Miyakogusa Predicted Gene

Lj0g3v0268859.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268859.2 Non Chatacterized Hit- tr|I1LMP2|I1LMP2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57091 PE,95.79,0,26S
PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBU,CUFF.17763.2
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05780.1 | Symbols: RPN8A, AE3, ATHMOV34 | RP non-ATPase subu...   567   e-162
AT3G11270.1 | Symbols: MEE34 | Mov34/MPN/PAD-1 family protein | ...   563   e-161
AT5G05780.2 | Symbols: RPN8A | RP non-ATPase subunit 8A | chr5:1...   557   e-159
AT3G11270.2 | Symbols: MEE34 | Mov34/MPN/PAD-1 family protein | ...   552   e-157
AT2G39990.1 | Symbols: EIF2, AteIF3f, eIF3F | eukaryotic transla...   100   1e-21
AT4G26430.1 | Symbols: CSN6B | COP9 signalosome subunit 6B | chr...    95   7e-20
AT5G56280.1 | Symbols: CSN6A | COP9 signalosome subunit 6A | chr...    92   6e-19

>AT5G05780.1 | Symbols: RPN8A, AE3, ATHMOV34 | RP non-ATPase subunit
           8A | chr5:1735862-1738176 FORWARD LENGTH=308
          Length = 308

 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/300 (92%), Positives = 291/300 (97%)

Query: 1   MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
           MDVIKTQQIS+R IEKVVVHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS +G VDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60

Query: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
           YAVPFEEDDKDPSIWFLDHNYHESMF MFKRINAKEHVVGWYSTGPKLRENDLDVH LFN
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120

Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
            YVPNPVLVIIDV+PKELGIPTKAYY VEEVKENATQKSQKVFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGV 180

Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
           EHLLRDVKDTTISTLATEV+AKLTALKGLDARL+EIRSYLDLVI+GKLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQD 240

Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
           VFNLLPNLNV++L+KAF+VKTNDMMLVIYLSSLIRSVIALHNLINNK+LNKEHE+AEDSK
Sbjct: 241 VFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSK 300


>AT3G11270.1 | Symbols: MEE34 | Mov34/MPN/PAD-1 family protein |
           chr3:3528989-3531317 FORWARD LENGTH=310
          Length = 310

 Score =  563 bits (1450), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/300 (91%), Positives = 291/300 (97%)

Query: 1   MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
           MDVIKTQQIS+R IEKV+VHPLVLLSIVD+YNRVAKDT KRVVGVLLGSS +GTVDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVIVHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSSSRGTVDVTNS 60

Query: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
           YAVPFEEDDKD SIWFLDHNYHESMF MFKRINAKEH+VGWYSTGPKLRENDLDVH LFN
Sbjct: 61  YAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFN 120

Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
            YVPNPVLVIIDV+PKELGIPTKAYY VEEVKENATQKSQ+VFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGV 180

Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
           EHLLRDVKDTTISTLATEV+AKLTALKGLDARL+EIR+YLDLVI+GKLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQD 240

Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
           VFNLLPNLNV++L+KAFAVKTNDMMLVIYLSSLIRSVIALH+LINNK+LNKEHE+AEDSK
Sbjct: 241 VFNLLPNLNVNELVKAFAVKTNDMMLVIYLSSLIRSVIALHSLINNKLLNKEHEKAEDSK 300


>AT5G05780.2 | Symbols: RPN8A | RP non-ATPase subunit 8A |
           chr5:1735862-1738176 FORWARD LENGTH=305
          Length = 305

 Score =  557 bits (1435), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/300 (91%), Positives = 288/300 (96%), Gaps = 3/300 (1%)

Query: 1   MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
           MDVIKTQQIS+R IEKVVVHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS +G VDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60

Query: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
           YAVPFEEDDKDPSIWFLDHNYHESMF MFKRINAKEHVVGWYSTGPKLRENDLDVH LFN
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120

Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
            YVPNPVLVIIDV+PKELGIPTKAYY VE   ENATQKSQKVFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVE---ENATQKSQKVFVHVSTEIAAHEVEEIGV 177

Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
           EHLLRDVKDTTISTLATEV+AKLTALKGLDARL+EIRSYLDLVI+GKLPLNHEILYHLQD
Sbjct: 178 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQD 237

Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
           VFNLLPNLNV++L+KAF+VKTNDMMLVIYLSSLIRSVIALHNLINNK+LNKEHE+AEDSK
Sbjct: 238 VFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSK 297


>AT3G11270.2 | Symbols: MEE34 | Mov34/MPN/PAD-1 family protein |
           chr3:3528989-3531317 FORWARD LENGTH=307
          Length = 307

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/300 (90%), Positives = 288/300 (96%), Gaps = 3/300 (1%)

Query: 1   MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60
           MDVIKTQQIS+R IEKV+VHPLVLLSIVD+YNRVAKDT KRVVGVLLGSS +GTVDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVIVHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSSSRGTVDVTNS 60

Query: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFN 120
           YAVPFEEDDKD SIWFLDHNYHESMF MFKRINAKEH+VGWYSTGPKLRENDLDVH LFN
Sbjct: 61  YAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFN 120

Query: 121 DYVPNPVLVIIDVEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGV 180
            YVPNPVLVIIDV+PKELGIPTKAYY VE   ENATQKSQ+VFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVE---ENATQKSQQVFVHVPTEIAAHEVEEIGV 177

Query: 181 EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240
           EHLLRDVKDTTISTLATEV+AKLTALKGLDARL+EIR+YLDLVI+GKLPLNHEILYHLQD
Sbjct: 178 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQD 237

Query: 241 VFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300
           VFNLLPNLNV++L+KAFAVKTNDMMLVIYLSSLIRSVIALH+LINNK+LNKEHE+AEDSK
Sbjct: 238 VFNLLPNLNVNELVKAFAVKTNDMMLVIYLSSLIRSVIALHSLINNKLLNKEHEKAEDSK 297


>AT2G39990.1 | Symbols: EIF2, AteIF3f, eIF3F | eukaryotic
           translation initiation factor 2 | chr2:16698332-16699929
           REVERSE LENGTH=293
          Length = 293

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 17/234 (7%)

Query: 19  VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVTNSYAVPFEEDDKDPSIWFL 77
           +HPLV+ ++ D + R   D+ +RV+G LLGS    GTVD+ NSYAVP  E     ++   
Sbjct: 30  IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85

Query: 78  DHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVHGLFNDYVPNPVLVIIDVEPKE 137
           D +YH +M +   ++N+KE +VGWYSTG  +      +H  +   VPNP+ + +D     
Sbjct: 86  DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTN 145

Query: 138 LGIPTKAYYTVEEVKENATQKSQKVFVHVQS---EIAAHEVEEIGVEHLLRDVKDTTIST 194
                KA+     V  N +   +++  H Q    ++   + E +G + L    K T++  
Sbjct: 146 GEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVDK 196

Query: 195 LATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNL 248
           L  ++      ++ L   + ++  Y+D V+ G++  ++ I   + D    LP L
Sbjct: 197 LPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKL 250


>AT4G26430.1 | Symbols: CSN6B | COP9 signalosome subunit 6B |
           chr4:13355229-13357326 FORWARD LENGTH=317
          Length = 317

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 39/308 (12%)

Query: 19  VHPLVLLSIVDNYNRVAKD----------------------TRKRVVGVLLGSSFKGTVD 56
           +HPLV+L+I D++ RV                            RV G ++G     TV+
Sbjct: 13  LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVE 72

Query: 57  VTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVH 116
           + NS+ + F     DP++  LD ++ E    ++K++    +V+GWYSTG    E+D+ +H
Sbjct: 73  IFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIH 127

Query: 117 GLFNDYVPNPVLVIID--VEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHE 174
               D   +PV V+++  +   +  +P   Y +   V +      Q +FVH    I   E
Sbjct: 128 KALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGI---PQSIFVHTSYTIETVE 184

Query: 175 VEEIGVEHLLRDVKDTTISTLATEVSAKLT----ALKGLDARLKEIRSYLDLVIDGKLPL 230
            E I V+H+   +K +   + AT+++A LT    A+K L++R++ +  ++  +  G  P 
Sbjct: 185 AERISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGDKPC 243

Query: 231 NHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLIN--NKM 288
            + +L  +  +   LP        + F ++ ND +L+ YL+ +      ++ +++  N  
Sbjct: 244 ENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVDKFNTA 303

Query: 289 LNKEHERA 296
            +K   R 
Sbjct: 304 YDKHSRRG 311


>AT5G56280.1 | Symbols: CSN6A | COP9 signalosome subunit 6A |
           chr5:22783617-22785530 REVERSE LENGTH=317
          Length = 317

 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 39/305 (12%)

Query: 19  VHPLVLLSIVDNYNRVAKD----------------------TRKRVVGVLLGSSFKGTVD 56
           +HPLV+++I D+Y RV                            RV G ++G     TV+
Sbjct: 13  LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVE 72

Query: 57  VTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDVH 116
           + NS+ + +     DPS   LD ++ E    ++K++    +++GWYSTG    E+D+ +H
Sbjct: 73  IFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIH 127

Query: 117 GLFNDYVPNPVLVIID--VEPKELGIPTKAYYTVEEVKENATQKSQKVFVHVQSEIAAHE 174
               D   +PV V+++  +   +  +P   Y +   V +      Q +F H    I   E
Sbjct: 128 KALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI---PQLIFAHTSYTIETVE 184

Query: 175 VEEIGVEHLLRDVKDTTISTLATEVSAKLT----ALKGLDARLKEIRSYLDLVIDGKLPL 230
            E I V+H+   +K +   + AT+++A LT    A+K L++R++ +   L  +  G    
Sbjct: 185 AERISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSC 243

Query: 231 NHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLN 290
           ++ +L  +  +   LP +        F ++ ND +L+ YL+ +      ++ +++    N
Sbjct: 244 DNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITNCSSNMNEMVDK--FN 301

Query: 291 KEHER 295
             ++R
Sbjct: 302 TAYDR 306