Miyakogusa Predicted Gene

Lj0g3v0268509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268509.1 tr|D8LCX0|D8LCX0_ECTSI Nucleotidyltransferase
OS=Ectocarpus siliculosus GN=Esi_0111_0086 PE=4
SV=1,40,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,gene.g20820.t1.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01220.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   252   1e-67
AT2G01220.2 | Symbols:  | Nucleotidylyl transferase superfamily ...   252   1e-67
AT3G27610.2 | Symbols:  | Nucleotidylyl transferase superfamily ...   246   5e-66
AT3G27610.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   246   5e-66

>AT2G01220.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr2:123301-126213 FORWARD LENGTH=387
          Length = 387

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 145/173 (83%)

Query: 8   ALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKLSK 67
           ALGWL+S+PGASNT+LE++VPYSR+SM+QL G++PSQ CSQ  A++MAL+AYNRALKLSK
Sbjct: 31  ALGWLMSVPGASNTLLESVVPYSRVSMVQLLGRVPSQHCSQALAKEMALLAYNRALKLSK 90

Query: 68  PGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHL 127
           PG PV+GVGFTGSL +SRPK+G+HRF++S R +DR+  S VTL K LRSREEEDK+SS  
Sbjct: 91  PGYPVLGVGFTGSLVTSRPKRGDHRFFLSMRASDRILESSVTLTKNLRSREEEDKVSSCA 150

Query: 128 LLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
           L++A+A AC+V  T   GL+ES+V  ESE  F E+QELEQLING +C KIYPF
Sbjct: 151 LIQAMAKACQVSGTLDSGLTESEVPYESETHFTEEQELEQLINGHLCCKIYPF 203


>AT2G01220.2 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr2:123301-126213 FORWARD LENGTH=388
          Length = 388

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 145/173 (83%)

Query: 8   ALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKLSK 67
           ALGWL+S+PGASNT+LE++VPYSR+SM+QL G++PSQ CSQ  A++MAL+AYNRALKLSK
Sbjct: 31  ALGWLMSVPGASNTLLESVVPYSRVSMVQLLGRVPSQHCSQALAKEMALLAYNRALKLSK 90

Query: 68  PGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISSHL 127
           PG PV+GVGFTGSL +SRPK+G+HRF++S R +DR+  S VTL K LRSREEEDK+SS  
Sbjct: 91  PGYPVLGVGFTGSLVTSRPKRGDHRFFLSMRASDRILESSVTLTKNLRSREEEDKVSSCA 150

Query: 128 LLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
           L++A+A AC+V  T   GL+ES+V  ESE  F E+QELEQLING +C KIYPF
Sbjct: 151 LIQAMAKACQVSGTLDSGLTESEVPYESETHFTEEQELEQLINGHLCCKIYPF 203


>AT3G27610.2 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr3:10225729-10228152 REVERSE LENGTH=390
          Length = 390

 Score =  246 bits (629), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 109/175 (62%), Positives = 149/175 (85%)

Query: 6   TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
           +++LGWL+S+PGASNT+LE +VPYS +SM+QL G++P+Q CSQ  A +MAL+AYNRALKL
Sbjct: 29  SQSLGWLMSVPGASNTLLEAVVPYSMISMVQLLGRVPNQHCSQSMANEMALLAYNRALKL 88

Query: 66  SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
           SKPG  V+GVGFTG+LA+SRPK+G+HRF++S R ++R+W + VTL KG RSREEEDK++S
Sbjct: 89  SKPGCAVLGVGFTGTLATSRPKRGDHRFFLSIRASNRIWETSVTLTKGKRSREEEDKVAS 148

Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
            +L++A+A AC+V  T   GL++S+V +ES  QF+E++ELEQLI+GQIC KIYPF
Sbjct: 149 SVLIQAMAKACQVSETLDSGLTDSEVLNESVIQFSEEEELEQLIDGQICSKIYPF 203


>AT3G27610.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr3:10225729-10228152 REVERSE LENGTH=389
          Length = 389

 Score =  246 bits (629), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 109/175 (62%), Positives = 149/175 (85%)

Query: 6   TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
           +++LGWL+S+PGASNT+LE +VPYS +SM+QL G++P+Q CSQ  A +MAL+AYNRALKL
Sbjct: 29  SQSLGWLMSVPGASNTLLEAVVPYSMISMVQLLGRVPNQHCSQSMANEMALLAYNRALKL 88

Query: 66  SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
           SKPG  V+GVGFTG+LA+SRPK+G+HRF++S R ++R+W + VTL KG RSREEEDK++S
Sbjct: 89  SKPGCAVLGVGFTGTLATSRPKRGDHRFFLSIRASNRIWETSVTLTKGKRSREEEDKVAS 148

Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPF 180
            +L++A+A AC+V  T   GL++S+V +ES  QF+E++ELEQLI+GQIC KIYPF
Sbjct: 149 SVLIQAMAKACQVSETLDSGLTDSEVLNESVIQFSEEEELEQLIDGQICSKIYPF 203