Miyakogusa Predicted Gene

Lj0g3v0268179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268179.1 Non Chatacterized Hit- tr|I1JCQ0|I1JCQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13721
PE,86.75,0,NAD_binding_8,NULL; no description,NULL; PHYTOENE
DEHYDROGENASE,NULL; FAD/NAD(P)-binding domain,NULL,CUFF.17704.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   374   e-104

>AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr5:20107411-20110602 REVERSE LENGTH=556
          Length = 556

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/233 (76%), Positives = 204/233 (87%), Gaps = 4/233 (1%)

Query: 1   MWRRTFTSATALKDKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEEL 60
           MWRR+F++   L  KKWDA++IGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEE+
Sbjct: 1   MWRRSFST---LPKKKWDAVVIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEEI 57

Query: 61  VPGFKFSRCSYLQSLLRPSVMNELELGSKHGLKLLRSNPLSFTPCLDGRYLLLGTDKNLN 120
           VPGFKFSRCSYLQ LLRP ++ ELELG +HGLKLL+ +P SFTPCLDGRYLLLG D++LN
Sbjct: 58  VPGFKFSRCSYLQGLLRPCIIRELELG-RHGLKLLKRSPSSFTPCLDGRYLLLGPDQDLN 116

Query: 121 HSEISKFSQKDAEAYPRYESKLESFCKFMDLVLDSPPPESLQHKSSLNEQLKNKIKNSVF 180
           HSEISKFS+ DA+AYPRYE +LE FC FMD +LDS PPESLQ  SS N++L NK+  S F
Sbjct: 117 HSEISKFSKHDADAYPRYEKQLERFCGFMDPLLDSTPPESLQSASSFNDKLSNKMYKSAF 176

Query: 181 WAKCLRQASSLGQKDMVDFLDLLLSPVSKVLNNWFEADVLKATLASDAVIGST 233
           WA+CLRQA SLG KDMV F+DLLL+P SKVLNNWFE+DVLKA+LA+DAVIGST
Sbjct: 177 WARCLRQAVSLGHKDMVAFMDLLLAPASKVLNNWFESDVLKASLATDAVIGST 229