DIL DF+ R SYER
Sbjct: 371 HLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTL------DILQDFMELR--RYSYER 422
Query: 481 IDKSLPPSKKLAAMKKFNDKN----------NERFFFLLETCACLPSIKLSSVDTIIIFD 530
+D S+ ++ AA+K F+ K + F F++ T A + L + DT+I ++
Sbjct: 423 LDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYE 482
Query: 531 SDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINL 583
DWNP D ++LQ+ Q + L + +VEE L A++ L N+
Sbjct: 483 QDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNV 535
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 151/295 (51%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 361 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 420
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E + + + + +I + +RKCCNHPY
Sbjct: 421 LKVGMSQMQKQYYKALLQKDLEAVNAGGERKR---LLNIAMQLRKCCNHPY--------- 468
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I +GK+ LLD +L +LK++D R LI Q + DIL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMT------RLLDIL 522
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L R Y RID + ++ A+++ +N +E+F FLL T A I L++ D
Sbjct: 523 EDYLMYR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +EE+ + A + LD
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 151/295 (51%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 361 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 420
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E + + + + +I + +RKCCNHPY
Sbjct: 421 LKVGMSQMQKQYYKALLQKDLEAVNAGGERKR---LLNIAMQLRKCCNHPY--------- 468
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I +GK+ LLD +L +LK++D R LI Q + DIL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMT------RLLDIL 522
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L R Y RID + ++ A+++ +N +E+F FLL T A I L++ D
Sbjct: 523 EDYLMYR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +EE+ + A + LD
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 151/295 (51%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 361 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 420
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E + + + + +I + +RKCCNHPY
Sbjct: 421 LKVGMSQMQKQYYKALLQKDLEAVNAGGERKR---LLNIAMQLRKCCNHPY--------- 468
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I +GK+ LLD +L +LK++D R LI Q + DIL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMT------RLLDIL 522
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L R Y RID + ++ A+++ +N +E+F FLL T A I L++ D
Sbjct: 523 EDYLMYR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +EE+ + A + LD
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 361 YCAILLKNAEILRSSSKVDSVG-----AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP 415
Y +L+K E + S+G A+ + ++ +R CNHPY+ H + + + P
Sbjct: 1009 YQKLLMKRVE-----DNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEV--NNIIP 1061
Query: 416 DEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGP 475
FL ++ GKL++LD ML +LK D R L S + D+++D+L +
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFF------STMTRLLDVMEDYLTLKGY- 1114
Query: 476 DSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNP 535
Y R+D + A + FN + F FLL A + L + DT+I+FD+DWNP
Sbjct: 1115 -KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNP 1173
Query: 536 VNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
D+++ + Q K + + R + +VEE+ + A+
Sbjct: 1174 QVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEH 1213
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 361 YCAILLKNAEILRSSSKVDSVG-----AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP 415
Y +L+K E + S+G A+ + ++ +R CNHPY+ H + + + P
Sbjct: 1009 YQKLLMKRVE-----DNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEV--NNIIP 1061
Query: 416 DEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGP 475
FL ++ GKL++LD ML +LK D R L S + D+++D+L +
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFF------STMTRLLDVMEDYLTLKGY- 1114
Query: 476 DSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNP 535
Y R+D + A + FN + F FLL A + L + DT+I+FD+DWNP
Sbjct: 1115 -KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNP 1173
Query: 536 VNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
D+++ + Q K + + R + +VEE+ + A+
Sbjct: 1174 QVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEH 1213
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 361 YCAILLKNAEILRSSSKVDSVG-----AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP 415
Y +L+K E + S+G A+ + ++ +R CNHPY+ H + + + P
Sbjct: 1009 YQKLLMKRVE-----DNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEV--NNIIP 1061
Query: 416 DEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGP 475
FL ++ GKL++LD ML +LK D R L S + D+++D+L +
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFF------STMTRLLDVMEDYLTLKGY- 1114
Query: 476 DSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNP 535
Y R+D + A + FN + F FLL A + L + DT+I+FD+DWNP
Sbjct: 1115 -KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNP 1173
Query: 536 VNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
D+++ + Q K + + R + +VEE+ + A+
Sbjct: 1174 QVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEH 1213
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 366 NFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 425
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E++ + + +I + +RKCCNHPY
Sbjct: 426 LKVGMSQMQKQYYKALLQKDLEVVNGGGERKR---LLNIAMQLRKCCNHPY--------- 473
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D + +GK+ LLD +L +LK +D R LI Q + DIL
Sbjct: 474 LFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMT------RLLDIL 527
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L R Y RID + ++ A+++ +N +E+F FLL T A I L++ D
Sbjct: 528 EDYLMYR--GYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +E + + A + LD
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALD 640
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 366 NFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 425
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E++ + + +I + +RKCCNHPY
Sbjct: 426 LKVGMSQMQKQYYKALLQKDLEVVNGGGERKR---LLNIAMQLRKCCNHPY--------- 473
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D + +GK+ LLD +L +LK +D R LI Q + DIL
Sbjct: 474 LFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMT------RLLDIL 527
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L R Y RID + ++ A+++ +N +E+F FLL T A I L++ D
Sbjct: 528 EDYLMYR--GYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +E + + A + LD
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALD 640
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 427 GKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLP 486
GKLQ L +L +LK R LI Q + D+L+ F+ +G +Y R+D S P
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTK------MLDVLEAFI-NLYGY-TYMRLDGSTP 1126
Query: 487 PSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKIT 546
P ++ M++FN N + F F+L T + I L DT+I +DSDWNP D ++ +
Sbjct: 1127 PEERQTLMQRFN-TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1185
Query: 547 LDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-INLQN 585
Q + + ++RL S T+EE L A Q + LD + +QN
Sbjct: 1186 RIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQN 1225
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 361 YCAILLKNAEILRS---SSKVDSV-GAIRDILISI---RKCCNHPYVVD-EHLQRLLWEG 412
+C++ ++ R+ SS+V+ + R+ L I RK CNHP +++ EH +
Sbjct: 662 FCSLTVEQRSTYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSHQ----- 716
Query: 413 LKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQR 472
PD + + SGK++++ +L K++ R L+ Q+ + DIL+ FL
Sbjct: 717 -NPDYG---NPERSGKMKVVAEVLKVWKQQGHRVLLFSQT------QQMLDILESFLVA- 765
Query: 473 FGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSD 532
SY R+D P +++A + +FN+ + + F F+L T L+ + +IIFD D
Sbjct: 766 -NEYSYRRMDGLTPVKQRMALIDEFNN-SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPD 823
Query: 533 WNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERA 569
WNP ND+++ ++ Q K + ++RL + T+EE+
Sbjct: 824 WNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKV 860
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 388 LISIRKCCNHPYVVDEHLQ-----RLLWEG---LKPDEFL-----------GVDIKASGK 428
+ +++K CNHP ++ + ++ + +E P E G ++ SGK
Sbjct: 476 ITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGK 535
Query: 429 LQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPS 488
+ +L +L L++K ++L S D+ R+R P + R+D S S
Sbjct: 536 MHVLSRLLANLRRKTDDRIVLV-----SNYTQTLDLFAQLCRERRYP--FLRLDGSTTIS 588
Query: 489 KKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLD 548
K+ + + ND + F FLL + A + L + +++FD DWNP ND ++ ++ D
Sbjct: 589 KRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRD 648
Query: 549 SQYKLIKMFRLYSAFTVEERA 569
Q K + ++R S T+EE+
Sbjct: 649 GQKKRVYVYRFLSTGTIEEKV 669
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 388 LISIRKCCNHPYVVDEHLQ-----RLLWEG---LKPDEFL-----------GVDIKASGK 428
+ +++K CNHP ++ + ++ + +E P E G ++ SGK
Sbjct: 474 ITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGK 533
Query: 429 LQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPS 488
+ +L +L L++K ++L S D+ R+R P + R+D S S
Sbjct: 534 MHVLSRLLANLRRKTDDRIVLV-----SNYTQTLDLFAQLCRERRYP--FLRLDGSTTIS 586
Query: 489 KKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLD 548
K+ + + ND + F FLL + A + L + +++FD DWNP ND ++ ++ D
Sbjct: 587 KRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRD 646
Query: 549 SQYKLIKMFRLYSAFTVEERA 569
Q K + ++R S T+EE+
Sbjct: 647 GQKKRVYVYRFLSTGTIEEKV 667
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKLQ LD +L L+ + R L+ Q + +IL+D++ R Y R+D S
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTK------MLNILEDYMNYR--KYKYLRLDGSS 1256
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+ ++ F ++ + F FLL T A I L++ DT+I ++SDWNP D++++ +
Sbjct: 1257 TIMDRRDMVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1315
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTL 579
Q K + ++RL TVEE+ L A Q T+
Sbjct: 1316 HRLGQTKDVTVYRLICKETVEEKILHRASQKNTV 1349
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKLQ LD +L L+ + R L+ Q + +IL+D++ R Y R+D S
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTK------MLNILEDYMNYR--KYKYLRLDGSS 1289
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+ ++ F ++ + F FLL T A I L++ DT+I ++SDWNP D++++ +
Sbjct: 1290 TIMDRRDMVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1348
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTL 579
Q K + ++RL TVEE+ L A Q T+
Sbjct: 1349 HRLGQTKDVTVYRLICKETVEEKILHRASQKNTV 1382
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP + + +FL +++ GKL +LD +L++L++ R L+
Sbjct: 1278 MELRKACNHPLLNYPYFNDF------SKDFL---VRSCGKLWILDRILIKLQRTGHRVLL 1328
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
S + DIL+++L+ R Y RID + + +A+ FND + + F FL
Sbjct: 1329 F------STMTKLLDILEEYLQWRRL--VYRRIDGTTSLEDRESAIVDFNDPDTDCFIFL 1380
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
L A + L + DT++I+D D NP N+ +++ + Q + +K+ + + V E+
Sbjct: 1381 LSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEA---VVEK 1437
Query: 569 ALSFAKQDK 577
S K+D+
Sbjct: 1438 LSSHQKEDE 1446
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP + + +FL +++ GKL +LD +L++L++ R L
Sbjct: 1279 MELRKACNHPLLNYPYFNDF------SKDFL---VRSCGKLWILDRILIKLQRTGHRVL- 1328
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
LF ++ + DIL+++L+ R Y RID + + +A+ FND + + F FL
Sbjct: 1329 LFSTM-----TKLLDILEEYLQWRRL--VYRRIDGTTSLEDRESAIVDFNDPDTDCFIFL 1381
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
L A + L + DT++I+D D NP N+ +++ + Q + +K+ + + V E+
Sbjct: 1382 LSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEA---VVEK 1438
Query: 569 ALSFAKQDK 577
S K+D+
Sbjct: 1439 LSSHQKEDE 1447
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 21/196 (10%)
Query: 382 GAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP--DEFLGVDIKASGKLQLLDSMLMEL 439
G + +++I +RK CNHP ++ + L P +E +G GK +LL+ +L+ L
Sbjct: 484 GKLNNLVIQLRKNCNHPDLLQGQIDG---SYLYPPVEEIVG----QCGKFRLLERLLVRL 536
Query: 440 KKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYE--RIDKSLPPSKKLAAMKKF 497
+ + LI Q + DI+D + F +E RID S+ ++ +K F
Sbjct: 537 FANNHKVLIFSQWTK------LLDIMDYY----FSEKGFEVCRIDGSVKLDERRRQIKDF 586
Query: 498 NDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMF 557
+D+ + FLL T A I L++ DT I++DSDWNP D++++ + Q K + ++
Sbjct: 587 SDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 646
Query: 558 RLYSAFTVEERALSFA 573
RL +A ++E R L A
Sbjct: 647 RLSTAQSIETRVLKRA 662
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 346 EYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYV----- 400
E V ++++ Q + Y A L N+EI+ S+ + A L ++K C+HP +
Sbjct: 634 EIVVWLRLTACQRQLYEAFL--NSEIVLSAFDGSPLAA----LTILKKICDHPLLLTKRA 687
Query: 401 ------------------VDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKK 442
V E L + + + D+F + S KL + S+L L +
Sbjct: 688 AEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPE 747
Query: 443 DLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNN 502
R LI Q+ R ++ I D + S+ RID + +L +++F + +
Sbjct: 748 GHRVLIFSQT-----RKMLNLIQDSLTSNGY---SFLRIDGTTKAPDRLKTVEEFQEGHV 799
Query: 503 ERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSA 562
F L L + L+ D +I+ D WNP D +S+ + Q K + ++RL ++
Sbjct: 800 APIFLLTSQVGGL-GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTS 858
Query: 563 FTVEER 568
TVEE+
Sbjct: 859 ATVEEK 864
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 422 DIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERI 481
D+K GK++ L+ ++ K + L+ S+ R L DIL+ FL ++ S+ R+
Sbjct: 523 DVKHCGKMRALEKLMASWISKGDKILLFSYSV----RML--DILEKFLIRK--GYSFARL 574
Query: 482 DKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRS 541
D S P + + + + FN +++ F L+ T A + L S + ++IFD +WNP +D+++
Sbjct: 575 DGSTPTNLRQSLVDDFNASPSKQVF-LISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQA 633
Query: 542 LQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
+ Q + + +FRL SA ++EE L + +Q
Sbjct: 634 QDRSFRYGQKRHVVVFRLLSAGSLEE--LVYTRQ 665
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 445 RTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNER 504
R LI Q + L+ I D + +Y R+D S+ P K+ +K FN
Sbjct: 1832 RVLIFAQH-----KALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTID 1886
Query: 505 FFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFT 564
L L + L+S DT++ + DWNP+ D +++ + Q +++ + RL T
Sbjct: 1887 VLLLTTHVGGL-GLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGT 1945
Query: 565 VEERALSFAK 574
+EE+ +S K
Sbjct: 1946 LEEKVMSLQK 1955
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 445 RTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNER 504
R LI Q + L+ I D + +Y R+D S+ P K+ +K FN
Sbjct: 1863 RVLIFAQH-----KALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTID 1917
Query: 505 FFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFT 564
L L + L+S DT++ + DWNP+ D +++ + Q +++ + RL T
Sbjct: 1918 VLLLTTHVGGL-GLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGT 1976
Query: 565 VEERALSFAK 574
+EE+ +S K
Sbjct: 1977 LEEKVMSLQK 1986
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 401 VDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDL 460
VD +LQ+ W L V + + LLD + M D + L+ QSI DL
Sbjct: 1090 VDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSI--PTLDL 1146
Query: 461 IGDILDDFLRQ-------RFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERF-FFLLETC 512
I L R + G D Y RID S++ + +FN+ +N+R L+ T
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWY-RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTR 1205
Query: 513 ACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
A I L + + +II D WNP D++++ + Q K + +RL + T+EE+
Sbjct: 1206 AGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1261
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 401 VDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDL 460
VD +LQ+ W L V + + LLD + M D + L+ QSI DL
Sbjct: 1090 VDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSI--PTLDL 1146
Query: 461 IGDILDDFLRQ-------RFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERF-FFLLETC 512
I L R + G D Y RID S++ + +FN+ +N+R L+ T
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWY-RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTR 1205
Query: 513 ACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
A I L + + +II D WNP D++++ + Q K + +RL + T+EE+
Sbjct: 1206 AGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1261
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 401 VDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDL 460
VD +LQ+ W L V + + LLD + M D + L+ QSI DL
Sbjct: 1090 VDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSI--PTLDL 1146
Query: 461 IGDILDDFLRQ-------RFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERF-FFLLETC 512
I L R + G D Y RID S++ + +FN+ +N+R L+ T
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWY-RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTR 1205
Query: 513 ACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
A I L + + +II D WNP D++++ + Q K + +RL + T+EE+
Sbjct: 1206 AGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1261
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 401 VDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDL 460
VD +LQ+ W L V + + LLD + M D + L+ QSI DL
Sbjct: 1069 VDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSI--PTLDL 1125
Query: 461 IGDILDDFLRQ-------RFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERF-FFLLETC 512
I L R + G D Y RID S++ + +FN+ +N+R L+ T
Sbjct: 1126 IELYLSRVPRHGKQGKFWKKGKDWY-RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTR 1184
Query: 513 ACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
A I L + + +II D WNP D++++ + Q K + +RL + T+EE+
Sbjct: 1185 AGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1240
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 423 IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERID 482
+ S K + L +L +KK R LI Q S D++ LD +Y R+D
Sbjct: 584 VMLSAKCRTLAELLPSMKKSGHRVLIFSQ--WTSMLDILEWTLDVI------GVTYRRLD 635
Query: 483 KSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSL 542
S + + + FN+ + F LL T A + L+ DT+II D D+NP D ++
Sbjct: 636 GSTQVTDRQTIVDTFNN-DKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAE 694
Query: 543 QKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+ Q K + +FRL + TV+E AK+ LD
Sbjct: 695 DRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLD 732