Miyakogusa Predicted Gene

Lj0g3v0269309.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269309.2 Non Chatacterized Hit- tr|C5Z1J4|C5Z1J4_SORBI
Putative uncharacterized protein Sb10g011520
OS=Sorghu,44.34,2e-19,Dimer_Tnp_hAT,HAT dimerisation; HAT DIMERISATION
DOMAIN-CONTAINING PROTEIN,NULL; UNCHARACTERIZED,NUL,CUFF.17793.2
         (134 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G33406.1 | Symbols:  | hAT dimerisation domain-containing pro...   158   8e-40
AT1G79740.1 | Symbols:  | hAT transposon superfamily | chr1:3000...    92   1e-19
AT4G15020.2 | Symbols:  | hAT transposon superfamily | chr4:8575...    86   8e-18
AT4G15020.1 | Symbols:  | hAT transposon superfamily | chr4:8575...    86   8e-18
AT3G22220.2 | Symbols:  | hAT transposon superfamily | chr3:7839...    82   7e-17
AT3G22220.1 | Symbols:  | hAT transposon superfamily | chr3:7839...    82   7e-17
AT3G17450.1 | Symbols:  | hAT dimerisation domain-containing pro...    75   9e-15
AT3G13030.3 | Symbols:  | hAT transposon superfamily protein | c...    49   1e-06
AT3G13030.2 | Symbols:  | hAT transposon superfamily protein | c...    49   1e-06
AT3G13030.1 | Symbols:  | hAT transposon superfamily protein | c...    49   1e-06
AT5G31412.1 | Symbols:  | hAT transposon superfamily protein | c...    49   1e-06
AT3G13020.1 | Symbols:  | hAT transposon superfamily protein | c...    46   6e-06

>AT5G33406.1 | Symbols:  | hAT dimerisation domain-containing
           protein / transposase-related | chr5:12676126-12678403
           REVERSE LENGTH=509
          Length = 509

 Score =  158 bits (400), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 93/135 (68%), Gaps = 1/135 (0%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTK 60
           +FG   AI  R  ++PA+WW  YG STPNL   AIK+LSLTC A GCERNW VF+ +HTK
Sbjct: 199 LFGIPMAIRLRTKMSPAEWWSAYGSSTPNLQNFAIKVLSLTCSATGCERNWGVFQLLHTK 258

Query: 61  KRNKLEHKRLEDLVFVKYNQELVRRYNIRDELDPISLDDIDESNECLVGTMEEDGDDAGN 120
           +RN+L   RL D++FVKYN+ L RRY   D  DPI L++ID+ NE L G MEE+  D  N
Sbjct: 259 RRNRLTQCRLNDMIFVKYNRALQRRYKRNDTFDPILLNEIDQCNEWLTGRMEENSSDTEN 318

Query: 121 -DRVFPDDDLTWDVV 134
            D VF +DDLTW  V
Sbjct: 319 DDLVFENDDLTWAEV 333


>AT1G79740.1 | Symbols:  | hAT transposon superfamily |
           chr1:30004367-30006715 REVERSE LENGTH=651
          Length = 651

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 2/105 (1%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTK 60
           MFG   A+E R +++P  WW  +G S P L  +AI+ILS  C     ER WS F+Q+H +
Sbjct: 503 MFGCNLAMEARDSVSPGLWWEQFGDSAPVLQRVAIRILSQVCSGYNLERQWSTFQQMHWE 562

Query: 61  KRNKLEHKRLEDLVFVKYNQELVRRYNIRDELDPISLDDIDESNE 105
           +RNK++ + L  L +V  N +L R   +  E DPI+L+DID  +E
Sbjct: 563 RRNKIDREILNKLAYVNQNLKLGRMITL--ETDPIALEDIDMMSE 605


>AT4G15020.2 | Symbols:  | hAT transposon superfamily |
           chr4:8575806-8578372 FORWARD LENGTH=768
          Length = 768

 Score = 85.5 bits (210), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQIHT 59
           +FG   AI  R T+ PA+WW  YG+S  NL+  AI+ILS TC  ++ C RN    E I+ 
Sbjct: 593 VFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSVSCRRNQIPVEHIYQ 652

Query: 60  KKRNKLEHKRLEDLVFVKYNQEL--VRRYNIRDELDPISLDDIDESNECLVG 109
            K N +E KRL DLVFV+YN  L  +   +  D LDP+S + ID   E + G
Sbjct: 653 SK-NSIEQKRLSDLVFVQYNMRLRQLGPGSGDDTLDPLSHNRIDVLKEWVSG 703


>AT4G15020.1 | Symbols:  | hAT transposon superfamily |
           chr4:8575806-8578372 FORWARD LENGTH=768
          Length = 768

 Score = 85.5 bits (210), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQIHT 59
           +FG   AI  R T+ PA+WW  YG+S  NL+  AI+ILS TC  ++ C RN    E I+ 
Sbjct: 593 VFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSVSCRRNQIPVEHIYQ 652

Query: 60  KKRNKLEHKRLEDLVFVKYNQEL--VRRYNIRDELDPISLDDIDESNECLVG 109
            K N +E KRL DLVFV+YN  L  +   +  D LDP+S + ID   E + G
Sbjct: 653 SK-NSIEQKRLSDLVFVQYNMRLRQLGPGSGDDTLDPLSHNRIDVLKEWVSG 703


>AT3G22220.2 | Symbols:  | hAT transposon superfamily |
           chr3:7839808-7842358 REVERSE LENGTH=761
          Length = 761

 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 5/105 (4%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQIHT 59
           +FG   AI  R T+ PA+WW  YG+S  NL+  AI+ILS TC  ++G  RN +   QI+ 
Sbjct: 587 IFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSIGSVRNLTSISQIYE 646

Query: 60  KKRNKLEHKRLEDLVFVKYNQELVR---RYNIRDELDPISLDDID 101
            K N +E +RL DLVFV+YN  L R     +  D +DP+S  +++
Sbjct: 647 SK-NSIERQRLNDLVFVQYNMRLRRIGSESSGDDTVDPLSHSNME 690


>AT3G22220.1 | Symbols:  | hAT transposon superfamily |
           chr3:7839808-7842358 REVERSE LENGTH=761
          Length = 761

 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 5/105 (4%)

Query: 1   MFGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQIHT 59
           +FG   AI  R T+ PA+WW  YG+S  NL+  AI+ILS TC  ++G  RN +   QI+ 
Sbjct: 587 IFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSIGSVRNLTSISQIYE 646

Query: 60  KKRNKLEHKRLEDLVFVKYNQELVR---RYNIRDELDPISLDDID 101
            K N +E +RL DLVFV+YN  L R     +  D +DP+S  +++
Sbjct: 647 SK-NSIERQRLNDLVFVQYNMRLRRIGSESSGDDTVDPLSHSNME 690


>AT3G17450.1 | Symbols:  | hAT dimerisation domain-containing
           protein | chr3:5972793-5975684 REVERSE LENGTH=877
          Length = 877

 Score = 75.5 bits (184), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 5/98 (5%)

Query: 2   FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFEQIHTKK 61
           FG+  AI  R  + P+ WW+ +G S   L  +A++ILS TC ++GCE  WSV++Q++++ 
Sbjct: 707 FGTDIAIGTRTELDPSAWWQQHGISCLELQRVAVRILSHTCSSVGCEPKWSVYDQVNSQC 766

Query: 62  RNKLEHKRLEDLVFVKYN-----QELVRRYNIRDELDP 94
           +++   K  +DL +V YN     ++L +R +  DE  P
Sbjct: 767 QSQFGKKSTKDLTYVHYNLRLREKQLKQRLHYEDEPPP 804


>AT3G13030.3 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 2   FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQ-IHT 59
           F      +Q   I+PA+WW       P L  LAIKILS TC GA   +   S+ E+ + +
Sbjct: 446 FNEASQADQITGISPAEWWAHKASQYPELQSLAIKILSQTCEGASKYKLKRSLAEKLLLS 505

Query: 60  KKRNKLEHKRLEDLVFVKYNQEL-VRRYNIRDELD 93
           +  +  E + L++LVFV+YN  L   +  + +E+D
Sbjct: 506 EGMSNRERQHLDELVFVQYNLHLQSYKAKLSEEID 540


>AT3G13030.2 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 2   FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQ-IHT 59
           F      +Q   I+PA+WW       P L  LAIKILS TC GA   +   S+ E+ + +
Sbjct: 446 FNEASQADQITGISPAEWWAHKASQYPELQSLAIKILSQTCEGASKYKLKRSLAEKLLLS 505

Query: 60  KKRNKLEHKRLEDLVFVKYNQEL-VRRYNIRDELD 93
           +  +  E + L++LVFV+YN  L   +  + +E+D
Sbjct: 506 EGMSNRERQHLDELVFVQYNLHLQSYKAKLSEEID 540


>AT3G13030.1 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 2   FGSKFAIEQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQ-IHT 59
           F      +Q   I+PA+WW       P L  LAIKILS TC GA   +   S+ E+ + +
Sbjct: 446 FNEASQADQITGISPAEWWAHKASQYPELQSLAIKILSQTCEGASKYKLKRSLAEKLLLS 505

Query: 60  KKRNKLEHKRLEDLVFVKYNQEL-VRRYNIRDELD 93
           +  +  E + L++LVFV+YN  L   +  + +E+D
Sbjct: 506 EGMSNRERQHLDELVFVQYNLHLQSYKAKLSEEID 540


>AT5G31412.1 | Symbols:  | hAT transposon superfamily protein |
           chr5:11541463-11543768 REVERSE LENGTH=433
          Length = 433

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 28/47 (59%)

Query: 9   EQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTCGALGCERNWSVFE 55
           + +G +    WW +YG   P L  LAIKILSLT  +   ERNWS FE
Sbjct: 329 KMKGRLDSWNWWSLYGCHVPTLQRLAIKILSLTPSSSSFERNWSAFE 375


>AT3G13020.1 | Symbols:  | hAT transposon superfamily protein |
           chr3:4166995-4168917 REVERSE LENGTH=605
          Length = 605

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 9   EQRGTIAPAQWWRMYGQSTPNLTWLAIKILSLTC-GALGCERNWSVFEQ-IHTKKRNKLE 66
           +Q   I+P  WW       P L   AIKILS TC GA   +   S+ E+ + T+  +  E
Sbjct: 525 DQISGISPIDWWTEKASQHPELQSFAIKILSQTCEGASRYKLKRSLAEKLLLTEGMSHCE 584

Query: 67  HKRLEDLVFVKYNQEL 82
            K LE+L FV YN  L
Sbjct: 585 RKHLEELAFVHYNLHL 600