Miyakogusa Predicted Gene
- Lj0g3v0267639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0267639.1 Non Chatacterized Hit- tr|A5AHX3|A5AHX3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.19,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; no description,Tetratricopeptide-like,gene.g20769.t1.1
(369 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 2e-79
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 287 7e-78
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 4e-77
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 4e-76
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 6e-76
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 280 1e-75
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 4e-75
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 1e-73
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 4e-71
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 6e-71
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 8e-70
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 9e-69
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 3e-67
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 8e-66
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 245 3e-65
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 1e-64
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 2e-63
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 8e-62
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 3e-61
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 3e-61
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 2e-60
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 9e-59
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 222 4e-58
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 5e-58
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 8e-57
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 3e-56
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 7e-54
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 3e-53
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 5e-53
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 195 3e-50
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 6e-50
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 9e-50
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 2e-48
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 189 3e-48
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 8e-48
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 8e-48
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 186 2e-47
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 6e-47
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 6e-47
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 8e-47
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 9e-46
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 177 1e-44
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 175 5e-44
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 6e-44
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 171 1e-42
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 2e-42
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 5e-42
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 168 5e-42
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 168 5e-42
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 6e-42
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 2e-41
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 166 3e-41
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 152 3e-37
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 152 4e-37
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 148 6e-36
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 144 9e-35
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 6e-34
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 141 9e-34
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 9e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 9e-32
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 9e-32
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 133 2e-31
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 8e-31
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 9e-31
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 123 2e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 8e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 119 4e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 117 9e-27
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 115 6e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 9e-26
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 6e-25
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 110 1e-24
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 108 6e-24
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 9e-24
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 107 1e-23
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 2e-23
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 106 3e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 104 9e-23
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 102 3e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 101 8e-22
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 101 9e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 100 2e-21
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 99 4e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 99 7e-21
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 7e-21
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 9e-21
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 97 2e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 97 2e-20
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 96 4e-20
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 96 5e-20
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 1e-19
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 94 2e-19
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 91 1e-18
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 90 2e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 87 1e-17
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 87 1e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 7e-17
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 85 9e-17
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 84 2e-16
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 83 2e-16
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 82 4e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 81 1e-15
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 80 3e-15
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 79 4e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 79 5e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 79 6e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 78 8e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 78 8e-15
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 9e-15
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 76 4e-14
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 75 5e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 74 1e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 1e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 72 5e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 72 6e-13
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 72 7e-13
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 71 1e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 2e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 70 3e-12
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 4e-11
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 4e-11
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 4e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 65 7e-11
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 59 5e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 58 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 54 1e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 236/369 (63%), Gaps = 3/369 (0%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL LL++ ++ DVV+YTTIID+LC K V+DA +L++EM K I PN VTY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI C G+ A LL++MI ++++ V TF+ L+DA KEG + EA+ ++ M+K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +YSSL++G+C+ +++AK +F LM+ + P+V +Y +I G CK K V+E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ YN+LI GL + G A K+ +M G PPD+ITY+ LLD
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK ++KA+ + + +Q ++PD++TY I+I+G+CK G+++D ++F + +KG
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V YT MI+G+C++GL +EA AL +M+ G +P++ TY +IRA G+ +L+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 359 REMVARGLL 367
+EM + G +
Sbjct: 594 KEMRSCGFV 602
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 194/358 (54%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++ + D+ Y +I+ C+ + A + +M+ P+ VT +SL+ G+C
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ +AV L+++M + TFN L+ L EA + M+ +G +P+ +Y
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++G C +++ A + M K + DV YT II+ LC K V++A L EM +
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ I + + YNSLI LC GR SDA +L+++M R P+V+T++ L+D K + +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L E+ + I PD+FTY+ LI+G C RL +A+ +F+ ++ K V Y +I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G+CK +E + L +M G + + VTY +I+ LF+ G+ D +K+ ++MV+ G+
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 186/338 (55%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD+V +++++ C K +S+A L +M PN VT+ +LI+G + + +AV
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ + ++ T+ +V+ LCK G++ A ++ M K ++ + V Y++++D C
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
K VN A ++F M +G+ P+V +Y +I LC +A +LL +M KI + +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+++LID K G++ +A KL +EM R PD+ TY+ L++ C +D+A + + +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ P+V TY LI G CK R+++ E+F+++ +G Y +I G + G C
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
D A + KM S G PD +TY I++ L + G+ +K
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 188/369 (50%), Gaps = 35/369 (9%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+ DA DL+ EMV R P+ V + L+ + + + L M R+ +++++NI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV-------------- 141
L++ C+ + A V MMK G +P+ V+ SSL++GYC K +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 142 ------------------NKAKD---IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
NKA + + + MV RG PD+ +Y ++NGLCK +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
LL +M KI AD + Y ++ID LC ++DA L EM ++G P+V+TYN L+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C A L+ ++ ++ I P+V T++ LID K G+L +A++++ +++ + + +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y+ +ING+C DEA + M S P+ VTY +I+ + ++G +L RE
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 361 MVARGLLYN 369
M RGL+ N
Sbjct: 421 MSQRGLVGN 429
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 170/310 (54%), Gaps = 3/310 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S A LL + + P+VV ++ +ID+ K+ + +A LY EM+ + I P+ TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI GFC+ +L +A + MI K V T+N L+ CK V+E +F M +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ NTV+Y++L+ G + + A+ IF MV GV PD+ +Y+I+++GLCK +++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + + + K+ D YN +I+G+CK G++ D W L + +G P+VI Y ++
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C+ ++A AL +E+++ G P+ TY LI + G + E+ +++ G+
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 299 TVQAYTVMIN 308
+++IN
Sbjct: 604 DASTISMVIN 613
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 150/276 (54%), Gaps = 2/276 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+++R + PD+ Y+++I+ C + +A ++ M++K PN VTY +LI GFC
Sbjct: 350 EMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++ + L EM + + T+N L+ L + G+ A+ +F M+ GV P+ ++Y
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S L+DG C ++ KA +F + K + PD+ +Y I+I G+CK V++ W L +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + + I Y ++I G C+ G +A L EM GT P+ TYN L+ + +
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
+ LIKE++ G D T +++I+ L GRL+ +
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 128/240 (53%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E EL+ + P+VV Y T+I CK K V + +L+ EM + + N VTY +
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G G A + +M+ + ++ T++IL+D LCK G +++A VF + K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
++P+ +Y+ +++G C +V D+F + +GV P+V YT +I+G C+ + +EA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
L EM + + ++ YN+LI + G + + +L+ EM G D T + ++++L
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 228/363 (62%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T+ A+ELLR+ + +K D V Y+ IID LCK + +A++L++EM K I N +TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI GFC G+ LL +MI ++++ V TF++L+D+ KEG ++EA+ + M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P+T++Y+SL+DG+C ++KA + +LMV +G P+++++ I+ING CK +D+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L +M ++ADT+ YN+LI G C+LG+++ A +L EM R PP+++TY LLD
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + +KA+ + ++I+ ++ D+ Y I+I G+C ++ DA ++F + +KG
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V+ Y +MI G CK+G EA L KME G PD TY I+IRA G+ K KL+
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 359 REM 361
E+
Sbjct: 602 EEL 604
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 189/341 (55%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
+ +I+ C+ + + A+ +++ PN +T+++LI G C+ G++ +A+ L++ M+
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
++ T N LV+ LC G EA + M++ G +PN V+Y +++ C +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A ++ M +R + D Y+III+GLCK +D A+ L +EM + I + I YN LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G C GR D KL+ +M R P+V+T++ L+D K + +A L KE+ +GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
D TYT LIDG CK L A ++ ++ KG + ++ + ++INGYCK D+ L L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
KM G + D VTY +I+ E G+ + ++L +EMV+R
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 195/345 (56%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P+ + ++T+I+ LC + VS+A +L MV P+ +T +L+ G C+ G+ +A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L+++M+ T+ +++ +CK G A + M ++ +K + V YS ++DG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ A ++FN M +G++ ++ +Y I+I G C D+ KLL +M KI + +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
++ LID K G++ +A +L EM HRG PD ITY L+D CK +++DKA ++ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G P++ T+ ILI+G CK R+ D E+F+ + ++G Y +I G+C+ G
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ A L +M S P+ VTY+I++ L + GE++K ++ ++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 201/368 (54%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S ALEL+ R + KPD++ T+++ LC ++A L +MV PNAVTY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
++ C GQ A+ LL +M + + ++ ++I++D LCK G++ A N+F M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ N ++Y+ L+ G+C + + M+KR ++P+V +++++I+ K + E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +L EM I DTI Y SLIDG CK + A ++V+ M +G P++ T+N L++
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
CK++ +D + L +++ +G+ D TY LI G C++G+L A+E+FQ+++ +
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y ++++G C G ++AL + K+E S D Y III + + D L
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 359 REMVARGL 366
+ +G+
Sbjct: 532 CSLPLKGV 539
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 190/350 (54%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V+ ++ + ++ K K L +M K I N T + +I FC +L A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ ++I + TF+ L++ LC EG V EA + M++ G KP+ ++ ++L++G CL
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +A + + MV+ G P+ +Y ++N +CK A +LL +M I D +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+ +IDGLCK G + +A+ L NEM +G ++ITYN L+ C + D L++++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ I P+V T+++LID K G+L++A+E+ ++++ +G YT +I+G+CKE D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+A ++ M S G P+ T+ I+I + D G +L R+M RG++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 178/310 (57%), Gaps = 3/310 (0%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G +LLR ++ + P+VV ++ +IDS K+ + +A +L+ EM+ + I P+ +TY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
TSLI GFC L +A +++ M+ K D + TFNIL++ CK + + +F M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+GV +TV+Y++L+ G+C + ++N AK++F MV R V P++ +Y I+++GLC ++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A ++ +++ K+ D YN +I G+C ++ DAW L + +G P V TYN ++
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK + +A L +++++ G PD +TY ILI G + ++ +++ G++V
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Query: 299 TVQAYTVMIN 308
++I+
Sbjct: 612 DASTIKMVID 621
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 178/328 (54%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
DA DL+ +M+ R P + ++ L Q + L +M LK + ++T +I++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
+ C+ + A + ++K G +PNT+++S+L++G CL V++A ++ + MV+ G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
PD+ + ++NGLC EA L+D+M + + Y +++ +CK G+ + A +L
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
+ +M R D + Y+ ++D LCK ++D A L E++ +GI ++ TY ILI G C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
GR D ++ +D++ + N V ++V+I+ + KEG EA L +M G PD +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARG 365
Y +I ++ DK +++ MV++G
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P++ + +I+ CK + D +L+ +M + + + VTY +LI GFC +G+L A L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM+ +++ + T+ IL+D LC G ++A +F + K ++ + Y+ ++ G C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+V+ A D+F + +GV P V++Y I+I GLCK + EA L +M + D
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
YN LI G + + KL+ E+ G D T ++D+L
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ + A D+F M+ P V ++ + + + K K D L +M + I + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+I+ C+ ++ A+ + ++ G P+ IT++ L++ LC V +A+ L+ + +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G KPD+ T L++GLC G+ +A + ++ G Y ++N CK G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ L+ KME DAV Y III L + G D L EM +G+ N
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 287 bits (735), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 232/368 (63%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T A LL + ++P V++Y TIID LCK K + DA +L+ EM K I PN VTY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++MI ++++ +V TF+ L+DA KEG + EA+ ++ M+K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ V+YSSL++G+C+ +++AK +F MV + PDV +Y +I G CK K V+E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++ EM ++ +T+ YN LI GL + G A ++ EM G PP+++TYN LLD
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK+ ++KA+ + + +Q ++P ++TY I+I+G+CK G+++D ++F ++ +KG
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V AY MI+G+C++G +EA AL +M+ G +P++ Y +IRA G+ + +L+
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 359 REMVARGL 366
+EM + G
Sbjct: 595 KEMRSCGF 602
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 198/370 (53%), Gaps = 3/370 (0%)
Query: 3 ETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S A+ L+ R + K PD+V Y +++ LCK A++L ++M ++ P + Y
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++I G C + A+ L EM K + V T++ L+ LC G +A + + M+++
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
+ P+ ++S+L+D + ++ +A+ +++ MVKR + P + +Y+ +ING C +DEA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
++ + M S+ D + YN+LI G CK R+ + ++ EM RG + +TYN L+
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
L ++ + D A + KE+ G+ P++ TY L+DGLCK G+L+ A +F+ + T
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ Y +MI G CK G ++ L + G PD V Y +I KG ++ + L +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 360 EMVARGLLYN 369
EM G L N
Sbjct: 561 EMKEDGTLPN 570
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 193/352 (54%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P ++ ++ ++ ++ K L +M IP N TY+ LI FC QL A+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + T + L++ C + EA + M G +PNTV++++L+ G L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + + MV +G PD+ +Y +++NGLCK D A+ LL++M K+ +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++IDGLCK + DA L EM +G P+V+TY+ L+ LC A L+ ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I PDVFT++ LID K G+L +A++++ +++ + + ++ Y+ +ING+C D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA + M S PD VTY +I+ + ++G ++ REM RGL+ N
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 191/347 (55%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y+ +I+ C+ + A + +M+ PN VT +SL+ G+C ++ +AV L+++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ TFN L+ L EA + M+ +G +P+ V+Y +++G C + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
A ++ N M + + P V Y II+GLCK K +D+A L EM ++ I + + Y+SLI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
LC GR SDA +L+++M R PDV T++ L+D K + +A L E+ + I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P + TY+ LI+G C RL +A+++F+ ++ K V Y +I G+CK +E + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+M G + + VTY I+I+ LF+ G+ D +++ +EMV+ G+ N
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 188/338 (55%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P++V +++++ C K +S+A L +M PN VT+ +LI+G + + +A+
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ K ++ T+ ++V+ LCK G+ A N+ M + ++P + Y++++DG C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
K ++ A ++F M +G+ P+V +Y+ +I+ LC +A +LL +M KI D
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+++LID K G++ +A KL +EM R P ++TY+ L++ C +D+A + + +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ PDV TY LI G CK R+++ E+F+++ +G Y ++I G + G C
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
D A + +M S G P+ +TY ++ L + G+ +K
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 152/284 (53%), Gaps = 5/284 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+++R + P +V Y+++I+ C + +A ++ MV+K P+ VTY +LI GFC
Sbjct: 351 EMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++ + + EM + + T+NIL+ L + G+ A+ +F M+ GV PN ++Y
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+DG C ++ KA +F + + + P + +Y I+I G+CK V++ W L +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + D + YN++I G C+ G +A L EM GT P+ YN L+ + + +
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ LIKE++ G D T L+ + GRL + F D+L
Sbjct: 590 SAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDML 629
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 154/297 (51%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
+L AV L EM+ R + F+ L+ A+ K ++ M G+ N +YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
L++ +C ++ A + M+K G P++ + + ++NG C K + EA L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+T+ +N+LI GL + S+A L++ M +G PD++TY +++ LCK + D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L+ +++ ++P V Y +IDGLCK + DA +F+++ KG V Y+ +I+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
C G +A L+S M PD T+ +I A ++G+ + EKL EMV R +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 119/238 (50%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E E + + PDVV Y T+I CK K V + +++ EM + + N VTY LI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G G A + EM+ + + T+N L+D LCK G +++A VF + + ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P +Y+ +++G C +V D+F + +GV PDV +Y +I+G C+ +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
EM + + ++ CYN+LI + G + +L+ EM G D T + ++L
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%)
Query: 103 EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
E + +A +F M+K P+ + +S L+ + + + + M G+ + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y+I+IN C+ + A +L +M + + +SL++G C RIS+A LV++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
G P+ +T+N L+ L + +A+ALI + +G +PD+ TY ++++GLCK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A + + V Y +I+G CK D+AL L +ME+ G P+ VTY +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 343 RALFEKGENDKGEKLLREMVAR 364
L G +LL +M+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIER 320
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 114/230 (49%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+++ A +F MVK P + ++ +++ + K+ D L ++M + I + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
LI+ C+ ++ A ++ +M G P+++T + LL+ C S + +A+AL+ ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G +P+ T+ LI GL + +A + ++ KG + Y V++NG CK G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L++KME P + Y II L + D L +EM +G+ N
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 228/363 (62%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T+ A+ELLR+ + +K D V Y+ IID LCKD + +A++L++EM K + + Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+LI GFC G+ LL +MI +++ +V F+ L+D KEG ++EA+ + M++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P+TV+Y+SL+DG+C +++KA + +LMV +G P+++++ I+ING CK ++D+
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L +M ++ADT+ YN+LI G C+LG++ A +L EM R PD+++Y LLD
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + +KA+ + ++I+ ++ D+ Y I+I G+C ++ DA ++F + +KG
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V+ Y +MI G CK+G EA L KME G P+ TY I+IRA +G+ K KL+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 359 REM 361
E+
Sbjct: 586 EEI 588
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 188/341 (55%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
+ +I+ C+ + +S A+ +++ P+ VT+++LI G C+ G++ +A+ L++ M+
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ T N LV+ LC G V +A + M++ G +PN V+Y ++ C +
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A ++ M +R + D Y+III+GLCK +D A+ L +EM + AD I Y +LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G C GR D KL+ +M R PDV+ ++ L+D K + +A L KE+ +GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
D TYT LIDG CK +L A + ++ KG ++ + ++INGYCK L D+ L L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
KM G + D VTY +I+ E G+ + ++L +EMV+R
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 202/368 (54%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S ALEL+ R + KP ++ +++ LC + VSDA L MV PN VTY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
++ C GQ A+ LL +M +++ ++ ++I++D LCK+G++ A N+F M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G K + + Y++L+ G+C + + M+KR ++PDV +++ +I+ K + E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +L EM I DT+ Y SLIDG CK ++ A +++ M +G P++ T+N L++
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
CK++ +D + L +++ +G+ D TY LI G C++G+L+ A+E+FQ+++ +
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ +Y ++++G C G ++AL + K+E S D Y III + + D L
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 359 REMVARGL 366
+ +G+
Sbjct: 516 CSLPLKGV 523
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 186/345 (53%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD V ++T+I+ LC + VS+A +L MV P +T +L+ G C+ G++ AV
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ T+ ++ +CK G A + M ++ +K + V YS ++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ A ++FN M +G D+ YT +I G C D+ KLL +M KI D +
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+++LID K G++ +A +L EM RG PD +TY L+D CK + +DKA ++ +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G P++ T+ ILI+G CK + D E+F+ + ++G Y +I G+C+ G
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ A L +M S PD V+Y+I++ L + GE +K ++ ++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 177/310 (57%), Gaps = 3/310 (0%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G +LLR ++ + PDVV ++ +ID K+ + +A +L+ EM+ + I P+ VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
TSLI GFC QL +A +L+ M+ K + TFNIL++ CK + + +F M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+GV +TV+Y++L+ G+C + ++ AK++F MV R V PD+ SY I+++GLC ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A ++ +++ K+ D YN +I G+C ++ DAW L + +G PDV TYN ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK ++ +A L +++++ G P+ TY ILI G + ++ ++I G++V
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 299 TVQAYTVMIN 308
++++
Sbjct: 596 DASTVKMVVD 605
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 190/357 (53%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ R +P ++ ++ + + + K DL +M K I N T + +I C +
Sbjct: 63 MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRK 122
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L A + ++I + + TF+ L++ LC EG V EA + M++ G KP ++ ++
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++G CL +V+ A + + MV+ G P+ +Y ++ +CK A +LL +M K
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I D + Y+ +IDGLCK G + +A+ L NEM +G D+I Y L+ C + D
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L++++ + I PDV ++ LID K G+L++A+E+ ++++ +G + YT +I+G+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
CKE D+A ++ M S G P+ T+ I+I + D G +L R+M RG++
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 151/284 (53%), Gaps = 5/284 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+++R + PD V YT++ID CK+ + A + MV+K PN T+ LI G+C
Sbjct: 342 EMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+ + L +M L+ + + T+N L+ C+ G ++ AK +F M+ + V+P+ VSY
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
L+DG C E KA +IF + K + D+ Y III+G+C VD+AW L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + D YN +I GLCK G +S+A L +M G P+ TYN L+ + K
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ LI+EI+ G D T +++D L GRLK + F D+L
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKS---FLDML 620
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 126/233 (54%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+L+ + P++ + +I+ CK L+ D +L+ +M + + + VTY +LI GFC
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+G+L+ A L EM+ +R+ ++ ++ IL+D LC G ++A +F + K ++ +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ G C +V+ A D+F + +GV PDV++Y I+I GLCK + EA L +M
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ + YN LI G + + KL+ E+ G D T ++D+L
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%)
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
DA L EM P +I ++ L V+ ++ D + L K+++ +GI +++T +I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+ C+ +L A I+ GY ++ +ING C EG EAL L+ +M G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
P +T ++ L G+ L+ MV G N
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 228/363 (62%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE AL LL + ++ DVV+Y+T+IDSLCK + V DA +L++EM K I P+ TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++M+ ++++ V TFN L+DA KEG + EA+ +F M++
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + PN V+Y+SL++G+C+ +++A+ IF LMV + PDV +Y +ING CK K V +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L +M ++ +T+ Y +LI G + +A + +M G P+++TYN LLD
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK+ ++KA+ + + +Q ++PD++TY I+ +G+CK G+++D ++F + +KG
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V AY MI+G+CK+GL +EA L KM+ G +PD+ TY +IRA G+ +L+
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 359 REM 361
+EM
Sbjct: 579 KEM 581
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 189/354 (53%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V ++ Y +I+ LC+ +S A + +M+ P+ VT SL+ GFC ++ +AV
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ + TF LV L + EA + M+ +G +P+ V+Y ++++G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C E + A ++ N M K + DV Y+ +I+ LCK + VD+A L EM ++ I D
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y+SLI LC GR SDA +L+++M R P+V+T+N L+D K + +A L E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + I P++ TY LI+G C RL +AQ+IF ++ K V Y +ING+CK
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ + L M G + + VTY +I F+ + D + + ++MV+ G+ N
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 192/355 (54%), Gaps = 3/355 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL +L + + P +V ++++ C +S+A L +MV P+ VT+T
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+L++G + +AV L+ M++K ++ T+ +++ LCK G A N+ M K
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ + V YS+++D C + V+ A ++F M +G+ PDV +Y+ +I+ LC +A
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M KI + + +NSLID K G++ +A KL +EM R P+++TYN L++
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +D+A + + + PDV TY LI+G CK ++ D E+F+D+ +G
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
YT +I+G+ + CD A + +M S G P+ +TY ++ L + G+ +K
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 184/352 (52%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V ++ ++ ++ K K +M + N TY +I C QL A+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + T N L++ C + EA + M++ G +P+TV++++L+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + MV +G PD+ +Y +INGLCK D A LL++M KI AD +
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+++ID LCK + DA L EM ++G PDV TY+ L+ LC A L+ ++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P+V T+ LID K G+L +A+++F +++ + + + Y +ING+C D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA + + M S +PD VTY +I + + G +L R+M RGL+ N
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 177/332 (53%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+ +A DL+ EMV R P+ V ++ L+ + + + +M + + ++T+NI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+++ LC+ + A + MMK G P+ V+ +SL++G+C +++A + + MV+ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
PD ++T +++GL + EA L++ M + D + Y ++I+GLCK G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
L+N+M DV+ Y+ ++D LCK +VD A+ L E+ ++GI+PDVFTY+ LI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C GR DA + D+L + N V + +I+ + KEG EA L +M P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
VTY +I D+ +++ MV++ L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 143/273 (52%), Gaps = 2/273 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+++R + P++V Y ++I+ C + +A +++ MV+K P+ VTY +LI GFC
Sbjct: 335 EMIQRS-IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ + L +M + + T+ L+ + + A+ VF M+ GV PN ++Y
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+DG C ++ KA +F + K + PD+ +Y I+ G+CK V++ W L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + D I YN++I G CK G +A+ L +M G PD TYN L+ + +
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
+ LIKE++ D TY ++ D L GRL
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDML-HDGRL 605
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 120/227 (52%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
++++A D+F MVK P + ++ +++ + K+K D ++M + + YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+I+ LC+ ++S A ++ +M G P ++T N LL+ C + + +A+AL+ ++ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G +PD T+T L+ GL + + +A + + +++KG + Y +ING CK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
L L++KME D V Y +I +L + D L EM +G+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 221/363 (60%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T AL LL + ++ DVV++ TIIDSLCK + V DA +L+ EM K I PN VTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++MI K+++ + TFN L+DA KEG EA+ ++ M+K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +Y+SL++G+C+ ++KAK +F MV + PDV +Y +I G CK K V++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ DT+ Y +LI GL G +A K+ +M G PPD++TY+ LLD
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + ++KA+ + +Q IK D++ YT +I+G+CK G++ D ++F + +KG
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V Y MI+G C + L EA AL+ KM+ G +P++ TY +IRA G+ +L+
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 359 REM 361
REM
Sbjct: 599 REM 601
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 198/362 (54%), Gaps = 3/362 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL LL + + +P +V +++++ C K +SDA L +MV P+ +T+T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+LI+G + + +AV L++ M+ + + T+ ++V+ LCK G+ A N+ M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ + V +++++D C + V+ A ++F M +G+ P+V +Y+ +I+ LC +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M +KI + + +N+LID K G+ +A KL ++M R PD+ TYN L++
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +DKA + + + + PDV TY LI G CK R++D E+F+++ +G
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
YT +I G +G CD A + +M S G PD +TY I++ L G+ +K ++
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 360 EM 361
M
Sbjct: 495 YM 496
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 191/358 (53%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++R + + Y +I+ C+ +S A L +M+ P+ VT +SL+ G+C
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ AV L+++M+ + TF L+ L EA + M+++G +PN V+Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+++G C + + A ++ N M + DV + II+ LCK + VD+A L EM +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ I + + Y+SLI LC GR SDA +L+++M + P+++T+N L+D K +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L ++ + I PD+FTY L++G C RL A+++F+ ++ K V Y +I
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G+CK ++ L +M G + D VTY +I+ LF G+ D +K+ ++MV+ G+
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 187/350 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V + ++ ++ K K L +M I TY LI FC Q+ A+ L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + T + L++ C + +A + M++ G +P+T+++++L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + + MV+RG P++ +Y +++NGLCK D A LL++M + KI AD +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N++ID LCK + DA L EM +G P+V+TY+ L+ LC A L+ ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P++ T+ LID K G+ +A++++ D++ + + + Y ++NG+C D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+A + M S PD VTY +I+ + + G +L REM RGL+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
++ + PD+ Y ++++ C + A ++ MV+K P+ VTY +LI GFC +++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
L EM + + + T+ L+ L +G+ A+ VF M+ GV P+ ++YS L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
DG C ++ KA ++F+ M K + D+ YT +I G+CK VD+ W L + + +
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+ + YN++I GLC + +A+ L+ +M G P+ TYN L+ + + + L
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
I+E++ D T L+ + GRL + F D+L
Sbjct: 598 IREMRSCRFVGDASTIG-LVANMLHDGRLDKS---FLDML 633
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 118/230 (51%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+++ A +F MVK P + + +++ + K+K D L ++M +I+ YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
LI+ C+ +IS A L+ +M G P ++T + LL+ C + A+AL+ ++ +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G +PD T+T LI GL + +A + ++ +G + Y V++NG CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L L++KME++ D V + II +L + D L +EM +G+ N
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 227/363 (62%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL LL++ ++P VV+Y TIID+LC K V+DA +L++EM K I PN VTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI C G+ A LL++MI ++++ V TF+ L+DA KEG + EA+ ++ M+K
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +YSSL++G+C+ +++AK +F LM+ + P+V +Y +I G CK K VDE
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ Y +LI G + +A + +M G PD++TY+ LLD
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + V+ A+ + + +Q ++PD++TY I+I+G+CK G+++D ++F + +KG
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V YT M++G+C++GL +EA AL +M+ G +PD+ TY +IRA G+ +L+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 359 REM 361
REM
Sbjct: 595 REM 597
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 193/351 (54%), Gaps = 3/351 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL +L + + +PD+V ++++ C +SDA L +MV P++ T+
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+LI+G + +AV L++ M++K ++ T+ I+V+ LCK G++ A ++ M +
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++P V Y++++D C K VN A ++F M +G+ P+V +Y +I LC +A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M KI + + +++LID K G++ +A KL +EM R PD+ TY+ L++
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 370
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +D+A + + + + P+V TY LI G CK R+ + E+F+++ +G
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
YT +I+G+ + CD A + +M S G +PD +TY I++ L G+
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 189/352 (53%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ ++ Y+ +I+ C+ +S A + ++M+ P+ VT SL+ GFC ++ AV
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+ +M+ + TFN L+ L + EA + M+ +G +P+ V+Y +++G
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C +++ A + M + + P V Y II+ LC K V++A L EM ++ I +
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNSLI LC GR SDA +L+++M R P+V+T++ L+D K + +A L E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + I PD+FTY+ LI+G C RL +A+ +F+ ++ K V Y +I G+CK
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
DE + L +M G + + VTY +I F+ E D + + ++MV+ G+L
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 190/352 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V ++ ++ ++ K L +M I N TY+ LI FC QL A+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + ++ T N L++ C + +A ++ M++ G +P++ ++++L+ G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++A + + MV +G PD+ +Y I++NGLCK +D A LL +M KI +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++ID LC ++DA L EM ++G P+V+TYN L+ LC A L+ ++
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P+V T++ LID K G+L +A++++ +++ + + + Y+ +ING+C D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA + M S P+ VTY +I+ + D+G +L REM RGL+ N
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E EL+ + P+VV Y T+I CK K V + +L+ EM + + N VTYT+LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+GF + A + +M+ + ++ T++IL+D LC G V+ A VF + + ++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ +Y+ +++G C +V D+F + +GV P+V +YT +++G C+ + +EA L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
EM E + D+ YN+LI + G + + +L+ EM
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 221/368 (60%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+TS AL+LLR+ + VK DV Y+TIIDSLC+D + A L+ EM K I + VTY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SL+ G C G+ LL +M+ + + V TFN+L+D KEG ++EA ++ M+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ PN ++Y++LMDGYC+ +++A ++ +LMV+ SPD+ ++T +I G C +K VD+
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
K+ + ++A+ + Y+ L+ G C+ G+I A +L EM G PDV+TY LLD
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + ++KA+ + +++Q + + YT +I+G+CK G+++DA +F + KG
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V YTVMI+G CK+G EA L+ KME G P+ TY +IRA G+ KL+
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 359 REMVARGL 366
EM + G
Sbjct: 567 EEMKSCGF 574
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 35/384 (9%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD + T+I L + VS+A L MV P+ VTY S++ G C G A+
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL +M + + +V T++ ++D+LC++G + A ++F M +G+K + V+Y+SL+ G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ N + MV R + P+V ++ ++++ K + EA +L EM + I + I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 197 CYNSLIDGLCKLGRIS-----------------------------------DAWKLVNEM 221
YN+L+DG C R+S D K+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
RG + +TY+ L+ C+S + A L +E+ G+ PDV TY IL+DGLC G+L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ A EIF+D+ ++ + YT +I G CK G ++A L + G P+ +TY ++
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 342 IRALFEKGENDKGEKLLREMVARG 365
I L +KG + LLR+M G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDG 538
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 191/359 (53%), Gaps = 1/359 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++R + + P +V ++ ++ + K + D ++ I N T +I FC
Sbjct: 78 EMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRC 136
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+ A +L +++ + + TFN L+ L EG V EA + M++ G +P+ V+Y
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+S+++G C + + A D+ M +R V DV +Y+ II+ LC+ +D A L EM +
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ I + + YNSL+ GLCK G+ +D L+ +M R P+VIT+N LLDV K + +
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L KE+ +GI P++ TY L+DG C RL +A + ++ + + +T +I
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
GYC D+ + + + G + +AVTY I+++ + G+ E+L +EMV+ G+L
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 183/336 (54%)
Query: 26 IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR 85
+I+ C+ AY + +++ P+ T+ +LI G + G++ +AV L++ M+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+V T+N +V+ +C+ G+ A ++ M ++ VK + +YS+++D C ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+F M +G+ V +Y ++ GLCK ++ LL +M S +I+ + I +N L+D
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K G++ +A +L EM RG P++ITYN L+D C + + +A ++ + PD+
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
T+T LI G C V R+ D ++F++I +G Y++++ G+C+ G A L +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M S G +PD +TY I++ L + G+ +K ++ ++
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 175/332 (52%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
DA L+ EM+ R P+ V ++ Q + ++ L + ++T NI++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
+ C+ A +V +MK G +P+T ++++L+ G L +V++A + + MV+ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
PDV +Y I+NG+C+ A LL +M + AD Y+++ID LC+ G I A L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
EM +G V+TYN L+ LCK+ + L+K++ + I P+V T+ +L+D K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G+L++A E++++++ +G + + Y +++GYC + EA ++ M + PD VT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ +I+ D G K+ R + RGL+ N
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 132/240 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E + L+L+ R PD+V +T++I C K V D ++ + + + NAVTY+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ GFC G+++ A L EM+ + +V T+ IL+D LC G +++A +F + K
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ V Y+++++G C +V A ++F + +GV P+V +YT++I+GLCK + EA
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
LL +M + + YN+LI + G ++ + KL+ EM G D + ++D+L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%)
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
D+A L EM + + + ++ + + + + ++ G ++ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
++ C+ A +++ ++ G +PD T+ LI GL G++ +A + ++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
V Y ++NG C+ G AL L+ KME D TY II +L G D
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 357 LLREMVARGL 366
L +EM +G+
Sbjct: 250 LFKEMETKGI 259
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 218/363 (60%), Gaps = 3/363 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A LL + ++ DVV++ TIIDSLCK + V DA +L+ EM K I PN VTY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++MI K+++ + TFN L+DA KEG EA+ + M+K
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +Y+SL++G+C+ ++KAK +F MV + PD+ +Y +I G CK K V++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ DT+ Y +LI GL G +A K+ +M G PPD++TY+ LLD
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + ++KA+ + +Q IK D++ YT +I+G+CK G++ D ++F + +KG
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V Y MI+G C + L EA AL+ KM+ G +PD+ TY +IRA G+ +L+
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Query: 359 REM 361
REM
Sbjct: 524 REM 526
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 199/362 (54%), Gaps = 3/362 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL LL + + +P +V +++++ C K +SDA L +MV P+ +T+T
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+LI+G + + +AV L++ M+ + + T+ ++V+ LCK G++ A N+ M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ + V +++++D C + V+ A ++F M +G+ P+V +Y+ +I+ LC +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M +KI + + +N+LID K G+ +A KL ++M R PD+ TYN L++
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +DKA + + + + PD+ TY LI G CK R++D E+F+++ +G
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
YT +I G +G CD A + +M S G PD +TY I++ L G+ +K ++
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 360 EM 361
M
Sbjct: 420 YM 421
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 193/358 (53%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++R + ++ Y +I+ C+ +S A L +M+ P+ VT +SL+ G+C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ AV L+++M+ + TF L+ L EA + M+++G +PN V+Y
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+++G C +++ A ++ N M + DV + II+ LCK + VD+A L EM +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ I + + Y+SLI LC GR SDA +L+++M + P+++T+N L+D K +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L ++ + I PD+FTY LI+G C RL A+++F+ ++ K + Y +I
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G+CK ++ L +M G + D VTY +I+ LF G+ D +K+ ++MV+ G+
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 187/350 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + + ++ ++ K K L +M I N TY LI FC Q+ A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + T + L++ C + +A + M++ G +P+T+++++L+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + + MV+RG P++ +Y +++NGLCK +D A+ LL++M + KI AD +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N++ID LCK + DA L EM +G P+V+TY+ L+ LC A L+ ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P++ T+ LID K G+ +A+++ D++ + + + Y +ING+C D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+A + M S PD TY +I+ + + G +L REM RGL+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++++R + PD+ Y ++I+ C + A ++ MV+K P+ TY +LI GFC
Sbjct: 280 DMIKRS-IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+++ L EM + + + T+ L+ L +G+ A+ VF M+ GV P+ ++Y
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S L+DG C ++ KA ++F+ M K + D+ YT +I G+CK VD+ W L +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + + + YN++I GLC + +A+ L+ +M G PD TYN L+ + +
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ LI+E++ D T L+ + GRL + F D+L
Sbjct: 519 SAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS---FLDML 558
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%)
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
MVK P + + +++ + K+K D L ++M I + YN LI+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
IS A L+ +M G P ++T + LL+ C + A+AL+ ++ + G +PD T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
LI GL + +A + ++ +G + Y V++NG CK G D A L++KME++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
D V + II +L + D L +EM +G+ N
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 278 bits (710), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 233/368 (63%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL LL++ ++ DVV+Y TIID LCK K + DA +L++EM K I P+ TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++MI ++++ V TF+ L+DA KEG + EA+ ++ M+K
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +YSSL++G+C+ +++AK +F LM+ + P+V +Y+ +I G CK K V+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ Y +LI G + +A + +M G P+++TYN LLD
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK+ + KA+ + + +Q ++PD++TY I+I+G+CK G+++D E+F ++ +KG +
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V AY MI+G+C++G +EA +L+ KM+ G +P++ TY +IRA G+ + +L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 359 REMVARGL 366
+EM + G
Sbjct: 597 KEMRSCGF 604
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 35/369 (9%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
V DA DL+ +MV R P+ V + L+ + + + + L +M + +++T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA----------- 144
++ C+ + A V A MMK G +P+ V+ SSL++GYC K ++ A
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 145 --KDIFNL----------------------MVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
D F MV+RG PD+ +Y ++NGLCK +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
LL +M KI AD + YN++IDGLCK + DA L EM ++G PDV TY+ L+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C A L+ ++ ++ I P+V T++ LID K G+L +A++++ +++ + + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y+ +ING+C DEA + M S P+ VTY +I+ + ++G +L RE
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 361 MVARGLLYN 369
M RGL+ N
Sbjct: 424 MSQRGLVGN 432
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 192/354 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D+ Y+ I+ C+ +S A + ++M+ P+ VT +SL+ G+C ++ AV
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ + TF L+ L EA + M+++G +P+ V+Y ++++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C +++ A + M K + DV Y II+GLCK K +D+A L EM ++ I D
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y+SLI LC GR SDA +L+++M R P+V+T++ L+D K + +A L E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + I PD+FTY+ LI+G C RL +A+ +F+ ++ K V Y+ +I G+CK
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+E + L +M G + + VTY +I F+ + D + + ++MV+ G+ N
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 200/351 (56%), Gaps = 3/351 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL +L + + +PD+V +++++ C K +SDA L +MV P+ T+T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+LI+G + + +AV L+++M+ + ++ T+ +V+ LCK G++ A ++ M K
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ + V Y++++DG C K ++ A ++F M +G+ PDV +Y+ +I+ LC +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M KI + + +++LID K G++ +A KL +EM R PD+ TY+ L++
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +D+A + + + + P+V TY+ LI G CK R+++ E+F+++ +G
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
YT +I+G+ + CD A + +M S G P+ +TY I++ L + G+
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 14/349 (4%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + + S C ++ + A Y E++ R+ + ++ AV L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREILRNRLSD--------------IIKVDDAVDL 70
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M+ R + FN L+ A+ K + ++ M G+ + +YS ++ +C
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+++ A + M+K G PD+ + + ++NG C K + +A L+D+M DT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+ +LI GL + S+A LV++M RG PD++TY +++ LCK ++D A++L+K+++
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
I+ DV Y +IDGLCK + DA +F ++ KG V Y+ +I+ C G
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+A L+S M P+ VT+ +I A ++G+ + EKL EM+ R +
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 151/284 (53%), Gaps = 5/284 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+++R + PD+ Y+++I+ C + +A ++ M++K PN VTY++LI GFC
Sbjct: 353 EMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++ + L EM + + T+ L+ + + A+ VF M+ GV PN ++Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+DG C ++ KA +F + + + PD+ +Y I+I G+CK V++ W+L +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + + I YN++I G C+ G +A L+ +M G P+ TYN L+ + + +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ LIKE++ G D T L+ + GRL + F D+L
Sbjct: 592 SAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDML 631
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 127/240 (52%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E EL+ + P+VV Y+T+I CK K V + +L+ EM + + N VTYT+
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+GF A + +M+ + + T+NIL+D LCK G + +A VF + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
++P+ +Y+ +++G C +V ++F + +GVSP+V +Y +I+G C+ +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
LL +M + + ++ YN+LI + G + +L+ EM G D T + ++L
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 223/368 (60%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T+ A+ELLR+ + +K D V Y+ IID LCKD + +A++L++EM K + +TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI GFC G+ LL +MI +++ V TF++L+D+ KEG ++EA + MM+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ PNT++Y+SL+DG+C + +A + +LM+ +G PD+ ++ I+ING CK +D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM +IA+T+ YN+L+ G C+ G++ A KL EM R PD+++Y LLD
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + ++KA+ + +I+ ++ D+ Y I+I G+C ++ DA ++F + +KG +
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+AY +MI+ C++ +A L KM G PD +TY I+IRA + +L+
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 359 REMVARGL 366
EM + G
Sbjct: 602 EEMKSSGF 609
Score = 214 bits (544), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 207/365 (56%), Gaps = 3/365 (0%)
Query: 5 SAALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
S ALEL+ R + KP ++ T+++ LC + VSDA L MV PN VTY +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ C GQ A+ LL +M + + ++ ++I++D LCK+G++ A N+F M +G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
K + ++Y++L+ G+C + + M+KR +SP+V +++++I+ K + EA +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
LL EM I +TI YNSLIDG CK R+ +A ++V+ M +G PD++T+N L++ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K++ +D + L +E+ +G+ + TY L+ G C+ G+L+ A+++FQ+++ + +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+Y ++++G C G ++AL + K+E S D Y III + + D L +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 362 VARGL 366
+G+
Sbjct: 535 PLKGV 539
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 187/338 (55%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD V++ T+++ LC + VS+A +L MV P +T +L+ G C+ G++ AV
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ T+ +++ +CK G A + M ++ +K + V YS ++DG C
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ A ++FN M +G D+ +Y +I G C D+ KLL +M KI + +
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
++ LID K G++ +A +L+ EM RG P+ ITYN L+D CK + +++AI ++ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G PD+ T+ ILI+G CK R+ D E+F+++ ++G Y ++ G+C+ G
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
+ A L +M S PD V+Y+I++ L + GE +K
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 190/341 (55%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
+ +I+ C+ + +S A+ +++ P+ V + +L+ G C+ ++ +A+ L++ M+
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ T N LV+ LC G V +A + M++ G +PN V+Y +++ C +
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A ++ M +R + D Y+III+GLCK +D A+ L +EM + AD I YN+LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G C GR D KL+ +M R P+V+T++ L+D K + +A L+KE+ +GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
+ TY LIDG CK RL++A ++ ++ KG + + + ++INGYCK D+ L L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+M G + + VTY +++ + G+ + +KL +EMV+R
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 190/352 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V+ + + ++ K K L +M +K I + T + +I FC +L A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ +++ + + FN L++ LC E V EA + M++ G KP ++ ++L++G CL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+V+ A + + MV+ G P+ +Y ++N +CK A +LL +M I D +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+ +IDGLCK G + +A+ L NEM +G D+ITYN L+ C + D L++++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ I P+V T+++LID K G+L++A ++ ++++ +G Y +I+G+CKE +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA+ ++ M S G PD +T+ I+I + D G +L REM RG++ N
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 154/302 (50%), Gaps = 36/302 (11%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++++R+ + P+VV ++ +IDS K+ + +A L EM+ + I PN +TY SLI GFC
Sbjct: 323 DMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCK-------------------------- 102
+L++A+ +++ MI K D ++ TFNIL++ CK
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 103 ---------EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
G ++ AK +F M+ + V+P+ VSY L+DG C E+ KA +IF + K
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
+ D+ Y III+G+C VD+AW L + + + D YN +I LC+ +S
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A L +M G PD +TYN L+ + A LI+E++ G DV T ++I+
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 274 GL 275
L
Sbjct: 622 ML 623
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 151/297 (50%), Gaps = 35/297 (11%)
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
+A ++F M++ P + ++ L K+ + M +G++ + + +I+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN---EMHHR 224
N C+ + + A+ + ++ DT+ +N+L++GLC R+S+A +LV+ EM H+
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 225 --------------------------------GTPPDVITYNPLLDVLCKSHNVDKAIAL 252
G P+ +TY P+L+V+CKS A+ L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+++++++ IK D Y+I+IDGLCK G L +A +F ++ IKG+ + Y +I G+C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G D+ L+ M P+ VT+ ++I + ++G+ + ++LL+EM+ RG+ N
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ + A D+F M++ P V + + + + K K + L +M S+ I +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+I+ C+ ++S A+ + ++ G PD + +N LL+ LC V +A+ L+ + +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY----------------------- 296
G KP + T L++GLC G++ DA + ++ G+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 297 ----------NVTVQA--YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
N+ + A Y+++I+G CK+G D A L ++ME G D +TY +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 345 LFEKGENDKGEKLLREMVARGLLYN 369
G D G KLLR+M+ R + N
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPN 332
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
+GL IK D+A L +M + + I +N L + K + L +M +G
Sbjct: 62 SGLVGIK-ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
+ T + +++ C+ + A + + +I G +PD + L++GLC R+ +A E+
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
++ G+ T+ ++NG C G +A+ LI +M +G P+ VTY ++ + +
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 348 KGENDKGEKLLREMVARGL 366
G+ +LLR+M R +
Sbjct: 241 SGQTALAMELLRKMEERNI 259
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 212/346 (61%), Gaps = 3/346 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ++ AL+L R+ + +K VV Y+ +IDSLCKD DA L++EM K I + VTY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI G C G+ +L EMI + + +V TF+ L+D KEG + EAK ++ M+
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P+T++Y+SL+DG+C +++A +F+LMV +G PD+ +Y+I+IN CK K VD+
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L E+ S+ +I +TI YN+L+ G C+ G+++ A +L EM RG PP V+TY LLD
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + ++KA+ + +++Q + + Y I+I G+C ++ DA +F + KG
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
V Y VMI G CK+G EA L KM+ G PD TY I+IRA
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 200/367 (54%), Gaps = 3/367 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S AL L+ R + +PD V Y +++ LCK + A DL+ +M + I + V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+ +I C G A+ L NEM +K + +V T++ L+ LC +G + + M+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ V++S+L+D + ++ +AK+++N M+ RG++PD +Y +I+G CK + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A ++ D M S+ D + Y+ LI+ CK R+ D +L E+ +G P+ ITYN L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C+S ++ A L +E+ +G+ P V TY IL+DGLC G L A EIF+ + +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y ++I+G C D+A +L + G PD VTY ++I L +KG + + L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 359 REMVARG 365
R+M G
Sbjct: 549 RKMKEDG 555
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 198/351 (56%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++ D+ T +I+ C+ K + A+ + P+ +T+++L+ GFC+ G++ +AV
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L++ M+ + ++ T + L++ LC +G V EA + M++ G +P+ V+Y +++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C A D+F M +R + V Y+I+I+ LCK D+A L +EM + I AD
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ Y+SLI GLC G+ D K++ EM R PDV+T++ L+DV K + +A L E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ +GI PD TY LIDG CK L +A ++F ++ KG + Y+++IN YCK
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
D+ + L ++ S G +P+ +TY ++ + G+ + ++L +EMV+RG+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 193/345 (55%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD + ++T+++ C + VS+A L MV + P+ VT ++LI G C+ G++ +A+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ + T+ +++ LCK GN A ++F M ++ +K + V YS ++D C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ A +FN M +G+ DV +Y+ +I GLC D+ K+L EM II D +
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+++LID K G++ +A +L NEM RG PD ITYN L+D CK + + +A + +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G +PD+ TY+ILI+ CK R+ D +F++I KG Y ++ G+C+ G
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ A L +M S G P VTY I++ L + GE +K ++ +M
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 179/300 (59%), Gaps = 1/300 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++ R ++ PDVV ++ +ID K+ + +A +LY+EM+ + I P+ +TY SLI GFC
Sbjct: 305 EMIGRNII-PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
L +A + + M+ K + ++ T++IL+++ CK V + +F + +G+ PNT++Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ G+C ++N AK++F MV RGV P V +Y I+++GLC +++A ++ ++M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
++ YN +I G+C ++ DAW L + +G PDV+TYN ++ LCK ++ +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L +++++ G PD FTY ILI L + E+ +++ + G++ ++I+
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 182/369 (49%), Gaps = 35/369 (9%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
V+DA DL+ M+ R P + + L Q +G M L ++ +++T I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+++ C++ + A +V K G +P+T+++S+L++G+CL V++A + + MV+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLD------------------------------- 184
PD+ + + +INGLC V EA L+D
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 185 ----EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+M I A + Y+ +ID LCK G DA L NEM +G DV+TY+ L+ L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C D +++E+ + I PDV T++ LID K G+L +A+E++ +++ +G
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y +I+G+CKE EA + M S G PD VTY I+I + + D G +L RE
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 361 MVARGLLYN 369
+ ++GL+ N
Sbjct: 411 ISSKGLIPN 419
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 48/306 (15%)
Query: 107 KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE----------VNKAKDIFNLMVKRGV 156
++A N F ++++G + + YSS+ + KE VN A D+F M++
Sbjct: 10 RKASN-FTQILEKGT--SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRP 66
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
P + + + + + K D M I D +I+ C+ ++ A+
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
++ G PD IT++ L++ C V +A+AL+ + + +PD+ T + LI+GLC
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 277 KVGRLKD-----------------------------------AQEIFQDILIKGYNVTVQ 301
GR+ + A ++F+ + + +V
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y+++I+ CK+G D+AL+L ++ME G D VTY +I L G+ D G K+LREM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 362 VARGLL 367
+ R ++
Sbjct: 307 IGRNII 312
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 216/369 (58%), Gaps = 7/369 (1%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
MG+T +AL LL + +KPDVV+Y+ IID LCKD SDA L+SEM+ K I PN T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +I GFC G+ A LL +MI + ++ +V TFN L+ A KEG + EA+ + M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ + P+TV+Y+S++ G+C + AK +F+LM SPDV ++ II+ C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD 449
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
E +LL E+ ++A+T YN+LI G C++ ++ A L EM G PD IT N LL
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
C++ +++A+ L + IQ I D Y I+I G+CK ++ +A ++F + I G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
VQ Y VMI+G+C + +A L KM+ +G PD TY +IR + GE DK +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 358 LREMVARGL 366
+ EM + G
Sbjct: 630 ISEMRSNGF 638
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 199/351 (56%), Gaps = 4/351 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P V+ + T+I+ LC + V +A L ++MV K + + VTY +++ G C +G + A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL++M + +V ++ ++D LCK+G+ +A+ +F+ M+++G+ PN +Y+ ++DG+
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + A+ + M++R ++PDV ++ +I+ K + EA KL DEM I DT
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNS+I G CK R DA + + M PDV+T+N ++DV C++ VD+ + L++E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
I +G+ + TY LI G C+V L AQ++FQ+++ G +++ G+C+
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+EAL L ++ S D V Y III + + + D+ L + G+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 195/357 (54%), Gaps = 22/357 (6%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYS---------------EMVAKRIPPNAVTYTSL 61
+PDVV + T++ LC + +S+A L+ +MV + P +T+ +L
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G C+ G++ +A L+N+M+ K + ++V T+ +V+ +CK G+ K A N+ + M + +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
KP+ V YS+++D C + A+ +F+ M+++G++P+V +Y +I+G C +A +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
LL +M +I D + +N+LI K G++ +A KL +EM HR PD +TYN ++ C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K + D A K + D PDV T+ +ID C+ R+ + ++ ++I +G
Sbjct: 413 KHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y +I+G+C+ + A L +M S G PD +T I+ L+ EN+K E+ L
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL---LYGFCENEKLEEAL 522
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 19/346 (5%)
Query: 39 AYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVD 98
A LY +M +RIP N ++ LI FC +L ++ ++ +V TFN L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 99 ALCKEGNVKEAKNVFAVMMKQG---------------VKPNTVSYSSLMDGYCLVKEVNK 143
LC E + EA +F M++ G + P +++++L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A + N MV +G+ DV +Y I+NG+CK+ A LL +M I D + Y+++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
LCK G SDA L +EM +G P+V TYN ++D C A L++++ ++ I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
DV T+ LI K G+L +A+++ ++L + Y MI G+CK D+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M S PD VT+ II D+G +LLRE+ RGL+ N
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 172/325 (52%), Gaps = 10/325 (3%)
Query: 1 MGETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G S A LLR + + PDV+ + +I + K+ + +A L EM+ + I P+ VT
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y S+IYGFC + A + + M +V TFN ++D C+ V E + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
++G+ NT +Y++L+ G+C V +N A+D+F M+ GV PD + I++ G C+ + ++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
EA +L + + KI DT+ YN +I G+CK ++ +AW L + G PDV TYN ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
C + A L +++D G +PD TY LI G K G + + E+ ++ G+
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF- 638
Query: 298 VTVQAYTV-MINGYCKEGLCDEALA 321
+ A+T+ M+ +G D++ +
Sbjct: 639 -SGDAFTIKMVADLITDGRLDKSFS 662
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 172/331 (51%), Gaps = 20/331 (6%)
Query: 34 KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF 93
K + DA D + MV R AV +I F + + A+ L +M ++R+ + +++F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
NIL+ C + + + F + K G +P+ V++++L+ G CL +++A +F MV+
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
G EA L D+M + I +N+LI+GLC GR+ +
Sbjct: 205 TGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A LVN+M +G DV+TY +++ +CK + A+ L+ ++++ IKPDV Y+ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
LCK G DAQ +F ++L KG V Y MI+G+C G +A L+ M P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
D +T+ +I A ++G+ + EKL EM+ R
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 15/254 (5%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L G K ++ A D F+ MV+ +I ++ D A L +M +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA- 249
I + +N LI C ++S + ++ G PDV+T+N LL LC + +A
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 250 --------------IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+AL ++ + G+ P V T+ LI+GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
++ V Y ++NG CK G AL L+SKME + PD V Y II L + G + +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 356 KLLREMVARGLLYN 369
L EM+ +G+ N
Sbjct: 317 YLFSEMLEKGIAPN 330
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 264 bits (675), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 216/369 (58%), Gaps = 7/369 (1%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
MG+T +AL LL + +KPDVV+Y+ IID LCKD SDA L+SEM+ K I PN T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +I GFC G+ A LL +MI + ++ +V TFN L+ A KEG + EA+ + M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ + P+TV+Y+S++ G+C + AK +F+LM SPDV ++ II+ C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD 449
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
E +LL E+ ++A+T YN+LI G C++ ++ A L EM G PD IT N LL
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
C++ +++A+ L + IQ I D Y I+I G+CK ++ +A ++F + I G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
VQ Y VMI+G+C + +A L KM+ +G PD TY +IR + GE DK +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 358 LREMVARGL 366
+ EM + G
Sbjct: 630 ISEMRSNGF 638
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 199/351 (56%), Gaps = 4/351 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P V+ + T+I+ LC + V +A L ++MV K + + VTY +++ G C +G + A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL++M + +V ++ ++D LCK+G+ +A+ +F+ M+++G+ PN +Y+ ++DG+
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + A+ + M++R ++PDV ++ +I+ K + EA KL DEM I DT
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNS+I G CK R DA + + M PDV+T+N ++DV C++ VD+ + L++E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
I +G+ + TY LI G C+V L AQ++FQ+++ G +++ G+C+
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+EAL L ++ S D V Y III + + + D+ L + G+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 195/357 (54%), Gaps = 22/357 (6%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYS---------------EMVAKRIPPNAVTYTSL 61
+PDVV + T++ LC + +S+A L+ +MV + P +T+ +L
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G C+ G++ +A L+N+M+ K + ++V T+ +V+ +CK G+ K A N+ + M + +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
KP+ V YS+++D C + A+ +F+ M+++G++P+V +Y +I+G C +A +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
LL +M +I D + +N+LI K G++ +A KL +EM HR PD +TYN ++ C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K + D A K + D PDV T+ +ID C+ R+ + ++ ++I +G
Sbjct: 413 KHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y +I+G+C+ + A L +M S G PD +T I+ L+ EN+K E+ L
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL---LYGFCENEKLEEAL 522
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 19/346 (5%)
Query: 39 AYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVD 98
A LY +M +RIP N ++ LI FC +L ++ ++ +V TFN L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 99 ALCKEGNVKEAKNVFAVMMKQG---------------VKPNTVSYSSLMDGYCLVKEVNK 143
LC E + EA +F M++ G + P +++++L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A + N MV +G+ DV +Y I+NG+CK+ A LL +M I D + Y+++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
LCK G SDA L +EM +G P+V TYN ++D C A L++++ ++ I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
DV T+ LI K G+L +A+++ ++L + Y MI G+CK D+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M S PD VT+ II D+G +LLRE+ RGL+ N
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 164/308 (53%), Gaps = 9/308 (2%)
Query: 1 MGETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G S A LLR + + PDV+ + +I + K+ + +A L EM+ + I P+ VT
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y S+IYGFC + A + + M +V TFN ++D C+ V E + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
++G+ NT +Y++L+ G+C V +N A+D+F M+ GV PD + I++ G C+ + ++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
EA +L + + KI DT+ YN +I G+CK ++ +AW L + G PDV TYN ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
C + A L +++D G +PD TY LI G K G + + E+ ++ G+
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF- 638
Query: 298 VTVQAYTV 305
+ A+T+
Sbjct: 639 -SGDAFTI 645
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 172/331 (51%), Gaps = 20/331 (6%)
Query: 34 KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF 93
K + DA D + MV R AV +I F + + A+ L +M ++R+ + +++F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
NIL+ C + + + F + K G +P+ V++++L+ G CL +++A +F MV+
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
G EA L D+M + I +N+LI+GLC GR+ +
Sbjct: 205 TGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A LVN+M +G DV+TY +++ +CK + A+ L+ ++++ IKPDV Y+ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
LCK G DAQ +F ++L KG V Y MI+G+C G +A L+ M P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
D +T+ +I A ++G+ + EKL EM+ R
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+ RR LV + Y T+I C+ ++ A DL+ EM++ + P+ +T L+YGFC
Sbjct: 457 EISRRGLV-ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+L++A+ L + + ++D++ +NI++ +CK V EA ++F + GV+P+ +Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++ G+C ++ A +F+ M G PD +Y +I G K +D++ +L+ EM S
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 189 EKIIADTICYNSLIDGLCKLGRISD 213
D + +C R+SD
Sbjct: 636 NGFSGDAFTIKMAEEIIC---RVSD 657
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 15/254 (5%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L G K ++ A D F+ MV+ +I ++ D A L +M +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA- 249
I + +N LI C ++S + ++ G PDV+T+N LL LC + +A
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 250 --------------IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+AL ++ + G+ P V T+ LI+GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
++ V Y ++NG CK G AL L+SKME + PD V Y II L + G + +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 356 KLLREMVARGLLYN 369
L EM+ +G+ N
Sbjct: 317 YLFSEMLEKGIAPN 330
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 199/321 (61%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KPD+V Y IIDSLCK K V+DA+D + E+ K I PN VTYT+L+ G C + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL++MI K++ V T++ L+DA K G V EAK +F M++ + P+ V+YSSL++G C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
L +++A +F+LMV +G DV SY +ING CK K V++ KL EM ++++T+
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+LI G + G + A + ++M G PD+ TYN LL LC + ++KA+ + +++
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
Q + + D+ TYT +I G+CK G++++A +F + +KG + YT M++G C +GL
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 317 DEALALISKMESSGRMPDAVT 337
E AL +KM+ G M + T
Sbjct: 487 HEVEALYTKMKQEGLMKNDCT 507
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 188/330 (56%)
Query: 32 KDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVH 91
+D ++DA DL+S+MV R P+ V + L+ + + + L +M + + +++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
TFNI+++ C V A ++ M+K G +P+ V+ SL++G+C V+ A + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
V+ G PD+ +Y II+ LCK K V++A+ E+ + I + + Y +L++GLC R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
SDA +L+++M + P+VITY+ LLD K+ V +A L +E+ I PD+ TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I+GLC R+ +A ++F ++ KG V +Y +ING+CK ++ + L +M G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ + VTY +I+ F+ G+ DK ++ +M
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 197/389 (50%), Gaps = 35/389 (8%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++ D+ + +I+ C VS A + +M+ P+ VT SL+ GFC ++ AV
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ ++ +N ++D+LCK V +A + F + ++G++PN V+Y++L++G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + A + + M+K+ ++P+V +Y+ +++ K V EA +L +EM I D
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 196 ICYNSLIDGL-----------------------------------CKLGRISDAWKLVNE 220
+ Y+SLI+GL CK R+ D KL E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M RG + +TYN L+ ++ +VDKA ++ GI PD++TY IL+ GLC G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
L+ A IF+D+ + ++ + YT +I G CK G +EA +L + G PD VTY
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 341 IIRALFEKGENDKGEKLLREMVARGLLYN 369
++ L KG + E L +M GL+ N
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 184/347 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V + ++ ++ K K L +M I + T+ +I FC Q+ A+ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + T LV+ C+ V +A ++ M++ G KP+ V+Y++++D C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K VN A D F + ++G+ P+V +YT ++NGLC +A +LL +M +KI + I
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y++L+D K G++ +A +L EM PD++TY+ L++ LC +D+A + +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G DV +Y LI+G CK R++D ++F+++ +G Y +I G+ + G D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+A S+M+ G PD TY I++ L + GE +K + +M R
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 158/300 (52%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
+L A+ L ++M+ R + FN L+ A+ K ++ M G++ + +++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ +C +V+ A I M+K G PD + ++NG C+ V +A L+D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + YN++ID LCK R++DA+ E+ +G P+V+TY L++ LC S A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L+ ++ + I P+V TY+ L+D K G++ +A+E+F++++ + + Y+ +ING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
C DEA + M S G + D V+Y +I + + G KL REM RGL+ N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PD+ Y ++ LC + + A ++ +M + + + VTYT++I G C G++++A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L + LK + ++ T+ ++ LC +G + E + ++ M ++G+ N + S DG
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS---DG- 511
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
++ + ++ M+ G +P + I +G+CK
Sbjct: 512 ----DITLSAELIKKMLSCGYAPSL--LKDIKSGVCK 542
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 217/354 (61%), Gaps = 3/354 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPDVVMYTTIIDSLCK+ V+ A L+ +M I P+ V YTSL+ G C G+ + A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL M +++ +V TFN L+DA KEG +A+ ++ M++ + PN +Y+SL++G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C+ V++A+ +F LM +G PDV +YT +ING CK K VD+A K+ EM + + +T
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
I Y +LI G ++G+ + A ++ + M RG PP++ TYN LL LC + V KA+ + ++
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 256 IQDQ---GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+Q + G+ P+++TY +L+ GLC G+L+ A +F+D+ + ++ + YT++I G CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G A+ L + S G P+ VTY +I LF +G + L R+M G+
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 183/330 (55%)
Query: 37 SDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNIL 96
++A DL++ MV R P+ + +T L+ + + + L + + + + +++T N+L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
++ C+ A + MMK G +P+ V+++SL++G+CL + +A + N MV+ G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
PDV YT II+ LCK V+ A L D+M + I D + Y SL++GLC GR DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
L+ M R PDVIT+N L+D K A L E+ I P++FTYT LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
G + +A+++F + KG V AYT +ING+CK D+A+ + +M G + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARGL 366
TY +I+ + G+ + +++ MV+RG+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 173/347 (49%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P ++ +T +++ + K K +L + + + T L+ FC Q A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + ++ TF L++ C ++EA ++ M++ G+KP+ V Y++++D C
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
VN A +F+ M G+ PDV YT ++NGLC +A LL M KI D I
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N+LID K G+ DA +L NEM P++ TY L++ C VD+A + ++
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G PDV YT LI+G CK ++ DA +IF ++ KG YT +I G+ + G +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
A + S M S G P+ TY +++ L G+ K + +M R
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 151/300 (50%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
Q +A+ L M+ R + F L++ + K N+ + GV + + +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
LM+ +C + A M+K G PD+ ++T +ING C ++EA ++++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I D + Y ++ID LCK G ++ A L ++M + G PDV+ Y L++ LC S A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+L++ + + IKPDV T+ LID K G+ DA+E++ +++ + YT +ING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+C EG DEA + ME+ G PD V Y +I + + D K+ EM +GL N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR---IPPNA 55
G+ + A E+ + V P++ Y ++ LC + V A ++ +M + + PN
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
TY L++G C G+L++A+ + +M + MD+ + T+ I++ +CK G VK A N+F
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
+ +GVKPN V+Y++++ G ++A +F M + GVS
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 212/339 (62%), Gaps = 3/339 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A LL + ++ +VV+Y+T+IDSLCK + DA +L++EM K + PN +TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C + A LL++MI ++++ V TFN L+DA KEG + EA+ ++ M+K
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+ +YSSL++G+C+ +++AK +F LM+ + P+V +Y +ING CK K +DE
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ Y +LI G + +A + +M G P+++TYN LLD
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK+ ++KA+ + + +Q ++P ++TY I+I+G+CK G+++D ++F + +KG
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
V Y MI+G+C++GL +EA AL KM G +PD+ T
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 193/386 (50%), Gaps = 35/386 (9%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD + +TT+I L S+A L MV + PN VTY ++ G C G + A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LLN+M +++ V ++ ++D+LCK + +A N+F M +GV+PN ++YSSL+ C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 137 ---------------------------------LVKE--VNKAKDIFNLMVKRGVSPDVQ 161
VKE + +A+ +++ M+KR + PD+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+Y+ +ING C +DEA + + M S+ + + YN+LI+G CK RI + +L EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
RG + +TY L+ ++ + D A + K++ G+ P++ TY L+DGLCK G+L
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ A +F+ + T+ Y +MI G CK G ++ L + G PD + Y +
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 342 IRALFEKGENDKGEKLLREMVARGLL 367
I KG ++ + L R+M G L
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPL 572
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 197/355 (55%), Gaps = 3/355 (0%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL LL + + +P +V +++++ C K +SDA L +MV P+ +T+T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+LI+G + + +AV L++ M+ + + T+ ++V+ LCK G++ A N+ M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ N V YS+++D C + + A ++F M +GV P+V +Y+ +I+ LC + +A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+LL +M KI + + +N+LID K G++ +A KL +EM R PD+ TY+ L++
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C +D+A + + + + P+V TY LI+G CK R+ + E+F+++ +G
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
YT +I+G+ + CD A + +M S G P+ +TY ++ L + G+ +K
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 194/361 (53%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++R + ++ Y +I+ C+ +S A L +M+ P+ VT +SL+ G+C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ AV L+++M+ + TF L+ L EA + M+++G +PN V+Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+++G C +++ A ++ N M + +V Y+ +I+ LCK + D+A L EM +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + + I Y+SLI LC R SDA +L+++M R P+V+T+N L+D K + +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L E+ + I PD+FTY+ LI+G C RL +A+ +F+ ++ K V Y +IN
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
G+CK DE + L +M G + + VTY +I F+ + D + + ++MV+ G+
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 369 N 369
N
Sbjct: 469 N 469
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 192/352 (54%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + + ++ ++ K K L +M I N TY LI FC Q+ A+ L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + T + L++ C + +A + M++ G +P+T+++++L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + + MV+RG P++ +Y +++NGLCK +D A+ LL++M + KI A+ +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+++ID LCK DA L EM ++G P+VITY+ L+ LC A L+ ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P+V T+ LID K G+L +A++++ +++ + + + Y+ +ING+C D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA + M S P+ VTY +I + D+G +L REM RGL+ N
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
I+ NGL +K+ D+A L M + + +N L+ + K+ + L +M
Sbjct: 56 ILRNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 225 GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
G ++ TYN L++ C+ + A+AL+ ++ G +P + T + L++G C R+ DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ ++ GY +T +I+G EA+AL+ +M G P+ VTY +++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 345 LFEKGENDKGEKLLREMVA 363
L ++G+ D LL +M A
Sbjct: 235 LCKRGDIDLAFNLLNKMEA 253
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 255 bits (651), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 203/323 (62%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KP+VV YTT+I LCK++ ++ A +L+++M PN VTY +L+ G C +G+ A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL +M+ +R++ V TF L+DA K G + EAK ++ VM++ V P+ +Y SL++G C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +++A+ +F LM + G P+ YT +I+G CK K V++ K+ EM + ++A+TI
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y LI G C +GR A ++ N+M R PPD+ TYN LLD LC + V+KA+ + + +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ + + ++ TYTI+I G+CK+G+++DA ++F + KG V YT MI+G+C+ GL
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 317 DEALALISKMESSGRMPDAVTYE 339
EA +L KM+ G +P+ Y+
Sbjct: 485 HEADSLFKKMKEDGFLPNESVYK 507
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 191/353 (54%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD+V +T++++ C + DA L+ +++ PN VTYT+LI C L AV
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L N+M V T+N LV LC+ G +A + MMK+ ++PN +++++L+D +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V ++ +AK+++N+M++ V PDV +Y +INGLC ++DEA ++ M + +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y +LI G CK R+ D K+ EM +G + ITY L+ C D A + ++
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ PD+ TY +L+DGLC G+++ A IF+ + + ++ + YT++I G CK G
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++A L + S G P+ +TY +I +G + + L ++M G L N
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 185/362 (51%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
T+A+L L Y I+ + + +DA DL++ MV R P+ + +T L+
Sbjct: 31 RTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLL 90
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ + + L +M + + + T NI++ +C A MMK G +
Sbjct: 91 SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE 150
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ V+++SL++GYC + A +F+ ++ G P+V +YT +I LCK + ++ A +L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
++M + + + YN+L+ GLC++GR DA L+ +M R P+VIT+ L+D K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ +A L + + PDVFTY LI+GLC G L +A+++F + G
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
YT +I+G+CK ++ + + +M G + + +TY ++I+ G D +++ +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 363 AR 364
+R
Sbjct: 391 SR 392
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 183/362 (50%), Gaps = 5/362 (1%)
Query: 7 ALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
AL+L R + P ++ +T ++ + K L+ +M IPP T +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
C+ Q +A L +M+ + ++ TF L++ C +++A +F ++ G KP
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-KMVDEAWKL 182
N V+Y++L+ C + +N A ++FN M G P+V +Y ++ GLC+I + D AW L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW-L 245
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
L +M +I + I + +LID K+G++ +A +L N M PDV TY L++ LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+D+A + ++ G P+ YT LI G CK R++D +IF ++ KG
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
YTV+I GYC G D A + ++M S PD TY +++ L G+ +K + M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 363 AR 364
R
Sbjct: 426 KR 427
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 149/267 (55%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ + L + ++ ++P+V+ +T +ID+ K + +A +LY+ M+ + P+ TY SL
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G C+ G L +A + M + L+ CK V++ +F M ++GV
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
NT++Y+ L+ GYCLV + A+++FN M R PD+++Y ++++GLC V++A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ + M ++ + + Y +I G+CKLG++ DA+ L + +G P+VITY ++ C
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTY 268
+ + +A +L K++++ G P+ Y
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
Q A+ L M+ R + F L+ + K ++F M G+ P + +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+M CL + +A M+K G PD+ ++T ++NG C +++A L D++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+ + Y +LI LCK ++ A +L N+M G+ P+V+TYN L+ LC+ A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L++++ + I+P+V T+T LID KVG+L +A+E++ ++ V Y +ING
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
C GL DEA + ME +G P+ V Y +I + + G K+ EM +G++ N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 202/326 (61%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+VV+Y T+I+ LCK++ +++A +++ M K I +AVTY +LI G G+ A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ +++D V F L+D KEGN+ EA+N++ M+++ V PN +Y+SL++G+C+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ AK +F+LMV +G PDV +Y +I G CK K V++ KL EM + ++ D
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN+LI G C+ G+++ A K+ N M G PD++TYN LLD LC + ++KA+ +++++Q
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ D+ TY I+I GLC+ +LK+A +F+ + KG AY MI+G C++GL
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 318 EALALISKMESSGRMPDAVTYEIIIR 343
EA L +M+ G MP Y+ +R
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETLR 507
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P +V ++++ C+ +A L M PN V Y ++I G C L A+
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ M K + + T+N L+ L G +A + M+K+ + PN + +++L+D +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF- 264
Query: 137 LVKEVN--KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
VKE N +A++++ M++R V P+V +Y +ING C + +A + D M S+ D
Sbjct: 265 -VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ YN+LI G CK R+ D KL EM ++G D TYN L+ C++ ++ A +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+ D G+ PD+ TY IL+D LC G+++ A + +D+ +V + Y ++I G C+
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
EA L + G PDA+ Y +I L KG + +KL R M G +
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 182/351 (51%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D+ +T +I C+ +S A L +M+ P+ VT SL+ GFC + Q+AV
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L++ M V +N +++ LCK ++ A VF M K+G++ + V+Y++L+ G
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
A + MVKR + P+V +T +I+ K + EA L EM ++ +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YNSLI+G C G + DA + + M +G PDV+TYN L+ CKS V+ + L E
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ QG+ D FTY LI G C+ G+L AQ++F ++ G + + Y ++++ C G
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
++AL ++ ++ S D +TY III+ L + + L R + +G+
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 174/329 (52%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
DA+ L+ EM+ R P+ V +T ++ + + + L ++M + ++++F IL+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
C+ + A + MMK G +P+ V+ SL++G+C +A + + M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+V Y +INGLCK + ++ A ++ M + I AD + YN+LI GL GR +DA +L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
+ +M R P+VI + L+D K N+ +A L KE+ + + P+VFTY LI+G C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G L DA+ +F ++ KG V Y +I G+CK ++ + L +M G + DA T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGL 366
Y +I + G+ + +K+ MV G+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 151/265 (56%), Gaps = 3/265 (1%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G + A LLR ++ + P+V+ +T +ID+ K+ + +A +LY EM+ + + PN TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI GFCI G L A + + M+ K +V T+N L+ CK V++ +F M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
QG+ + +Y++L+ GYC ++N A+ +FN MV GVSPD+ +Y I+++ LC +++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +++++ ++ D I YN +I GLC+ ++ +AW L + +G PD I Y ++
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKP 263
LC+ +A L + +++ G P
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMP 497
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 163/300 (54%), Gaps = 3/300 (1%)
Query: 7 ALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
ALE+ + ++ ++ D V Y T+I L +DA L +MV ++I PN + +T+LI
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
F G L +A L EMI + + V T+N L++ C G + +AK +F +M+ +G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ V+Y++L+ G+C K V +F M +G+ D +Y +I+G C+ ++ A K+
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
+ M + D + YN L+D LC G+I A +V ++ D+ITYN ++ LC++
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
+ +A L + + +G+KPD Y +I GLC+ G ++A ++ + + G+ + + Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 5/250 (2%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++RR +V P+V Y ++I+ C + DA ++ MV+K P+ VTY +LI GFC
Sbjct: 279 EMIRRSVV-PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+++ + L EM + + + T+N L+ C+ G + A+ VF M+ GV P+ V+Y
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+D C ++ KA + + K + D+ +Y III GLC+ + EAW L +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + D I Y ++I GLC+ G +A KL M G P Y+ L + H
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSL 513
Query: 249 AIALIKEIQD 258
+ LIK +
Sbjct: 514 SAELIKAAHE 523
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 6/202 (2%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ +L+ + PDVV Y T+I CK K V D L+ EM + + +A TY +
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+G+C G+L A + N M+ + ++ T+NIL+D LC G +++A + + K
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ + ++Y+ ++ G C ++ +A +F + ++GV PD +Y +I+GLC+ + EA
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 181 KLLDEMH------SEKIIADTI 196
KL M SE+I +T+
Sbjct: 485 KLCRRMKEDGFMPSERIYDETL 506
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ + A +F M++ P + +T ++ + K+ D L +M + I D +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
LI C+ R+S A L+ +M G P ++T LL+ C+ + +A++L+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G P+V Y +I+GLCK L +A E+F + KG Y +I+G G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L+ M P+ + + +I ++G + L +EM+ R ++ N
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 215/369 (58%), Gaps = 6/369 (1%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL LL + +K +VV++ TIIDSLCK + V A DL++EM K I PN VTY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI C G+ A LL+ M+ K+++ V TFN L+DA KEG + EA+ + M++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + P+T++Y+ L++G+C+ +++AK +F MV + P++Q+Y +ING CK K V++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ Y ++I G + G A + +M P D++TY+ LL
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC +D A+ + K +Q ++ ++F Y +I+G+CK G++ +A ++F + IK V
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
T Y MI+G C + L EA L KM+ G +P++ TY +IRA + +L+
Sbjct: 537 T---YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 359 REMVARGLL 367
+EM + G +
Sbjct: 594 KEMRSSGFV 602
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 195/354 (55%), Gaps = 3/354 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
+ S AL +L + + +PD+V +++++ C K +SDA L +MV P+ T+
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+LI+G + + +AV L+++M+ + ++ T+ +V+ LCK G++ A N+ M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+K N V +++++D C + V A D+F M +G+ P+V +Y +IN LC +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +LL M +KI + + +N+LID K G++ +A KL EM R PD ITYN L++
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C + +D+A + K + + P++ TY LI+G CK R++D E+F+++ +G
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
YT +I G+ + G CD A + +M S+ D +TY I++ L G+ D
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 192/348 (55%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D+ Y+ I+ C+ +S A + ++M+ P+ VT +SL+ G+C ++ AV
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ + TF L+ L EA + M+++G +P+ V+Y ++++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C +++ A ++ N M + +V + II+ LCK + V+ A L EM ++ I +
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNSLI+ LC GR SDA +L++ M + P+V+T+N L+D K + +A L +E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + I PD TY +LI+G C RL +A+++F+ ++ K +Q Y +ING+CK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
++ + L +M G + + VTY II+ F+ G+ D + + ++MV+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 180/334 (53%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
V DA DL+ +MV R P+ V + L+ + + + + L +M + +++T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
++ C+ + A V A MMK G +P+ V+ SSL++GYC K ++ A + + MV+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
PD ++T +I+GL EA L+D+M D + Y ++++GLCK G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
L+N+M +V+ +N ++D LCK +V+ A+ L E++ +GI+P+V TY LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C GR DA + ++L K N V + +I+ + KEG EA L +M PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+TY ++I D+ +++ + MV++ L N
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 173/349 (49%), Gaps = 14/349 (4%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + + S C ++ + A Y E++ R+ + ++ AV L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREILRNRLSD--------------IIKVDDAVDL 70
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M+ R + FN L+ A+ K + ++ M G+ + +YS ++ +C
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+++ A + M+K G PD+ + + ++NG C K + +A L+D+M DT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+ +LI GL + S+A LV++M RG PD++TY +++ LCK ++D A+ L+ +++
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
IK +V + +ID LCK ++ A ++F ++ KG V Y +IN C G
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+A L+S M P+ VT+ +I A F++G+ + EKL EM+ R +
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%)
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+V+ A D+F MVK P + + +++ + K+ + L ++M + I D Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
I+ C+ ++S A ++ +M G PD++T + LL+ C S + A+AL+ ++ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G KPD FT+T LI GL + +A + ++ +G + Y ++NG CK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L L++KME++ + V + II +L + + L EM +G+ N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 16/257 (6%)
Query: 109 AKNVFAVMMKQGV--KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTII 166
AK +F QG+ P S+ +L C + A S D + I+
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASA------------SGDYRE--IL 54
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
N L I VD+A L +M + + +N L+ + K+ + L +M G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
D+ TY+ ++ C+ + A+A++ ++ G +PD+ T + L++G C R+ DA
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+ ++ GY +T +I+G EA+AL+ +M G PD VTY ++ L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 347 EKGENDKGEKLLREMVA 363
++G+ D LL +M A
Sbjct: 235 KRGDIDLALNLLNKMEA 251
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 212/360 (58%), Gaps = 3/360 (0%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G AL L + K P+VV Y T+ID CK + + D + L M K + PN ++Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+I G C G++++ +L EM + ++ T+N L+ CKEGN +A + A M++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G+ P+ ++Y+SL+ C +N+A + + M RG+ P+ ++YT +++G + ++E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A+++L EM+ + YN+LI+G C G++ DA ++ +M +G PDV++Y+ +L
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C+S++VD+A+ + +E+ ++GIKPD TY+ LI G C+ R K+A ++++++L G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
YT +IN YC EG ++AL L ++M G +PD VTY ++I L ++ + ++LL
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 201/382 (52%), Gaps = 15/382 (3%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E S L + R+ D V Y T+I CK+ A +++EM+ + P+ +TYTS
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+ C G + +A+ L++M ++ + T+ LVD ++G + EA V M G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P+ V+Y++L++G+C+ ++ A + M ++G+SPDV SY+ +++G C+ VDEA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++ EM + I DTI Y+SLI G C+ R +A L EM G PPD TY L++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI------------- 287
C +++KA+ L E+ ++G+ PDV TY++LI+GL K R ++A+ +
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 288 --FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+ ++ N+ ++ +I G+C +G+ EA + M PD Y I+I
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 346 FEKGENDKGEKLLREMVARGLL 367
G+ K L +EMV G L
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFL 672
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 183/350 (52%), Gaps = 36/350 (10%)
Query: 18 PDVVMYTTIIDSLCKDKL-VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
P V+ Y ++D+ + K +S A +++ EM+ ++ PN
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPN---------------------- 204
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
V T+NIL+ C GN+ A +F M +G PN V+Y++L+DGYC
Sbjct: 205 -------------VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+++++ + M +G+ P++ SY ++INGLC+ + E +L EM+ D +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+LI G CK G A + EM G P VITY L+ +CK+ N+++A+ + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ +G+ P+ TYT L+DG + G + +A + +++ G++ +V Y +ING+C G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
++A+A++ M+ G PD V+Y ++ + D+ ++ REMV +G+
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 205/387 (52%), Gaps = 20/387 (5%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G + A+E L + V+ P+ YTT++D + +++AY + EM P+ VTY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI G C+ G+++ A+ +L +M K + +V +++ ++ C+ +V EA V M++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+KP+T++YSSL+ G+C + +A D++ M++ G+ PD +YT +IN C +++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +L +EM + ++ D + Y+ LI+GL K R +A +L+ ++ + + P +TY+ L++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 239 VLCKSHNVDKAIALIKEIQDQGI----------------KPDVFTYTILIDGLCKVGRLK 282
C + ++LIK +G+ KPD Y I+I G C+ G ++
Sbjct: 599 N-CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A ++++++ G+ + ++ KEG +E ++I + S + +A ++++
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLV 717
Query: 343 RALFEKGENDKGEKLLREMVARGLLYN 369
+G D +L EM G L N
Sbjct: 718 EINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Query: 127 SYSSLMD----GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM-VDEAWK 181
S SS+ D Y + ++KA I +L G P V SY +++ + K + A
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ EM ++ + YN LI G C G I A L ++M +G P+V+TYN L+D C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K +D L++ + +G++P++ +Y ++I+GLC+ GR+K+ + ++ +GY++
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y +I GYCKEG +AL + ++M G P +TY +I ++ + G ++ + L +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 362 VARGLLYN 369
RGL N
Sbjct: 372 RVRGLCPN 379
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 193/318 (60%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KP+VV+Y TIID LCK K V +A DL + M I P+ VTY SLI G C G+ A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+++ M + + +V TFN L+DA KEG V EA+ + M+++ + P+ V+YS L+ G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +++A+++F MV +G PDV +Y+I+ING CK K V+ KL EM ++ +T+
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y LI G C+ G+++ A ++ M G P++ITYN LL LC + ++KA+ ++ ++
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
Q G+ D+ TY I+I G+CK G + DA +I+ + +G + YT M+ G K+GL
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 317 DEALALISKMESSGRMPD 334
EA AL KM+ G +P+
Sbjct: 483 READALFRKMKEDGILPN 500
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 196/370 (52%), Gaps = 3/370 (0%)
Query: 3 ETSAALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S AL L + + +P +V + ++++ C+ V DA ++ +MV PN V Y
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++I G C Q+ A+ LLN M + +V T+N L+ LC G +A + + M K+
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
+ P+ ++++L+D V++A++ + M++R + PD+ +Y+++I GLC +DEA
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
++ M S+ D + Y+ LI+G CK ++ KL EM RG + +TY L+
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C++ ++ A + + + G+ P++ TY +L+ GLC G+++ A I D+ G +
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ Y ++I G CK G +A + + G MPD TY ++ L++KG + + L R
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Query: 360 EMVARGLLYN 369
+M G+L N
Sbjct: 491 KMKEDGILPN 500
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 182/334 (54%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+ D+ DL+ MV R P+ ++ L+ + + + L +M + + + T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
L++ C+ + A + M+K G +P+ V++ SL++G+C V A +F+ MV G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
P+V Y II+GLCK K VD A LL+ M + I D + YNSLI GLC GR SDA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
++V+ M R PDV T+N L+D K V +A +E+ + + PD+ TY++LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C RL +A+E+F ++ KG V Y+++INGYCK + + L +M G + +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
VTY I+I+ G+ + E++ R MV G+ N
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 186/349 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + ++ ++ ++ K K L+ +M IP N T L+ FC QL A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +MI + + TF L++ C+ V +A +F M+ G KPN V Y++++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K+V+ A D+ N M K G+ PDV +Y +I+GLC +A +++ M +I D
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N+LID K GR+S+A + EM R PD++TY+ L+ LC +D+A + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G PDV TY+ILI+G CK +++ ++F ++ +G YT++I GYC+ G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A + +M G P+ +TY +++ L + G+ +K +L +M G+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 160/322 (49%)
Query: 48 AKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVK 107
++R N Y ++ +L ++ L M+ R + F+ L+ A+ K
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
++ M G+ N + + L++ +C +++ A M+K G P + ++ ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
NG C+ V +A + D+M + + YN++IDGLCK ++ +A L+N M G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
PDV+TYN L+ LC S A ++ + + I PDVFT+ LID K GR+ +A+E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+++++ + + + Y+++I G C DEA + M S G PD VTY I+I +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 348 KGENDKGEKLLREMVARGLLYN 369
+ + G KL EM RG++ N
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRN 360
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 3/317 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDVV+Y TIID CK LV+DA +L+ M + +AVTY SL+ G C G+ A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L+ +M+++ + V TF ++D KEG EA ++ M ++ V P+ +Y+SL++G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ V++AK + +LMV +G PDV +Y +ING CK K VDE KL EM ++ DTI
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN++I G + GR A ++ + M R P++ TY+ LL LC + V+KA+ L + +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
Q I+ D+ TY I+I G+CK+G ++DA ++F+ + KG V +YT MI+G+C++
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 317 DEALALISKMESSGRMP 333
D++ L KM+ G +P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 182/324 (56%)
Query: 41 DLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDAL 100
DL+ +M+ R P+ V ++ ++ + L + M + + +++++NI+++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 101 CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
C+ A +V MMK G +P+ V+ SSL++G+C V A D+ + M + G PDV
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
Y II+G CKI +V++A +L D M + + AD + YNSL+ GLC GR SDA +L+ +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M R P+VIT+ ++DV K +A+ L +E+ + + PDVFTY LI+GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
+ +A+++ ++ KG V Y +ING+CK DE L +M G + D +TY
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 341 IIRALFEKGENDKGEKLLREMVAR 364
II+ F+ G D +++ M +R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 189/351 (53%), Gaps = 3/351 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDVV +++I+ C+ V DA DL S+M P+ V Y ++I G C +G + AV
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L + M + + T+N LV LC G +A + M+ + + PN +++++++D +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ ++A ++ M +R V PDV +Y +INGLC VDEA ++LD M ++ + D +
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+LI+G CK R+ + KL EM RG D ITYN ++ ++ D A + +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+P++ TY+IL+ GLC R++ A +F+++ + + Y ++I+G CK G
Sbjct: 376 DS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++A L + G PD V+Y +I K + DK + L R+M GLL
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 3/348 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ Y +I+ LC+ A + +M+ P+ VT +SLI GFC ++ A+ L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++M +V +N ++D CK G V +A +F M + GV+ + V+Y+SL+ G C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ A + MV R + P+V ++T +I+ K EA KL +EM + D Y
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
NSLI+GLC GR+ +A ++++ M +G PDV+TYN L++ CKS VD+ L +E+
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
+G+ D TY +I G + GR AQEIF + ++ Y++++ G C ++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
AL L M+ S D TY I+I + + G + L R + +GL
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 157/298 (52%), Gaps = 35/298 (11%)
Query: 1 MGETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G + A+EL + R V+ D V Y +++ LC SDA L +MV + I PN +T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+T++I F G+ +A+ L EM + +D +V T+N L++ LC G V EAK + +M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV--------------------- 156
+G P+ V+Y++L++G+C K V++ +F M +RG+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 157 -----------SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
P++++Y+I++ GLC V++A L + M +I D YN +I G+
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
CK+G + DAW L + +G PDV++Y ++ C+ DK+ L +++Q+ G+ P
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 161/320 (50%), Gaps = 5/320 (1%)
Query: 53 PNAVTYTSLIYGFCIVGQ-----LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVK 107
P V + S +G + L++ + L +MI R + F+ ++ + K N
Sbjct: 27 PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD 86
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
++F M G+ + SY+ +++ C A + M+K G PDV + + +I
Sbjct: 87 LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
NG C+ V +A L+ +M D + YN++IDG CK+G ++DA +L + M G
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
D +TYN L+ LC S A L++++ + I P+V T+T +ID K G+ +A ++
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
++++ + + V Y +ING C G DEA ++ M + G +PD VTY +I +
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 348 KGENDKGEKLLREMVARGLL 367
D+G KL REM RGL+
Sbjct: 327 SKRVDEGTKLFREMAQRGLV 346
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%)
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
L + M G D+ +YN +++ LC+ A++++ ++ G +PDV T + LI+G C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
+ R+ DA ++ + G+ V Y +I+G CK GL ++A+ L +ME G DAV
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
TY ++ L G +L+R+MV R ++ N
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 2/370 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYT 59
+G AA +L R + KP++V++ T+I + DA + S+MV I P+ TY
Sbjct: 335 IGRVDAAKDLFYR-IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
SLIYG+ G + A+ +L++M K V+++ ILVD CK G + EA NV M
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G+KPNTV ++ L+ +C + +A +IF M ++G PDV ++ +I+GLC++ + A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
LL +M SE ++A+T+ YN+LI+ + G I +A KLVNEM +G+P D ITYN L+
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
LC++ VDKA +L +++ G P + ILI+GLC+ G +++A E ++++++G
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ + +ING C+ G ++ L + K+++ G PD VT+ ++ L + G LL
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 360 EMVARGLLYN 369
E + G + N
Sbjct: 694 EGIEDGFVPN 703
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 193/389 (49%), Gaps = 33/389 (8%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L R+ + P + + ++ + C + A L +M PN+V Y +LI+
Sbjct: 207 DMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ +A+ LL EM L + TFN ++ LCK + EA + M+ +G P+ ++Y
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 129 SSLMDGYCLVKEVNKAKDIF--------------------------------NLMVKRGV 156
LM+G C + V+ AKD+F +++ G+
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
PDV +Y +I G K +V A ++L +M ++ + Y L+DG CKLG+I +A+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
++NEM G P+ + +N L+ CK H + +A+ + +E+ +G KPDV+T+ LI GLC
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
+V +K A + +D++ +G Y +IN + + G EA L+++M G D +
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARG 365
TY +I+ L GE DK L +M+ G
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 175/309 (56%), Gaps = 3/309 (0%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ALE+L R + KP+V YT ++D CK + +AY++ +EM A + PN V +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI FC ++ +AV + EM K +V+TFN L+ LC+ +K A + M+
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+GV NTV+Y++L++ + E+ +A+ + N MV +G D +Y +I GLC+ VD+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A L ++M + I N LI+GLC+ G + +A + EM RG+ PD++T+N L++
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC++ ++ + + +++Q +GI PD T+ L+ LCK G + DA + + + G+
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 299 TVQAYTVMI 307
+ +++++
Sbjct: 703 NHRTWSILL 711
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 146/280 (52%), Gaps = 7/280 (2%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
++N++++ L K A NVF M+ + + P ++ +M +C V E++ A + M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
K G P+ Y +I+ L K V+EA +LL+EM + D +N +I GLCK RI
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
++A K+VN M RG PD ITY L++ LCK VD A L I KP++ + L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVT--VQAYTVMINGYCKEGLCDEALALISKMESS 329
I G GRL DA+ + D ++ Y + V Y +I GY KEGL AL ++ M +
Sbjct: 360 IHGFVTHGRLDDAKAVLSD-MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G P+ +Y I++ + G+ D+ +L EM A GL N
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 32/328 (9%)
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
A + +M+ +++ + TF +++ A C + A ++ M K G PN+V Y +L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
VN+A + M G PD +++ +I GLCK ++EA K+++ M
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEM-----------------HHR------------ 224
D I Y L++GLCK+GR+ A L + H R
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 225 ---GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G PDV TYN L+ K V A+ ++ +++++G KP+V++YTIL+DG CK+G++
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+A + ++ G + +I+ +CKE EA+ + +M G PD T+ +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 342 IRALFEKGENDKGEKLLREMVARGLLYN 369
I L E E LLR+M++ G++ N
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVAN 528
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 141/245 (57%), Gaps = 3/245 (1%)
Query: 7 ALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
A+E+ R R+ KPDV + ++I LC+ + A L +M+++ + N VTY +LI
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
F G++++A L+NEM+ + ++ T+N L+ LC+ G V +A+++F M++ G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ +S + L++G C V +A + MV RG +PD+ ++ +INGLC+ +++ +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
++ +E I DT+ +N+L+ LCK G + DA L++E G P+ T++ LL +
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Query: 244 HNVDK 248
+D+
Sbjct: 718 ETLDR 722
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 91 HTFNI---LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
H+F++ L+ L G K + M +G+ + S+M Y +
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY---DKAGFPGQT 165
Query: 148 FNLMVK-RGV---SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
LM++ R V P +SY +++ L A + +M S KI + ++
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
C + I A L+ +M G P+ + Y L+ L K + V++A+ L++E+ G P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
D T+ +I GLCK R+ +A ++ +LI+G+ Y ++NG CK G D A L
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
++ P+ V + +I G D + +L +MV
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 153 KRGVSPDVQSYTIIINGLC---KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
+ G Y ++I L + K +D +LL +M E I+ + S++ K G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTID---RLLIQMKDEGIVFKESLFISIMRDYDKAG 160
Query: 210 RISDAWKLVNEMHH-RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
+L+ EM + P +YN +L++L + A + ++ + I P +FT+
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+++ C V + A + +D+ G Y +I+ K +EAL L+ +M
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G +PDA T+ +I L + ++ K++ M+ RG
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 201/349 (57%), Gaps = 1/349 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD YT++I C+ K + A+ +++EM K N V YT LI+G C+ ++ +A+ L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M V T+ +L+ +LC EA N+ M + G+KPN +Y+ L+D C
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ KA+++ M+++G+ P+V +Y +ING CK M+++A +++ M S K+ +T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN LI G CK + A ++N+M R PDV+TYN L+D C+S N D A L+ +
Sbjct: 431 YNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D+G+ PD +TYT +ID LCK R+++A ++F + KG N V YT +I+GYCK G D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA ++ KM S +P+++T+ +I L G+ + L +MV GL
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 193/349 (55%), Gaps = 1/349 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V YT +I SLC + S+A +L EM I PN TYT LI C + ++A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ K + V T+N L++ CK G +++A +V +M + + PNT +Y+ L+ GYC
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC- 439
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V+KA + N M++R V PDV +Y +I+G C+ D A++LL M+ ++ D
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y S+ID LCK R+ +A L + + +G P+V+ Y L+D CK+ VD+A +++++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ P+ T+ LI GLC G+LK+A + + ++ G TV T++I+ K+G D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A + +M SSG PDA TY I+ +G E ++ +M G+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 191/350 (54%), Gaps = 1/350 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KP++ YT +IDSLC A +L +M+ K + PN +TY +LI G+C G ++ AV
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
++ M +++ T+N L+ CK NV +A V M+++ V P+ V+Y+SL+DG
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + A + +LM RG+ PD +YT +I+ LCK K V+EA L D + + + +
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ Y +LIDG CK G++ +A ++ +M + P+ +T+N L+ LC + +A L ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ G++P V T TILI L K G A FQ +L G YT I YC+EG
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+A +++KM +G PD TY +I+ + G+ + +L+ M G
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 197/344 (57%), Gaps = 4/344 (1%)
Query: 7 ALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
A ELL + L K P+V+ Y +I+ CK ++ DA D+ M ++++ PN TY LI
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
G+C + +A+G+LN+M+ +++ +V T+N L+D C+ GN A + ++M +G+ P
Sbjct: 437 GYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ +Y+S++D C K V +A D+F+ + ++GV+P+V YT +I+G CK VDEA +L
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
++M S+ + +++ +N+LI GLC G++ +A L +M G P V T L+ L K
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
+ D A + +++ G KPD TYT I C+ GRL DA+++ + G + + Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+ +I GY G + A ++ +M +G P T+ +I+ L E
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 176/345 (51%), Gaps = 36/345 (10%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y T+++SL + LV + +Y EM+ ++ PN
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN---------------------------- 217
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
++T+N +V+ CK GNV+EA + +++ G+ P+ +Y+SL+ GYC K+++
Sbjct: 218 -------IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
A +FN M +G + +YT +I+GLC + +DEA L +M ++ Y LI
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
LC R S+A LV EM G P++ TY L+D LC +KA L+ ++ ++G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+V TY LI+G CK G ++DA ++ + + + + + Y +I GYCK + +A+ +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGV 449
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++KM +PD VTY +I G D +LL M RGL+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 185/396 (46%), Gaps = 54/396 (13%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E + L ++ V P+VVMYT +ID CK V +A+ + +M++K PN++T+ +LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 63 YGFCIVGQLQQAVGLLNEMI------------------LKRMDV---------------- 88
+G C G+L++A L +M+ LK D
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 89 -EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
+ HT+ + C+EG + +A+++ A M + GV P+ +YSSL+ GY + + N A D+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKM------------------VDEAWKLLDEMHSE 189
M G P ++ +I L ++K D +LL++M
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMH-HRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + Y LI G+C++G + A K+ + M + G P + +N LL CK ++
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A ++ ++ G P + + +LI GL K G + +FQ++L GY A+ ++I+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
G K+GL + L + ME +G + TY ++I
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 55/411 (13%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L R+++ PDVV Y ++ID C+ AY L S M + + P+ TYTS+I C
Sbjct: 452 KMLERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++A L + + K ++ V + L+D CK G V EA + M+ + PN++++
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ G C ++ +A + MVK G+ P V + TI+I+ L K D A+ +M S
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL----------- 237
D Y + I C+ GR+ DA ++ +M G PD+ TY+ L+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 238 --DV-------------------------------------LCKSHNV---DKAIALIKE 255
DV LC N+ D + L+++
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI-KGYNVTVQAYTVMINGYCKEG 314
+ + + P+ +Y LI G+C+VG L+ A+++F + +G + + + +++ CK
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+EA ++ M G +P + +++I L++KGE ++G + + ++ G
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 127/242 (52%)
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y++L++ V++ K ++ M++ V P++ +Y ++NG CK+ V+EA + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D Y SLI G C+ + A+K+ NEM +G + + Y L+ LC + +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A+ L +++D P V TYT+LI LC R +A + +++ G + YTV+I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ C + ++A L+ +M G MP+ +TY +I ++G + ++ M +R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 368 YN 369
N
Sbjct: 426 PN 427
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%)
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
CYN+L++ L + G + + ++ EM P++ TYN +++ CK NV++A + +I
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ G+ PD FTYT LI G C+ L A ++F ++ +KG AYT +I+G C
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
DEA+ L KM+ P TY ++I++L + L++EM G+ N
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 202/351 (57%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+V Y +I +C+ + +A+ L M K P+ ++Y++++ G+C G+L + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
M K + + + ++ LC+ + EA+ F+ M++QG+ P+TV Y++L+DG+C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ A F M R ++PDV +YT II+G C+I + EA KL EM + + D++ +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
LI+G CK G + DA+++ N M G P+V+TY L+D LCK ++D A L+ E+
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
G++P++FTY +++GLCK G +++A ++ + G N YT +++ YCK G D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
A ++ +M G P VT+ +++ G + GEKLL M+A+G+ N
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 205/359 (57%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+E+++R+ +KP+ +Y +II LC+ +++A + +SEM+ + I P+ V YT+LI GFC
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G ++ A EM + + +V T+ ++ C+ G++ EA +F M +G++P++V+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L++GYC + A + N M++ G SP+V +YT +I+GLCK +D A +LL EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + YNS+++GLCK G I +A KLV E G D +TY L+D CKS +D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
KA ++KE+ +G++P + T+ +L++G C G L+D +++ +L KG + ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
YC A A+ M S G PD TYE +++ + + L +EM +G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 202/366 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E A + RQ + PD V+YTT+ID CK + A + EM ++ I P+ +TYT+
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I GFC +G + +A L +EM K ++ + TF L++ CK G++K+A V M++ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+Y++L+DG C +++ A ++ + M K G+ P++ +Y I+NGLCK ++EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL+ E + + ADT+ Y +L+D CK G + A +++ EM +G P ++T+N L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C ++ L+ + +GI P+ T+ L+ C LK A I++D+ +G
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+ Y ++ G+CK EA L +M+ G TY ++I+ ++ + + ++ +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 361 MVARGL 366
M GL
Sbjct: 692 MRREGL 697
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 205/364 (56%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L L+ + PDV+ Y+T+++ C+ + + L M K + PN+ Y S+I
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
C + +L +A +EMI + + + + L+D CK G+++ A F M + +
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ ++Y++++ G+C + ++ +A +F+ M +G+ PD ++T +ING CK + +A+++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+ M + + Y +LIDGLCK G + A +L++EM G P++ TYN +++ LCK
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
S N+++A+ L+ E + G+ D TYT L+D CK G + AQEI +++L KG T+
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ V++NG+C G+ ++ L++ M + G P+A T+ +++ + + ++M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 363 ARGL 366
+RG+
Sbjct: 624 SRGV 627
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 178/326 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PDV+ YT II C+ + +A L+ EM K + P++VT+T LI G+C G ++ A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ N MI V T+ L+D LCKEG++ A + M K G++PN +Y+S+++G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +A + G++ D +YT +++ CK +D+A ++L EM + +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ +N L++G C G + D KL+N M +G P+ T+N L+ C +N+ A A+ K+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ +G+ PD TY L+ G CK +K+A +FQ++ KG++V+V Y+V+I G+ K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 316 CDEALALISKMESSGRMPDAVTYEII 341
EA + +M G D ++
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFF 707
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 163/302 (53%), Gaps = 1/302 (0%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNTVS 127
G L++A + +M+ + + V + N+ + L K+ A VF + GV N S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ C + + +A + LM +G +PDV SY+ ++NG C+ +D+ WKL++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + ++ Y S+I LC++ ++++A + +EM +G PD + Y L+D CK ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A E+ + I PDV TYT +I G C++G + +A ++F ++ KG +T +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
NGYCK G +A + + M +G P+ VTY +I L ++G+ D +LL EM GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 368 YN 369
N
Sbjct: 489 PN 490
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 3/258 (1%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ +A ELL ++P++ Y +I++ LCK + +A L E A + + VTY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ +C G++ +A +L EM+ K + + TFN+L++ C G +++ + + M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ PN +++SL+ YC+ + A I+ M RGV PD ++Y ++ G CK + + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
AW L EM + Y+ LI G K + +A ++ ++M G D ++ D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Query: 239 VLCKSHNVDKAIALIKEI 256
K D + I EI
Sbjct: 710 TKYKGKRPDTIVDPIDEI 727
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 202/351 (57%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+V Y +I +C+ + +A+ L M K P+ ++Y++++ G+C G+L + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
M K + + + ++ LC+ + EA+ F+ M++QG+ P+TV Y++L+DG+C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ A F M R ++PDV +YT II+G C+I + EA KL EM + + D++ +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
LI+G CK G + DA+++ N M G P+V+TY L+D LCK ++D A L+ E+
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
G++P++FTY +++GLCK G +++A ++ + G N YT +++ YCK G D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
A ++ +M G P VT+ +++ G + GEKLL M+A+G+ N
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 205/359 (57%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+E+++R+ +KP+ +Y +II LC+ +++A + +SEM+ + I P+ V YT+LI GFC
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G ++ A EM + + +V T+ ++ C+ G++ EA +F M +G++P++V+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L++GYC + A + N M++ G SP+V +YT +I+GLCK +D A +LL EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + YNS+++GLCK G I +A KLV E G D +TY L+D CKS +D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
KA ++KE+ +G++P + T+ +L++G C G L+D +++ +L KG + ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
YC A A+ M S G PD TYE +++ + + L +EM +G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 202/366 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E A + RQ + PD V+YTT+ID CK + A + EM ++ I P+ +TYT+
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I GFC +G + +A L +EM K ++ + TF L++ CK G++K+A V M++ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+Y++L+DG C +++ A ++ + M K G+ P++ +Y I+NGLCK ++EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL+ E + + ADT+ Y +L+D CK G + A +++ EM +G P ++T+N L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C ++ L+ + +GI P+ T+ L+ C LK A I++D+ +G
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+ Y ++ G+CK EA L +M+ G TY ++I+ ++ + + ++ +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 361 MVARGL 366
M GL
Sbjct: 692 MRREGL 697
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 205/364 (56%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L L+ + PDV+ Y+T+++ C+ + + L M K + PN+ Y S+I
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
C + +L +A +EMI + + + + L+D CK G+++ A F M + +
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ ++Y++++ G+C + ++ +A +F+ M +G+ PD ++T +ING CK + +A+++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+ M + + Y +LIDGLCK G + A +L++EM G P++ TYN +++ LCK
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
S N+++A+ L+ E + G+ D TYT L+D CK G + AQEI +++L KG T+
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ V++NG+C G+ ++ L++ M + G P+A T+ +++ + + ++M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 363 ARGL 366
+RG+
Sbjct: 624 SRGV 627
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 178/326 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PDV+ YT II C+ + +A L+ EM K + P++VT+T LI G+C G ++ A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ N MI V T+ L+D LCKEG++ A + M K G++PN +Y+S+++G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +A + G++ D +YT +++ CK +D+A ++L EM + +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ +N L++G C G + D KL+N M +G P+ T+N L+ C +N+ A A+ K+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ +G+ PD TY L+ G CK +K+A +FQ++ KG++V+V Y+V+I G+ K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 316 CDEALALISKMESSGRMPDAVTYEII 341
EA + +M G D ++
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFF 707
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 163/302 (53%), Gaps = 1/302 (0%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNTVS 127
G L++A + +M+ + + V + N+ + L K+ A VF + GV N S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ C + + +A + LM +G +PDV SY+ ++NG C+ +D+ WKL++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + ++ Y S+I LC++ ++++A + +EM +G PD + Y L+D CK ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A E+ + I PDV TYT +I G C++G + +A ++F ++ KG +T +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
NGYCK G +A + + M +G P+ VTY +I L ++G+ D +LL EM GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 368 YN 369
N
Sbjct: 489 PN 490
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 3/258 (1%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ +A ELL ++P++ Y +I++ LCK + +A L E A + + VTY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ +C G++ +A +L EM+ K + + TFN+L++ C G +++ + + M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ PN +++SL+ YC+ + A I+ M RGV PD ++Y ++ G CK + + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
AW L EM + Y+ LI G K + +A ++ ++M G D ++ D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Query: 239 VLCKSHNVDKAIALIKEI 256
K D + I EI
Sbjct: 710 TKYKGKRPDTIVDPIDEI 727
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 211/365 (57%), Gaps = 6/365 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++RR+ ++P+V + +I++LCK ++ A D+ +M PN V+Y +LI G+C +
Sbjct: 213 EMIRRK-IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 69 G---QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G ++ +A +L EM+ + + TFNIL+D K+ N+ + VF M+ Q VKPN
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
+SY+SL++G C ++++A + + MV GV P++ +Y +ING CK M+ EA +
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
+ + + T YN LID CKLG+I D + L EM G PDV TYN L+ LC++ N
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
++ A L ++ +G+ PD+ T+ IL++G C+ G + A + +++ G Y +
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 306 MINGYCKEGLCDEALALISKMESSGRMP-DAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++ GYCKEG A + ++ME R+ + +Y ++++ +KG+ + LL EM+ +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 365 GLLYN 369
GL+ N
Sbjct: 571 GLVPN 575
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 164/296 (55%), Gaps = 2/296 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M + A L+ + V P++ + +ID KD + + ++ EM+ + + PN ++Y S
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G C G++ +A+ + ++M+ + + T+N L++ CK +KEA ++F + QG
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P T Y+ L+D YC + +++ + M + G+ PDV +Y +I GLC+ ++ A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL D++ S K + D + ++ L++G C+ G A L+ EM G P +TYN ++
Sbjct: 457 KLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 241 CKSHNVDKAIALIKEIQ-DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
CK N+ A + +++ ++ ++ +V +Y +L+ G + G+L+DA + ++L KG
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 153/274 (55%), Gaps = 3/274 (1%)
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
L+ AL KE + + V+ M+++ ++PN +++ +++ C ++NKA+D+ M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWK---LLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
SP+V SY +I+G CK+ + +K +L EM + + +N LIDG K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+ K+ EM + P+VI+YN L++ LC + +AI++ ++ G++P++ TY LI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+G CK LK+A ++F + +G T + Y ++I+ YCK G D+ AL +ME G +
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
PD TY +I L G + +KL ++ ++GL
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 192 IADTICYNSLIDGLCKLG-----RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ D +C NS+I + L R ++ + G ++ PL+ L K +
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS 204
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
+ KE+ + I+P+VFT+ ++I+ LCK G++ A+++ +D+ + G + V +Y +
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 307 INGYCK---EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE-KLLREMV 362
I+GYCK G +A A++ +M + P+ T+ I+I F K +N G K+ +EM+
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG-FWKDDNLPGSMKVFKEML 323
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 211/368 (57%), Gaps = 4/368 (1%)
Query: 3 ETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
+ S A+ L+ R +VK PD+V Y +I+ LCK A +L ++M +I + V Y
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++I G C + A L N+M K + +V T+N L+ LC G +A + + M+++
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDE 178
+ P+ V +++L+D + ++ +A+ +++ MVK + PDV +Y +I G CK K V+E
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++ EM ++ +T+ Y +LI G + +A + +M G PD++TYN LLD
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + NV+ A+ + + +Q + +K D+ TYT +I+ LCK G+++D ++F + +KG
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V YT M++G+C++GL +EA AL +M+ G +P++ TY +IRA G+ +L+
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELI 554
Query: 359 REMVARGL 366
+EM + G
Sbjct: 555 KEMRSCGF 562
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 198/358 (55%), Gaps = 9/358 (2%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE AL LL + ++ DVV+Y TIID LCK K + DA+DL+++M K I P+ TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI C G+ A LL++M+ K ++ ++ FN L+DA KEG + EA+ ++ M+K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 119 -QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ P+ V+Y++L+ G+C K V + ++F M +RG+ + +YT +I+G + + D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
A + +M S+ + D + YN L+DGLC G + A + M R D++TY ++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
+ LCK+ V+ L + +G+KP+V TYT ++ G C+ G ++A +F ++ G
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 298 VTVQAYTVMINGYCKEGLCDEALA--LISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
Y +I ++G DEA + LI +M S G DA T+ ++ L + G DK
Sbjct: 529 PNSGTYNTLIRARLRDG--DEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDK 583
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 186/350 (53%), Gaps = 1/350 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V ++ ++ ++ K L +M I N TY+ I FC QL A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + T N L++ C + EA + M++ G +P+TV++++L+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + MV +G PD+ +Y +INGLCK D A LL++M KI AD +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++IDGLCK + DA+ L N+M +G PDV TYNPL+ LC A L+ ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT-VQAYTVMINGYCKEGLC 316
++ I PD+ + LID K G+L +A++++ +++ + V AY +I G+CK
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+E + + +M G + + VTY +I F+ + D + + ++MV+ G+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 179/335 (53%), Gaps = 1/335 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ ++ Y+ I+ C+ +S A + +M+ P+ VT SL+ GFC ++ +AV
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ + TF LV L + EA + M+ +G +P+ V+Y ++++G
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C E + A ++ N M K + DV Y II+GLCK K +D+A+ L ++M ++ I D
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YN LI LC GR SDA +L+++M + PD++ +N L+D K + +A L E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 256 -IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
++ + PDV Y LI G CK R+++ E+F+++ +G YT +I+G+ +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
CD A + +M S G PD +TY I++ L G
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 179/339 (52%), Gaps = 1/339 (0%)
Query: 32 KDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVH 91
+D + DA L+ +MV R P+ V ++ L+ + + + L +M + ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T++I ++ C+ + A + MMK G P+ V+ +SL++G+C +++A + + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
V+ G PD ++T +++GL + EA L++ M + D + Y ++I+GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
A L+N+M DV+ YN ++D LCK ++D A L +++ +GIKPDVFTY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I LC GR DA + D+L K N + + +I+ + KEG EA L +M S
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 332 -MPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD V Y +I+ + ++G ++ REM RGL+ N
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 224 bits (570), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 198/350 (56%), Gaps = 1/350 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD T I+ +LC++ LV+ A + +M+ PN + +TSLI G C G ++QA +
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV-KPNTVSYSSLMDGYC 136
L EM+ V+T L+D LCK G ++A +F +++ KPN +Y+S++ GYC
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++N+A+ +F+ M ++G+ P+V +YT +ING CK A++L++ M E + +
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+ ID LCK R +A++L+N+ G D +TY L+ CK +++++A+A +
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
G + D+ ILI C+ ++K+++ +FQ ++ G T + YT MI+ YCKEG
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
D AL M+ G +PD+ TY +I L +K D+ KL M+ RGL
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 188/358 (52%), Gaps = 1/358 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ Q + P + +++ + L+ A +++ EM + + P++ +Y ++ G G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+Q+A L MI + + T +++ ALC+ G V A F M+ G KPN ++++S
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL-LDEMHSE 189
L+DG C + +A ++ MV+ G P+V ++T +I+GLCK ++A++L L + S+
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+ Y S+I G CK +++ A L + M +G P+V TY L++ CK+ + +A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L+ + D+G P+++TY ID LCK R +A E+ G YT++I
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
CK+ ++ALA +M +G D I+I A + + + E+L + +V+ GL+
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 164/307 (53%), Gaps = 1/307 (0%)
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
++ F +G+L +AVG++ +M + + T N +++ + G ++ A+NVF M +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V P++ SY ++ G ++ +A M++RG PD + T+I+ LC+ +V+ A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+M + I + SLIDGLCK G I A++++ EM G P+V T+ L+D L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 241 CKSHNVDKAIAL-IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
CK +KA L +K ++ KP+V TYT +I G CK +L A+ +F + +G
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
V YT +ING+CK G A L++ M G MP+ TY I +L +K + +LL
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 360 EMVARGL 366
+ + GL
Sbjct: 453 KAFSCGL 459
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 4/359 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+L+R KP+V YT++I CK+ ++ A L+S M + + PN TYT+LI G C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G +A L+N M + ++T+N +D+LCK+ EA + G++ + V+
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ L+ C ++N+A F M K G D++ I+I C+ K + E+ +L +
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
S +I Y S+I CK G I A K + M G PD TY L+ LCK VD
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A L + + D+G+ P T L CK +A + + + K + TV+ ++
Sbjct: 586 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVR---TLV 642
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
C E A K+ D VT A E G+N+ L E ++RG+
Sbjct: 643 RKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLT-ERISRGV 700
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMV-AKRIPPNAVT 57
G A E+L R KP+V +T +ID LCK A+ L+ ++V + PN T
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
YTS+I G+C +L +A L + M + + V+T+ L++ CK G+ A + +M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+G PN +Y++ +D C +A ++ N G+ D +YTI+I CK ++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A M+ AD N LI C+ ++ ++ +L + G P TY ++
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
CK ++D A+ ++ G PD FTY LI GLCK + +A ++++ ++ +G +
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 298 VTVQAYTVMINGYCKEGLCDEALALI 323
+ YCK D A A+I
Sbjct: 601 PPEVTRVTLAYEYCKRN--DSANAMI 624
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 165/309 (53%), Gaps = 1/309 (0%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+++A + +M + + P+++T ++ +G ++ A + +EM ++ + + ++ +
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+V ++G ++EA M+++G P+ + + ++ C VN+A F M+ G
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
P++ ++T +I+GLCK + +A+++L+EM + + +LIDGLCK G A+
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 216 KLVNEMHHRGT-PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+L ++ T P+V TY ++ CK +++A L +++QG+ P+V TYT LI+G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
CK G A E+ + +G+ + Y I+ CK+ EA L++K S G D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 335 AVTYEIIIR 343
VTY I+I+
Sbjct: 463 GVTYTILIQ 471
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G + EA + M QG+ P++++ + +++ + + A+++F+ M RGV PD SY
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
+++ G + + EA + L M I D ++ LC+ G ++ A +M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
G P++I + L+D LCK ++ +A +++E+ G KP+V+T+T LIDGLCK G +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 284 AQEIFQDILIK-GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A +F ++ Y V YT MI GYCKE + A L S+M+ G P+ TY +I
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 343 RALFEKGENDKGEKLLREMVARGLLYN 369
+ G + +L+ M G + N
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPN 427
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 138/276 (50%), Gaps = 16/276 (5%)
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
+ D+L GN+++A V M++ + + +N+A + M +
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQNQ 176
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
G++P + ++ ++ +++ A + DEM ++ D+ Y ++ G + G+I +A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+ + M RG PD T +L LC++ V++AI +++ D G KP++ +T LIDG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM-ESSGRMP 333
LCK G +K A E+ ++++ G+ V +T +I+G CK G ++A L K+ S P
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ TY +I ++ + ++ E L M +GL N
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 41/328 (12%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G + L+ + P++ Y IDSLCK +AY+L ++ + + + VTYT
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI C + QA+ M + ++ NIL+ A C++ +KE++ +F +++ G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P +Y+S++ YC +++ A F+ M + G PD +Y +I+GLCK MVDEA
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL Y ++ID RG P +T L
Sbjct: 589 KL---------------YEAMID--------------------RGLSPPEVTRVTLAYEY 613
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN--- 297
CK ++ A+ L++ + K + T L+ LC ++ A FQ +L K +
Sbjct: 614 CKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADR 670
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISK 325
VT+ A+T + K L + IS+
Sbjct: 671 VTLAAFTTACSESGKNNLVTDLTERISR 698
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 193/368 (52%), Gaps = 36/368 (9%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + T+++ LCK V A ++ M+ + P+ TY S+I G C +G++++AV +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L++MI + T+N L+ LCKE V+EA + V+ +G+ P+ +++SL+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 138 VKEVNKAKDIFNLMVKRGVSPD-----------------------------------VQS 162
+ A ++F M +G PD V +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y +I+G CK EA ++ DEM + +++ YN+LIDGLCK R+ DA +L+++M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
G PD TYN LL C+ ++ KA +++ + G +PD+ TY LI GLCK GR++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM-ESSGRMPDAVTYEII 341
A ++ + I +KG N+T AY +I G ++ EA+ L +M E + PDAV+Y I+
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 342 IRALFEKG 349
R L G
Sbjct: 653 FRGLCNGG 660
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 199/370 (53%), Gaps = 6/370 (1%)
Query: 2 GETSAALELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAV 56
G+ AL + R Q+V+ V I+ CK+ V DA + EM + P+
Sbjct: 238 GDLDGALRI-REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
T+ +L+ G C G ++ A+ +++ M+ + D +V+T+N ++ LCK G VKEA V M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ + PNTV+Y++L+ C +V +A ++ ++ +G+ PDV ++ +I GLC +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
A +L +EM S+ D YN LID LC G++ +A ++ +M G VITYN L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+D CK++ +A + E++ G+ + TY LIDGLCK R++DA ++ ++++G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
Y ++ +C+ G +A ++ M S+G PD VTY +I L + G + K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 357 LLREMVARGL 366
LLR + +G+
Sbjct: 597 LLRSIQMKGI 606
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 181/355 (50%), Gaps = 1/355 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPD Y +++ L + +++M I P+ T+ LI C QL+ A+
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L +M + + TF ++ +EG++ A + M++ G + VS + ++ G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 136 CLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
C V A + M + G PD ++ ++NGLCK V A +++D M E D
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
YNS+I GLCKLG + +A +++++M R P+ +TYN L+ LCK + V++A L +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+ +GI PDV T+ LI GLC + A E+F+++ KG Y ++I+ C +G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
DEAL ++ +ME SG +TY +I + + + E++ EM G+ N
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 50/291 (17%)
Query: 121 VKPNTVSYSS----LMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKIKM 175
P++ + SS L+D + + A +FNL K+ SP+ Y I+ L +
Sbjct: 39 ASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGS 98
Query: 176 VDEAWKLLDEMHSEK------------------------------------IIADTICYN 199
D+ K+L++M S + + DT YN
Sbjct: 99 FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYN 158
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHR----GTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+++ L ++ KLV H + G PDV T+N L+ LC++H + AI ++++
Sbjct: 159 RMLNLLVD----GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLED 214
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ G+ PD T+T ++ G + G L A I + ++ G + + + V+++G+CKEG
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 316 CDEALALISKMESS-GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
++AL I +M + G PD T+ ++ L + G +++ M+ G
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 196/349 (56%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+VV+YTT+ID CK + A DL+ EM + N TYT LI G G +Q +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M + ++T+N +++ LCK+G K+A VF M ++GV N V+Y++L+ G C
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++N+A + + M G++P++ +Y +I+G C + + +A L ++ S + +
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN L+ G C+ G S A K+V EM RG P +TY L+D +S N++KAI L ++
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ G+ PDV TY++LI G C G++ +A +F+ ++ K Y MI GYCKEG
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
AL L+ +ME P+ +Y +I L ++ ++ + E+L+ +M+ G+
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 200/366 (54%), Gaps = 3/366 (0%)
Query: 4 TSAAL--ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
TS++L L + K +Y II+S + + ++ + ++EMV P + + L
Sbjct: 76 TSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYL 135
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ Q NE K + ++V++F IL+ C+ G ++++ ++ + + G
Sbjct: 136 LTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF 194
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
PN V Y++L+DG C E+ KAKD+F M K G+ + ++YT++INGL K + + ++
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ ++M + + + YN +++ LCK GR DA+++ +EM RG +++TYN L+ LC
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ +++A ++ +++ GI P++ TY LIDG C VG+L A + +D+ +G + ++
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y ++++G+C++G A ++ +ME G P VTY I+I +K +L M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 362 VARGLL 367
GL+
Sbjct: 435 EELGLV 440
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
YT +I+ L K+ + +++Y +M + PN TY ++ C G+ + A + +EM
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ + + T+N L+ LC+E + EA V M G+ PN ++Y++L+DG+C V ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
KA + + RG+SP + +Y I+++G C+ A K++ EM I + Y LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
D + + A +L M G PDV TY+ L+ C +++A L K + ++ +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+ Y +I G CK G A ++ +++ K V +Y MI CKE EA L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 323 ISKMESSGRMPDAVTYEIIIRA 344
+ KM SG P +I RA
Sbjct: 536 VEKMIDSGIDPSTSILSLISRA 557
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 151/267 (56%), Gaps = 3/267 (1%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G T A ++ +R + V ++V Y T+I LC++ +++A + +M + I PN +TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI GFC VG+L +A+ L ++ + + + T+NILV C++G+ A + M +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+KP+ V+Y+ L+D + + KA + M + G+ PDV +Y+++I+G C ++E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +L M + + + YN++I G CK G A KL+ EM + P+V +Y +++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDV 265
VLCK +A L++++ D GI P
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 160/287 (55%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++ V P++ Y +++ LCKD DA+ ++ EM + + N VTY +LI G C
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+L +A ++++M ++ + T+N L+D C G + +A ++ + +G+ P+ V+Y
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+ G+C + + A + M +RG+ P +YTI+I+ + +++A +L M
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
++ D Y+ LI G C G++++A +L M + P+ + YN ++ CK + +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
A+ L+KE++++ + P+V +Y +I+ LCK + K+A+ + + ++ G
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 118/230 (51%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E + ++ ++ + P+++ Y T+ID C + A L ++ ++ + P+ VTY
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ GFC G A ++ EM + + T+ IL+D + N+++A + M + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P+ +YS L+ G+C+ ++N+A +F MV++ P+ Y +I G CK A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
KLL EM +++ + Y +I+ LCK + +A +LV +M G P
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 191/330 (57%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ + + L+ + +P+VV+Y T+ID LCK+ ++ A +L +EM K + + VTY +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ G C G+ A +L +M+ + ++ +V TF L+D K+GN+ EA+ ++ M++
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V PN V+Y+S+++G C+ + AK F+LM +G P+V +Y +I+G CK +MVDE
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL M E AD YN+LI G C++G++ A + M R PD+IT+ LL L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C + ++ A+ ++++ + Y I+I GLCK +++ A E+F + ++G
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSG 330
+ YT+MI G CK G EA LI +M+ G
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 180/327 (55%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
DA+ L+ EMV + P+ V +T L+ + + + + +M L + ++++F IL+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
C+ + A +V MMK G +P+ V++ SL+ G+CLV + A + LMVK G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+V Y +I+GLCK ++ A +LL+EM + + AD + YN+L+ GLC GR SDA ++
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
+ +M R PDV+T+ L+DV K N+D+A L KE+ + P+ TY +I+GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
GRL DA++ F + KG V Y +I+G+CK + DE + L +M G D T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 338 YEIIIRALFEKGENDKGEKLLREMVAR 364
Y +I + G+ + MV+R
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 197/387 (50%), Gaps = 35/387 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D+ +T +I C+ +S A + +M+ P+ VT+ SL++GFC+V ++ A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+ M+ + V +N L+D LCK G + A + M K+G+ + V+Y++L+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + A + M+KR ++PDV ++T +I+ K +DEA +L EM + +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNS+I+GLC GR+ DA K + M +G P+V+TYN L+ CK VD+ + L +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF--------------QDILIKGYNVT-- 299
+ +G D+FTY LI G C+VG+L+ A +IF IL+ G V
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 300 -------------------VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
+ AY +MI+G CK ++A L ++ G PDA TY I
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 341 IIRALFEKGENDKGEKLLREMVARGLL 367
+I L + G + ++L+R M G++
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGII 488
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 141/263 (53%), Gaps = 3/263 (1%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S A +LR ++ + PDVV +T +ID K + +A +LY EM+ + PN VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
S+I G C+ G+L A + M K V T+N L+ CK V E +F M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G + +Y++L+ GYC V ++ A DIF MV R V+PD+ ++ I+++GLC ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A D+M + + YN +I GLCK ++ AW+L + G PD TY ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 239 VLCKSHNVDKAIALIKEIQDQGI 261
LCK+ +A LI+ ++++GI
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 150/306 (49%), Gaps = 6/306 (1%)
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ---G 120
GF + + A L EM+ + + F L+ A N++ + V K G
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTA---TANLRRYETVIYFSQKMELYG 101
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ + S++ L+ +C ++ A + M+K G P + ++ +++G C + + +A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
L+ M + + YN+LIDGLCK G ++ A +L+NEM +G DV+TYN LL L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C S A +++++ + I PDV T+T LID K G L +AQE++++++ +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y +ING C G +A M S G P+ VTY +I + D+G KL +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 361 MVARGL 366
M G
Sbjct: 342 MSCEGF 347
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%)
Query: 107 KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTII 166
++A +F M+ P+ V ++ L+ ++ M G+S D+ S+TI+
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
I+ C+ + A +L +M + + SL+ G C + RI DA+ LV M G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
P+V+ YN L+D LCK+ ++ A+ L+ E++ +G+ DV TY L+ GLC GR DA
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+ +D++ + N V +T +I+ + K+G DEA L +M S P+ VTY II L
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 347 EKGENDKGEKLLREMVARGLLYN 369
G +K M ++G N
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPN 315
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 181/284 (63%), Gaps = 3/284 (1%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T AL LL + ++ +VV+Y+T+IDSLCK + DA +L++EM K + PN +TY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI C G+ A LL++MI ++++ + TF+ L+DA K+G + +A+ ++ M+K
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + PN +YSSL++G+C++ + +AK + LM+++ P+V +Y +ING CK K VD+
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L EM ++ +T+ Y +LI G + +A + +M G P+++TYN LLD
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
LCK+ + KA+ + + +Q ++PD++TY I+I+G+CK G+ K
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 188/338 (55%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KPD V +TT+I L S+A L MV + P+ VTY +++ G C G A+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LLN+M +++ V ++ ++D+LCK + +A N+F M +GV+PN ++YSSL+ C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ A + + M++R ++P++ +++ +I+ K + +A KL +EM I +
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y+SLI+G C L R+ +A +++ M + P+V+TYN L++ CK+ VDK + L +E+
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G+ + TYT LI G + +AQ +F+ ++ G + + Y ++++G CK G
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
+A+ + ++ S PD TY I+I + + G+ G
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 192/354 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ ++ Y +I+ C+ +S A L +M+ P+ VT SL+ GFC ++ AV
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++M+ + TF L+ L EA + M+++G +P+ V+Y ++++G
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + + A ++ N M + +V Y+ +I+ LCK + D+A L EM ++ + +
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
I Y+SLI LC GR SDA +L+++M R P+++T++ L+D K + KA L +E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + I P++FTY+ LI+G C + RL +A+++ + ++ K V Y +ING+CK
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
D+ + L +M G + + VTY +I F+ + D + + ++MV+ G+ N
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 182/334 (54%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD+V ++++ C +SDA L +MV P+ VT+T+LI+G + + +AV
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L++ M+ + ++ T+ +V+ LCK G+ A N+ M ++ N V YS+++D C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ + A ++F M +GV P+V +Y+ +I+ LC +A +LL +M KI + +
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+++LID K G++ A KL EM R P++ TY+ L++ C + +A +++ +
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ P+V TY LI+G CK R+ E+F+++ +G YT +I+G+ + C
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
D A + +M S G P+ +TY I++ L + G+
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 172/312 (55%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E A ++ + ++ +PD+V Y +++ LCK A +L ++M A +I N V Y+++I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
C A+ L EM K + V T++ L+ LC G +A + + M+++ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN V++S+L+D + ++ KA+ ++ M+KR + P++ +Y+ +ING C + + EA ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
L+ M + + + + YN+LI+G CK R+ +L EM RG + +TY L+ +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ + D A + K++ G+ P++ TY IL+DGLCK G+L A +F+ + +
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 303 YTVMINGYCKEG 314
Y +MI G CK G
Sbjct: 501 YNIMIEGMCKAG 512
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 191/352 (54%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P ++ ++ ++ ++ K +M I N TY LI FC +L A+ L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + ++ T N L++ C + +A + M++ G KP+TV++++L+ G L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A + + MV+RG PD+ +Y ++NGLCK D A LL++M + KI A+ +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+++ID LCK DA L EM ++G P+VITY+ L+ LC A L+ ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++ I P++ T++ LID K G+L A++++++++ + + + Y+ +ING+C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA ++ M +P+ VTY +I + DKG +L REM RGL+ N
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 77/136 (56%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+GE LEL+ R+ P+VV Y T+I+ CK K V +L+ EM + + N VTYT+
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+GF A + +M+ + + T+NIL+D LCK G + +A VF + +
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 121 VKPNTVSYSSLMDGYC 136
++P+ +Y+ +++G C
Sbjct: 494 MEPDIYTYNIMIEGMC 509
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 203/369 (55%), Gaps = 3/369 (0%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A+E+L R L + PDV+ YT +I++ C+D V A L EM + P+ VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
L+ G C G+L +A+ LN+M V T NI++ ++C G +A+ + A M++
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G P+ V+++ L++ C + +A DI M + G P+ SY +++G CK K +D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + L+ M S D + YN+++ LCK G++ DA +++N++ +G P +ITYN ++D
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L K+ KAI L+ E++ + +KPD TY+ L+ GL + G++ +A + F + G
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ ++ G CK D A+ + M + G P+ +Y I+I L +G + +LL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 359 REMVARGLL 367
E+ +GL+
Sbjct: 578 NELCNKGLM 586
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 193/364 (53%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
GE + AL +L R V PDVV Y TI+ SLC + A ++ M+ + P+ +TYT L
Sbjct: 186 GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I C + A+ LL+EM + +V T+N+LV+ +CKEG + EA M G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+PN ++++ ++ C A+ + M+++G SP V ++ I+IN LC+ ++ A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+L++M +++ YN L+ G CK ++ A + + M RG PD++TYN +L LC
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K V+ A+ ++ ++ +G P + TY +IDGL K G+ A ++ ++ K
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y+ ++ G +EG DEA+ + E G P+AVT+ I+ L + + D+ L M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 362 VARG 365
+ RG
Sbjct: 546 INRG 549
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 195/372 (52%), Gaps = 6/372 (1%)
Query: 1 MGETSAA---LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+T A LE+L PDV+ Y +I CK +++A + M + P+ VT
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +++ C G+L+QA+ +L+ M+ + +V T+ IL++A C++ V A + M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+G P+ V+Y+ L++G C +++A N M G P+V ++ II+ +C
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A KLL +M + + +N LI+ LC+ G + A ++ +M G P+ ++YNPLL
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
CK +D+AI ++ + +G PD+ TY ++ LCK G+++DA EI + KG +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
+ Y +I+G K G +A+ L+ +M + PD +TY ++ L +G+ D+ K
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 358 LREMVARGLLYN 369
E G+ N
Sbjct: 507 FHEFERMGIRPN 518
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 163/298 (54%), Gaps = 3/298 (1%)
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G+L++ L M+ ++ L+ C+ G ++A + ++ G P+ ++
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ GYC E+N A + + M VSPDV +Y I+ LC + +A ++LD M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
D I Y LI+ C+ + A KL++EM RG PDV+TYN L++ +CK +D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+AI + ++ G +P+V T+ I++ +C GR DA+++ D+L KG++ +V + ++I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
N C++GL A+ ++ KM G P++++Y ++ ++ + D+ + L MV+RG
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N+ + + + G + + +K + M + G PD+I L+ C+ KA +++ ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 259 QGIKPDVFTYTILIDGLCKV--------------------------------GRLKDAQE 286
G PDV TY ++I G CK G+LK A E
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+ +L + V YT++I C++ A+ L+ +M G PD VTY +++ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 347 EKGENDKGEKLLREMVARGLLYN 369
++G D+ K L +M + G N
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPN 308
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 201/372 (54%), Gaps = 5/372 (1%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL L + +K V Y ++I+ CK +S A +EM+ K++ P VTY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
TSL+ G+C G++ +A+ L +EM K + ++TF L+ L + G +++A +F M +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
VKPN V+Y+ +++GYC +++KA + M ++G+ PD SY +I+GLC E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +D +H + ICY L+ G C+ G++ +A + EM RG D++ Y L+D
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
K + L+KE+ D+G+KPD YT +ID K G K+A I+ ++ +G
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL- 357
YT +ING CK G +EA L SKM+ +P+ VTY + L KGE D + +
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVE 774
Query: 358 LREMVARGLLYN 369
L + +GLL N
Sbjct: 775 LHNAILKGLLAN 786
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 204/371 (54%), Gaps = 3/371 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL L++R + V P++ +Y +IDSLCK + +A L+ M + PN VTY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+ LI FC G+L A+ L EM+ + + V+ +N L++ CK G++ A+ A M+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ ++P V+Y+SLM GYC ++NKA +++ M +G++P + ++T +++GL + ++ +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A KL +EM + + + YN +I+G C+ G +S A++ + EM +G PD +Y PL+
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + +A + + + + YT L+ G C+ G+L++A + Q+++ +G ++
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y V+I+G K L+ +M G PD V Y +I A + G+ + +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 359 REMVARGLLYN 369
M+ G + N
Sbjct: 706 DLMINEGCVPN 716
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 191/361 (52%), Gaps = 10/361 (2%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
++V Y +ID LCK + V +A + ++ K + P+ VTY +L+YG C V + + + ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+EM+ R + LV+ L K G ++EA N+ ++ GV PN Y++L+D C
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ ++A+ +F+ M K G+ P+ +Y+I+I+ C+ +D A L EM + Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
NSLI+G CK G IS A + EM ++ P V+TY L+ C ++KA+ L E+
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
+GI P ++T+T L+ GL + G ++DA ++F ++ Y VMI GYC+EG +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGEND----------KGEKLLREMVARGLLY 368
A + +M G +PD +Y +I L G+ KG L E+ GLL+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 369 N 369
Sbjct: 621 G 621
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 37/387 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPDVV Y T++ LCK + ++ EM+ R P+ +SL+ G G++++A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS------ 129
L+ ++ + + +N L+D+LCK EA+ +F M K G++PN V+YS
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 130 -----------------------------SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
SL++G+C +++ A+ M+ + + P V
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+YT ++ G C +++A +L EM + I + +L+ GL + G I DA KL NE
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M P+ +TYN +++ C+ ++ KA +KE+ ++GI PD ++Y LI GLC G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 281 LKDAQEIFQDILIKGY-NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+A+ +F D L KG + YT +++G+C+EG +EAL++ +M G D V Y
Sbjct: 593 ASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 340 IIIRALFEKGENDKGEKLLREMVARGL 366
++I + + LL+EM RGL
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 38/406 (9%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ + AL L + P + +TT++ L + L+ DA L++EM + PN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+I G+C G + +A L EM K + + +++ L+ LC G EAK + K
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ N + Y+ L+ G+C ++ +A + MV+RGV D+ Y ++I+G K K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+ LL EMH + D + Y S+ID K G +A+ + + M + G P+ +TY +++
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 239 VLCKSHNVDKAIALIKEIQD-----------------------------------QGIKP 263
LCK+ V++A L ++Q +G+
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
+ TY +LI G C+ GR+++A E+ ++ G + YT MIN C+ +A+ L
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ M G PD V Y +I GE K +L EM+ +GL+ N
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 178/344 (51%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+V + ++ L K + A +L+++MV+ I P+ YT +I C + L +A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ M DV + +N+L+D LCK+ V EA + + + +KP+ V+Y +L+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V+E ++ + M+ SP + + ++ GL K ++EA L+ + + +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN+LID LCK + +A L + M G P+ +TY+ L+D+ C+ +D A++ + E+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D G+K V+ Y LI+G CK G + A+ +++ K TV YT ++ GYC +G +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+AL L +M G P T+ ++ LF G KL EM
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 176/345 (51%), Gaps = 1/345 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAK-RIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+ +I + + V D ++ M+ K + P T ++L++G A+ L N+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ + +V+ + ++ +LC+ ++ AK + A M G N V Y+ L+DG C ++V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+A I + + + PDV +Y ++ GLCK++ + +++DEM + +SL
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
++GL K G+I +A LV + G P++ YN L+D LCK +A L + G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
+P+ TY+ILID C+ G+L A +++ G ++V Y +ING+CK G A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+++M + P VTY ++ KG+ +K +L EM +G+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 9/342 (2%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ S A E L+ K PD Y +I LC S+A + N + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T L++GFC G+L++A+ + EM+ + +D+++ + +L+D K + K + M
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+KP+ V Y+S++D + +A I++LM+ G P+ +YT +INGLCK V+E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH---RGTPPDVITYNP 235
A L +M + + + Y +D L K G + D K V E+H+ +G + TYN
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV-DMQKAV-ELHNAILKGLLANTATYNM 792
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ C+ +++A LI + G+ PD TYT +I+ LC+ +K A E++ + KG
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
AY +I+G C G +A L ++M G +P+ T
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 23/347 (6%)
Query: 42 LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR-MDVEVHTFNILVDAL 100
L SE+V++R+ V ++ G + + + N + L R D +F IL+ AL
Sbjct: 59 LSSELVSRRL--KTVHVEEILIG--TIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHAL 114
Query: 101 CKEGNVKEAKNVFAVMMKQGVKPNTV-----------------SYSSLMDGYCLVKEVNK 143
K A ++ ++ + +KP+ V S+ L+ Y + V
Sbjct: 115 VKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLD 174
Query: 144 AKDIFNLMV-KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+F +M+ K + P+V++ + +++GL K + A +L ++M S I D Y +I
Sbjct: 175 GVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI 234
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
LC+L +S A +++ M G +++ YN L+D LCK V +A+ + K++ + +K
Sbjct: 235 RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK 294
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
PDV TY L+ GLCKV + E+ ++L ++ + A + ++ G K G +EAL L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ ++ G P+ Y +I +L + + + E L M GL N
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 201/388 (51%), Gaps = 35/388 (9%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P YT +I +LC L+ A++L+ EM+ + PN TYT LI G C G++++A G
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ +M+ R+ V T+N L++ CK+G V A + VM K+ KPN +++ LM+G C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V + KA + M+ G+SPD+ SY ++I+GLC+ ++ A+KLL M+ I D +
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT------------------------ 232
+ ++I+ CK G+ A + M +G D +T
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 233 -----------YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
N +LD+L K V + +A++ +I G+ P V TYT L+DGL + G +
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ I + + + G V YT++ING C+ G +EA L+S M+ SG P+ VTY ++
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 342 IRALFEKGENDKGEKLLREMVARGLLYN 369
++ G+ D+ + +R MV RG N
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELN 685
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 199/387 (51%), Gaps = 35/387 (9%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+ V Y+ +I LC+ + +A+ L +M K P+ TYT LI C G + +A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+EMI + VHT+ +L+D LC++G ++EA V M+K + P+ ++Y++L++GYC
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V A ++ +M KR P+V+++ ++ GLC++ +A LL M + D +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN LIDGLC+ G ++ A+KL++ M+ PD +T+ +++ CK D A A + +
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ------------------DILIKGYNV- 298
+GI D T T LIDG+CKVG+ +DA I + D+L KG V
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 299 ----------------TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+V YT +++G + G + ++ M+ SG +P+ Y III
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 343 RALFEKGENDKGEKLLREMVARGLLYN 369
L + G ++ EKLL M G+ N
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 198/358 (55%), Gaps = 6/358 (1%)
Query: 13 RQLVK----PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
R++VK P V+ Y +I+ CKD V A++L + M + PN T+ L+ G C V
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ +AV LL M+ + ++ ++N+L+D LC+EG++ A + + M ++P+ +++
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+++++ +C + + A LM+++G+S D + T +I+G+CK+ +A +L+ +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+I+ N ++D L K ++ + ++ +++ G P V+TY L+D L +S ++
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
+ +++ ++ G P+V+ YTI+I+GLC+ GR+++A+++ + G + YTVM+
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA--LFEKGENDKGEKLLREMVAR 364
GY G D AL + M G + Y +++ L +KG ++ E + ++ R
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR 717
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 191/388 (49%), Gaps = 23/388 (5%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A ELL ++ KP+V + +++ LC+ A L M+ + P+ V+Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI G C G + A LL+ M ++ + TF +++A CK+G A +M++
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ + V+ ++L+DG C V + A I +VK + S +I++ L K V E
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+L +++ ++ + Y +L+DGL + G I+ +++++ M G P+V Y +++
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC+ V++A L+ +QD G+ P+ TYT+++ G G+L A E + ++ +GY +
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 299 TVQAYTVMINGYC----------KEGLCDEAL---------ALISKMESSGRMPDAVTYE 339
+ Y+ ++ G+ + + D AL LIS +E G +
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF 744
Query: 340 IIIRALFEKGENDKGEKLLREMVARGLL 367
++ R L ++G D+ L++ ++ RG+
Sbjct: 745 LVTR-LCKEGRTDESNDLVQNVLERGVF 771
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 170/328 (51%), Gaps = 13/328 (3%)
Query: 40 YDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMD-----VEVHTFN 94
+D E+ R+ N Y+SL+ + +G L + +RM+ V + +
Sbjct: 147 FDELREVFGFRL--NYPCYSSLLMSLA-----KLDLGFLAYVTYRRMEADGFVVGMIDYR 199
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
+V+ALCK G + A+ + ++K G ++ +SL+ G+C + A +F++M K
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 155 -GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
+P+ SY+I+I+GLC++ ++EA+ L D+M + T Y LI LC G I
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A+ L +EM RG P+V TY L+D LC+ +++A + +++ I P V TY LI+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
G CK GR+ A E+ + + V+ + ++ G C+ G +A+ L+ +M +G P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREM 361
D V+Y ++I L +G + KLL M
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 172/365 (47%), Gaps = 28/365 (7%)
Query: 4 TSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRI---PPNAVTYTS 60
SA L L+ R+ + D V TT+ID +CK DA + +V RI P +
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
++ C V + +G +N++ L V T+ LVD L + G++ + + +M G
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVP---SVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN Y+ +++G C V +A+ + + M GVSP+ +YT+++ G +D A
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 181 KLLDEMHSEKIIADTICYNSLIDG--LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+ + M + Y+SL+ G L + G + V+++ R T P+ I N L+
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI--NELIS 729
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
V+ + + + L+ LCK GR ++ ++ Q++L +G +
Sbjct: 730 VVEQLGGCISGLCI-----------------FLVTRLCKEGRTDESNDLVQNVLERGVFL 772
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+A +++ YC + + + LI+ + SG +P ++ ++I+ L ++G+ ++ +L+
Sbjct: 773 E-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Query: 359 REMVA 363
E++
Sbjct: 832 MELLT 836
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
CY+SL+ L KL A+ M G +I Y +++ LCK+ + A + +I
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ--AYTVMINGYCKEG 314
G D T L+ G C+ L+DA ++F D++ K +Y+++I+G C+ G
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVG 280
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+EA L +M G P TY ++I+AL ++G DK L EM+ RG
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 45/329 (13%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P VV YTT++D L + ++ ++ + M PN YT +I G C G++++A L
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L+ M + T+ ++V G + A M+++G + N YSSL+ G+ L
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
Query: 138 VKEV--NKAKDIFNLMVKRGVSPD--------VQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ N + + + R P+ V+ I+GLC
Sbjct: 699 SQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF-------------- 744
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
L+ LCK GR ++ LV + RG + + +++ C
Sbjct: 745 -------------LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHT 790
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
K + LI + G P ++ ++I GL K G + A+E+ ++L N V+ V+
Sbjct: 791 KCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTS--NGVVEKSGVLT 848
Query: 308 NGYC-----KEGLCDEALALISKMESSGR 331
C + G C E + L+ ++ R
Sbjct: 849 YVECLMEGDETGDCSEVIDLVDQLHCRER 877
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 196/365 (53%), Gaps = 3/365 (0%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G AA+ELL + + V DV Y +I LC+ ++ Y L +M + I PN VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI GF G++ A LLNEM+ + TFN L+D EGN KEA +F +M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P+ VSY L+DG C E + A+ + M + GV +YT +I+GLCK +DE
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A LL+EM + I D + Y++LI+G CK+GR A ++V ++ G P+ I Y+ L+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C+ + +AI + + + +G D FT+ +L+ LCK G++ +A+E + + G
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
++ +INGY G +A ++ +M G P TY +++ L + G + EK L
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 359 REMVA 363
+ + A
Sbjct: 642 KSLHA 646
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 183/366 (50%), Gaps = 1/366 (0%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L + + + PD+V Y+ +I+ CK A ++ + + PN + Y++LI
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
Y C +G L++A+ + MIL+ + TFN+LV +LCK G V EA+ M G+
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PNTVS+ L++GY E KA +F+ M K G P +Y ++ GLCK + EA K
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
L +H+ DT+ YN+L+ +CK G ++ A L EM R PD TY L+ LC+
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 243 SHNVDKAIALIKEIQDQG-IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
AI KE + +G + P+ YT +DG+ K G+ K + + G+ +
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
MI+GY + G ++ L+ +M + P+ TY I++ ++ + L R +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 362 VARGLL 367
+ G+L
Sbjct: 821 ILNGIL 826
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 190/361 (52%), Gaps = 1/361 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L+R++ PDV + +I+ LC + + L +M P VTY ++++ +C
Sbjct: 223 EMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ + A+ LL+ M K +D +V T+N+L+ LC+ + + + M K+ + PN V+Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L++G+ +V A + N M+ G+SP+ ++ +I+G EA K+ M +
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + + Y L+DGLCK A M G ITY ++D LCK+ +D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ L+ E+ GI PD+ TY+ LI+G CKVGR K A+EI I G + Y+ +I
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
C+ G EA+ + M G D T+ +++ +L + G+ + E+ +R M + G+L
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 369 N 369
N
Sbjct: 582 N 582
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 180/351 (51%), Gaps = 4/351 (1%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
+L + +Y +I ++ ++ D+ +++ M P+ T +++ G+
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
L EM+ +++ +V TFNIL++ LC EG+ +++ + M K G P V+Y++++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
YC A ++ + M +GV DV +Y ++I+ LC+ + + + LL +M I
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ + YN+LI+G G++ A +L+NEM G P+ +T+N L+D N +A+ +
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
++ +G+ P +Y +L+DGLCK A+ + + G V YT MI+G CK
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
G DEA+ L+++M G PD VTY +I + G K +E+V R
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR----FKTAKEIVCR 503
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 180/383 (46%), Gaps = 38/383 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P V Y ++D LCK+ A Y M + +TYT +I G C G L +AV
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LLNEM +D ++ T++ L++ CK G K AK + + + G+ PN + YS+L+
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + + +A I+ M+ G + D ++ +++ LCK V EA + + M S+ I+ +T
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 196 IC-----------------------------------YNSLIDGLCKLGRISDAWKLVNE 220
+ Y SL+ GLCK G + +A K +
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
+H D + YN LL +CKS N+ KA++L E+ + I PD +TYT LI GLC+ G+
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 281 LKDAQEIFQDILIKGYNVTVQA--YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
A ++ +G NV YT ++G K G + +M++ G PD VT
Sbjct: 704 TVIAILFAKEAEARG-NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 762
Query: 339 EIIIRALFEKGENDKGEKLLREM 361
+I G+ +K LL EM
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEM 785
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 181/367 (49%), Gaps = 3/367 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A +LL L + P+ V + +ID + +A ++ M AK + P+ V+Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
L+ G C + A G M + V T+ ++D LCK G + EA + M K
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G+ P+ V+YS+L++G+C V AK+I + + G+SP+ Y+ +I C++ + E
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A ++ + M E D +N L+ LCK G++++A + + M G P+ ++++ L++
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
S KA ++ E+ G P FTY L+ GLCK G L++A++ + + V
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y ++ CK G +A++L +M +PD+ TY +I L KG+
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 359 REMVARG 365
+E ARG
Sbjct: 712 KEAEARG 718
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 185/422 (43%), Gaps = 71/422 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D VMY T++ ++CK ++ A L+ EMV + I P++ TYTSLI G C G+ A+
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 79 NEM-------------------------------ILKRMDVEVHT-----FNILVDALCK 102
E ++MD HT N ++D +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 103 EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
G +++ ++ M Q PN +Y+ L+ GY K+V+ + ++ ++ G+ PD +
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
++ G+C+ M++ K+L + D +N LI C G I+ A+ LV M
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
G D T + ++ VL ++H ++ ++ E+ QGI P+ Y LI+GLC+VG +K
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 283 DAQEIFQDIL---IKGYNV--------------------------------TVQAYTVMI 307
A + ++++ I NV T+ ++T ++
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ CK G EAL L M + G D V+Y ++I L KG+ +L EM G L
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071
Query: 368 YN 369
N
Sbjct: 1072 AN 1073
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 152/292 (52%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P++ Y ++ K K VS ++ LY ++ I P+ +T SL+ G C L+ + +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L I + ++V+ +TFN+L+ C G + A ++ VM G+ + + +++
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+++ + + M K+G+SP+ + Y +INGLC++ + A+ + +EM + KI +
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
++++ L K G+ +A L+ M P + ++ L+ + CK+ NV +A+ L +
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ G+K D+ +Y +LI GLC G + A E+++++ G+ Y +I G
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%)
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
N Y LI + G +Q ++ + M L + V+T N ++ ++ K G +
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
M+K+ + P+ +++ L++ C K+ + M K G +P + +Y +++ CK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
A +LLD M S+ + AD YN LI LC+ RI+ + L+ +M R P+ +TY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N L++ V A L+ E+ G+ P+ T+ LIDG G K+A ++F +
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
KG + +Y V+++G CK D A +M+ +G +TY +I L + G D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 354 GEKLLREMVARGL 366
LL EM G+
Sbjct: 462 AVVLLNEMSKDGI 474
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 172/352 (48%), Gaps = 3/352 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD+V +ID + + DL EM + PN TY L++G+ + + L
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+IL + + T + LV +C+ ++ + + +GV+ + +++ L+ C
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
E+N A D+ +M G+S D + +++ L + E+ +L EM + I ++
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 198 YNSLIDGLCKLGRISDAWKLVNEM-HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y LI+GLC++G I A+ + EM H+ PP+V + ++ L K D+A L++ +
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFM 995
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ P + ++T L+ CK G + +A E+ + G + + +Y V+I G C +G
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK-LLREMVARGLL 367
A L +M+ G + +A TY+ +IR L + G +L++++ARG +
Sbjct: 1056 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E+ L + +Q + P+ Y +I+ LC+ + A+ + EM+A +I P V ++++
Sbjct: 917 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G+ +A LL M+ ++ + +F L+ CK GNV EA + VM G+K
Sbjct: 977 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
+ VSY+ L+ G C ++ A +++ M G + +Y +I GL
Sbjct: 1037 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 200/369 (54%), Gaps = 4/369 (1%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE A+ + L Q KPDV+ Y +I LCK+ +A +MV + + P++ TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI G+C G +Q A ++ + + + T+ L+D LC EG A +F +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+KPN + Y++L+ G + +A + N M ++G+ P+VQ++ I++NGLCK+ V +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A L+ M S+ D +N LI G ++ +A ++++ M G PDV TYN LL+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK+ + + K + ++G P++FT+ IL++ LC+ +L +A + +++ K N
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV-TYEIIIRALFEKGENDKGEKL 357
+ +I+G+CK G D A L KME + ++ + TY III A EK EKL
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 358 LREMVARGL 366
+EMV R L
Sbjct: 625 FQEMVDRCL 633
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 196/359 (54%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L+ + ++ V P++ Y I LC+ + A + ++ + P+ +TY +LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
YG C + Q+A L +M+ + ++ + +T+N L+ CK G V+ A+ + + G
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ +Y SL+DG C E N+A +FN + +G+ P+V Y +I GL M+ EA +L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+EM + +I + +N L++GLCK+G +SDA LV M +G PD+ T+N L+
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
++ A+ ++ + D G+ PDV+TY L++GLCK + +D E ++ ++ KG +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ +++ C+ DEAL L+ +M++ PDAVT+ +I + G+ D L R+M
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 175/334 (52%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R + + PDV +T + S CK A L + M ++ N V Y +++ GF
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+ L +M+ + + + TFN L+ LCK+G+VKE + + ++K+GV PN +Y+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
+ G C E++ A + ++++G PDV +Y +I GLCK EA L +M +E
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ D+ YN+LI G CK G + A ++V + G PD TY L+D LC ++A+
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
AL E +GIKP+V Y LI GL G + +A ++ ++ KG VQ + +++NG
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
CK G +A L+ M S G PD T+ I+I
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 183/344 (53%), Gaps = 12/344 (3%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GET+ AL L L +KP+V++Y T+I L ++ +A L +EM K + P T+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
L+ G C +G + A GL+ MI K ++ TFNIL+ + ++ A + VM+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
GV P+ +Y+SL++G C + + + MV++G +P++ ++ I++ LC+ + +DE
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH-----RGTPPDVITY 233
A LL+EM ++ + D + + +LIDG CK G + A+ L +M TP TY
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP----TY 605
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N ++ + NV A L +E+ D+ + PD +TY +++DG CK G + + +++
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G+ ++ +IN C E EA +I +M G +P+AV
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 193/363 (53%), Gaps = 3/363 (0%)
Query: 6 AALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
AAL LL Q + +VV Y T++ ++ ++ Y+L+ +M+A + T+ L+
Sbjct: 164 AALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLL 223
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
C G +++ LL+++I + + + T+N+ + LC+ G + A + +++QG K
Sbjct: 224 RVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK 283
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ ++Y++L+ G C + +A+ MV G+ PD +Y +I G CK MV A ++
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+ + + D Y SLIDGLC G + A L NE +G P+VI YN L+ L
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ +A L E+ ++G+ P+V T+ IL++GLCK+G + DA + + ++ KGY +
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ ++I+GY + + AL ++ M +G PD TY ++ L + + + + + MV
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 363 ARG 365
+G
Sbjct: 524 EKG 526
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P V Y I+ L A+ +Y M + I P+ ++T + FC + A+
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LLN M + ++ V + +V +E E +F M+ GV +++ L+ C
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+V + + + + ++KRGV P++ +Y + I GLC+ +D A +++ + + D I
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+LI GLCK + +A + +M + G PD TYN L+ CK V A ++ +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
G PD FTY LIDGLC G A +F + L KG V Y +I G +G+
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
EA L ++M G +P+ T+ I++ L + G + L++ M+++G
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 167/332 (50%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
V +A +++ M P +Y +++ G QA + M + + +V++F I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+ + CK A + M QG + N V+Y +++ G+ + ++F M+ G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
VS + ++ ++ LCK V E KLLD++ ++ + YN I GLC+ G + A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
++V + +G PDVITYN L+ LCK+ +A + ++ ++G++PD +TY LI G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
CK G ++ A+ I D + G+ Y +I+G C EG + ALAL ++ G P+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ Y +I+ L +G + +L EM +GL+
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 5/306 (1%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G++Q+AV + M + V ++N ++ L G +A V+ M +G+ P+ S+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ M +C + A + N M +G +V +Y ++ G + E ++L +M +
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ +N L+ LCK G + + KL++++ RG P++ TYN + LC+ +D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ ++ + +QG KPDV TY LI GLCK + ++A+ ++ +G Y +I
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG--- 365
GYCK G+ A ++ +G +PD TY +I L +GE ++ L E + +G
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 366 --LLYN 369
+LYN
Sbjct: 390 NVILYN 395
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 3/279 (1%)
Query: 90 VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS--YSSLMDGYCLVKEVNKAKDI 147
+ T+ +++ L G + + V V M++ V + + Y M Y +V +A ++
Sbjct: 40 LSTYRSVIEKLGYYGKFEAMEEVL-VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNV 98
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
F M P V SY I++ L D+A K+ M I D + + CK
Sbjct: 99 FERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
R A +L+N M +G +V+ Y ++ + + + L ++ G+ + T
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
+ L+ LCK G +K+ +++ ++ +G + Y + I G C+ G D A+ ++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G PD +TY +I L + + + E L +MV GL
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIPPNAVTYTSL 61
E LE ++ + V PD V + T+ID CK+ + AY L+ +M A ++ + TY +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I+ F + A L EM+ + + + +T+ ++VD CK GNV MM+ G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-KMVDEAW 180
P+ + +++ C+ V +A I + MV++G+ P+ +N +C + K A
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAP 722
Query: 181 KLLDEMHSEKIIADTICYNSLIDGL 205
KL+ E +K Y L DGL
Sbjct: 723 KLVLEDLLKKSCITYYAYELLFDGL 747
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 187/351 (53%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KP+V +YT I LC+D + +A ++ M + PN TY+++I G+C G ++QA
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
GL E+++ + V F LVD CK + A+++F M+K GV PN Y+ L+ G+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +A + + M +SPDV +YTI+INGLC V EA +L +M +E+I +
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YNSLI G CK + A L +EM G P++IT++ L+D C ++ A+ L E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ +GI PDV TYT LID K +K+A ++ D+L G + + +++G+ KEG
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A+ + + V + +I L + G + + +M + G+
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 186/369 (50%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E EL+++ V P++ Y+ +ID CK V AY LY E++ + PN V + +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ GFC +L A L M+ +D ++ +N L+ CK GN+ EA + + M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P+ +Y+ L++G C+ +V +A +F M + P +Y +I+G CK +++A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
L EM + + + I +++LIDG C + I A L EM +G PDV+TY L+D
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K N+ +A+ L ++ + GI P+ T+ L+DG K GRL A + +Q+ +
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+T +I G C+ G A S M S G PD +Y +++ ++ L +
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 361 MVARGLLYN 369
M+ G+L N
Sbjct: 610 MIKTGILPN 618
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 184/341 (53%), Gaps = 1/341 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
++ R LV PDV +Y + K L S L EM + I PN YT I C
Sbjct: 190 MISRGLV-PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
++++A + M + ++T++ ++D CK GNV++A ++ ++ + PN V +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+L+DG+C +E+ A+ +F MVK GV P++ Y +I+G CK + EA LL EM S
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+ D Y LI+GLC ++++A +L +M + P TYN L+ CK +N+++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ L E+ G++P++ T++ LIDG C V +K A ++ ++ IKG V YT +I+
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+ KE EAL L S M +G P+ T+ ++ +++G
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 178/335 (53%), Gaps = 1/335 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L +L+ P+VV++ T++D CK + + A L+ MV + PN Y LI+G C
Sbjct: 294 EILVAELL-PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G + +AVGLL+EM + +V T+ IL++ LC E V EA +F M + + P++ +Y
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+SL+ GYC + +A D+ + M GV P++ +++ +I+G C ++ + A L EM
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ I+ D + Y +LID K + +A +L ++M G P+ T+ L+D K +
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
AI +E Q + +T LI+GLC+ G + A F D+ G + +Y M+
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
G+ +E + + L M +G +P+ + +++ R
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 29/237 (12%)
Query: 157 SPDVQSYTIIINGL----------CKIK--------------MVDEAWKLLDEMHSEKII 192
S D+QS++ +I+ L C IK M + L+++ S K
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFS 131
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
++ LI ++G +A + EM PD +L+ L + D
Sbjct: 132 IGV--FSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVD 186
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+ + +G+ PDV Y +L K G +++ ++ G V YT+ I C+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ +EA + M+ G +P+ TY +I + G + L +E++ LL N
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 182/318 (57%), Gaps = 1/318 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P+VV+Y TIIDSLC+ V+ A D+ M I P+ VTY SLI G +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+L++M+ + +V TF+ L+D KEG + EAK + M+++ V PN V+Y+SL++G C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +++AK + N++V +G P+ +Y +ING CK K VD+ K+L M + + DT
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+L G C+ G+ S A K++ M G PD+ T+N LLD LC + KA+ ++++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
Q + TY I+I GLCK +++DA +F + +KG + V Y M+ G ++ L
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 317 DEALALISKMESS-GRMP 333
EA L KM+ G MP
Sbjct: 481 REAHELYRKMQKEDGLMP 498
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 7/362 (1%)
Query: 5 SAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
S AL L + + +P +V + ++++ C +A L ++V PN V Y ++
Sbjct: 131 SLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
I C GQ+ A+ +L M K+M + +V T+N L+ L G + + + MM+
Sbjct: 191 IDSLCEKGQVNTALDVLKHM--KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G+ P+ +++S+L+D Y ++ +AK +N M++R V+P++ +Y +INGLC ++DEA
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K+L+ + S+ + + YN+LI+G CK R+ D K++ M G D TYN L
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C++ A ++ + G+ PD++T+ IL+DGLC G++ A +D+ V
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ Y ++I G CK ++A L + G PD +TY ++ L K + +L R
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
Query: 360 EM 361
+M
Sbjct: 489 KM 490
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 190/351 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D+ +TT+ID C+ +S A +M+ P+ VT+ SL+ GFC V + +A+
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+++++ + V +N ++D+LC++G V A +V M K G++P+ V+Y+SL+
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ I + M++ G+SPDV +++ +I+ K + EA K +EM + +
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YNSLI+GLC G + +A K++N + +G P+ +TYN L++ CK+ VD + ++
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ G+ D FTY L G C+ G+ A+++ ++ G + + + ++++G C G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+AL + ++ S + +TY III+ L + + + L + +G+
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 168/330 (50%)
Query: 37 SDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNIL 96
+DA L+ +M P+ V ++ L+ + + + + L + + + ++++F L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
+D C+ + A + MMK G +P+ V++ SL++G+C V +A + + +V G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
P+V Y II+ LC+ V+ A +L M I D + YNSLI L G + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
++++M G PDVIT++ L+DV K + +A E+ + + P++ TY LI+GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
G L +A+++ ++ KG+ Y +INGYCK D+ + ++ M G D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARGL 366
TY + + + G+ EK+L MV+ G+
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 144/263 (54%), Gaps = 1/263 (0%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G ++ L + R + PDV+ ++ +ID K+ + +A Y+EM+ + + PN VTY SL
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G CI G L +A +LN ++ K T+N L++ CK V + + VM + GV
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+T +Y++L GYC + + A+ + MV GV PD+ ++ I+++GLC + +A
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
L+++ K + I YN +I GLCK ++ DAW L + +G PDVITY ++ L
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 242 KSHNVDKAIALIKEIQDQ-GIKP 263
+ +A L +++Q + G+ P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 170/342 (49%), Gaps = 2/342 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +V ++ ++ ++ K L+ + I + ++T+LI FC +L A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M+ + + TF LV+ C EA ++ ++ G +PN V Y++++D C
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+VN A D+ M K G+ PDV +Y +I L + ++L +M I D I
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+++LID K G++ +A K NEM R P+++TYN L++ LC +D+A ++ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G P+ TY LI+G CK R+ D +I + G + Y + GYC+ G
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
A ++ +M S G PD T+ I++ L + G+ G+ L+R
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK--IGKALVR 416
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%)
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
+A +F M + P+ V +S L+ + + +F + G+S D+ S+T +I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
+ C+ + A L +M + + SL++G C + R +A LV+++ G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
P+V+ YN ++D LC+ V+ A+ ++K ++ GI+PDV TY LI L G + I
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
D++ G + V ++ +I+ Y KEG EA ++M P+ VTY +I L
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 348 KGENDKGEKLLREMVARGLLYN 369
G D+ +K+L +V++G N
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPN 323
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%)
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
+ +DA L +M P ++ ++ LL + K + + I+L + ++ GI D++++T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
LID C+ RL A ++ G+ ++ + ++NG+C EA++L+ ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G P+ V Y II +L EKG+ + +L+ M G+
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 203/401 (50%), Gaps = 35/401 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E A E + ++ PD + + ++ID L K V DAY +Y +M+ N++ YTS
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 61 LIYGF---------------------------------CI--VGQLQQAVGLLNEMILKR 85
LI F C+ G+ ++ + E+ +R
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+ +++IL+ L K G E +F M +QG +T +Y+ ++DG+C +VNKA
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+ M +G P V +Y +I+GL KI +DEA+ L +E S++I + + Y+SLIDG
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K+GRI +A+ ++ E+ +G P++ T+N LLD L K+ +++A+ + +++ P+
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
TY ILI+GLCKV + A +Q++ +G + +YT MI+G K G EA AL +
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+++G +PD+ Y +I L L E RGL
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 187/368 (50%), Gaps = 3/368 (0%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A EL +++ + P+V ++D LCK + + +A ++ EM K P+ +T+
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI G VG++ A + +M+ + L+ G ++ ++ M+
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
Q P+ ++ MD E K + +F + R PD +SY+I+I+GL K +E
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++L M + + DT YN +IDG CK G+++ A++L+ EM +G P V+TY ++D
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L K +D+A L +E + + I+ +V Y+ LIDG KVGR+ +A I ++++ KG
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ + +++ K +EAL M+ P+ VTY I+I L + + +K
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 359 REMVARGL 366
+EM +G+
Sbjct: 751 QEMQKQGM 758
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 34/388 (8%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPD V YT++I LCK + +A +++ + R P Y ++I G+ G+ +A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 76 GLLN----------------------------------EMILKRMDVEVHTFNILVDALC 101
LL E + K + T+NIL+D LC
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLC 388
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
+ G + A + M K G+ PN + + ++D C +++++A +F M + +PD
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
++ +I+GL K+ VD+A+K+ ++M ++I Y SLI GR D K+ +M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
++ PD+ N +D + K+ +K A+ +EI+ + PD +Y+ILI GL K G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ E+F + +G + +AY ++I+G+CK G ++A L+ +M++ G P VTY +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 342 IRALFEKGENDKGEKLLREMVARGLLYN 369
I L + D+ L E ++ + N
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 36/392 (9%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
++++R+ +P YTT+I + L+ +M P +T+LI GF
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G++ A+ LL+EM +D ++ +N+ +D+ K G V A F + G+KP+ V+
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVK---------------------------------- 153
Y+S++ C +++A ++F + K
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 154 -RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+G P V +Y I+ L K+ VDEA K+ +EM + + YN LID LC+ G++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLD 394
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A++L + M G P+V T N ++D LCKS +D+A A+ +E+ + PD T+ LI
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
DGL KVGR+ DA ++++ +L YT +I + G ++ + M +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
PD + +F+ GE +KG + E+ AR
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 176/352 (50%), Gaps = 2/352 (0%)
Query: 1 MGETSAALELLR--RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
MG+ AL++ ++ P++ Y +ID LC+ + A++L M + PN T
Sbjct: 356 MGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
++ C +L +A + EM K + TF L+D L K G V +A V+ M+
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ N++ Y+SL+ + I+ M+ + SPD+Q ++ + K ++
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
+ +E+ + + + D Y+ LI GL K G ++ ++L M +G D YN ++D
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
CK V+KA L++E++ +G +P V TY +IDGL K+ RL +A +F++ K +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
V Y+ +I+G+ K G DEA ++ ++ G P+ T+ ++ AL + E
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 141/253 (55%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE ++ + +P VV Y ++ID L K + +AY L+ E +KRI N V Y+SLI GF
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
VG++ +A +L E++ K + ++T+N L+DAL K + EA F M + PN V+
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y L++G C V++ NKA + M K+G+ P SYT +I+GL K + EA L D
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + D+ CYN++I+GL R DA+ L E RG P T LLD L K+ ++
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLE 849
Query: 248 KAIALIKEIQDQG 260
+A + +++ G
Sbjct: 850 QAAIVGAVLRETG 862
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 1/345 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V ++ K + + YD+ M + P YT+LI F V + L
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M + VH F L+ KEG V A ++ M + + V Y+ +D +
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V +V+ A F+ + G+ PD +YT +I LCK +DEA ++ + + + + T
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++I G G+ +A+ L+ +G+ P VI YN +L L K VD+A+ + +E++
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
P++ TY ILID LC+ G+L A E+ + G V+ +M++ CK D
Sbjct: 371 KDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
EA A+ +M+ PD +T+ +I L + G D K+ +M+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 144/282 (51%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
ET ++ Q D Y +ID CK V+ AY L EM K P VTY S+I
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G + +L +A L E KR+++ V ++ L+D K G + EA + +M++G+
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN +++SL+D +E+N+A F M + +P+ +Y I+INGLCK++ ++A+
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
EM + + TI Y ++I GL K G I++A L + G PD YN +++ L
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
+ A +L +E + +G+ T +L+D L K L+ A
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 165/331 (49%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A E ++ + PD Y+ +I L K ++ Y+L+ M + + Y +I GF
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
C G++ +A LL EM K + V T+ ++D L K + EA +F + ++ N
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V YSSL+DG+ V +++A I ++++G++P++ ++ +++ L K + ++EA
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M K + + Y LI+GLCK+ + + A+ EM +G P I+Y ++ L K+ N
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ +A AL + G PD Y +I+GL R DA +F++ +G + + V
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAV 336
+++ K ++A + + + +G+ A
Sbjct: 838 LLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 148/319 (46%), Gaps = 1/319 (0%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
+P +Y SL+ +L EM + V+T +V K ++E
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY 153
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
+V +M K +P +Y++L+ + V + +F M + G P V +T +I G
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
K VD A LLDEM S + AD + YN ID K+G++ AWK +E+ G PD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD 290
+TY ++ VLCK++ +D+A+ + + ++ P + Y +I G G+ +A + +
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 291 ILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
KG +V AY ++ K G DEAL + +M+ P+ TY I+I L G+
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGK 392
Query: 351 NDKGEKLLREMVARGLLYN 369
D +L M GL N
Sbjct: 393 LDTAFELRDSMQKAGLFPN 411
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 185/319 (57%), Gaps = 2/319 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD V+YT +I C+ ++S A +L +EM+ + + VTY ++++G C L +A L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
NEM + + + +T IL+D CK GN++ A +F M ++ ++ + V+Y++L+DG+
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V +++ AK+I+ MV + + P SY+I++N LC + EA+++ DEM S+ I +
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
NS+I G C+ G SD + +M G PD I+YN L+ + N+ KA L+K+++
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 258 DQ--GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ G+ PDVFTY ++ G C+ ++K+A+ + + ++ +G N YT MING+ +
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 316 CDEALALISKMESSGRMPD 334
EA + +M G PD
Sbjct: 708 LTEAFRIHDEMLQRGFSPD 726
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 196/356 (55%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ R V +V ++++LCKD + S++ K + P+ VTY +LI + G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+++A L+N M K V+T+N +++ LCK G + AK VFA M++ G+ P++ +Y S
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ C +V + + +F+ M R V PD+ ++ +++ + +D+A + +
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+I D + Y LI G C+ G IS A L NEM +G DV+TYN +L LCK + +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L E+ ++ + PD +T TILIDG CK+G L++A E+FQ + K + V Y +++G+
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
K G D A + + M S +P ++Y I++ AL KG + ++ EM+++ +
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 194/367 (52%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M + L ++ + V PD+V Y T+I + L+ +A++L + M K P TY +
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I G C G+ ++A + EM+ + + T+ L+ CK+G+V E + VF+ M +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V P+ V +SS+M + ++KA FN + + G+ PD YTI+I G C+ M+ A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
L +EM + D + YN+++ GLCK + +A KL NEM R PD T L+D
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
CK N+ A+ L ++++++ I+ DV TY L+DG KVG + A+EI+ D++ K T
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+Y++++N C +G EA + +M S P + +I+ G GE L +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 361 MVARGLL 367
M++ G +
Sbjct: 611 MISEGFV 617
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 181/340 (53%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
++ +I + + + + +A++ ++ + +K + +LI +G ++ A G+ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ + V+T NI+V+ALCK+G +++ + + ++GV P+ V+Y++L+ Y +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+A ++ N M +G SP V +Y +INGLCK + A ++ EM + D+ Y SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ CK G + + K+ ++M R PD++ ++ ++ + +S N+DKA+ +++ G+
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
PD YTILI G C+ G + A + ++L +G + V Y +++G CK + EA
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
L ++M PD+ T I+I + G +L ++M
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 40/303 (13%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S A+ L + +Q DVV Y TI+ LCK K++ +A L++EM + + P++ T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFN------------------------ 94
T LI G C +G LQ A+ L +M KR+ ++V T+N
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 95 -----------ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
ILV+ALC +G++ EA V+ M+ + +KP + +S++ GYC +
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK--IIADTICYNSL 201
+ M+ G PD SY +I G + + + +A+ L+ +M E+ ++ D YNS+
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ G C+ ++ +A ++ +M RG PD TY +++ N+ +A + E+ +G
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 262 KPD 264
PD
Sbjct: 724 SPD 726
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 118/244 (48%)
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
N + L+ Y +++ +A + F L+ +G + + + +I L +I V+ AW +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
E+ + + N +++ LCK G++ ++++ +G PD++TYN L+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
+++A L+ + +G P V+TY +I+GLCK G+ + A+E+F ++L G + Y
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
++ CK+G E + S M S +PD V + ++ G DK +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 364 RGLL 367
GL+
Sbjct: 404 AGLI 407
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 198/370 (53%), Gaps = 4/370 (1%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G+ LE R +KP+VV Y+T++D+ CK+ ++ A Y +M + PN T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
YTSLI C +G L A L NEM+ ++ V T+ L+D LC +KEA+ +F M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
GV PN SY++L+ G+ K +++A ++ N + RG+ PD+ Y I GLC ++ ++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
A +++EM I A+++ Y +L+D K G ++ L++EM V+T+ L+
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 238 DVLCKSHNVDKAIALIKEI-QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
D LCK+ V KA+ I D G++ + +T +IDGLCK +++ A +F+ ++ KG
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
AYT +++G K+G EALAL KM G D + Y ++ L + K
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 357 LLREMVARGL 366
L EM+ G+
Sbjct: 705 FLEEMIGEGI 714
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 186/350 (53%), Gaps = 1/350 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ +T E ++ +PDV+ Y +I+ CK + + Y EM + PN V+Y++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ FC G +QQA+ +M + +T+ L+DA CK GN+ +A + M++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V+ N V+Y++L+DG C + + +A+++F M GV P++ SY +I+G K K +D A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+LL+E+ I D + Y + I GLC L +I A ++NEM G + + Y L+D
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK-GYNVT 299
KS N + + L+ E+++ I+ V T+ +LIDGLCK + A + F I G
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
+T MI+G CK+ + A L +M G +PD Y ++ F++G
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 179/330 (54%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+P V Y +ID +CK+ V A L+ EM + + P+ VTY S+I GF VG+L V
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
EM + +V T+N L++ CK G + + M G+KPN VSYS+L+D +
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +A + M + G+ P+ +YT +I+ CKI + +A++L +EM + +
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ Y +LIDGLC R+ +A +L +M G P++ +YN L+ K+ N+D+A+ L+ E
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ +GIKPD+ Y I GLC + +++ A+ + ++ G YT +++ Y K G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRAL 345
E L L+ +M+ VT+ ++I L
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 191/370 (51%), Gaps = 4/370 (1%)
Query: 2 GETSAA---LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AA E ++ + + PD V Y ++ID K + D + EM P+ +TY
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI FC G+L + EM + V +++ LVDA CKEG +++A + M +
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G+ PN +Y+SL+D C + ++ A + N M++ GV +V +YT +I+GLC + + E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +L +M + +I + YN+LI G K + A +L+NE+ RG PD++ Y +
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC ++ A ++ E+++ GIK + YT L+D K G + + ++ V
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESS-GRMPDAVTYEIIIRALFEKGENDKGEKL 357
TV + V+I+G CK L +A+ +++ + G +A + +I L + + + L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 358 LREMVARGLL 367
+MV +GL+
Sbjct: 636 FEQMVQKGLV 645
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 178/357 (49%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R + P ++ + L ++ +A +S+M R+ P + L++ F +G+
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+MI V T+NI++D +CKEG+V+ A+ +F M +G+ P+TV+Y+S++
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
DG+ V ++ F M PDV +Y +IN CK + + EM +
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+ + Y++L+D CK G + A K +M G P+ TY L+D CK N+ A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
E+ G++ +V TYT LIDGLC R+K+A+E+F + G + +Y +I+G+ K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
D AL L+++++ G PD + Y I L + + + ++ EM G+ N
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 43/252 (17%)
Query: 7 ALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
ALELL + + +KPD+++Y T I LC + + A + +EM I N++ YT+L+
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHT------------------------------- 92
+ G + + LL+EM K +D+EV
Sbjct: 551 AYFKSGNPTEGLHLLDEM--KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 93 -------FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
F ++D LCK+ V+ A +F M+++G+ P+ +Y+SLMDG V +A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+ + M + G+ D+ +YT ++ GL + +A L+EM E I D + S++
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Query: 206 CKLGRISDAWKL 217
+LG I +A +L
Sbjct: 729 YELGCIDEAVEL 740
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAK-RIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
VV + +ID LCK+KLVS A D ++ + + NA +T++I G C Q++ A L
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+M+ K + + + L+D K+GNV EA + M + G+K + ++Y+SL+ G
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
++ KA+ M+ G+ PD ++ ++ +DEA +L + +++
Sbjct: 697 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 751
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 195/375 (52%), Gaps = 32/375 (8%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDL-YSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
V PD ++ ++I + LV D L YS+M+A + P+ LI+ FC VG+L A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ LL ++ ++ T+N ++ LC+ G EA + M+K G+ P+TVSY++L+DG
Sbjct: 149 ISLLRNRVI---SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 135 YCLVKEVNKAKDI-------------------FNL---------MVKRGVSPDVQSYTII 166
+C V +AK + +NL MV G PDV +++ I
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
IN LCK V E LL EM + + + Y +L+D L K A L ++M RG
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
P D++ Y L+D L K+ ++ +A K + + P+V TYT L+DGLCK G L A+
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
I +L K V Y+ MINGY K+G+ +EA++L+ KME +P+ TY +I LF
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 347 EKGENDKGEKLLREM 361
+ G+ + +L +EM
Sbjct: 446 KAGKEEMAIELSKEM 460
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 203/397 (51%), Gaps = 28/397 (7%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G S A+ LLR +++ D V Y T+I LC+ L +AY SEMV I P+ V+Y +
Sbjct: 142 VGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 61 LIYGFCIVGQLQQAVGLLNE----------------------------MILKRMDVEVHT 92
LI GFC VG +A L++E M++ D +V T
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
F+ +++ LCK G V E + M + V PN V+Y++L+D A +++ MV
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
RG+ D+ YT++++GL K + EA K + + + + + Y +L+DGLCK G +S
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A ++ +M + P+V+TY+ +++ K +++A++L+++++DQ + P+ FTY +I
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
DGL K G+ + A E+ +++ + G ++N + G E L+ M S G
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
D + Y +I F+ G+ + EM RG+ ++
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD 538
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 201/380 (52%), Gaps = 36/380 (9%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PDVV +++II+ LCK V + L EM + PN VTYT+L+ + A+ L
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
++M+++ + V++ + +L+D L K G+++EA+ F ++++ PN V+Y++L+DG C
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+++ A+ I M+++ V P+V +Y+ +ING K M++EA LL +M + ++ +
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 198 YNSLIDGLCK-----------------------------------LGRISDAWKLVNEMH 222
Y ++IDGL K +GRI + LV +M
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+G D I Y L+DV K + + A+A +E+Q++G+ DV +Y +LI G+ K G++
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV- 555
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A ++ + KG + + +M+N K+G + L L KM+S G P ++ I++
Sbjct: 556 GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Query: 343 RALFEKGENDKGEKLLREMV 362
L E G+ ++ +L +M+
Sbjct: 616 GMLCENGKMEEAIHILNQMM 635
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 1/354 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V D + YT++ID K A EM + +P + V+Y LI G G++ A
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-AD 558
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
M K ++ ++ TFNI++++ K+G+ + ++ M G+KP+ +S + ++
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGML 618
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C ++ +A I N M+ + P++ +Y I ++ K K D +K + + S I
Sbjct: 619 CENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSR 678
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YN+LI LCKLG A ++ +M RG PD +T+N L+ +V KA++
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + GI P+V TY +I GL G +K+ + ++ +G Y +I+G K G
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ + +M + G +P TY ++I G+ + +LL+EM RG+ N
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 167/369 (45%), Gaps = 17/369 (4%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
A + +R + ++PD+ + +++S K L+ +M + I P+ ++ ++ C
Sbjct: 560 AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
G++++A+ +LN+M+L + + T+ I +D K ++ G+K +
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ 679
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
Y++L+ C + KA + M RG PD ++ +++G V +A M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
I + YN++I GL G I + K ++EM RG PD TYN L+ K N+
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
++ + E+ G+ P TY +LI VG++ A+E+ +++ +G + Y M
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 307 INGYCKEGLCD--------------EALALISKM-ESSGRMPDAVTYEIIIRALFEKGEN 351
I+G CK LC EA L+ +M E G +P T I A + G
Sbjct: 860 ISGLCK--LCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMK 917
Query: 352 DKGEKLLRE 360
E+ L+E
Sbjct: 918 VDAERFLKE 926
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 150/308 (48%), Gaps = 22/308 (7%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A+ +L + + + P++ Y +D+ K K + + +++ I + Y
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI C +G ++A ++ +M + + TFN L+ +V++A + ++VMM+
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 119 QGVKPNTVSYSSLMDGYC---LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
G+ PN +Y++++ G L+KEV+K + M RG+ PD +Y +I+G KI
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKW---LSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+ + + EM ++ ++ T YN LI +G++ A +L+ EM RG P+ TY
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 236 LLDVLCK--SHN----------VDKAIALIKE-IQDQGIKPDVFTYTILIDGLCKVGRLK 282
++ LCK +H + +A L+KE ++++G P T + K G
Sbjct: 859 MISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKV 918
Query: 283 DAQEIFQD 290
DA+ ++
Sbjct: 919 DAERFLKE 926
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 191/379 (50%), Gaps = 19/379 (5%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A ++R + + PD Y+ +++ LC + A+ L+ EM + + TY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T ++ FC G ++QA NEM V T+ L+ A K V A +F M+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ----------------S 162
+G PN V+YS+L+DG+C +V KA IF M PDV +
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y +++G CK V+EA KLLD M E + I Y++LIDGLCK+G++ +A ++ EM
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
G P + TY+ L+D K D A ++ ++ + P+V YT +IDGLCKVG+
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+A ++ Q + KG V YT MI+G+ G + L L+ +M S G P+ VTY ++I
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 343 RALFEKGENDKGEKLLREM 361
+ G D LL EM
Sbjct: 822 DHCCKNGALDVAHNLLEEM 840
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 211/429 (49%), Gaps = 62/429 (14%)
Query: 2 GETSAALELLRRQLVK----PDVVMYTTIIDSLC--KDKLVSDAYDL----YSEMVAKRI 51
G+ S A +LL++ +VK P V+Y +I S+C KD L D DL YSEM+A +
Sbjct: 386 GDHSYAYKLLKK-MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 52 PPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI----------------------------- 82
N + +S C G+ ++A ++ EMI
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 83 ----LKR--MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+KR + +V+T+ I+VD+ CK G +++A+ F M + G PN V+Y++L+ Y
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT- 195
K+V+ A ++F M+ G P++ +Y+ +I+G CK V++A ++ + M K + D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 196 ---------------ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ Y +L+DG CK R+ +A KL++ M G P+ I Y+ L+D L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
CK +D+A + E+ + G ++TY+ LID KV R A ++ +L V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
YT MI+G CK G DEA L+ ME G P+ VTY +I G+ + +LL
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 361 MVARGLLYN 369
M ++G+ N
Sbjct: 805 MGSKGVAPN 813
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 190/423 (44%), Gaps = 57/423 (13%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ AL L+ + PD V YT +I LC+ L +A D + M A PN VTY++
Sbjct: 283 VGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN--------------- 105
L+ G QL + +LN M+++ FN LV A C G+
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 106 --------------------------VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
+ A+ ++ M+ GV N ++ SS C
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ KA + M+ +G PD +Y+ ++N LC ++ A+ L +EM ++AD Y
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
++D CK G I A K NEM G P+V+TY L+ K+ V A L + + +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQ-----------DILIKGYN-----VTVQAY 303
G P++ TY+ LIDG CK G+++ A +IF+ D+ K Y+ V Y
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
+++G+CK +EA L+ M G P+ + Y+ +I L + G+ D+ +++ EM
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 364 RGL 366
G
Sbjct: 703 HGF 705
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 188/404 (46%), Gaps = 58/404 (14%)
Query: 3 ETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMV-AKRIP------ 52
+ S A EL L + P++V Y+ +ID CK V A ++ M +K +P
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 53 ---------PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKE 103
PN VTY +L+ GFC ++++A LL+ M ++ + ++ L+D LCK
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G + EA+ V M + G +YSSL+D Y VK + A + + M++ +P+V Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
T +I+GLCK+ DEA+KL+ M + + + Y ++IDG +G+I +L+ M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 224 RGTPPDVITYNPLLDVLCKSHNVD---------------------------------KAI 250
+G P+ +TY L+D CK+ +D +++
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV----QAYTVM 306
L+ EI P + Y +LID L K RL+ A + +++ ++ T+ Y +
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSL 925
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
I C + A L S+M G +P+ ++ +I+ LF +
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 38/349 (10%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P+VV Y ++D CK V +A L M + PN + Y +LI G C VG+L +A
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ EM ++T++ L+D K A V + M++ PN V Y+ ++DG C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V + ++A + +M ++G P+V +YT +I+G I ++ +LL+ M S+ + + +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEM-------HHRG------------------------ 225
Y LID CK G + A L+ EM H G
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 226 --TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ--DQGIKPDVFTYTILIDGLCKVGRL 281
T P + Y L+D L K+ ++ A+ L++E+ + TY LI+ LC ++
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL---ISKME 327
+ A ++F ++ KG +Q++ +I G + EAL L IS ME
Sbjct: 936 ETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 171/377 (45%), Gaps = 12/377 (3%)
Query: 2 GETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S ALE L R +P Y +I + K + A ++ EM + + T
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
Y C VG+ ++A+ L+ + + + L+ LC+ +EA + M
Sbjct: 274 RCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
PN V+YS+L+ G K++ + K + N+M+ G P + + +++ C
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLC------KLGRISDAWKLVNEMHHRGTPPDVIT 232
A+KLL +M + + YN LI +C + A K +EM G + I
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 233 YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ LC + +KA ++I+E+ QG PD TY+ +++ LC +++ A +F+++
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 293 IKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
G V YT+M++ +CK GL ++A ++M G P+ VTY +I A + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 353 KGEKLLREMVARGLLYN 369
+L M++ G L N
Sbjct: 571 YANELFETMLSEGCLPN 587
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 135/247 (54%), Gaps = 4/247 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+VV+YT +ID LCK +AY L M K PN VTYT++I GF ++G+++ + L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L M K + T+ +L+D CK G + A N+ M + +T Y +++G+
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-- 859
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM--HSEKIIADT 195
KE ++ + + + + +P + Y ++I+ L K + ++ A +LL+E+ S ++ +
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YNSLI+ LC ++ A++L +EM +G P++ ++ L+ L ++ + +A+ L+
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 979
Query: 256 IQDQGIK 262
I I+
Sbjct: 980 ISHMEIQ 986
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 44/315 (13%)
Query: 94 NILVDALCKEGN---------------VKEAKNVFAVMMKQGVKPNTVSYSSL------- 131
N+LV C+ G+ + +++ + +++ +K + + +SL
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 132 ----MDGYCL------VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
MDG+ L + +V K ++ L+ PD YT +I+GLC+ + +EA
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
L+ M + + + + Y++L+ G ++ +++N M G P +N L+ C
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC------KVGRLKDAQEIFQDILIKG 295
S + A L+K++ G P Y ILI +C L A++ + ++L G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 296 Y---NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
+ V ++T + C G ++A ++I +M G +PD TY ++ L + +
Sbjct: 444 VVLNKINVSSFTRCL---CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 353 KGEKLLREMVARGLL 367
L EM GL+
Sbjct: 501 LAFLLFEEMKRGGLV 515
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ LELL R + V P+ V Y +ID CK+ + A++L EM P +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF--AV 115
Y +I GF + +++GLL+E+ + + +L+D L K ++ A +
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+ + +Y+SL++ CL +V A +F+ M K+GV P++QS+ +I GL +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Query: 176 VDEAWKLLD 184
+ EA LLD
Sbjct: 970 ISEALLLLD 978
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 162/260 (62%), Gaps = 3/260 (1%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
MG+T +AL LL + +K VV+Y IID LCKD A +L++EM K I P+ +T
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y+ +I FC G+ A LL +MI ++++ +V TF+ L++AL KEG V EA+ ++ M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
++G+ P T++Y+S++DG+C +N AK + + M + SPDV +++ +ING CK K VD
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
++ EMH I+A+T+ Y +LI G C++G + A L+N M G P+ IT+ +L
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 238 DVLCKSHNVDKAIALIKEIQ 257
LC + KA A+++++Q
Sbjct: 294 ASLCSKKELRKAFAILEDLQ 313
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 174/313 (55%), Gaps = 4/313 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDVV +TT+++ LC + V A L MV + P Y ++I G C +G + A+
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL++M + V +N ++D LCK+G+ A+N+F M +G+ P+ ++YS ++D +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
A+ + M++R ++PDV +++ +IN L K V EA ++ +M I TI
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YNS+IDG CK R++DA ++++ M + PDV+T++ L++ CK+ VD + + E+
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+GI + TYT LI G C+VG L AQ++ ++ G + M+ C +
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 317 DEALALISKMESS 329
+A A++ ++ S
Sbjct: 303 RKAFAILEDLQKS 315
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 179/317 (56%), Gaps = 6/317 (1%)
Query: 46 MVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHT-FNILVDALCKEG 104
MV P+ VT+T+L+ G C G++ QA+ L++ M+ E H + +++ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMV-----EEGHQPYGTIINGLCKMG 55
Query: 105 NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
+ + A N+ + M + +K + V Y++++D C A+++F M +G+ PDV +Y+
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
+I+ C+ +A +LL +M +I D + +++LI+ L K G++S+A ++ +M R
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 225 GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
G P ITYN ++D CK ++ A ++ + + PDV T++ LI+G CK R+ +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
EIF ++ +G YT +I+G+C+ G D A L++ M SSG P+ +T++ ++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 345 LFEKGENDKGEKLLREM 361
L K E K +L ++
Sbjct: 296 LCSKKELRKAFAILEDL 312
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 145/254 (57%), Gaps = 4/254 (1%)
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M++ G +P+ V++++LM+G C V +A + + MV+ G P Y IINGLCK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+ A LL +M I A + YN++ID LCK G A L EMH +G PDVITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++D C+S A L++++ ++ I PDV T++ LI+ L K G++ +A+EI+ D+L +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
T Y MI+G+CK+ ++A ++ M S PD VT+ +I + D G
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 356 KLLREMVARGLLYN 369
++ EM RG++ N
Sbjct: 237 EIFCEMHRRGIVAN 250
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 89 EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF 148
+V TF L++ LC EG V +A + M+++G +P Y ++++G C + + A ++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 149 NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
+ M + + V Y II+ LCK A L EMH + I D I Y+ +ID C+
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
GR +DA +L+ +M R PDV+T++ L++ L K V +A + ++ +GI P TY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+IDG CK RL DA+ + + K + V ++ +INGYCK D + + +M
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G + + VTY +I + G+ D + LL M++ G+ N
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 116/192 (60%), Gaps = 3/192 (1%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G + A +LLR + + PDVV ++ +I++L K+ VS+A ++Y +M+ + I P +TY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
S+I GFC +L A +L+ M K +V TF+ L++ CK V +F M +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ NTV+Y++L+ G+C V +++ A+D+ N+M+ GV+P+ ++ ++ LC K + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 179 AWKLLDEMHSEK 190
A+ +L+++ +
Sbjct: 305 AFAILEDLQKSE 316
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 200/380 (52%), Gaps = 30/380 (7%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+VV Y+T ID+ CK + A + M + PN VT+T LI G+C G L+ AV L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM RM + V T+ L+D CK+G ++ A+ +++ M++ V+PN++ Y++++DG+
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ + A M+ +G+ D+ +Y +II+GLC + EA +++++M ++ D +
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT------------------------- 232
+ ++++ K GR+ A + +++ RG PDV+
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 233 -----YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
Y L+D LCK + + L +I + G+ PD F YT I GLCK G L DA ++
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
++ +G + + AYT +I G +GL EA + +M +SG PD+ ++++IRA +
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 348 KGENDKGEKLLREMVARGLL 367
+G LL +M RGL+
Sbjct: 521 EGNMAAASDLLLDMQRRGLV 540
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 197/368 (53%), Gaps = 9/368 (2%)
Query: 3 ETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
S LE LR + KPD+V + ++ + K K++ + + +Y ++ K PN VTY+
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYS 167
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+ I FC G+LQ A+ + M + V TF L+D CK G+++ A +++ M +
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
+ N V+Y++L+DG+C E+ +A+++++ MV+ V P+ YT II+G + D A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K L +M ++ + D Y +I GLC G++ +A ++V +M PD++ + +++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
KS + A+ + ++ ++G +PDV + +IDG+ K G+L +A F + K +V
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDVM 405
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
YTV+I+ CKEG E L SK+ +G +PD Y I L ++G KL
Sbjct: 406 ---YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 360 EMVARGLL 367
MV GLL
Sbjct: 463 RMVQEGLL 470
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 175/362 (48%), Gaps = 4/362 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L LR+ PD I L + + +V++ P+ ++ S++ C
Sbjct: 9 LSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCK 68
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF-AVMMKQGV--KPN 124
+GQ++ A +++ M + +V ++N L+D C+ G+++ A V ++ G KP+
Sbjct: 69 LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPD 128
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
VS++SL +G+ +K +++ +M+K SP+V +Y+ I+ CK + A K
Sbjct: 129 IVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M + + + + + LIDG CK G + A L EM +V+TY L+D CK
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
+ +A + + + ++P+ YT +IDG + G +A + +L +G + + AY
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
V+I+G C G EA ++ ME S +PD V + ++ A F+ G + +++ R
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 365 GL 366
G
Sbjct: 368 GF 369
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%), Gaps = 5/223 (2%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E + +E + + + PD+V++TT++++ K + A ++Y +++ + P+ V +++I
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G GQL +A+ I K DV + +L+DALCKEG+ E + +F+ + + G+
Sbjct: 381 DGIAKNGQLHEAIVYF--CIEKANDV---MYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ Y+S + G C + A + MV+ G+ D+ +YT +I GL ++ EA ++
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
DEM + I D+ ++ LI K G ++ A L+ +M RG
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
K + VMYT +ID+LCK+ + L+S++ + P+ YTS I G C G L A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L M+ + + +++ + L+ L +G + EA+ VF M+ G+ P++ + L+ Y
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 137 LVKEVNKAKDIFNLMVKRGV 156
+ A D+ M +RG+
Sbjct: 520 KEGNMAAASDLLLDMQRRGL 539
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 187/325 (57%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+K DVV+ T +ID+LCK++LV A ++ M + I PN VTY+SLI G C G+L A
Sbjct: 44 IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+EM K+++ V TF+ L+DA K G + + +V+ +M++ + PN +YSSL+ G
Sbjct: 104 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 163
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C+ V++A + +LM+ +G +P+V +Y+ + NG K VD+ KLLD+M + A+T
Sbjct: 164 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 223
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ N+LI G + G+I A + M G P++ +YN +L L + V+KA++ +
Sbjct: 224 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 283
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+Q D+ TYTI+I G+CK +K+A ++F + K +AYT+MI + G+
Sbjct: 284 MQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGM 343
Query: 316 CDEALALISKMESSGRMPDAVTYEI 340
EA AL + R ++ E+
Sbjct: 344 RTEADALNRFYQKHVRQNESAPAEV 368
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 41/353 (11%)
Query: 45 EMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV---GLLNEMILKRMDVEVHTFNILVDALC 101
+M+ I P+ VT +SL+ GFC+ ++ AV G + +M +KR DV V T IL+D LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKR-DVVVDT--ILIDTLC 59
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL---------------VKEVN---- 142
K V A V M +G+ PN V+YSSL+ G C K++N
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 143 ----------------KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
K ++ +M++ + P+V +Y+ +I GLC VDEA K+LD M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
S+ + + Y++L +G K R+ D KL+++M RG + ++ N L+ ++ +
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
D A+ + + G+ P++ +Y I++ GL G ++ A F+ + ++ + YT+M
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
I+G CK + EA L K++ PD Y I+I L G + + L R
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 141/254 (55%)
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
MMK G++P+ V+ SSL++G+CL + A + M K G+ DV TI+I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
V A ++L M I + + Y+SLI GLCK GR++DA + ++EM + P+VIT++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+D K + K ++ K + I P+VFTY+ LI GLC R+ +A ++ ++ KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
V Y+ + NG+ K D+ + L+ M G + V+ +I+ F+ G+ D
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 356 KLLREMVARGLLYN 369
+ M + GL+ N
Sbjct: 244 GVFGYMTSNGLIPN 257
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 144/273 (52%)
Query: 89 EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF 148
++ T + LV+ C ++K+A V M K G+K + V + L+D C + V A ++
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 149 NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
M RG+SP+V +Y+ +I GLCK + +A + L EM S+KI + I +++LID K
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
G++S + M P+V TY+ L+ LC + VD+AI ++ + +G P+V TY
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+ L +G K R+ D ++ D+ +G + +I GY + G D AL + M S
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+G +P+ +Y I++ LF GE +K M
Sbjct: 252 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%)
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
+M G PD++T + L++ C S+++ A+ + +++ GIK DV TILID LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+ A E+ + + +G + V Y+ +I G CK G +A + +M+S P+ +T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 340 IIIRALFEKGENDKGEKLLREMV 362
+I A ++G+ K + + + M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMI 145
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 206/395 (52%), Gaps = 29/395 (7%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR---IP-PNAVTY 58
++ +E +R + + PD+V + + I +LCK+ V DA ++S+M +P PN++TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDV-EVHTFNILVDALCKEGNVKEAKNVFAVMM 117
++ GFC VG L+ A L E I + D+ + ++NI + L + G EA+ V M
Sbjct: 295 NLMLKGFCKVGLLEDAKTLF-ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+G+ P+ SY+ LMDG C + ++ AK I LM + GV PD +Y +++G C + VD
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
A LL EM + + N L+ L K+GRIS+A +L+ +M+ +G D +T N ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIK-----------------------PDVFTYTILIDG 274
D LC S +DKAI ++K ++ G PD+ TY+ L++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
LCK GR +A+ +F +++ + AY + I+ +CK+G A ++ ME G
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
TY +I L K + + L+ EM +G+ N
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 201/398 (50%), Gaps = 43/398 (10%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPN--AVTYTSLIYGFCI 67
+L + K + +++ K + A+ + ++V R P N +V +L+ CI
Sbjct: 65 ILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCI 123
Query: 68 VGQLQQAVGLL-NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
+ + V L +M+L + + +TFN+L+ ALC V A+ +F M ++G KPN
Sbjct: 124 KERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF 183
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
++ L+ GYC +K ++ N M GV P+ Y I++ C+ D++ K++++M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM---HHRGTP-PDVITYNPLLDVLCK 242
E ++ D + +NS I LCK G++ DA ++ ++M + G P P+ ITYN +L CK
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 243 ------------------------SHNVD-----------KAIALIKEIQDQGIKPDVFT 267
S+N+ +A ++K++ D+GI P +++
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
Y IL+DGLCK+G L DA+ I + G Y +++GYC G D A +L+ +M
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ +P+A T I++ +L++ G + E+LLR+M +G
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 194/452 (42%), Gaps = 92/452 (20%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L+ + + + P + Y ++D LCK ++SDA + M + P+AVTY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+G+C VG++ A LL EM+ +T NIL+ +L K G + EA+ + M ++G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS-----------------------PD 159
+TV+ + ++DG C E++KA +I M G + PD
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK--- 216
+ +Y+ ++NGLCK EA L EM EK+ D++ YN I CK G+IS A++
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 217 --------------------------------LVNEMHHRGTPPDVITYNPLLDVLCKSH 244
L++EM +G P++ TYN + LC+
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV-------------------------- 278
V+ A L+ E+ + I P+VF++ LI+ CKV
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703
Query: 279 --------GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
G+L A E+ + +L +G+ + Y ++ CK+ + A ++ KM G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
D +I L + G + +M+
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 167/319 (52%), Gaps = 39/319 (12%)
Query: 90 VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
V+ +N+L+++ KE V+ ++ M+ G+ P T +++ L+ C V+ A+++F+
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFD 171
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
M ++G P+ ++ I++ G CK + D+ +LL+ M S ++ + + YN+++ C+ G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ-DQGI---KPDV 265
R D+ K+V +M G PD++T+N + LCK V A + +++ D+ + +P+
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDIL-------IKGYNVTVQ----------------- 301
TY +++ G CKVG L+DA+ +F+ I ++ YN+ +Q
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 302 -----------AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+Y ++++G CK G+ +A ++ M+ +G PDAVTY ++ G+
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 351 NDKGEKLLREMVARGLLYN 369
D + LL+EM+ L N
Sbjct: 412 VDAAKSLLQEMMRNNCLPN 430
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 179/387 (46%), Gaps = 62/387 (16%)
Query: 1 MGETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ AA LL+ R P+ ++ SL K +S+A +L +M K + VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 58 YTSLIYGFCIVGQLQQAV----------------------GLLNEMILKRMDV-EVHTFN 94
++ G C G+L +A+ GL+++ +++ + ++ T++
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
L++ LCK G EAKN+FA MM + ++P++V+Y+ + +C +++ A + M K+
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC-YNSLIDGLCKLGRISD 213
G +++Y +I GL + E L+DEM EK I+ IC YN+ I LC+ ++ D
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEM-KEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD-------------------------- 247
A L++EM + P+V ++ L++ CK + D
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNE 707
Query: 248 --------KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
KA L++ + D+G + F Y L++ LCK L+ A I ++ +GY
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Query: 300 VQAYTVMINGYCKEGLCDEALALISKM 326
A +I+G K G EA + KM
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
KP+ Y+ L++ + V ++ MV G++P ++ ++I LC VD A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
L DEM + + + L+ G CK G +L+N M G P+ + YN ++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY----N 297
+ D + ++++++++G+ PD+ T+ I LCK G++ DA IF D+ + Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
Y +M+ G+CK GL ++A L + + + +Y I ++ L G+ + E +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 358 LREMVARGL 366
L++M +G+
Sbjct: 349 LKQMTDKGI 357
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 38/404 (9%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+ + LEL R + P V +Y +ID LCK K ++DA L+ EM+A+R+ P+ +T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +LI G+C G +++ + M ++ + TFN L+ L K G V++A+NV M
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
G P+ ++S L DGY ++ A ++ V GV + + +I++N LCK ++
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDG--------------------------------- 204
+A ++L ++ ++ + + YN++IDG
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 205 --LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
C+LG + +A K VN+M +G P V TYN L+ + + DK ++KE++D G
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+V +Y LI+ LCK +L +AQ + +D+ +G + V+ Y ++I+G C +G ++A
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+M G + VTY +I L G+ + E LL E+ +GL
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 189/358 (52%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++ ++P ++ + T++ L K +V DA ++ EM P+A T++ L G+
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+ + A+G+ + + + +T +IL++ALCKEG +++A+ + M +G+ PN V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++DGYC ++ A+ M K+G+ PD +Y +I C++ ++ A K +++M
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + YN LI G + + ++ EM GT P+V++Y L++ LCK + +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A + ++++D+G+ P V Y +LIDG C G+++DA +++L KG + + Y +I+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G G EA L+ ++ G PD TY +I G + L EM G+
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 178/351 (50%), Gaps = 4/351 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VK + + ++++LCK+ + A ++ +AK + PN V Y ++I G+C G L A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ M + M + +N L+ C+ G ++ A+ M +GV P+ +Y+ L+ GY
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
E +K DI M G P+V SY +IN LCK + EA + +M +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YN LIDG C G+I DA++ EM +G +++TYN L+D L + + +A L+ E
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
I +G+KPDVFTY LI G G ++ +++++ G T++ Y ++I+ KEG+
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ L +M PD + Y ++ G+ +K L ++M+ + +
Sbjct: 650 -ELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 155/326 (47%), Gaps = 39/326 (11%)
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L NE I D + +L+D L K + NVF +++ +P+ Y +
Sbjct: 134 ALRNEGIYPSSD----SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAA 189
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ +V K ++FN M + P V Y ++I+GLCK K +++A +L DEM + +++
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
I YN+LIDG CK G ++K+ M P +IT+N LL L K+ V+ A ++KE
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 256 IQDQGIKPDVFTYTILIDG-----------------------------------LCKVGR 280
++D G PD FT++IL DG LCK G+
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++ A+EI + KG Y MI+GYC++G A I ME G PD + Y
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 341 IIRALFEKGENDKGEKLLREMVARGL 366
+IR E GE + EK + +M +G+
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGV 455
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 186/397 (46%), Gaps = 47/397 (11%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
LR + + P T ++D L K K +++ ++ P+ Y I +
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+ + + L N M R+ V +N+L+D LCK + +A+ +F M+ + + P+ ++Y++
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+DGYC K+ + M + P + ++ ++ GL K MV++A +L EM
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 191 IIADTICYNSLIDG-----------------------------------LCKLGRISDAW 215
+ D ++ L DG LCK G+I A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
+++ +G P+ + YN ++D C+ ++ A I+ ++ QG+KPD Y LI
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C++G +++A++ + +KG + +V+ Y ++I GY ++ D+ ++ +ME +G MP+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 336 VTYEIIIRALFEKGENDKGEKLL------REMVARGL 366
V+Y +I L KG KLL R+M RG+
Sbjct: 495 VSYGTLINCLC------KGSKLLEAQIVKRDMEDRGV 525
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 149/281 (53%), Gaps = 2/281 (0%)
Query: 91 HTFN-ILVDALCKEGN-VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF 148
H F+ +L+ L E + EA ++F + +G+ P++ S + L+D K+ ++F
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 149 NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
+++ P Y I K+ V + +L + M ++I YN LIDGLCK
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
R++DA +L +EM R P +ITYN L+D CK+ N +K+ + + ++ I+P + T+
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
L+ GL K G ++DA+ + +++ G+ ++++ +GY + AL +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
SG +A T I++ AL ++G+ +K E++L +A+GL+ N
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 179/404 (44%), Gaps = 42/404 (10%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A E+L R++ K P+ V+Y T+ID C+ + A M + + P+ + Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI FC +G+++ A +N+M LK + V T+NIL+ ++ + ++ M
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G PN VSY +L++ C ++ +A+ + M RGVSP V+ Y ++I+G C +++
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 179 AWK-----------------------------------LLDEMHSEKIIADTICYNSLID 203
A++ LL E+ + + D YNSLI
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G G + L EM G P + TY+ LL LC ++ L E+ +KP
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LKP 663
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
D+ Y ++ G ++ A + + ++ K + Y +I G K G E +LI
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+M + P+A TY II++ E + REM +G L
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 4/351 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V P V Y +I + +D+ EM PN V+Y +LI C +L +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ +M + + +V +N+L+D C +G +++A M+K+G++ N V+Y++L+DG
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ ++++A+D+ + ++G+ PDV +Y +I+G V L +EM I
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y+ LI LC I +L EM + PD++ YN +L +++KA L K+
Sbjct: 635 KTYHLLIS-LCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ ++ I D TY LI G KVG+L + + + ++ + Y +++ G+C+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A +M+ G + D ++ L E+ + + E ++ EM R L
Sbjct: 751 YMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 119/247 (48%), Gaps = 32/247 (12%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L++ ++ ++V Y T+ID L +S+A DL E+ K + P+ TY SLI G+
Sbjct: 554 EMLKKG-IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEG------------------------ 104
G +Q+ + L EM + + T+++L+ KEG
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVL 672
Query: 105 -------NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
++++A N+ M+++ + + +Y+SL+ G V ++ + + + + M R +
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+ +Y II+ G C++K A+ EM + + D N L+ GL + R +A +
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIV 792
Query: 218 VNEMHHR 224
++EM+ R
Sbjct: 793 ISEMNGR 799
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A E ++R +KP + Y +I SLC + + L+ EM K P+ + Y +++ +
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCY 675
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
+ G +++A L +MI K + ++ T+N L+ K G + E +++ M + ++P
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
+Y+ ++ G+C VK+ A + M ++G DV +++GL + EA ++ E
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 186 MH 187
M+
Sbjct: 796 MN 797
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 195/368 (52%), Gaps = 2/368 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E L+ ++ ++ D+V+YT++I C + L+ E++ + P A+TY +
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI GFC +GQL++A + MI + + V+T+ L+D LC G KEA + +M+++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+PN V+Y+ +++ C V A +I LM KR PD +Y I++ GLC +DEA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 181 KLLDEM--HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
KLL M S D I YN+LI GLCK R+ A + + + + D +T N LL+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
K+ +V+KA+ L K+I D I + TYT +IDG CK G L A+ + + +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+V Y +++ CKEG D+A L +M+ PD V++ I+I + G+ E LL
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 359 REMVARGL 366
M GL
Sbjct: 588 VGMSRAGL 595
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 200/384 (52%), Gaps = 37/384 (9%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + Y T+I CK + +A +++ M+ + + PN TYT LI G C VG+ ++A+ L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
LN MI K + T+NI+++ LCK+G V +A + +M K+ +P+ ++Y+ L+ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 138 VKEVNKAKDIFNLMVKRG--VSPDVQSYTIIINGLCKIKM-------------------- 175
++++A + LM+K PDV SY +I+GLCK
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 176 ---------------VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
V++A +L ++ KI+ ++ Y ++IDG CK G ++ A L+ +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M P V YN LL LCK ++D+A L +E+Q PDV ++ I+IDG K G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
+K A+ + + G + + Y+ +IN + K G DEA++ KM SG PDA +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 341 IIRALFEKGENDKGEKLLREMVAR 364
+++ +GE DK +L++++V +
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDK 663
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 209/433 (48%), Gaps = 74/433 (17%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G L L+ ++ +V + ++ LC++ A L EM + P+ +Y ++
Sbjct: 124 GFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEA------------ 109
I GFC +L++A+ L NEM + T+ IL+DA CK G + EA
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 110 -----------------------KNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
K +F ++++G P ++Y++L+ G+C + ++ +A +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
IF M++RGV P+V +YT +I+GLC + EA +LL+ M + + + YN +I+ LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK-EIQDQG-IKPD 264
K G ++DA ++V M R T PD ITYN LL LC ++D+A L+ ++D PD
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKG------------YNVTVQA---------- 302
V +Y LI GLCK RL A +I+ D+L++ N T++A
Sbjct: 424 VISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 303 --------------YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
YT MI+G+CK G+ + A L+ KM S P Y ++ +L ++
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 349 GENDKGEKLLREM 361
G D+ +L EM
Sbjct: 543 GSLDQAWRLFEEM 555
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 174/324 (53%)
Query: 39 AYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVD 98
A+ Y +M+ N V+ + L+ + + + A G+L M+ + V+ NIL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 99 ALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSP 158
LC+ +A ++ M + + P+ SY++++ G+C KE+ KA ++ N M G S
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
+ ++ I+I+ CK +DEA L EM + AD + Y SLI G C G + L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
+E+ RG P ITYN L+ CK + +A + + + ++G++P+V+TYT LIDGLC V
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
G+ K+A ++ ++ K Y ++IN CK+GL +A+ ++ M+ PD +TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 339 EIIIRALFEKGENDKGEKLLREMV 362
I++ L KG+ D+ KLL M+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLML 414
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
QL+ AV + + + + N++ L + N + A + + M++ N VS S
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNNLMA-KLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
L++ Y +++ A + LM+KRG + +V ++ I++ GLC+ +A LL EM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
++ D YN++I G C+ + A +L NEM G ++T+ L+D CK+ +D+A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ +KE++ G++ D+ YT LI G C G L + +F ++L +G + Y +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+CK G EA + M G P+ TY +I L G+ + +LL M+ +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+LL +L D V +++S K V+ A +L+ ++ +I N+ TYT++I GFC
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L A GLL +M + + V +N L+ +LCKEG++ +A +F M + P+ VS+
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++DG ++ A+ + M + G+SPD+ +Y+ +IN K+ +DEA D+M
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH-NVD 247
D +S++ G +LV ++ + D ++D +C S N+D
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMD 687
Query: 248 KAIALIKEIQDQ 259
A L++ D+
Sbjct: 688 LAKRLLRVTDDK 699
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 183/359 (50%), Gaps = 2/359 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E++ +KPD+V Y T+I CK A + +M + + +TY ++I
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V L EM K + V H F++++ LCKEG + E VF M+++G KPN
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ L+DGY V A + + M+ G PDV +Y++++NGLCK V+EA
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + +++ Y+SLIDGL K GR+ +A +L EM +G D YN L+D K VD
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 248 KAIALIKEI-QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
+AIAL K + +++G V+TYTIL+ G+ K R ++A +++ ++ KG T + +
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
G C G A ++ ++ G + DA E +I L + G + KL + RG
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 186/358 (51%), Gaps = 1/358 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ ++P + Y +++ L V A ++ M + RI P+ VTY ++I G+C GQ
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
Q+A+ L +M + + + T+ ++ A + + ++ M ++G++ ++S
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
++ G C ++N+ +F M+++G P+V YT++I+G K V++A +LL M E
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
D + Y+ +++GLCK GR+ +A + G + + Y+ L+D L K+ VD+A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LIKGYNVTVQAYTVMING 309
L +E+ ++G D + Y LID K ++ +A +F+ + +G + TV YT++++G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
KE +EAL L M G P A + + L G+ + K+L E+ G++
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 183/380 (48%), Gaps = 36/380 (9%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +++D L K V + SE+ P +LI F +G +++ + + +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
++ ++T+N L++ L V A+ VF VM +KP+ V+Y++++ GYC +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 143 KAKD-----------------------------------IFNLMVKRGVSPDVQSYTIII 167
KA + ++ M ++G+ +++++I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
GLCK ++E + + + M + + Y LIDG K G + DA +L++ M G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
PDV+TY+ +++ LCK+ V++A+ + G+ + Y+ LIDGL K GR+ +A+ +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV-TYEIIIRALF 346
F+++ KG Y +I+ + K DEA+AL +ME V TY I++ +F
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 347 EKGENDKGEKLLREMVARGL 366
++ N++ KL M+ +G+
Sbjct: 515 KEHRNEEALKLWDMMIDKGI 534
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 175/370 (47%), Gaps = 12/370 (3%)
Query: 5 SAALE-----LLRRQLVK--PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
SA++E R+ L+K P+ V + D + + ++ ++ +S K+ N
Sbjct: 96 SASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRK-QKKYTHNLEC 154
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y SL+ + + + + +E+ + V N L+ + K G V+E V+ M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G++P +Y+ LM+G V+ A+ +F +M + PD+ +Y +I G CK
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG--TPPDVITYNP 235
+A + L +M + AD I Y ++I L EM +G PP ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA--FSL 332
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++ LCK +++ + + + +G KP+V YT+LIDG K G ++DA + ++ +G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
+ V Y+V++NG CK G +EAL G +++ Y +I L + G D+ E
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 356 KLLREMVARG 365
+L EM +G
Sbjct: 453 RLFEEMSEKG 462
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 169/353 (47%), Gaps = 42/353 (11%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E E + R+ KP+V +YT +ID K V DA L M+ + P+ VTY+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
++ G C G++++A+ + + + ++ L+D L K G V EA+ +F M ++G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM-VKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ Y++L+D + ++V++A +F M + G V +YTI+++G+ K +EA
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
KL D M + I C+ +L GLC G+++ A K+++E+ G +LD
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV---------ILDA 573
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C+ +I+ LCK GR+K+A ++ I +G V
Sbjct: 574 ACED---------------------------MINTLCKAGRIKEACKLADGITERGREVP 606
Query: 300 VQAYTVMINGYCKEGLCDEALALI-SKM----ESSGRMPDAVTYEIIIRALFE 347
+ TVMIN K G D A+ L+ SK+ E G + V + ++ F+
Sbjct: 607 GRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETCFD 659
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 18/244 (7%)
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+ S S +DG+C ++K +SP+ S+ + + + + D AW
Sbjct: 96 SASMESNLDGFCR-----------KFLIK--LSPNFVSFVLKSDEI--REKPDIAWSFFC 140
Query: 185 EMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVN-EMHHRGTPPDVITYNPLLDVLCK 242
+K + CY SL+D L L + D + V+ E+ P V N L+ K
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLA-LAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGK 199
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
V++ + + +++++ GI+P ++TY L++GL + A+ +F+ + +
Sbjct: 200 LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT 259
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
Y MI GYCK G +A+ + ME+ G D +TY +I+A + + L +EM
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 363 ARGL 366
+G+
Sbjct: 320 EKGI 323
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 182/335 (54%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+V ++ +++ CK+ +SDA ++ E+ + + P V++ +LI G+C VG L + L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++M R +V T++ L++ALCKE + A +F M K+G+ PN V +++L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
E++ K+ + M+ +G+ PD+ Y ++NG CK + A ++D M + D I Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
+LIDG C+ G + A ++ EM G D + ++ L+ +CK V A ++E+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
GIKPD TYT+++D CK G + ++ +++ G+ +V Y V++NG CK G
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
A L+ M + G +PD +TY ++ + K
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 182/343 (53%)
Query: 25 TIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILK 84
++D + K + Y E++ P N + L+ FC G + A + +E+ +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 85 RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
+ V +FN L++ CK GN+ E + M K +P+ +YS+L++ C +++ A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
+F+ M KRG+ P+ +T +I+G + +D + +M S+ + D + YN+L++G
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
CK G + A +V+ M RG PD ITY L+D C+ +V+ A+ + KE+ GI+ D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
++ L+ G+CK GR+ DA+ +++L G YT+M++ +CK+G L+
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+M+S G +P VTY +++ L + G+ + LL M+ G++
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 171/349 (48%), Gaps = 4/349 (1%)
Query: 22 MYT---TIIDSLCKDKLVSDAYDLYSEMVAKRIPPN-AVTYTSLIYGFCIVGQLQQAVGL 77
M+T ++I+ + K + A ++ +V R+ P +L+ + +G + A+
Sbjct: 133 MFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQC 192
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
R DV + L+D + K + ++ G N ++ LM+ +C
Sbjct: 193 FRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCK 252
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ A+ +F+ + KR + P V S+ +ING CK+ +DE ++L +M + D
Sbjct: 253 EGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFT 312
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y++LI+ LCK ++ A L +EM RG P+ + + L+ ++ +D +++
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G++PD+ Y L++G CK G L A+ I ++ +G YT +I+G+C+ G +
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
AL + +M+ +G D V + ++ + ++G E+ LREM+ G+
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK--------------IIADTICYNS 200
G V++Y ++ L +M EA L++ + S K + +C
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMC-GF 171
Query: 201 LIDGL----CKLGRISDAWKLVN-EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
L+D L LG I DA + HR P + LLD + K + E
Sbjct: 172 LVDALMITYTDLGFIPDAIQCFRLSRKHRFDVP-IRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
I D G +V+ + IL++ CK G + DAQ++F +I + TV ++ +INGYCK G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
DE L +ME S PD TY +I AL ++ + D L EM RGL+ N
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 38/168 (22%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
+ AL + R +KPD V YT ++D+ CK + L EM + P+ VTY L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G C +GQ++ A ++L+DA M+ GV
Sbjct: 528 NGLCKLGQMKNA-------------------DMLLDA----------------MLNIGVV 552
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
P+ ++Y++L++G+ + N +K + G+ D+ SY I+N L
Sbjct: 553 PDDITYNTLLEGHH--RHANSSKRYIQ-KPEIGIVADLASYKSIVNEL 597
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 196/360 (54%), Gaps = 4/360 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G EL R +P V +Y +I+ LCK+ A++L EMV K I PN ++Y++
Sbjct: 229 VGLVKEGRELAER--FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ- 119
LI C GQ++ A L +M+ + ++T + LV G +A +++ M++
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G++PN V+Y++L+ G+C + KA +F+ M + G SP++++Y +ING K +D A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+ ++M + + + Y ++++ LC+ + +A L+ M P V T+N +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 240 LCKSHNVDKAIALIKEIQDQG-IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + +D A + ++++ Q P++ TY L+DGL K R+++A + ++I ++G
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y +++G C GL AL L+ KM G+ PD +T +II A ++G+ ++ ++L
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 11/371 (2%)
Query: 6 AALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
A EL+R + + P+V+ Y+T+I+ LC + A+ ++M+ + PN T +SL+
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 63 YGFCIVGQLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
G + G A+ L N+MI + V +N LV C GN+ +A +VF+ M + G
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
PN +Y SL++G+ ++ A I+N M+ G P+V YT ++ LC+ EA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM--HHRGTPPDVITYNPLLDV 239
L++ M E +N+ I GLC GR+ A K+ +M HR PP+++TYN LLD
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR-CPPNIVTYNELLDG 502
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
L K++ +++A L +EI +G++ TY L+ G C G A ++ +++ G +
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGR---MPDAVTYEIIIRALFEKGENDKGEK 356
++I YCK+G + A ++ + S GR PD ++Y +I L + G
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621
Query: 357 LLREMVARGLL 367
LL M++ G++
Sbjct: 622 LLERMISAGIV 632
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 183/361 (50%), Gaps = 7/361 (1%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++R +P+V Y ++ +LCK+ V A L EM K P+AV+YT++I C VG
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+++ + +R + V +N L++ LCKE + K A + M+++G+ PN +SYS+
Sbjct: 232 VKEG-----RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM-HSE 189
L++ C ++ A M+KRG P++ + + ++ G +A L ++M
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+ + + YN+L+ G C G I A + + M G P++ TY L++ K ++D A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ + ++ G P+V YT +++ LC+ + K+A+ + + + + +V + I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 310 YCKEGLCDEALALISKMESSGRM-PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
C G D A + +ME R P+ VTY ++ L + ++ L RE+ RG+ +
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 369 N 369
+
Sbjct: 527 S 527
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V +Y ++D+L + + Y +Y +M PN TY L+ C ++ A L
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L EM K + ++ ++ ++C+ G VKE + + + +P Y++L++G C
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCK 258
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ A ++ MV++G+SP+V SY+ +IN LC ++ A+ L +M +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 198 YNSLIDGLCKLGRISDAWKLVNEM-HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+SL+ G G DA L N+M G P+V+ YN L+ C N+ KA+++ +
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
++ G P++ TY LI+G K G L A I+ +L G V YT M+ C+
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
EA +LI M P T+ I+ L + G D EK+ R+M
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 180/358 (50%), Gaps = 8/358 (2%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
L K + + +I L D V L +M + + + S+I + VG ++
Sbjct: 70 NLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER 129
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
AV + + D V +N ++D L E ++ V+ M + G +PN +Y+ L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
C +V+ AK + M +G PD SYT +I+ +C++ +V E +L + E +++
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF--EPVVS 247
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
YN+LI+GLCK A++L+ EM +G P+VI+Y+ L++VLC S ++ A + +
Sbjct: 248 ---VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV--TVQAYTVMINGYC 311
++ +G P+++T + L+ G G DA +++ +I+G+ + V AY ++ G+C
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ-MIRGFGLQPNVVAYNTLVQGFC 363
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G +A+++ S ME G P+ TY +I ++G D + +M+ G N
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 161/316 (50%), Gaps = 7/316 (2%)
Query: 2 GETSAALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G T AL+L + + ++P+VV Y T++ C + A ++S M PN T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y SLI GF G L AV + N+M+ V + +V+ALC+ KEA+++ +M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG-VSPDVQSYTIIINGLCKIKMV 176
K+ P+ ++++ + G C ++ A+ +F M ++ P++ +Y +++GL K +
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+EA+ L E+ + + YN+L+ G C G A +LV +M G PD IT N +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 237 LDVLCKSHNVDKAIALIKEIQ--DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
+ CK ++A ++ + + +PDV +YT +I GLC+ +D + + ++
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 295 GYNVTVQAYTVMINGY 310
G ++ ++V+IN +
Sbjct: 630 GIVPSIATWSVLINCF 645
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 193/341 (56%), Gaps = 1/341 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R + P + TT+I LCK S A +L+ + + K + T +L++G C
Sbjct: 460 EMLLRNM-SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+L +A + E++ + ++ ++N L+ C + + EA M+K+G+KP+ +Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S L+ G + +V +A ++ + G+ PDV +Y+++I+G CK + +E + DEM S
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + +T+ YN LI C+ GR+S A +L +M H+G P+ TY L+ + V++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L +E++ +G++P+VF YT LIDG K+G++ + + +++ K + YTVMI
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
GY ++G EA L+++M G +PD++TY+ I ++G
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 187/345 (54%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+T++I LC + A EM+ + + P T+LI G C G+ +A+ L + +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
K V+ T N L+ LC+ G + EA + ++ +G + VSY++L+ G C K+++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+A + MVKRG+ PD +Y+I+I GL + V+EA + D+ ++ D Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
DG CK R + + +EM + P+ + YN L+ C+S + A+ L ++++ +GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+ TYT LI G+ + R+++A+ +F+++ ++G V YT +I+GY K G + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ +M S P+ +TY ++I G + +LL EM +G++
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 35/386 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++P ++ Y+ ++ L + K + DAY + EM K PPN + Y +LI F G L +A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS----- 130
+ + M+ K + + T+N L+ CK G A+ + M+ G N S++S
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 131 ------------------------------LMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
L+ G C + +KA +++ + +G D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
++ +++GLC+ +DEA+++ E+ + D + YN+LI G C ++ +A+ ++E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M RG PD TY+ L+ L + V++AI + + G+ PDV+TY+++IDG CK R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++ QE F +++ K Y +I YC+ G AL L M+ G P++ TY
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 341 IIRALFEKGENDKGEKLLREMVARGL 366
+I+ + ++ + L EM GL
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 170/331 (51%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PDV ++TT I++ CK V +A L+S+M + PN VT+ ++I G + G+ +A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+M+ + M+ + T++ILV L + + +A V M K+G PN + Y++L+D +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+NKA +I +LMV +G+S +Y +I G CK D A +LL EM S +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ S+I LC A + V EM R P L+ LCK KA+ L +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++G D T L+ GLC+ G+L +A I ++IL +G + +Y +I+G C +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALF 346
DEA + +M G PD TY I+I LF
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R V D V Y T+I C K + +A+ EMV + + P+ TY+ LI G +
Sbjct: 530 EILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++A+ ++ M +V+T+++++D CK +E + F MM + V+PNTV Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+ YC ++ A ++ M +G+SP+ +YT +I G+ I V+EA L +EM
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
E + + Y +LIDG KLG++ L+ EMH + P+ ITY ++ + NV +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVG----RLKDAQEIFQDILIKGYNVTVQ 301
A L+ E++++GI PD TY I G K G K + E +I+G+N +Q
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLIQ 825
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 35/404 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ L+ + ++ P+V++Y +IDS + ++ A ++ MV+K + + TY +
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFN-------------------------- 94
LI G+C GQ A LL EM+ +V +F
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 95 ---------ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
L+ LCK G +A ++ + +G +T + ++L+ G C ++++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
I ++ RG D SY +I+G C K +DEA+ LDEM + D Y+ LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
+ ++ +A + ++ G PDV TY+ ++D CK+ ++ E+ + ++P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
Y LI C+ GRL A E+ +D+ KG + YT +I G +EA L +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M G P+ Y +I + G+ K E LLREM ++ + N
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 168/329 (51%), Gaps = 4/329 (1%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
+A+D+ V K + P+ +T+ I FC G++++AV L ++M + V TFN ++
Sbjct: 247 EAFDV----VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
D L G EA M+++G++P ++YS L+ G K + A + M K+G
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+V Y +I+ + +++A ++ D M S+ + + YN+LI G CK G+ +A +L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
+ EM G + ++ ++ +LC D A+ + E+ + + P T LI GLCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G+ A E++ L KG+ V + +++G C+ G DEA + ++ G + D V+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGL 366
Y +I K + D+ L EMV RGL
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 147/276 (53%), Gaps = 1/276 (0%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T NIL+ +L + ++ F V+ K GV P+ +++ ++ +C +V +A +F+ M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
+ GV+P+V ++ +I+GL DEA+ ++M + I Y+ L+ GL + RI
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
DA+ ++ EM +G PP+VI YN L+D ++ +++KAI + + +G+ TY L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I G CK G+ +A+ + +++L G+NV ++T +I C + D AL + +M
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
P +I L + G++ K +L + + +G +
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A D+F ++ +G+ P + I++ L + + + D + + + D + + I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
CK G++ +A KL ++M G P+V+T+N ++D L D+A +++ ++G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
+ TY+IL+ GL + R+ DA + +++ KG+ V Y +I+ + + G ++A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M S G + TY +I+ + G+ D E+LL+EM++ G N
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E E +R + ++P+V YT +ID K + L EM +K + PN +TYT +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEA 109
G+ G + +A LLNEM K + + T+ + K+G V EA
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 193/341 (56%), Gaps = 1/341 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R + P + TT+I LCK S A +L+ + + K + T +L++G C
Sbjct: 460 EMLLRNM-SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+L +A + E++ + ++ ++N L+ C + + EA M+K+G+KP+ +Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S L+ G + +V +A ++ + G+ PDV +Y+++I+G CK + +E + DEM S
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + +T+ YN LI C+ GR+S A +L +M H+G P+ TY L+ + V++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L +E++ +G++P+VF YT LIDG K+G++ + + +++ K + YTVMI
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
GY ++G EA L+++M G +PD++TY+ I ++G
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 187/345 (54%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+T++I LC + A EM+ + + P T+LI G C G+ +A+ L + +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
K V+ T N L+ LC+ G + EA + ++ +G + VSY++L+ G C K+++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+A + MVKRG+ PD +Y+I+I GL + V+EA + D+ ++ D Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
DG CK R + + +EM + P+ + YN L+ C+S + A+ L ++++ +GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+ TYT LI G+ + R+++A+ +F+++ ++G V YT +I+GY K G + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ +M S P+ +TY ++I G + +LL EM +G++
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 35/386 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++P ++ Y+ ++ L + K + DAY + EM K PPN + Y +LI F G L +A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS----- 130
+ + M+ K + + T+N L+ CK G A+ + M+ G N S++S
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 131 ------------------------------LMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
L+ G C + +KA +++ + +G D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
++ +++GLC+ +DEA+++ E+ + D + YN+LI G C ++ +A+ ++E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M RG PD TY+ L+ L + V++AI + + G+ PDV+TY+++IDG CK R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++ QE F +++ K Y +I YC+ G AL L M+ G P++ TY
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 341 IIRALFEKGENDKGEKLLREMVARGL 366
+I+ + ++ + L EM GL
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 170/331 (51%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PDV ++TT I++ CK V +A L+S+M + PN VT+ ++I G + G+ +A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+M+ + M+ + T++ILV L + + +A V M K+G PN + Y++L+D +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+NKA +I +LMV +G+S +Y +I G CK D A +LL EM S +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ S+I LC A + V EM R P L+ LCK KA+ L +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++G D T L+ GLC+ G+L +A I ++IL +G + +Y +I+G C +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALF 346
DEA + +M G PD TY I+I LF
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R V D V Y T+I C K + +A+ EMV + + P+ TY+ LI G +
Sbjct: 530 EILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++++A+ ++ M +V+T+++++D CK +E + F MM + V+PNTV Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+ YC ++ A ++ M +G+SP+ +YT +I G+ I V+EA L +EM
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
E + + Y +LIDG KLG++ L+ EMH + P+ ITY ++ + NV +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVG----RLKDAQEIFQDILIKGYNVTVQ 301
A L+ E++++GI PD TY I G K G K + E +I+G+N +Q
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLIQ 825
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 35/404 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ L+ + ++ P+V++Y +IDS + ++ A ++ MV+K + + TY +
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFN-------------------------- 94
LI G+C GQ A LL EM+ +V +F
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 95 ---------ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
L+ LCK G +A ++ + +G +T + ++L+ G C ++++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
I ++ RG D SY +I+G C K +DEA+ LDEM + D Y+ LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
+ ++ +A + ++ G PDV TY+ ++D CK+ ++ E+ + ++P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
Y LI C+ GRL A E+ +D+ KG + YT +I G +EA L +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M G P+ Y +I + G+ K E LLREM ++ + N
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 168/329 (51%), Gaps = 4/329 (1%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
+A+D+ V K + P+ +T+ I FC G++++AV L ++M + V TFN ++
Sbjct: 247 EAFDV----VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
D L G EA M+++G++P ++YS L+ G K + A + M K+G
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+V Y +I+ + +++A ++ D M S+ + + YN+LI G CK G+ +A +L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
+ EM G + ++ ++ +LC D A+ + E+ + + P T LI GLCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G+ A E++ L KG+ V + +++G C+ G DEA + ++ G + D V+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGL 366
Y +I K + D+ L EMV RGL
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 147/276 (53%), Gaps = 1/276 (0%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T NIL+ +L + ++ F V+ K GV P+ +++ ++ +C +V +A +F+ M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
+ GV+P+V ++ +I+GL DEA+ ++M + I Y+ L+ GL + RI
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
DA+ ++ EM +G PP+VI YN L+D ++ +++KAI + + +G+ TY L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I G CK G+ +A+ + +++L G+NV ++T +I C + D AL + +M
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
P +I L + G++ K +L + + +G +
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A D+F ++ +G+ P + I++ L + + + D + + + D + + I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
CK G++ +A KL ++M G P+V+T+N ++D L D+A +++ ++G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
+ TY+IL+ GL + R+ DA + +++ KG+ V Y +I+ + + G ++A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M S G + TY +I+ + G+ D E+LL+EM++ G N
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E E +R + ++P+V YT +ID K + L EM +K + PN +TYT +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEA 109
G+ G + +A LLNEM K + + T+ + K+G V EA
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 203/409 (49%), Gaps = 44/409 (10%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ + A + +R L + P+VV YT +I LC+D + +A+ +Y +++ + + P+ VTY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI GFC G L+ L +MI +V + +LVD L K+G + A M+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII------NGLCK 172
Q ++ N V ++SL+DG+C + ++A +F LM G+ PDV ++T ++ + CK
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 173 IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
+L D M KI AD N +I L K RI DA K N + PD++T
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 233 YNP-----------------------------------LLDVLCKSHNVDKAIALIKEIQ 257
YN L+ VLCK++++D AI + +
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++G KP+ TY L+D K ++ + ++F+++ KG + ++ +Y+++I+G CK G D
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA + + + +PD V Y I+IR + G + L M+ G+
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 199/409 (48%), Gaps = 44/409 (10%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE A +L + ++ ++PD++ Y+T+ID K ++ + L+S+ + K + + V +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+S I + G L A + M+ + + V T+ IL+ LC++G + EA ++ ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G++P+ V+YSSL+DG+C + ++ M+K G PDV Y ++++GL K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY----- 233
A + +M + I + + +NSLIDG C+L R +A K+ M G PDV T+
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 234 ------------------------------------NPLLDVLCKSHNVDKAIALIKEIQ 257
N ++ +L K H ++ A +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ ++PD+ TY +I G C + RL +A+ IF+ + + + T++I+ CK D
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A+ + S M G P+AVTY ++ + + + KL EM +G+
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 171/336 (50%), Gaps = 3/336 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSL-CKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+L R + V + ++D+L CK + V+ A D + ++ + V+ ++ G
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLS- 263
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V Q++ A LL+ ++ V TF L++ CK G + A ++F VM ++G++P+ ++
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
YS+L+DGY + +F+ + +GV DV ++ I+ K + A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ I + + Y LI GLC+ GRI +A+ + ++ RG P ++TY+ L+D CK N+
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
AL +++ G PDV Y +L+DGL K G + A +L + + V + +I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
+G+C+ DEAL + M G PD T+ ++R
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 173/334 (51%), Gaps = 7/334 (2%)
Query: 35 LVSDAYDLYSEMVAKRIPPNAVTYTSLIYG--FCIVGQLQQAVGLLNEMILKRMDVEVHT 92
L++D +D ++ I P+ V+ + FC G++ +A+ ++ + V + +
Sbjct: 199 LIADHFD---KLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVS 254
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
N ++ L + ++ A + ++++ G PN V++ +L++G+C E+++A D+F +M
Sbjct: 255 CNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+RG+ PD+ +Y+ +I+G K M+ KL + + + D + ++S ID K G ++
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A + M +G P+V+TY L+ LC+ + +A + +I +G++P + TY+ LI
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
DG CK G L+ +++D++ GY V Y V+++G K+GL A+ KM
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ V + +I D+ K+ R M G+
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 125/234 (53%), Gaps = 6/234 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+L++R + D+ + +I L K + DA ++ ++ ++ P+ VTY ++I G+C
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ +L +A + + + T IL+ LCK ++ A +F++M ++G KPN V+
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y LMD + ++ + +F M ++G+SP + SY+III+GLCK VDEA + +
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD------VITYNP 235
K++ D + Y LI G CK+GR+ +A L M G PD + YNP
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNP 793
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E ELL+ P+ V T +I LCK+ + A ++S M K PNAVTY L+
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F ++ + L EM K + + +++I++D LCK G V EA N+F + +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
P+ V+Y+ L+ GYC V + +A ++ M++ GV PD
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 2/240 (0%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
LM+ C V+KA +IF + GV S ++N L VD D++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 191 IIADTICYNSLI-DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I + + + D L G ++ A + RG +++ N +L L ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVA 270
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L+ + D G P+V T+ LI+G CK G + A ++F+ + +G + AY+ +I+G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
Y K G+ L S+ G D V + I + G+ + + M+ +G+ N
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 151/242 (62%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+K DVV+ T I+D LCKD +A +L++EM K I PN +TY +I FC G+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL MI K+++ ++ TF+ L++A KE V EA+ ++ M++ + P T++Y+S++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C V+ AK + + M +G SPDV +++ +ING CK K VD ++ EMH I+A+T
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ Y +LI G C++G + A L+NEM G PD IT++ +L LC + KA A++++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 256 IQ 257
+Q
Sbjct: 246 LQ 247
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 136/234 (58%)
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+VD LCK+GN A+N+F M ++G+ PN ++Y+ ++D +C + A + M+++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
++PD+ +++ +IN K + V EA ++ EM I TI YNS+IDG CK R+ DA
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
++++ M +G PDV+T++ L++ CK+ VD + + E+ +GI + TYT LI G
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
C+VG L AQ++ +++ G + M+ G C + +A A++ ++ S
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 134/246 (54%)
Query: 46 MVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN 105
M I + V T+++ C G A L EM K + V T+N ++D+ C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI 165
+A + M+++ + P+ V++S+L++ + ++V++A++I+ M++ + P +Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
+I+G CK VD+A ++LD M S+ D + +++LI+G CK R+ + ++ EMH RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 226 TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQ 285
+ +TY L+ C+ ++D A L+ E+ G+ PD T+ ++ GLC L+ A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 286 EIFQDI 291
I +D+
Sbjct: 241 AILEDL 246
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 132/246 (53%)
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M + +K + V ++++D C A+++F M ++G+ P+V +Y +I+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+A +LL M ++I D + +++LI+ K ++S+A ++ EM P ITYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++D CK VD A ++ + +G PDV T++ LI+G CK R+ + EIF ++ +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
YT +I+G+C+ G D A L+++M S G PD +T+ ++ L K E K
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 356 KLLREM 361
+L ++
Sbjct: 241 AILEDL 246
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%)
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
M + + DV T I++ LCK A L EMH + I + + YN +ID C GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
SDA +L+ M + PD++T++ L++ K V +A + KE+ I P TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+IDG CK R+ DA+ + + KG + V ++ +INGYCK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ + VTY +I + G+ D + LL EM++ G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S A +LLR + + PD+V ++ +I++ K++ VS+A ++Y EM+ I P +TY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
S+I GFC ++ A +L+ M K +V TF+ L++ CK V +F M +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ NTV+Y++L+ G+C V +++ A+D+ N M+ GV+PD ++ ++ GLC K + +
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 179 AWKLLDEM 186
A+ +L+++
Sbjct: 239 AFAILEDL 246
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%)
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M I AD + +++D LCK G +A L EMH +G P+V+TYN ++D C S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
A L++ + ++ I PD+ T++ LI+ K ++ +A+EI++++L T Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
MI+G+CK+ D+A ++ M S G PD VT+ +I + D G ++ EM RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 366 LLYN 369
++ N
Sbjct: 181 IVAN 184
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 202/368 (54%), Gaps = 8/368 (2%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCK---DKLVSDAYDLYSEMVAKRIPPNA 55
G+ AL++ ++ + +KP+++ T++ L + +S A +++ +MV + N
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFA 114
T+ L+ G+C+ G+L+ A+G+L M+ + +++ + T+N ++ A+ K+G + + K +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 115 VMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
M K G+ PN V+Y++L+ GYC + + +A I LM + V PD+ +Y I+INGLC
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
+ E +L+D M S K+ D + YN+LIDG +LG +A KL+ +M + G + +T+N
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 235 PLLDVLCKSHNVDKAIALIKEIQD-QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
L LCK + +KE+ D G PD+ TY LI KVG L A E+ +++
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
KG + +++ CKE DEA L++ G + D VTY +I F + + +K
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 354 GEKLLREM 361
++ EM
Sbjct: 505 ALEMWDEM 512
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 190/400 (47%), Gaps = 37/400 (9%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E +EL+++ V PD+ Y +I+ LC + + +L M + ++ P+ VTY +
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKE----------------- 103
LI G +G +A L+ +M + T NI + LCKE
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 104 -------------------GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
G++ A + M ++G+K NT++ ++++D C +++++A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
++ N KRG D +Y +I G + + V++A ++ DEM KI +NSLI G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
LC G+ A + +E+ G PD T+N ++ CK V+KA E KPD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
+T IL++GLCK G + A F + LI+ V Y MI+ +CK+ EA L+S
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+ME G PD TY I L E G+ + ++LL++ +
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 40/401 (9%)
Query: 2 GETSAALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G+ AL +L R + V PD V Y TI+ ++ K +SD +L +M + PN VT
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +L+YG+C +G L++A ++ M + ++ T+NIL++ LC G+++E + M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 118 KQGVKPNTVSYSSLMDG---------------------------------YCLVKEVNK- 143
++P+ V+Y++L+DG L KE +
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 144 --AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+ + L+ G SPD+ +Y +I K+ + A +++ EM + I +TI N++
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+D LCK ++ +A L+N H RG D +TY L+ + V+KA+ + E++ I
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P V T+ LI GLC G+ + A E F ++ G + +I GYCKEG ++A
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
++ PD T I++ L ++G +K ++
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 162/309 (52%), Gaps = 27/309 (8%)
Query: 1 MGETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ S ALE++R ++ +K + + TI+D+LCK++ + +A++L + + + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +LI GF ++++A+ + +EM ++ V TFN L+ LC G + A F +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G+ P+ +++S++ GYC V KA + +N +K PD + I++NGLCK M +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A + + E+ + DT+ YN++I CK ++ +A+ L++EM +G PD TYN +
Sbjct: 609 KALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 238 DVLCKSHNVDKAIALIKEIQ-----------------------DQGIKPDVFTYTILIDG 274
+L + + + L+K+ + + + Y+ +ID
Sbjct: 668 SLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDE 727
Query: 275 LCKVGRLKD 283
LC GRLK+
Sbjct: 728 LCSRGRLKE 736
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 157/274 (57%), Gaps = 4/274 (1%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG---YCLVKEVNKAKDIFN 149
F+I + A EG A +F M++ +KPN ++ ++L+ G Y ++ A+++F+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSLIDGLCKL 208
MVK GVS +VQ++ +++NG C +++A +L+ M SE K+ D + YN+++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
GR+SD +L+ +M G P+ +TYN L+ CK ++ +A +++ ++ + PD+ TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
ILI+GLC G +++ E+ + V Y +I+G + GL EA L+ +ME+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
G + VT+ I ++ L ++ + + + ++E+V
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 210 RISDAW-----KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
R SDA L++ H PP ++ L A+ + +++ +KP+
Sbjct: 106 RTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPN 165
Query: 265 VFTYTILIDGLCKVG---RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
+ T L+ GL + + A+E+F D++ G ++ VQ + V++NGYC EG ++AL
Sbjct: 166 LLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 322 LISKMESSGRM-PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ +M S ++ PD VTY I++A+ +KG ++LL +M GL+ N
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 188/354 (53%), Gaps = 2/354 (0%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIPPNAVTYTSLIYGFCIVGQLQ 72
++K D + + T+ID LCK + +A +L M + +R PNAVTY LI G+C G+L+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
A +++ M + V T N +V +C+ + A F M K+GVK N V+Y +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
C V V KA + M++ G SPD + Y +I+GLC+++ +A ++++++
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
D + YN LI C ++++ +M G PD ITYN L+ K + + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LIKGYNVTVQAYTVMINGYC 311
++++++ G+ P V TY +ID C VG L +A ++F+D+ L N Y ++IN +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
K G +AL+L +M+ P+ TY + + L EK + + KL+ EMV +
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 193/362 (53%), Gaps = 15/362 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V P+ V T I SLCK+ + A+D+ S+++ + P A + +L+ C+ + +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--I 310
Query: 76 GLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVFAVMMKQG------VKPNT 125
+N+++LK +V++ T IL++ LCK V EA VF M + +K ++
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADS 370
Query: 126 VSYSSLMDGYCLVKEVNKAKDIF-NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+ +++L+DG C V + +A+++ + ++ +P+ +Y +I+G C+ ++ A +++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M ++I + + N+++ G+C+ ++ A +M G +V+TY L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
NV+KA+ +++ + G PD Y LI GLC+V R DA + + + G+++ + AY
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++I +C + ++ +++ ME G+ PD++TY +I + + + E+++ +M
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 365 GL 366
GL
Sbjct: 611 GL 612
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 146/291 (50%), Gaps = 8/291 (2%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ ++ VK +VV Y T+I + C V A Y +M+ P+A Y +LI G C V +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
A+ ++ ++ +++ +N+L+ C + N ++ + M K+G KP++++Y++
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM--HS 188
L+ + K+ + + M + G+ P V +Y +I+ C + +DEA KL +M HS
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
K+ +T+ YN LI+ KLG A L EM + P+V TYN L L + +
Sbjct: 647 -KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+ L+ E+ +Q +P+ T IL++ L L ++ Q GY+V
Sbjct: 706 LLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ-----GYSVA 751
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 151/359 (42%), Gaps = 91/359 (25%)
Query: 32 KDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV- 90
+DKL+ LY K IP V LI F +G + Q+V ++ +R+D +
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSV-----LVYERLDSNMK 183
Query: 91 --HTFNILVDALCKEGNVKEAKNVFAVMM-KQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
N++VD L + G V +A V M+ K+ V P
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP------------------------ 219
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA--WKLLDEMHSEKIIADTICYNSLIDGL 205
P+ + I+++ + K +++ E L+ S + +++ I L
Sbjct: 220 ----------PNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 206 CKLGRISDAWKLVNEMHHRGTP-----------------------------------PDV 230
CK R + AW +++++ TP PDV
Sbjct: 270 CKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQ----DQG--IKPDVFTYTILIDGLCKVGRLKDA 284
+T L++ LCKS VD+A+ + ++++ D G IK D + LIDGLCKVGRLK+A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 285 QEIFQDI-LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+E+ + L + Y +I+GYC+ G + A ++S+M+ P+ VT I+
Sbjct: 390 EELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 180/345 (52%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDV Y +I+ CK + DA + M +K P+ VTY +I C G+L A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+LN+++ V T+ IL++A EG V EA + M+ +G+KP+ +Y++++ G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V++A ++ + +G PDV SY I++ L +E KL+ +M SEK + +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y+ LI LC+ G+I +A L+ M +G PD +Y+PL+ C+ +D AI ++ +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
G PD+ Y ++ LCK G+ A EIF + G + +Y M + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
AL +I +M S+G PD +TY +I L +G D+ +LL +M
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 193/364 (53%), Gaps = 1/364 (0%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E+ LE + R+ PDV++ T +I + + A + E++ K P+ Y +LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALI 165
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
GFC + ++ A +L+ M K + T+NI++ +LC G + A V ++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P ++Y+ L++ L V++A + + M+ RG+ PD+ +Y II G+CK MVD A+++
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+ + + D I YN L+ L G+ + KL+ +M P+V+TY+ L+ LC+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+++A+ L+K ++++G+ PD ++Y LI C+ GRL A E + ++ G +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
Y ++ CK G D+AL + K+ G P++ +Y + AL+ G+ + ++ EM+
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 363 ARGL 366
+ G+
Sbjct: 466 SNGI 469
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 196/364 (53%), Gaps = 3/364 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL++L + L +P V+ YT +I++ + V +A L EM+++ + P+ TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
++I G C G + +A ++ + LK + +V ++NIL+ AL +G +E + + M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ PN V+YS L+ C ++ +A ++ LM ++G++PD SY +I C+ +D
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + L+ M S+ + D + YN+++ LCK G+ A ++ ++ G P+ +YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L S + +A+ +I E+ GI PD TY +I LC+ G + +A E+ D+ ++
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+V Y +++ G+CK ++A+ ++ M +G P+ TY ++I + G + +L
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 359 REMV 362
++V
Sbjct: 567 NDLV 570
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 166/333 (49%), Gaps = 47/333 (14%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
Q Q++G + +LK + C+ GN E+ ++ M+++G P+ + +
Sbjct: 80 QHSQSLGFRDTQMLK-----------IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCT 128
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
L+ G+ ++ + KA + ++ K G PDV +Y +ING CK+ +D+A ++LD M S+
Sbjct: 129 KLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 190 KIIADTICYNSLIDGLCKLGR-----------------------------------ISDA 214
DT+ YN +I LC G+ + +A
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
KL++EM RG PD+ TYN ++ +CK VD+A +++ ++ +G +PDV +Y IL+
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
L G+ ++ +++ + + + V Y+++I C++G +EA+ L+ M+ G PD
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
A +Y+ +I A +G D + L M++ G L
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYS-------------- 44
G A+E L + PD+V Y T++ +LCK+ A +++
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 45 ---------------------EMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
EM++ I P+ +TY S+I C G + +A LL +M
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
V T+NI++ CK +++A NV M+ G +PN +Y+ L++G +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 144 AKDIFNLMVK 153
A ++ N +V+
Sbjct: 562 AMELANDLVR 571
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 200/371 (53%), Gaps = 9/371 (2%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
E AL+L R + + PD VM++ +++ CK+ + A + Y M + RI P++V
Sbjct: 359 NELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLV 418
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF--NILVDALCKEGNVKEAKNVFAVM 116
++I G + A+ + N+ + H F N + CK+G V A + +M
Sbjct: 419 HTMIQGCLKAESPEAALEIFNDSFESWI---AHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
++G++PN V Y+++M +C +K ++ A+ IF+ M+++G+ P+ +Y+I+I+G K K
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV-NEMHHRGTPPDVITYNP 235
AW ++++M++ A+ + YN++I+GLCK+G+ S A +++ N + + +YN
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++D K + D A+ +E+ + G P+V T+T LI+G CK R+ A E+ ++
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
+ + AY +I+G+CK+ A L S++ G MP+ Y +I G+ D
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 356 KLLREMVARGL 366
L ++MV G+
Sbjct: 716 DLYKKMVNDGI 726
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 201/367 (54%), Gaps = 1/367 (0%)
Query: 4 TSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
++ L+++ ++ ++P+VV Y ++ + C+ K + A ++SEM+ K + PN TY+ LI
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG-VK 122
GF Q A ++N+M + +N +++ LCK G +AK + ++K+
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
+ SY+S++DG+ V + + A + + M + G SP+V ++T +ING CK +D A ++
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
EM S ++ D Y +LIDG CK + A+ L +E+ G P+V YN L+
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+D AI L K++ + GI D+FTYT +IDGL K G + A +++ ++L G
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ V++NG K+G +A ++ +M+ P+ + Y +I +G ++ +L EM+
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
Query: 363 ARGLLYN 369
+G++++
Sbjct: 828 EKGIVHD 834
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L + L +P+ Y+ +ID K+K +A+D+ ++M A N V Y ++I G C V
Sbjct: 509 EMLEKGL-EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKV 567
Query: 69 GQLQQAVGLLNEMIL-KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
GQ +A +L +I KR + ++N ++D K G+ A + M + G PN V+
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT 627
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++SL++G+C ++ A ++ + M + D+ +Y +I+G CK + A+ L E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
++ + YNSLI G LG++ A L +M + G D+ TY ++D L K N++
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 747
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A L E+ D GI PD + +L++GL K G+ A ++ +++ K V Y+ +I
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
G+ +EG +EA L +M G + D + +++ EK
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 193/417 (46%), Gaps = 71/417 (17%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V D V ++ + +++ +A ++ ++++ P+ + ++ + C L A+
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294
Query: 76 GLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
LL EM K + T+ ++ A KEGN++EA V M+ G+ + ++ +SL++G
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
YC E+ KA D+FN M + G++PD +++++ CK +++A + M S +I
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 195 TICYNSLIDG----------------------------------LCKLGRISDAWKLVNE 220
++ +++I G CK G++ A +
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID------- 273
M +G P+V+ YN ++ C+ N+D A ++ E+ ++G++P+ FTY+ILID
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 274 ----------------------------GLCKVGRLKDAQEIFQDILI-KGYNVTVQAYT 304
GLCKVG+ A+E+ Q+++ K Y+++ +Y
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+I+G+ K G D A+ +M +G+ P+ VT+ +I + D ++ EM
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 152/278 (54%), Gaps = 4/278 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVM----YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV 56
+G+TS A E+L+ + + M Y +IID K A + Y EM PN V
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
T+TSLI GFC ++ A+ + +EM + +++ + L+D CK+ ++K A +F+ +
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ G+ PN Y+SL+ G+ + +++ A D++ MV G+S D+ +YT +I+GL K +
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+ A L E+ I+ D I + L++GL K G+ A K++ EM + P+V+ Y+ +
Sbjct: 747 NLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+ + N+++A L E+ ++GI D + +L+ G
Sbjct: 807 IAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 172/385 (44%), Gaps = 38/385 (9%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
+VM+ + +L + +V++ D S+ + P A Y L+ + ++ AV
Sbjct: 137 LVMFVSNNPTLIPNVMVNNLVD-SSKRFGFELTPRAFNY--LLNAYIRNKRMDYAVDCFG 193
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
M+ +++ V N ++ +L + + EAK ++ M+ GV + V+ LM +
Sbjct: 194 LMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRER 253
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICY 198
+ +A IF ++ RG PD +++ + CK + A LL EM + + A Y
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
S+I K G + +A ++++EM G P VI L++ CK + + KA+ L +++
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI--------------LIKG--------- 295
+G+ PD ++++++ CK ++ A E + + +I+G
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 296 ----YNVTVQ---AYTVMING----YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+N + + A+ M N +CK+G D A + + ME G P+ V Y ++ A
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 345 LFEKGENDKGEKLLREMVARGLLYN 369
D + EM+ +GL N
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPN 518
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 188/354 (53%), Gaps = 2/354 (0%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIPPNAVTYTSLIYGFCIVGQLQ 72
++K D + + T+ID LCK + +A +L M + +R PNAVTY LI G+C G+L+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
A +++ M + V T N +V +C+ + A F M K+GVK N V+Y +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
C V V KA + M++ G SPD + Y +I+GLC+++ +A ++++++
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
D + YN LI C ++++ +M G PD ITYN L+ K + + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LIKGYNVTVQAYTVMINGYC 311
++++++ G+ P V TY +ID C VG L +A ++F+D+ L N Y ++IN +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
K G +AL+L +M+ P+ TY + + L EK + + KL+ EMV +
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 192/362 (53%), Gaps = 15/362 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V P+ V T I SLCK+ + A+D+ S+++ + P A + +L+ C+ + +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--I 310
Query: 76 GLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVFAVMMKQG------VKPNT 125
+N+++LK +V++ T IL++ LCK V EA VF M + +K ++
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADS 370
Query: 126 VSYSSLMDGYCLVKEVNKAKDIF-NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+ +++L+DG C V + +A+++ + ++ P+ +Y +I+G C+ ++ A +++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M ++I + + N+++ G+C+ ++ A +M G +V+TY L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
NV+KA+ +++ + G PD Y LI GLC+V R DA + + + G+++ + AY
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++I +C + ++ +++ ME G+ PD++TY +I + + + E+++ +M
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 365 GL 366
GL
Sbjct: 611 GL 612
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 146/291 (50%), Gaps = 8/291 (2%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ ++ VK +VV Y T+I + C V A Y +M+ P+A Y +LI G C V +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
A+ ++ ++ +++ +N+L+ C + N ++ + M K+G KP++++Y++
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM--HS 188
L+ + K+ + + M + G+ P V +Y +I+ C + +DEA KL +M HS
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
K+ +T+ YN LI+ KLG A L EM + P+V TYN L L + +
Sbjct: 647 -KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+ L+ E+ +Q +P+ T IL++ L L ++ Q GY+V
Sbjct: 706 LLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ-----GYSVA 751
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 152/359 (42%), Gaps = 91/359 (25%)
Query: 32 KDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV- 90
+DKL+ LY K IP V LI F +G + Q+V ++ +R+D +
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSV-----LVYERLDSNMK 183
Query: 91 --HTFNILVDALCKEGNVKEAKNVFAVMM-KQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
N++VD L + G V +A V M+ K+ V P
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP------------------------ 219
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA--WKLLDEMHSEKIIADTICYNSLIDGL 205
P+ + I+++ + K +++ E L+ S + +++ I L
Sbjct: 220 ----------PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 206 CKLGRISDAWKLVNEMHHRGTP-----------------------------------PDV 230
CK R + AW +++++ TP PDV
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQ----DQG--IKPDVFTYTILIDGLCKVGRLKDA 284
+T L++ LCKS VD+A+ + ++++ D G IK D + LIDGLCKVGRLK+A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 285 QEIFQDILIKGYNV-TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+E+ + ++ V Y +I+GYC+ G + A ++S+M+ P+ VT I+
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 187/351 (53%), Gaps = 2/351 (0%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIPPNAVTYTSLIYGFCIVGQLQ 72
++K D + + T+ID LCK + +A +L M + +R PNAVTY LI G+C G+L+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
A +++ M + V T N +V +C+ + A F M K+GVK N V+Y +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
C V V KA + M++ G SPD + Y +I+GLC+++ +A ++++++
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
D + YN LI C ++++ +M G PD ITYN L+ K + + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LIKGYNVTVQAYTVMINGYC 311
++++++ G+ P V TY +ID C VG L +A ++F+D+ L N Y ++IN +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
K G +AL+L +M+ P+ TY + + L EK + + KL+ EMV
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 192/362 (53%), Gaps = 15/362 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V P+ V T I SLCK+ + A+D+ S+++ + P A + +L+ C+ + +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--I 310
Query: 76 GLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVFAVMMKQG------VKPNT 125
+N+++LK +V++ T IL++ LCK V EA VF M + +K ++
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADS 370
Query: 126 VSYSSLMDGYCLVKEVNKAKDIF-NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+ +++L+DG C V + +A+++ + ++ P+ +Y +I+G C+ ++ A +++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M ++I + + N+++ G+C+ ++ A +M G +V+TY L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
NV+KA+ +++ + G PD Y LI GLC+V R DA + + + G+++ + AY
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++I +C + ++ +++ ME G+ PD++TY +I + + + E+++ +M
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 365 GL 366
GL
Sbjct: 611 GL 612
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 4/278 (1%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A E++ R +KP+VV TI+ +C+ ++ A + +M + + N VTY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI+ C V +++A+ +M+ + + L+ LC+ +A V + +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G + ++Y+ L+ +C K ++ M K G PD +Y +I+ K K +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH-HRGTPPDVITYNPLL 237
+++++M + + Y ++ID C +G + +A KL +M H P+ + YN L+
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
+ K N +A++L +E++ + ++P+V TY L L
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 152/359 (42%), Gaps = 91/359 (25%)
Query: 32 KDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV- 90
+DKL+ LY K IP V LI F +G + Q+V ++ +R+D +
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSV-----LVYERLDSNMK 183
Query: 91 --HTFNILVDALCKEGNVKEAKNVFAVMM-KQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
N++VD L + G V +A V M+ K+ V P
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP------------------------ 219
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA--WKLLDEMHSEKIIADTICYNSLIDGL 205
P+ + I+++ + K +++ E L+ S + +++ I L
Sbjct: 220 ----------PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 206 CKLGRISDAWKLVNEMHHRGTP-----------------------------------PDV 230
CK R + AW +++++ TP PDV
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQ----DQG--IKPDVFTYTILIDGLCKVGRLKDA 284
+T L++ LCKS VD+A+ + ++++ D G IK D + LIDGLCKVGRLK+A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 285 QEIFQDILIKGYNV-TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+E+ + ++ V Y +I+GYC+ G + A ++S+M+ P+ VT I+
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 189/368 (51%), Gaps = 3/368 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ + A + +R L + P+VV YT +I LC+D + +A+ +Y +++ + + P+ VTY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SLI GFC G L+ L +MI +V + +LVD L K+G + A M+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
Q ++ N V ++SL+DG+C + ++A +F LM G+ PDV ++T ++ ++E
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A L M + D + Y +LID CK + + +L + M D+ N ++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
+L K H ++ A + + ++PD+ TY +I G C + RL +A+ IF+ + + +
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
T++I+ CK D A+ + S M G P+AVTY ++ + + + KL
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 359 REMVARGL 366
EM +G+
Sbjct: 730 EEMQEKGI 737
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 189/349 (54%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PDVV+Y ++D L K L+ A +M+ + I N V + SLI G+C + + +A+ +
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
M + + +V TF ++ EG ++EA +F M K G++P+ ++Y +L+D +C
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +F+LM + +S D+ ++I+ L K +++A K + + K+ D +
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++I G C L R+ +A ++ + P+ +T L+ VLCK++++D AI + +
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++G KP+ TY L+D K ++ + ++F+++ KG + ++ +Y+++I+G CK G D
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA + + + +PD V Y I+IR + G + L M+ G+
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE A +L + ++ ++PD++ Y+T+ID K ++ + L+S+ + K + + V +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+S I + G L A + M+ + + V T+ IL+ LC++G + EA ++ ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G++P+ V+YSSL+DG+C + ++ M+K G PDV Y ++++GL K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + +M + I + + +NSLIDG C+L R +A K+ M G PDV T+ ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK-----VG-------------- 279
V +++A+ L + G++PD Y LID CK +G
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 280 ----------------RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
R++DA + F +++ + Y MI GYC DEA +
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
++ + P+ VT I+I L + + D ++ M +G
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 174/345 (50%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+VV + T+I+ CK + A+DL+ M + I P+ + Y++LI G+ G L L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
++ + K + ++V F+ +D K G++ A V+ M+ QG+ PN V+Y+ L+ G C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +A ++ ++KRG+ P + +Y+ +I+G CK + + L ++M D +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y L+DGL K G + A + +M + +V+ +N L+D C+ + D+A+ + + +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
GIKPDV T+T ++ GRL++A +F + G AY +I+ +CK
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
L L M+ + D ++I LF+ + K ++
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 179/359 (49%), Gaps = 3/359 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSL-CKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+L R + V + ++D+L CK + V+ A D + ++ + V+ ++ G
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLS- 263
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V Q++ A LL+ ++ V TF L++ CK G + A ++F VM ++G++P+ ++
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
YS+L+DGY + +F+ + +GV DV ++ I+ K + A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ I + + Y LI GLC+ GRI +A+ + ++ RG P ++TY+ L+D CK N+
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
AL +++ G PDV Y +L+DGL K G + A +L + + V + +I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+G+C+ DEAL + M G PD T+ ++R +G ++ L M GL
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 125/234 (53%), Gaps = 6/234 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+L++R + D+ + +I L K + DA ++ ++ ++ P+ VTY ++I G+C
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ +L +A + + + T IL+ LCK ++ A +F++M ++G KPN V+
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y LMD + ++ + +F M ++G+SP + SY+III+GLCK VDEA + +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD------VITYNP 235
K++ D + Y LI G CK+GR+ +A L M G PD + YNP
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNP 822
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E ELL+ P+ V T +I LCK+ + A ++S M K PNAVTY L+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F ++ + L EM K + + +++I++D LCK G V EA N+F + +
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
P+ V+Y+ L+ GYC V + +A ++ M++ GV PD
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
LM+ C V+KA +IF + GV S ++N L VD D++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 191 IIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I + + ++D L G ++ A + RG +++ N +L L ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVA 270
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L+ + D G P+V T+ LI+G CK G + A ++F+ + +G + AY+ +I+G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
Y K G+ L S+ G D V + I + G+ + + M+ +G+ N
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 200/369 (54%), Gaps = 10/369 (2%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E +A + Q + D YT +++ L K+ V DA +++ EM K I P+ +Y LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
GF +G +Q+A + +EM+ + + V +N+L+ C+ G +++AK + M +G+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN V+Y +++DGYC ++ +A +F+ M +G+ PD YT +++G C++ V+ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM----HHRGTPPDVITYNPLLD 238
+ + + T +N+LI+ + K G+ +++N + R P+ +TYN ++D
Sbjct: 755 FG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LCK N++ A L ++Q+ + P V TYT L++G K+GR + +F + + G
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI-IIRAL---FEK-GENDK 353
Y+V+IN + KEG+ +AL L+ +M + + D I RAL F K GE +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 354 GEKLLREMV 362
EK++ MV
Sbjct: 934 AEKVMENMV 942
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 73/437 (16%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G+ L+ ++ Q + PD+ Y ++I L K K + +A EMV + PNA TY +
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 61 LIYGFCIVGQLQQA-------------------VGLLNEMILKRMDVEV----------- 90
I G+ + A GL+NE K +E
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 91 -----HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
T+ +L++ L K V +A+ +F M +G+ P+ SY L++G+ + + KA
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
IF+ MV+ G++P+V Y +++ G C+ +++A +LLDEM + + + + Y ++IDG
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI--------------- 250
CK G +++A++L +EM +G PD Y L+D C+ ++V++AI
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 251 ---ALIKEIQ--------------------DQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
ALI + D+ KP+ TY I+ID LCK G L+ A+E+
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
F + TV YT ++NGY K G E + + ++G PD + Y +II A +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 348 KGENDKGEKLLREMVAR 364
+G K L+ +M A+
Sbjct: 888 EGMTTKALVLVDQMFAK 904
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 183/354 (51%), Gaps = 2/354 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KP MY I + K+ ++ A L+ M+A + P A Y SLI G+C ++Q
Sbjct: 345 IKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL EM + + + +T+ +V +C G++ A N+ M+ G +PN V Y++L+ +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
A + M ++G++PD+ Y +I GL K K +DEA L EM + +
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y + I G + + A K V EM G P+ + L++ CK V +A + +
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ DQGI D TYT+L++GL K ++ DA+EIF+++ KG V +Y V+ING+ K G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+A ++ +M G P+ + Y +++ GE +K ++LL EM +GL N
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 11/357 (3%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+E+ +R +V Y T++ +C + AY++ EM+A PN V YT+LI F
Sbjct: 406 VEMKKRNIVISPYT-YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ A+ +L EM + + ++ +N L+ L K + EA++ M++ G+KPN +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y + + GY E A M + GV P+ T +IN CK V EA M
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ I+ D Y L++GL K ++ DA ++ EM +G PDV +Y L++ K N+
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
KA ++ E+ ++G+ P+V Y +L+ G C+ G ++ A+E+ ++ +KG + Y +I
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIII----------RALFEKGENDKG 354
+GYCK G EA L +M+ G +PD+ Y ++ RA+ G N KG
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 178/350 (50%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P Y ++I+ C++K V Y+L EM + I + TY +++ G C G L A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ EMI V + L+ + +A V M +QG+ P+ Y+SL+ G
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K +++A+ MV+ G+ P+ +Y I+G + A K + EM ++ + +
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
LI+ CK G++ +A M +G D TY L++ L K+ VD A + +E++
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+GI PDVF+Y +LI+G K+G ++ A IF +++ +G V Y +++ G+C+ G +
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+A L+ +M G P+AVTY II + G+ + +L EM +GL+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 186/364 (51%), Gaps = 3/364 (0%)
Query: 6 AALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
AL+L + K P Y +ID LCK K + DA L EM + + + TY+ LI
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G A GL++EM+ ++++ + ++ + + KEG +++AK +F M+ G+
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P +Y+SL++GYC K V + ++ M KR + +Y ++ G+C +D A+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+ EM + + + Y +LI + R DA +++ EM +G PD+ YN L+ L K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ +D+A + + E+ + G+KP+ FTY I G + A + +++ G
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
T +IN YCK+G EA + M G + DA TY +++ LF+ + D E++ REM
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 363 ARGL 366
+G+
Sbjct: 620 GKGI 623
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 165/344 (47%), Gaps = 43/344 (12%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R + + PDV Y +I+ K + A ++ EMV + + PN + Y L+ GFC G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+++A LL+EM +K + T+ ++D CK G++ EA +F M +G+ P++ Y++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 131 LMDGYCLVKEVNKAKDIF------------------NLMVKRGVS--------------- 157
L+DG C + +V +A IF N + K G +
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 158 -----PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
P+ +Y I+I+ LCK ++ A +L +M + ++ I Y SL++G K+GR +
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI-----KEIQDQGIKPDVFT 267
+ + + +E G PD I Y+ +++ K KA+ L+ K D G K + T
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
L+ G KVG ++ A+++ ++++ Y +IN C
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 50/394 (12%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDL---YSEMVAKRIPPNAV-TYTSLIYGFCIVGQL 71
+ P+VV+ S+ + K V D L ++ + ++++ + +++ L C G
Sbjct: 60 INPEVVL------SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113
Query: 72 QQAVGLLNEMILKRMDV-EVHT------------------FNILVDALCKEGNVKEAKNV 112
++A+ ++ MI + V EV + F IL D +G ++EA V
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
F+ M + P L+D ++ D++ MV+R V DV++Y ++I C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 173 IK---------------------MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
VD A KL + M + ++ Y+ LIDGLCK+ R+
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
DA L+ EM G D TY+ L+D L K N D A L+ E+ GI + Y
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I + K G ++ A+ +F ++ G QAY +I GYC+E + L+ +M+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ TY +++ + G+ D +++EM+A G
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 48/291 (16%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE A ELL VK P+ V Y TIID CK +++A+ L+ EM K + P++ Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 59 TSLIYGFCIVGQLQQAVGLL------------------------------NEMILKRMDV 88
T+L+ G C + +++A+ + E++ + MD
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 89 EVH--------TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
T+NI++D LCKEGN++ AK +F M + P ++Y+SL++GY +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD------ 194
+ +F+ + G+ PD Y++IIN K M +A L+D+M ++ + D
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
+ C +L+ G K+G + A K++ M PD T L++ C S N
Sbjct: 916 STC-RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 184/351 (52%), Gaps = 3/351 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD Y T++D LCK++ + +A L EM ++ P+ V Y LI G C G L + L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
++ M LK T+N L+ LC +G + +A ++ M+ PN V+Y +L++G
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ A + + M +RG + Y+++I+GL K +EA L +M + + +
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+ L+DGLC+ G+ ++A +++N M G P+ TY+ L+ K+ ++A+ + KE+
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
G + F Y++LIDGLC VGR+K+A ++ +L G AY+ +I G C G D
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 318 EALALISKM---ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
AL L +M E PD VTY I++ L + + + LL M+ RG
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 186/349 (53%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P+ + + +I +LCK + V A +++ M ++ P+ TY +L+ G C ++ +AV
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL+EM + +N+L+D LCK+G++ + M +G PN V+Y++L+ G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
CL +++KA + MV P+ +Y +INGL K + +A +LL M +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y+ LI GL K G+ +A L +M +G P+++ Y+ L+D LC+ ++A ++
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ G P+ +TY+ L+ G K G ++A ++++++ G + Y+V+I+G C G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
EA+ + SKM + G PD V Y II+ L G D KL EM+ +
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 185/342 (54%), Gaps = 9/342 (2%)
Query: 37 SDAYDLYSEMVAK-RIPPNAVTYTSLIYGFCIVGQLQ---QAVGLLNEMILK-RMDVEVH 91
S +D +++++ R+ + S I F G+ +AV L + M+ + R V
Sbjct: 90 SGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVK 149
Query: 92 TFNILVDALCKEGNVKEAKNVFAVM----MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
+FN +++ + EG + + M + PN +S++ ++ C ++ V++A ++
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
F M +R PD +Y +++GLCK + +DEA LLDEM SE + YN LIDGLCK
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
G ++ KLV+ M +G P+ +TYN L+ LC +DKA++L++ + P+ T
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
Y LI+GL K R DA + + +GY++ Y+V+I+G KEG +EA++L KM
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G P+ V Y +++ L +G+ ++ +++L M+A G L N
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 185/396 (46%), Gaps = 74/396 (18%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ ++ + P V+Y +ID LCK ++ L M K PN VTY +LI+G C+
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 68 VGQLQQAVGLLNEMI------------------------------LKRMD-----VEVHT 92
G+L +AV LL M+ L M+ + H
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
+++L+ L KEG +EA +++ M ++G KPN V YS L+DG C + N+AK+I N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
G P+ +Y+ ++ G K + +EA ++ EM + CY+ LIDGLC +GR+
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI---QDQGIKPDVFTYT 269
+A + ++M G PD + Y+ ++ LC ++D A+ L E+ ++ +PDV TY
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
IL+DGLC + A ++ +L +G CD
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRG--------------------CD------------ 572
Query: 330 GRMPDAVTYEIIIRALFEKGEN-DKGEKLLREMVAR 364
PD +T + L EK + DKG L E+V R
Sbjct: 573 ---PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 193/368 (52%), Gaps = 8/368 (2%)
Query: 7 ALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR----IPPNAVTY 58
A++L R + K V + ++++ + + L + Y +V I PN +++
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+I C + + +A+ + M ++ + +T+ L+D LCKE + EA + M
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G P+ V Y+ L+DG C ++ + + + M +G P+ +Y +I+GLC +D+
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A LL+ M S K I + + Y +LI+GL K R +DA +L++ M RG + Y+ L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L K ++A++L +++ ++G KP++ Y++L+DGLC+ G+ +A+EI ++ G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y+ ++ G+ K GLC+EA+ + +M+ +G + Y ++I L G + +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 359 REMVARGL 366
+M+ G+
Sbjct: 491 SKMLTIGI 498
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 196/376 (52%), Gaps = 8/376 (2%)
Query: 2 GETSAALELLRRQLVKPDVVM---YTTIIDSLCKDKLVSDAYDLYSEMVAK-RIPPNAVT 57
G+ + +LL R ++ V++ + + + K L A DL+ MV + R + +
Sbjct: 91 GDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKS 150
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVF 113
+ S++ G + + + ++ M++ + +FN+++ ALCK V A VF
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
M ++ P+ +Y +LMDG C + +++A + + M G SP Y ++I+GLCK
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+ KL+D M + + + + YN+LI GLC G++ A L+ M P+ +TY
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
L++ L K A+ L+ ++++G + Y++LI GL K G+ ++A +++ +
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
KG + Y+V+++G C+EG +EA ++++M +SG +P+A TY +++ F+ G ++
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 354 GEKLLREMVARGLLYN 369
++ +EM G N
Sbjct: 451 AVQVWKEMDKTGCSRN 466
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 141/276 (51%), Gaps = 27/276 (9%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A+ L R+ KP++V+Y+ ++D LC++ ++A ++ + M+A PNA TY
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+SL+ GF G ++AV + EM +++L+D LC G VKEA V++ M+
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV---KRGVSPDVQSYTIIINGLCKIKM 175
G+KP+TV+YSS++ G C + ++ A +++ M+ + PDV +Y I+++GLC K
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGL------CKLGR---------------ISDA 214
+ A LL+ M D I N+ ++ L C GR +S A
Sbjct: 556 ISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGA 615
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+V M + P T+ ++ +CK ++ AI
Sbjct: 616 CTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIP---PNAVTYTSLIYGFCIVGQLQ 72
+KPD V Y++II LC + A LY EM+ + P P+ VTY L+ G C+ +
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGN---------------------VKEAKN 111
+AV LLN M+ + D +V T N ++ L ++ N V A
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 112 VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
+ VM+ + + P T +++ ++ C K++N A D
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 190/364 (52%), Gaps = 8/364 (2%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E+S LEL +VV Y ++I+ V + M + + N VTYTSLI
Sbjct: 252 ESSLGLEL--------NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI 303
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G+C G +++A + + K++ + H + +L+D C+ G +++A V M++ GV+
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVR 363
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
NT +SL++GYC ++ +A+ IF+ M + PD +Y +++G C+ VDEA KL
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
D+M ++++ + YN L+ G ++G D L M RG D I+ + LL+ L K
Sbjct: 424 CDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ ++A+ L + + +G+ D T ++I GLCK+ ++ +A+EI ++ I VQ
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
Y + +GY K G EA A+ ME G P Y +I F+ +K L+ E+
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 363 ARGL 366
ARGL
Sbjct: 604 ARGL 607
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 184/365 (50%)
Query: 5 SAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
+ L L+ + V +VV YT++I CK L+ +A ++ + K++ + Y L+ G
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+C GQ++ AV + + MI + N L++ CK G + EA+ +F+ M +KP+
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+Y++L+DGYC V++A + + M ++ V P V +Y I++ G +I + L
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M + AD I ++L++ L KLG ++A KL + RG D IT N ++ LCK
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
V++A ++ + KP V TY L G KVG LK+A + + + KG T++ Y
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+I+G K ++ L+ ++ + G P TY +I G DK EM+ +
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 365 GLLYN 369
G+ N
Sbjct: 641 GITLN 645
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 167/296 (56%), Gaps = 3/296 (1%)
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ--GVKPNTVSYSSL 131
A+ + ++MI + +V T +I+V+A C+ GNV +A VFA + G++ N V+Y+SL
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSL 267
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
++GY ++ +V + LM +RGVS +V +YT +I G CK +++EA + + + +K+
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+AD Y L+DG C+ G+I DA ++ + M G + N L++ CKS + +A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ + D +KPD TY L+DG C+ G + +A ++ + K TV Y +++ GY
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ G + L+L M G D ++ ++ ALF+ G+ ++ KL ++ARGLL
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 185/367 (50%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E ELL+ + + D MY ++D C+ + DA ++ M+ + N S
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G+C GQL +A + + M + + HT+N LVD C+ G V EA + M ++
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V P ++Y+ L+ GY + + ++ +M+KRGV+ D S + ++ L K+ +EA
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
KL + + + ++ DTI N +I GLCK+ ++++A ++++ ++ P V TY L
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K N+ +A A+ + ++ +GI P + Y LI G K L ++ ++ +G TV
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y +I G+C G+ D+A A +M G + I +LF + D+ LL++
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671
Query: 361 MVARGLL 367
+V LL
Sbjct: 672 IVDFDLL 678
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 198/428 (46%), Gaps = 74/428 (17%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPD Y T++D C+ V +A L +M K + P +TY L+ G+ +G +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L M+ + ++ + + + L++AL K G+ EA ++ ++ +G+ +T++ + ++ G
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 136 CLVKEVNKAKDIFN-----------------------------------LMVKRGVSPDV 160
C +++VN+AK+I + M ++G+ P +
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 576
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+ Y +I+G K + +++ L+ E+ + + Y +LI G C +G I A+ E
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD--------QGIK---------- 262
M +G +V + + + L + +D+A L+++I D Q +K
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTC 696
Query: 263 --------------------PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ- 301
P+ Y + I GLCK G+L+DA+++F D+L + +
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY 756
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
YT++I+G G ++A L +M G +P+ VTY +I+ L + G D+ ++LL ++
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKL 816
Query: 362 VARGLLYN 369
+G+ N
Sbjct: 817 PQKGITPN 824
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 188/399 (47%), Gaps = 41/399 (10%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+++ ++ V D + +T++++L K ++A L+ ++A+ + + +T +I G C +
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ +A +L+ + + R V T+ L K GN+KEA V M ++G+ P Y
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ G + +NK D+ + RG++P V +Y +I G C I M+D+A+ EM
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIE 639
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKL------------------------------- 217
+ I + + + + L +L +I +A L
Sbjct: 640 KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Query: 218 --VNEMHHRGTP-----PDVITYNPLLDVLCKSHNVDKAIALIKEI--QDQGIKPDVFTY 268
+ E TP P+ I YN + LCK+ ++ A L ++ D+ I PD +TY
Sbjct: 700 QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI-PDEYTY 758
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
TILI G G + A + ++ +KG + Y +I G CK G D A L+ K+
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
G P+A+TY +I L + G + +L +M+ +GL+
Sbjct: 819 KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 159/308 (51%), Gaps = 22/308 (7%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E A E + R+ + P + MY T+I K + ++ DL E+ A+ + P TY +
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G+C +G + +A EMI K + + V+ + + ++L + + EA ++ Q
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA-----CLLLQK 671
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKA------------KDIFNLMVKRGVSPDVQSYTIIIN 168
+ V + L+ GY +KE +A + + N K+ + P+ Y + I
Sbjct: 672 I----VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 169 GLCKIKMVDEAWKLL-DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
GLCK +++A KL D + S++ I D Y LI G G I+ A+ L +EM +G
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
P+++TYN L+ LCK NVD+A L+ ++ +GI P+ TY LIDGL K G + +A +
Sbjct: 788 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Query: 288 FQDILIKG 295
+ ++ KG
Sbjct: 848 KEKMIEKG 855
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 164/351 (46%), Gaps = 20/351 (5%)
Query: 12 RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL 71
++Q +PD Y ++ L + + E+VA + ++ GF + G+L
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVA-------LNHS----GFVVWGEL 144
Query: 72 QQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSL 131
+ + K F++++ ++G VK A +VF M G P+ +S +SL
Sbjct: 145 VR--------VFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-K 190
+ E A +++ M+ VSPDV + +I++N C+ VD+A E S
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ + + YNSLI+G +G + +++ M RG +V+TY L+ CK +++A
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ + ++++ + D Y +L+DG C+ G+++DA + +++ G +INGY
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
CK G EA + S+M PD TY ++ G D+ KL +M
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILI 272
A + ++M PDV T + +++ C+S NVDKA+ KE + G++ +V TY LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+G +G ++ + + + +G + V YT +I GYCK+GL +EA + ++ +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
D Y +++ G+ ++ M+ G+ N
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 192/358 (53%), Gaps = 1/358 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E +++ + D+ Y+++I LC V A +++E+ ++ + VTY +++ GFC
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G++++++ L M K V + ++NIL+ L + G + EA ++ +M +G + +Y
Sbjct: 339 GKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ G C+ VNKA + + G DV +Y II+ LCK K ++EA L+ EM
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ ++ N+LI GL + R+ +A + EM G P V++YN L+ LCK+ +
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A A +KE+ + G KPD+ TY+IL+ GLC+ ++ A E++ L G V + ++I+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G C G D+A+ +++ ME + VTY ++ F+ G++++ + M GL
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 5/368 (1%)
Query: 6 AALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
A+EL R L V P+V + +I L K V D ++ M + TY+SL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I+G C G + +A + NE+ ++ ++V T+N ++ C+ G +KE+ ++ +M +
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
N VSY+ L+ G ++++A I+ LM +G + D +Y I I+GLC V++A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
++ E+ S D Y S+ID LCK R+ +A LV EM G + N L+ L
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ + +A ++E+ G +P V +Y ILI GLCK G+ +A +++L G+ ++
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y++++ G C++ D AL L + SG D + + I+I L G+ D ++ M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 362 VARGLLYN 369
R N
Sbjct: 596 EHRNCTAN 603
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 187/362 (51%), Gaps = 8/362 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ + ++ KPDV Y+T+I+ L K + DA +L+ EM + + P+ Y LI GF
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 68 VGQLQQAVGLLNEMIL-KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
+ A+ L + ++ + V T NI++ L K G V + ++ M + + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC---KIKMVDEAWKLL 183
+YSSL+ G C V+KA+ +FN + +R S DV +Y ++ G C KIK E W+++
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
+ +S I++ YN LI GL + G+I +A + M +G D TY + LC +
Sbjct: 352 EHKNSVNIVS----YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
V+KA+ +++E++ G DV+ Y +ID LCK RL++A + +++ G +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
+I G ++ EA + +M +G P V+Y I+I L + G+ + ++EM+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 364 RG 365
G
Sbjct: 528 NG 529
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 191/368 (51%), Gaps = 6/368 (1%)
Query: 7 ALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
AL++ +R +P + Y T++++ + K L++ + PN TY LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
C + ++A G L+ M + +V +++ +++ L K G + +A +F M ++GV
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFN-LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
P+ Y+ L+DG+ K+ A ++++ L+ V P+V+++ I+I+GL K VD+ K
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ + M + D Y+SLI GLC G + A + NE+ R DV+TYN +L C
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ + +++ L + I + ++ +Y ILI GL + G++ +A I++ + KGY
Sbjct: 337 RCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKT 395
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y + I+G C G ++AL ++ ++ESSG D Y II L +K ++ L++EM
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 362 VARGLLYN 369
G+ N
Sbjct: 456 SKHGVELN 463
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 165/343 (48%), Gaps = 37/343 (10%)
Query: 2 GETSAALELLRRQLVKP--DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
G+ +LEL R K ++V Y +I L ++ + +A ++ M AK + TY
Sbjct: 339 GKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
I+G C+ G + +A+G++ E+ ++V+ + ++D LCK+ ++EA N+ M K
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 120 GV-----------------------------------KPNTVSYSSLMDGYCLVKEVNKA 144
GV +P VSY+ L+ G C + +A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
M++ G PD+++Y+I++ GLC+ + +D A +L + + D + +N LI G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
LC +G++ DA ++ M HR +++TYN L++ K + ++A + + G++PD
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+ +Y ++ GLC + A E F D G TV + +++
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 38/295 (12%)
Query: 108 EAKNVFAVMMK-QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTII 166
+A +VF M + G +P SY++L++ + K+ K + +F GV+P++Q+Y ++
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
I CK K ++A LD M E D Y+++I+ L K G++ DA +L +EM RG
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 227 PPDVITYNPLLDVL-------------------------CKSHN-----------VDKAI 250
PDV YN L+D K+HN VD +
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ + ++ + D++TY+ LI GLC G + A+ +F ++ + ++ V Y M+ G+
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
C+ G E+L L ME + + V+Y I+I+ L E G+ D+ + R M A+G
Sbjct: 336 CRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+GE S L + + +P VV Y +I LCK +A EM+ P+ TY+
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
L+ G C ++ A+ L ++ + ++ +V NIL+ LC G + +A V A M +
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
N V+Y++LM+G+ V + N+A I+ M K G+ PD+ SY I+ GLC + V A
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659
Query: 181 KLLDEMHSEKIIADTICYNSLI 202
+ D+ + I +N L+
Sbjct: 660 EFFDDARNHGIFPTVYTWNILV 681
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
G + Y I+ L + +MV+ ++++ + S++ D S+I K A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 215 WKLVNEMHH-RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ M G P + +YN LL+ ++ K +L + G+ P++ TY +LI
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
CK + A+ + +G+ V +Y+ +IN K G D+AL L +M G P
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
D Y I+I ++ ++ +L ++ +Y
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 180/340 (52%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
L+++++ V + V YT +++ K+ +SDA L+ EM + I + YTSLI
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
C G +++A L +E+ K + +T+ L+D +CK G + A+ + M +GV
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V +++L+DGYC V++A I+++M ++G DV + I + ++K DEA + L
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M + T+ Y +LID CK G + +A +L EM +G P+ ITYN ++ CK
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ +A L ++ G+ PD +TYT LI G C + +A +F ++ +KG + YTV
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
MI+G K G DEA L +M+ G D Y +I ++
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 195/367 (53%), Gaps = 3/367 (0%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE + +L++ + +KP+ Y TII++ K + S + M + N VTY
Sbjct: 238 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTY 297
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T L+ G++ A L +EM + ++ +VH + L+ C++GN+K A +F + +
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P++ +Y +L+DG C V E+ A+ + N M +GV+ + +I+G C+ MVDE
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + D M + AD N++ +L R +A + + M G ++Y L+D
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
V CK NV++A L E+ +G++P+ TY ++I CK G++K+A+++ ++ G +
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
YT +I+G C DEA+ L S+M G ++VTY ++I L + G++D+ L
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 359 REMVARG 365
EM +G
Sbjct: 598 DEMKRKG 604
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 171/307 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M + + +R + ++ DV +YT++I C+ + A+ L+ E+ K + P++ TY +
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G C VG++ A L+NEM K +++ FN L+D C++G V EA ++ VM ++G
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ + + +++ + +K ++AK M++ GV SYT +I+ CK V+EA
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+L EM S+ + + I YN +I CK G+I +A KL M G PD TY L+
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
C + NVD+A+ L E+ +G+ + TYT++I GL K G+ +A ++ ++ KGY +
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 301 QAYTVMI 307
+ YT +I
Sbjct: 610 KVYTALI 616
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 184/365 (50%), Gaps = 3/365 (0%)
Query: 8 LELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
LE+ RR + VK V T +++ LC+ V + L E K I P A TY ++I
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ G+L M + T+ +L++ K G + +A+ +F M ++G++ +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
Y+SL+ C + +A +F+ + ++G+SP +Y +I+G+CK+ + A L++
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
EM S+ + + +N+LIDG C+ G + +A + + M +G DV T N + +
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
D+A + + + G+K +YT LID CK G +++A+ +F ++ KG Y
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
VMI YCK+G EA L + ME++G PD+ TY +I D+ +L EM +
Sbjct: 509 VMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 365 GLLYN 369
GL N
Sbjct: 569 GLDQN 573
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G ++ + + + M+ K + ++ + + + A K + +F M+ GVK S
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ +++G C EV K+K + +G+ P+ +Y IIN K + +L M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ ++ + + Y L++ K G++SDA KL +EM RG DV Y L+ C+ N+ +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L E+ ++G+ P +TY LIDG+CKVG + A+ + ++ KG N+T + +I+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
GYC++G+ DEA + ME G D T I D+ ++ L M+ G+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E S +++ ++ + DV TI + K +A M+ + + V+YT+LI
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLI 476
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+C G +++A L EM K + T+N+++ A CK+G +KEA+ + A M G+
Sbjct: 477 DVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD 536
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P++ +Y+SL+ G C+ V++A +F+ M +G+ + +YT++I+GL K DEA+ L
Sbjct: 537 PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Query: 183 LDEMHSEKIIADTICYNSLIDGL 205
DEM + D Y +LI +
Sbjct: 597 YDEMKRKGYTIDNKVYTALIGSM 619
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
+G+ D + + + K R+ EIF+ ++ G +TV + T+++ G C+ G ++
Sbjct: 183 KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEK 242
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ LI + G P+A TY II A ++ + E +L+ M G++YN
Sbjct: 243 SKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYN 293
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 193/349 (55%), Gaps = 6/349 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P++V YTT++ +LC+ V + DL + + + V Y++ I+G+ G L A+
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM+ K M+ +V +++IL+D L KEGNV+EA + M+K+GV+PN ++Y++++ G C
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++ +A +FN ++ G+ D Y +I+G+C+ ++ A+ +L +M I +
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++I+GLC GR+S+A ++ +G DVITY+ LLD K N+D + + +
Sbjct: 385 YNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ I D+ IL+ +G +A +++ + Y MI GYCK G +
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EAL + +++ S + AV Y II AL +KG D ++L E+ +GL
Sbjct: 500 EALEMFNELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 193/405 (47%), Gaps = 55/405 (13%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
GE A + + PD Y T+I CK + +A ++++E+ + AV Y +
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRI 522
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDA---------------------- 99
I C G L A +L E+ K + +++HT L+ +
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 100 -------------LCKEGNVKEAKNVFAVMMKQGVK---PNTVSYSSLMDGYCLVKEVNK 143
LCK G+ + A V+ +M ++G+ P+T+ +L+D +
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNL-------R 634
Query: 144 AKDIFNLMVKRG----VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ D + L+V G S DV YTIIINGLCK + +A L S + +TI YN
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
SLI+GLC+ G + +A +L + + + G P +TY L+D LCK A L+ + +
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV--MINGYCKEGLCD 317
G+ P++ Y ++DG CK+G+ +DA + ++ VT A+TV MI GYCK+G +
Sbjct: 755 GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMG--RVTPDAFTVSSMIKGYCKKGDME 812
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
EAL++ ++ + D + +I+ KG ++ LLREM+
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 209/485 (43%), Gaps = 135/485 (27%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DVV Y+ +ID L K+ V +A L +M+ + + PN +TYT++I G C +G+L++A L
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP-----NTV------- 126
N ++ ++V+ + L+D +C++GN+ A ++ M ++G++P NTV
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 127 ------------------SYSSLMDGYCLVKEVN-------------------------- 142
+YS+L+D Y V+ ++
Sbjct: 396 GRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLK 455
Query: 143 ---------KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
+A ++ M + ++PD +Y +I G CK ++EA ++ +E+ + A
Sbjct: 456 AFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA 515
Query: 194 DTICYNSLIDGLCKLGRISDA-------WK------------LVNEMHHRGTPPDVI--- 231
+CYN +ID LCK G + A W+ L++ +H G ++
Sbjct: 516 -AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
Query: 232 -------------TYNPLLDVLCKSHNVDKAIALIKEIQDQGI----------------- 261
N + +LCK + + AI + ++ +G+
Sbjct: 575 YGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 262 -----------------KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
DV YTI+I+GLCK G L A + +G + Y
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+ING C++G EAL L +E+ G +P VTY I+I L ++G EKLL MV++
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 365 GLLYN 369
GL+ N
Sbjct: 755 GLVPN 759
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 172/347 (49%), Gaps = 43/347 (12%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF--NILVDALCKEGNVKEAK 110
P+++T+ SLIY F G++ A+ +L M K ++ F + ++ CK G + A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 111 NVFAVMMKQGV-KPNTVSYSSLMDGYCLVKEVNKAKDI--------FNL----------- 150
F + GV PN V+Y++L+ C + +V++ +D+ F
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 151 ----------------MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
MV++G++ DV SY+I+I+GL K V+EA LL +M E + +
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
I Y ++I GLCK+G++ +A+ L N + G D Y L+D +C+ N+++A +++
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+++ +GI+P + TY +I+GLC GR+ +A E+ KG V Y+ +++ Y K
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQ 426
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
D L + + + D V I+++A G + + L R M
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 174/329 (52%), Gaps = 19/329 (5%)
Query: 30 LCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL-----NEMILK 84
LCK A ++Y M K + VT+ S I +V L+ L E L
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILK-TLVDNLRSLDAYLLVVNAGETTLS 651
Query: 85 RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
MDV +T I+++ LCKEG + +A N+ + +GV NT++Y+SL++G C + +A
Sbjct: 652 SMDVIDYT--IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
+F+ + G+ P +Y I+I+ LCK + +A KLLD M S+ ++ + I YNS++DG
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
CKLG+ DA ++V+ PD T + ++ CK ++++A+++ E +D+ I D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL-ALI 323
F + LI G C GR+++A+ + +++L+ ++ +IN E E++ +
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVS------ESVVKLINRVDAELAESESIRGFL 883
Query: 324 SKMESSGRMPDAV-TYEIIIRALFEKGEN 351
++ GR+P A+ + I ++ G+N
Sbjct: 884 VELCEQGRVPQAIKILDEISSTIYPSGKN 912
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 28/293 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V + + Y ++I+ LC+ + +A L+ + + P+ VTY LI C G A
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL+ M+ K + + +N +VD CK G ++A V + M V P+ + SS++ GY
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH-SEKII-- 192
C ++ +A +F + +S D + +I G C ++EA LL EM SE ++
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKL 865
Query: 193 --------ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
A++ + LC+ GR+ A K+++E+ P K+
Sbjct: 866 INRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSG------------KNL 913
Query: 245 NVDKAIALIKEIQDQGIKP-----DVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ + + ++ ++ IK D + + LC G+L+ A E +L
Sbjct: 914 GSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVL 966
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
Query: 1 MGETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+T A+ ++ R++ V PD +++I CK + +A +++E K I +
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEM--------ILKRMDVEV---HTFNILVDALCKEGNV 106
+ LI GFC G++++A GLL EM ++ R+D E+ + + LC++G V
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRV 892
Query: 107 KEA 109
+A
Sbjct: 893 PQA 895
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 181/321 (56%), Gaps = 1/321 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y+T++D LC+ + + DA K I P+ V++ S++ G+C +G + A ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ V++ NIL++ LC G++ EA + + M K GV+P++V+Y+ L G+ L+ ++
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS-L 201
A ++ M+ +G+SPDV +YTI++ G C++ +D LL +M S ++I S +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ GLCK GRI +A L N+M G PD++ Y+ ++ LCK D A+ L E+ D+ I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P+ T+ L+ GLC+ G L +A+ + ++ G + + Y ++I+GY K G +EAL
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 322 LISKMESSGRMPDAVTYEIII 342
L + +G P T+ +I
Sbjct: 490 LFKVVIETGITPSVATFNSLI 510
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 191/346 (55%), Gaps = 1/346 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + +I+ LC +++A +L S+M + P++VTY L GF ++G + A +
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM-DGYC 136
+ +M+ K + +V T+ IL+ C+ GN+ + M+ +G + N++ S+M G C
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+++A +FN M G+SPD+ +Y+I+I+GLCK+ D A L DEM ++I+ ++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+ +L+ GLC+ G + +A L++ + G D++ YN ++D KS +++A+ L K +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ GI P V T+ LI G CK + +A++I I + G +V +YT +++ Y G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
L +M++ G P VTY +I + L +++ +LRE +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 188/342 (54%), Gaps = 13/342 (3%)
Query: 34 KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF 93
++V D+ + +M + + + +Y S++Y F + + ++ + D HT+
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTY 190
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
+ +VD LC++ +++A + + P+ VS++S+M GYC + V+ AK F ++K
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
G+ P V S+ I+INGLC + + EA +L +M+ + D++ YN L G LG IS
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD-VFTYTILI 272
AW+++ +M +G PDVITY LL C+ N+D + L+K++ +G + + + ++++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
GLCK GR+ +A +F + G + + AY+++I+G CK G D AL L +M +
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG-----LLYN 369
P++ T+ ++ L +KG + LL +++ G +LYN
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 47/347 (13%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PD+V Y+ +I LCK A LY EM KRI PN+ T+ +L+ G C G L +A
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL+ +I +++ +NI++D K G ++EA +F V+++ G+ P+ +++SL+ GY
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYT------------------------------- 164
C + + +A+ I +++ G++P V SYT
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 165 ----IIINGLCK------------IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
+I GLC+ ++ ++ + L +M SE I D I YN++I LC++
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
+S A+ + M R TYN L+D LC + KA + I +Q+Q + F Y
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
T LI C G + A ++F +L +G+NV+++ Y+ +IN C+ L
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 180/370 (48%), Gaps = 12/370 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L R ++ + ++ LCK + +A L+++M A + P+ V Y+ +I+G C +
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ A+ L +EM KR+ T L+ LC++G + EA+++ ++ G + V Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++DGY + +A ++F ++++ G++P V ++ +I G CK + + EA K+LD +
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + Y +L+D G +L EM G PP +TY+ + LC+ +
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 249 AIALIKE------------IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+++E ++ +GI PD TY +I LC+V L A + + +
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ + Y ++I+ C G +A + I ++ Y +I+A KG+ + K
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 357 LLREMVARGL 366
L +++ RG
Sbjct: 712 LFHQLLHRGF 721
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNS----------------------------LID 203
+++MVD++ +L +M + + T YNS ++D
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVD 195
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
GLC+ ++ DA + + P V+++N ++ CK VD A + + G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
V+++ ILI+GLC VG + +A E+ D+ G Y ++ G+ G+ A +I
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M G PD +TY I++ + G D G LL++M++RG N
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E L++++ + P VV YTT++D+ +L EM A+ IPP VTY+
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+ G C + + +L E I ++ CK+G M +G
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEK---------------CKQG--------LRDMESEG 615
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P+ ++Y++++ C VK ++ A +M R + +Y I+I+ LC + +A
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ + + + Y +LI C G A KL +++ HRG + Y+ +++ L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 241 CKSH 244
C+ H
Sbjct: 736 CRRH 739
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 181/321 (56%), Gaps = 1/321 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y+T++D LC+ + + DA K I P+ V++ S++ G+C +G + A ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ V++ NIL++ LC G++ EA + + M K GV+P++V+Y+ L G+ L+ ++
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS-L 201
A ++ M+ +G+SPDV +YTI++ G C++ +D LL +M S ++I S +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ GLCK GRI +A L N+M G PD++ Y+ ++ LCK D A+ L E+ D+ I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P+ T+ L+ GLC+ G L +A+ + ++ G + + Y ++I+GY K G +EAL
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 322 LISKMESSGRMPDAVTYEIII 342
L + +G P T+ +I
Sbjct: 490 LFKVVIETGITPSVATFNSLI 510
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 191/346 (55%), Gaps = 1/346 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + +I+ LC +++A +L S+M + P++VTY L GF ++G + A +
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM-DGYC 136
+ +M+ K + +V T+ IL+ C+ GN+ + M+ +G + N++ S+M G C
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+++A +FN M G+SPD+ +Y+I+I+GLCK+ D A L DEM ++I+ ++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+ +L+ GLC+ G + +A L++ + G D++ YN ++D KS +++A+ L K +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ GI P V T+ LI G CK + +A++I I + G +V +YT +++ Y G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
L +M++ G P VTY +I + L +++ +LRE +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 188/342 (54%), Gaps = 13/342 (3%)
Query: 34 KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTF 93
++V D+ + +M + + + +Y S++Y F + + ++ + D HT+
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTY 190
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
+ +VD LC++ +++A + + P+ VS++S+M GYC + V+ AK F ++K
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
G+ P V S+ I+INGLC + + EA +L +M+ + D++ YN L G LG IS
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD-VFTYTILI 272
AW+++ +M +G PDVITY LL C+ N+D + L+K++ +G + + + ++++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
GLCK GR+ +A +F + G + + AY+++I+G CK G D AL L +M +
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG-----LLYN 369
P++ T+ ++ L +KG + LL +++ G +LYN
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 47/347 (13%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PD+V Y+ +I LCK A LY EM KRI PN+ T+ +L+ G C G L +A
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL+ +I +++ +NI++D K G ++EA +F V+++ G+ P+ +++SL+ GY
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYT------------------------------- 164
C + + +A+ I +++ G++P V SYT
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 165 ----IIINGLCK------------IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
+I GLC+ ++ ++ + L +M SE I D I YN++I LC++
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
+S A+ + M R TYN L+D LC + KA + I +Q+Q + F Y
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
T LI C G + A ++F +L +G+NV+++ Y+ +IN C+ L
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 180/370 (48%), Gaps = 12/370 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L R ++ + ++ LCK + +A L+++M A + P+ V Y+ +I+G C +
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ A+ L +EM KR+ T L+ LC++G + EA+++ ++ G + V Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++DGY + +A ++F ++++ G++P V ++ +I G CK + + EA K+LD +
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + Y +L+D G +L EM G PP +TY+ + LC+ +
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 249 AIALIKE------------IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+++E ++ +GI PD TY +I LC+V L A + + +
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ + Y ++I+ C G +A + I ++ Y +I+A KG+ + K
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 357 LLREMVARGL 366
L +++ RG
Sbjct: 712 LFHQLLHRGF 721
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNS----------------------------LID 203
+++MVD++ +L +M + + T YNS ++D
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVD 195
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
GLC+ ++ DA + + P V+++N ++ CK VD A + + G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
V+++ ILI+GLC VG + +A E+ D+ G Y ++ G+ G+ A +I
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M G PD +TY I++ + G D G LL++M++RG N
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E L++++ + P VV YTT++D+ +L EM A+ IPP VTY+
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+ G C + + +L E I ++ CK+G M +G
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEK---------------CKQG--------LRDMESEG 615
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P+ ++Y++++ C VK ++ A +M R + +Y I+I+ LC + +A
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ + + + Y +LI C G A KL +++ HRG + Y+ +++ L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 241 CKSH 244
C+ H
Sbjct: 736 CRRH 739
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 195/375 (52%), Gaps = 21/375 (5%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYTSL 61
E+ + +++ + P V+ + +++ L K A+DL+ EM + P++ T+ +L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG- 120
I GFC + +A + +M L + +V T+N ++D LC+ G VK A NV + M+K+
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 121 -VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
V PN VSY++L+ GYC+ +E+++A +F+ M+ RG+ P+ +Y +I GL + DE
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Query: 180 WKLL----DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+L D + D +N LI C G + A K+ EM + PD +Y+
Sbjct: 336 KDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGI-------KPDVFTYTILIDGLCKVGRLKDAQEIF 288
L+ LC + D+A L E+ ++ + KP Y + + LC G+ K A+++F
Sbjct: 394 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
Query: 289 QDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
+ ++ +G +Y +I G+C+EG A L+ M +PD TYE++I L +
Sbjct: 454 RQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKI 512
Query: 349 GE----NDKGEKLLR 359
GE +D +++LR
Sbjct: 513 GEALLAHDTLQRMLR 527
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 174/351 (49%), Gaps = 12/351 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+ R V PD + T+I+ CK+ +V +A+ ++ +M P+ VTY ++I G C
Sbjct: 198 EMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 69 GQLQQAVGLLNEMILKRMDVE--VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
G+++ A +L+ M+ K DV V ++ LV C + + EA VF M+ +G+KPN V
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 127 SYSSLMDGYCLVKEVNKAKDIF--NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+Y++L+ G ++ KDI +PD ++ I+I C +D A K+
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT-------PPDVITYNPLL 237
EM + K+ D+ Y+ LI LC A L NE+ + P YNP+
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
+ LC + +A + +++ +G++ D +Y LI G C+ G+ K A E+ +L + +
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 496
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
++ Y ++I+G K G A + +M S +P A T+ ++ L ++
Sbjct: 497 PDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 150/284 (52%), Gaps = 13/284 (4%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
FN L+ + G +E+ +F M + G+ P+ ++++SL+ A D+F+ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 153 KR-GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
+ GV+PD ++ +ING CK MVDEA+++ +M D + YN++IDGLC+ G++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 212 SDAWKLVNEMHHRGT--PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
A +++ M + T P+V++Y L+ C +D+A+ + ++ +G+KP+ TY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ------AYTVMINGYCKEGLCDEALALI 323
LI GL + R + +DILI G + + ++I +C G D A+ +
Sbjct: 321 TLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+M + PD+ +Y ++IR L + E D+ E L E+ + +L
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 20/325 (6%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ SLI + G Q++V L M + V TFN L+ L K G A ++F M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 118 KQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ GV P++ ++++L++G+C V++A IF M +PDV +Y II+GLC+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 177 DEAWKLLDEM--HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
A +L M + + + + Y +L+ G C I +A + ++M RG P+ +TYN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQG------IKPDVFTYTILIDGLCKVGRLKDAQEIF 288
L+ L ++H D+ IK+I G PD T+ ILI C G L A ++F
Sbjct: 321 TLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 289 QDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM-------PDAVTYEII 341
Q++L + +Y+V+I C D A L +++ + P A Y +
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 342 IRALFEKGENDKGEKLLREMVARGL 366
L G+ + EK+ R+++ RG+
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMKRGV 461
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 11/340 (3%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + +I + C + A ++ EM+ ++ P++ +Y+ LI C+ + +A L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 78 LNEMILKRMDVE-------VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
NE+ K + + +N + + LC G K+A+ VF +MK+GV+ + SY +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKT 469
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ G+C + A ++ LM++R PD+++Y ++I+GL KI A L M
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ ++S++ L K ++++ LV M + ++ ++ +L S +KA
Sbjct: 530 YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF 589
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+++ + D G + L+ LC+ +L DA + L K V + +I G
Sbjct: 590 LIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 646
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
CK EA +L +++ G + ++ AL G+
Sbjct: 647 CKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGK 686
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
T+S ++++ L+K F+ + +G S QS+ +++ L + + ++ A L
Sbjct: 65 TISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 185 EMHSEK---IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ + +NSLI G ++ KL M G P V+T+N LL +L
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILL 184
Query: 242 KSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K A L E++ G+ PD +T+ LI+G CK + +A IF+D+ + N V
Sbjct: 185 KRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDV 244
Query: 301 QAYTVMINGYCKEGLCDEALALISKM--ESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y +I+G C+ G A ++S M +++ P+ V+Y ++R K E D+ +
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Query: 359 REMVARGLLYN 369
+M++RGL N
Sbjct: 305 HDMLSRGLKPN 315
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 176/357 (49%), Gaps = 12/357 (3%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P++ + ++D L K SDA ++ +M + I PN VTYT LI G C G A L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM + N L+D CK G + EA + + K G YSSL+DG
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +A +++ M+K+ + PD+ YTI+I GL K +++A KLL M S+ I DT C
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN++I LC G + + L EM + PD T+ L+ +C++ V +A + EI+
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ--------DILIKGYNVTVQAYTVMING 309
G P V T+ LIDGLCK G LK+A+ + + ++ + +++ M+
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-- 493
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ G +A ++ +G PD V+Y ++I G+ D KLL + +GL
Sbjct: 494 --ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 177/346 (51%), Gaps = 5/346 (1%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+ +ID L +D + E+ + + ++ + LI + +G ++AV M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM- 153
Query: 83 LKRMDV--EVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
K D +V T+N+++ + +E A V+ M+K PN ++ LMDG
Sbjct: 154 -KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ A+ +F+ M RG+SP+ +YTI+I+GLC+ D+A KL EM + D++ +N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+L+DG CKLGR+ +A++L+ G + Y+ L+D L ++ +A L + +
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
IKPD+ YTILI GL K G+++DA ++ + KG + Y +I C GL +E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+L +M + PDA T+ I+I ++ G + E++ E+ G
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 165/297 (55%), Gaps = 11/297 (3%)
Query: 1 MGETSAALELLRRQLVKPDVVM-----YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNA 55
+G A ELLR L + D + Y+++ID L + + + A++LY+ M+ K I P+
Sbjct: 281 LGRMVEAFELLR--LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
+ YT LI G G+++ A+ LL+ M K + + + +N ++ ALC G ++E +++
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M + P+ +++ L+ C V +A++IF + K G SP V ++ +I+GLCK
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 176 VDEAWKLLDEMHSEK----IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+ EA LL +M + + + N D + + G I A++ + G+ PD++
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
+YN L++ C++ ++D A+ L+ +Q +G+ PD TY LI+GL +VGR ++A ++F
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 174/395 (44%), Gaps = 78/395 (19%)
Query: 5 SAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
+ A EL L +KPD+++YT +I L K + DA L S M +K I P+ Y ++
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I C G L++ L EM + T IL+ ++C+ G V+EA+ +F + K G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDI-----------------------FNLMVKRGV-- 156
P+ ++++L+DG C E+ +A+ + F+ MV+ G
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 157 --------------SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
SPD+ SY ++ING C+ +D A KLL+ + + + D++ YN+LI
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV---------------- 246
+GL ++GR +A+KL P V Y L+ C+ V
Sbjct: 560 NGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISC 617
Query: 247 ------------------DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
++A+ + E+ + + + YTI + GLC+ GR +A +F
Sbjct: 618 LDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVF 677
Query: 289 QDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
+ K VT + +I+G CK D A+ +
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 9/279 (3%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
F +++D L ++ + GV ++ + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDE-----AWKLLDEMHSEKIIADTICYNSLIDGLCK 207
+ PDV +Y +I+ ++ M +E A+ + +EM + + L+DGL K
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
GR SDA K+ ++M RG P+ +TY L+ LC+ + D A L E+Q G PD
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
+ L+DG CK+GR+ +A E+ + G+ + ++ Y+ +I+G + +A L + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
PD + Y I+I+ L + G+ + KLL M ++G+
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 172/328 (52%), Gaps = 1/328 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KP+ Y+ +ID ++ +A ++ + M + I N V Y ++I G C VGQ +A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 76 GLLNEMIL-KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
LL MI KR+ V ++N ++D KEG + A + M G+ PN ++Y+SLM+G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
C +++A ++ + M +GV D+ +Y +I+G CK ++ A L E+ E +
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
YNSLI G LG + A L +M G D+ TY L+D L K N+ A L
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
E+Q G+ PD YT++++GL K G+ ++F+++ V Y +I G+ +EG
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 315 LCDEALALISKMESSGRMPDAVTYEIII 342
DEA L +M G +PD T++I++
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 199/370 (53%), Gaps = 4/370 (1%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T A ELL + + + P+VV Y ++ C+ K + A ++S ++ K + PN TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+ LI G Q A+ ++N M ++V + +++ LCK G +A+ + A M++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 119 QG-VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ + + +SY+S++DG+ E++ A + M G+SP+V +YT ++NGLCK +D
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A ++ DEM ++ + D Y +LIDG CK + A L +E+ G P YN L+
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
N+ A+ L K++ G++ D+ TYT LIDGL K G L A E++ ++ G
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
YTV++NG K+G + + + +M+ + P+ + Y +I + +G D+ +L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 358 LREMVARGLL 367
EM+ +G+L
Sbjct: 817 HDEMLDKGIL 826
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 191/357 (53%), Gaps = 2/357 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ ++ P+ V ++ +I+ K+ + A + Y +M + P+ ++I G+ +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
++A+ L +E + V N ++ LCK+G EA + + M +G+ PN VSY++
Sbjct: 425 HEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
+M G+C K ++ A+ +F+ ++++G+ P+ +Y+I+I+G + A ++++ M S
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLV-NEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I + + Y ++I+GLCK+G+ S A +L+ N + + ++YN ++D K +D A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+A +E+ GI P+V TYT L++GLCK R+ A E+ ++ KG + + AY +I+G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+CK + A AL S++ G P Y +I G L ++M+ GL
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 159/286 (55%), Gaps = 6/286 (2%)
Query: 1 MGETSAALELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV 56
+G+TS A ELL + + + + Y +IID K+ + A Y EM I PN +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
TYTSL+ G C ++ QA+ + +EM K + +++ + L+D CK N++ A +F+ +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+++G+ P+ Y+SL+ G+ + + A D++ M+K G+ D+ +YT +I+GL K +
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
A +L EM + ++ D I Y +++GL K G+ K+ EM P+V+ YN +
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ + N+D+A L E+ D+GI PD T+ IL+ G +VG L+
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQ 844
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 171/362 (47%), Gaps = 37/362 (10%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+ ++L P YT++I + K + DA L EM++ I N V TSLI G C
Sbjct: 293 EMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKN 352
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
L A+ +L D + KE G PN+V++
Sbjct: 353 NDLVSAL-------------------VLFDKMEKE----------------GPSPNSVTF 377
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S L++ + E+ KA + + M G++P V II G K + +EA KL DE
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF- 436
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
E +A+ N+++ LCK G+ +A +L+++M RG P+V++YN ++ C+ N+D
Sbjct: 437 ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A + I ++G+KP+ +TY+ILIDG + ++A E+ + V Y +IN
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 309 GYCKEGLCDEALALISKMESSGRM-PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
G CK G +A L++ M R+ ++Y II F++GE D EM G+
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 368 YN 369
N
Sbjct: 617 PN 618
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
Query: 21 VMYTTIIDSLCKDKLVSDAYDLYSEMVA-KRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V+Y TII+ LCK S A +L + M+ KR+ + ++Y S+I GF G++ AV
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
EM + V T+ L++ LCK + +A + M +GVK + +Y +L+DG+C
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ A +F+ +++ G++P Y +I+G + + A L +M + + D Y
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+LIDGL K G + A +L EM G PD I Y +++ L K K + + +E++
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ P+V Y +I G + G L +A + ++L KG + ++++G
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 168/348 (48%), Gaps = 2/348 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+ ++++ KD+ A D+ ++M+ + P + L +A L + M+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+D + T +L+ A +E EA V + +++G +P+++ YS + C ++
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 143 KAKDIFNLMVKRGVS-PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
A + M ++ + P ++YT +I K +D+A +L DEM S+ I + + SL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
I G CK + A L ++M G P+ +T++ L++ K+ ++KA+ K+++ G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P VF +I G K + ++A ++F + G V +++ CK+G DEA
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATE 464
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L+SKMES G P+ V+Y ++ + D + ++ +GL N
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G + N+ +++ L++ Y ++ + A DI N M++ V P ++ L + + EA
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+L M + + D + L+ + + ++A ++++ RG PD + Y+ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 240 LCKSHNVDKAIALIKEIQDQGI-KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
CK+ ++ A +L++E++++ + P TYT +I K G + DA + ++L G ++
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V A T +I G+CK AL L KME G P++VT+ ++I + GE +K +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 359 REMVARGL 366
++M GL
Sbjct: 398 KKMEVLGL 405
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 173/336 (51%), Gaps = 9/336 (2%)
Query: 38 DAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILV 97
D+ ++ +M P+ Y +++ QL A M + V + N+L+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 98 DALCK-EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
ALC+ +G V +F M K+G P++ +Y +L+ G C +++AK +F MV++
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
+P V +YT +INGLC K VDEA + L+EM S+ I + Y+SL+DGLCK GR A +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
L M RG P+++TY L+ LCK + +A+ L+ + QG+KPD Y +I G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 277 KVGRLKDAQEIFQDILIKG-------YNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
+ + ++A ++++ G +N+ V+ ++ G C A L M S
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSR 402
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
G + T E +++ L +KGE K +L+ E+V G
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 143/272 (52%), Gaps = 9/272 (3%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE+ +R PD Y T+I LC+ + +A L++EMV K P VTYTSLI G C
Sbjct: 181 LEMPKRG-CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ +A+ L EM K ++ V T++ L+D LCK+G +A +F +MM +G +PN V+
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y++L+ G C +++ +A ++ + M +G+ PD Y +I+G C I EA LDEM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 188 SEKIIADTICYN-------SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
I + + +N ++ GLC S A+ L M RG +V T L+ L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
CK KA+ L+ EI G P T+ +LI
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 1/259 (0%)
Query: 112 VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
VF M P+ +Y +++ ++N A + M + G+ P V S ++I LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 172 KIK-MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
+ VD K+ EM D+ Y +LI GLC+ GRI +A KL EM + P V
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD 290
+TY L++ LC S NVD+A+ ++E++ +GI+P+VFTY+ L+DGLCK GR A E+F+
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 291 ILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
++ +G + YT +I G CKE EA+ L+ +M G PDA Y +I +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 351 NDKGEKLLREMVARGLLYN 369
+ L EM+ G+ N
Sbjct: 348 FREAANFLDEMILGGITPN 366
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 34/243 (13%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE ++ + ++P+V Y++++D LCKD A +L+ M+A+ PN VTYT+LI G C
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
++Q+AV LL+ M L+ + + + ++ C +EA N M+ G+ PN ++
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ N+ VK + ++ GLC A+ L M
Sbjct: 370 W--------------------NIHVK--------TSNEVVRGLCA-NYPSRAFTLYLSMR 400
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
S I + SL+ LCK G A +LV+E+ G P T+ L+ H +D
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI-----GHTLD 455
Query: 248 KAI 250
K I
Sbjct: 456 KTI 458
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 192/360 (53%), Gaps = 1/360 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E +R +KP + T +++SL K +L + ++ +MV + N Y L++
Sbjct: 156 FEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSK 215
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G ++A LL+EM K + ++ T+N L+ CK+ EA +V M + GV PN V+
Sbjct: 216 SGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVT 275
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+S + G+ + +A +F +K V+ + +YT +I+G C++ +DEA +L + M
Sbjct: 276 YNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVME 334
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
S + YNS++ LC+ GRI +A +L+ EM + PD IT N L++ CK ++
Sbjct: 335 SRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMV 394
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A+ + K++ + G+K D+++Y LI G CKV L++A+E ++ KG++ Y+ ++
Sbjct: 395 SAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLV 454
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+G+ + DE L+ + E G D Y +IR + + + D + L M +GL+
Sbjct: 455 DGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 175/361 (48%), Gaps = 5/361 (1%)
Query: 13 RQLVKPDVV----MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+++VK VV +Y ++ + K A L SEM K + P+ TY +LI +C
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+A+ + + M + + T+N + +EG ++EA +F +K V N V+Y
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTY 310
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+DGYC + ++++A + +M RG SP V +Y I+ LC+ + EA +LL EM
Sbjct: 311 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+KI D I N+LI+ CK+ + A K+ +M G D+ +Y L+ CK ++
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A + + ++G P TY+ L+DG + + ++ ++ +G V Y +I
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
CK D A L ME G + D+V + + A + G+ + L M R L+
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMV 550
Query: 369 N 369
N
Sbjct: 551 N 551
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 132/246 (53%), Gaps = 7/246 (2%)
Query: 123 PNTVS--YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P VS +S LM Y +N + +F + G+ P +Q+ T+++N L K ++ D W
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
K+ +M ++A+ YN L+ K G A KL++EM +G PD+ TYN L+ V
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL--IKGYNV 298
CK +A+++ ++ G+ P++ TY I G + GR+++A +F++I + +V
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV 308
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
T YT +I+GYC+ DEAL L MES G P VTY I+R L E G + +LL
Sbjct: 309 T---YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 359 REMVAR 364
EM +
Sbjct: 366 TEMSGK 371
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 164/339 (48%), Gaps = 7/339 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PD+ Y T+I CK + +A + M + PN VTY S I+GF G++++A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 76 GLLNEMILKRMDVEVH--TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
L E+ + DV + T+ L+D C+ ++ EA + VM +G P V+Y+S++
Sbjct: 294 RLFREI---KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
C + +A + M + + PD + +IN CKI+ + A K+ +M +
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D Y +LI G CK+ + +A + + M +G P TY+ L+D + D+ L+
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
+E + +G+ DV Y LI +CK+ ++ A+ +F+ + KG +T M Y +
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
G EA AL M + M + Y+ I + G+ND
Sbjct: 531 GKVTEASALFDVMYNRRLMVNLKLYKSISASY--AGDND 567
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 151/301 (50%), Gaps = 1/301 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ R V P++V Y + I ++ + +A L+ E + + N VTYT+LI G+C +
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMND 322
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+ +A+ L M + V T+N ++ LC++G ++EA + M + ++P+ ++ ++
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++ YC ++++ A + M++ G+ D+ SY +I+G CK+ ++ A + L M +
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
Y+ L+DG + + KL+ E RG DV Y L+ +CK VD A
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L + ++ +G+ D +T + + G++ +A +F + + V ++ Y + Y
Sbjct: 503 VLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Query: 311 C 311
Sbjct: 563 A 563
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 170/381 (44%), Gaps = 44/381 (11%)
Query: 26 IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT--YTSLIYGFCIVGQLQQAVGLLNEMIL 83
++D L + +L+S L S + P V+ ++ L+ + G + ++ + ++
Sbjct: 102 LLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS 161
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ + +L+++L K+ +F M+K GV N Y+ L+ + K
Sbjct: 162 CGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A+ + + M ++GV PD+ +Y +I+ CK M EA + D M + + + YNS I
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 204 GLCKLGRISDAWKLVNE----------------------------------MHHRGTPPD 229
G + GR+ +A +L E M RG P
Sbjct: 282 GFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
V+TYN +L LC+ + +A L+ E+ + I+PD T LI+ CK+ + A ++ +
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 290 DILIKGYNVTVQAYTVMINGYCK----EGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
++ G + + +Y +I+G+CK E +E ++I K G P TY ++
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK----GFSPGYATYSWLVDGF 457
Query: 346 FEKGENDKGEKLLREMVARGL 366
+ + + D+ KLL E RGL
Sbjct: 458 YNQNKQDEITKLLEEFEKRGL 478
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 2 GETSAALELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G A L R +K DV V YTT+ID C+ + +A L M ++ P VT
Sbjct: 287 GRMREATRLFRE--IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y S++ C G++++A LL EM K+++ + T N L++A CK ++ A V M+
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G+K + SY +L+ G+C V E+ AK+ M+++G SP +Y+ +++G D
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
E KLL+E + AD Y LI +CKL ++ A L M +G D + + +
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 238 DVLCKSHNVDKAIALI 253
++ V +A AL
Sbjct: 525 YAYWRTGKVTEASALF 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
+QS +I L K K A +LLD++ ++++ + SL+ G+ +
Sbjct: 79 SLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSE----------- 127
Query: 219 NEMHHRGTPPDVI-TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
P DV ++ L+ K+ ++ +I + ++I+ G+KP + T+L++ L K
Sbjct: 128 -------DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 278 VGRLKDA-QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
RL D +IF+ ++ G + Y V+++ K G ++A L+S+ME G PD
Sbjct: 181 -QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 337 TYEIII 342
TY +I
Sbjct: 240 TYNTLI 245
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 190/347 (54%), Gaps = 4/347 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P++ ++ +LCK + AY + E+ + + PN VTYT+++ G+ G ++ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L EM+ + + T+ +L+D CK G EA V M K ++PN V+Y ++
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C K+ +A+++F+ M++R PD +I+ LC+ VDEA L +M + D
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
++LI LCK GR+++A KL +E +G+ P ++TYN L+ +C+ + +A L +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ ++ KP+ FTY +LI+GL K G +K+ + +++L G + ++ G K G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
++A+ ++S +G++ D ++E+ ++ GE DKG L+E++
Sbjct: 486 EEDAMKIVSMAVMNGKV-DKESWELFLKKF--AGELDKGVLPLKELL 529
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 149/280 (53%), Gaps = 1/280 (0%)
Query: 90 VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
+ T N+LV ALCK+ +++ A V + G+ PN V+Y++++ GY ++ AK +
Sbjct: 191 IFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLE 250
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
M+ RG PD +YT++++G CK+ EA ++D+M +I + + Y +I LCK
Sbjct: 251 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
+ +A + +EM R PD ++D LC+ H VD+A L +++ PD +
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
LI LCK GR+ +A+++F D KG ++ Y +I G C++G EA L M
Sbjct: 371 TLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
P+A TY ++I L + G +G ++L EM+ G N
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 10/355 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-----IPPNAVTYTSLIYGFCIVGQ 70
VK V T+++ L +++ +DL M I PN T L+ C
Sbjct: 151 VKRSVRSLNTLLNVLIQNQ----RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKND 206
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
++ A +L+E+ + + T+ ++ G+++ AK V M+ +G P+ +Y+
Sbjct: 207 IESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
LMDGYC + ++A + + M K + P+ +Y ++I LCK K EA + DEM
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ D+ +ID LC+ ++ +A L +M PD + L+ LCK V +A
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L E + +G P + TY LI G+C+ G L +A ++ D+ + Y V+I G
Sbjct: 387 KLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGL 445
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
K G E + ++ +M G P+ T+ I+ L + G+ + K++ V G
Sbjct: 446 SKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 139/276 (50%), Gaps = 12/276 (4%)
Query: 94 NILVDALCK---EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
N+ +D L G + + +F + GVK + S ++L++ L++ N+ D+ +
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLN--VLIQ--NQRFDLVHA 176
Query: 151 MVKR-----GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
M K G++P++ + +++ LCK ++ A+K+LDE+ S ++ + + Y +++ G
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
G + A +++ EM RG PD TY L+D CK +A ++ +++ I+P+
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
TY ++I LCK + +A+ +F ++L + + +I+ C++ DEA L K
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M + MPD +I L ++G + KL E
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
E + ++ + + ++P+ V Y +I +LCK+K +A +++ EM+ + P++
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I C ++ +A GL +M+ + + L+ LCKEG V EA+ +F K G
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-G 395
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P+ ++Y++L+ G C E+ +A +++ M +R P+ +Y ++I GL K V E
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
++L+EM + + L +GL KLG+ DA K+V+
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 85/149 (57%)
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
N G P++ T N L+ LCK ++++ A ++ EI G+ P++ TYT ++ G
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
G ++ A+ + +++L +G+ YTV+++GYCK G EA ++ ME + P+ VTY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGLL 367
++IRAL ++ ++ + + EM+ R +
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFM 328
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 184/352 (52%), Gaps = 3/352 (0%)
Query: 1 MGETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ S ALE+ R + VK ++ Y+ +I+ K K ++A+ ++ +MV + + P+ +
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y ++I FC +G + +A+ + EM R TF ++ K G+++ + VF +M
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G P +++ L++G +++ KA +I + M GVS + +YT I+ G +
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A++ + +E + D Y +L+ CK GR+ A + EM R P + YN L+
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
D + +V +A LI++++ +G+KPD+ TYT I K G + A + +++ G
Sbjct: 737 DGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
++ YT +I G+ + L ++AL+ +M++ G PD Y ++ +L +
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 170/349 (48%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P VV Y +I+ K +S A ++ M + + N TY+ +I GF + A +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M+ + M +V +N ++ A C GN+ A M K +P T ++ ++ GY
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ ++ ++F++M + G P V ++ +INGL + + +++A ++LDEM + A+
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y ++ G +G A++ + + G D+ TY LL CKS + A+A+ KE+
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ I + F Y ILIDG + G + +A ++ Q + +G + YT I+ K G +
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
A I +ME+ G P+ TY +I+ +K EM A G+
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 185/371 (49%), Gaps = 4/371 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPP--NAVTY 58
M E + + ++ + ++ +V Y+ I+ K A + E AKRI NA Y
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE--AKRIHKTLNASIY 417
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+IY C +++A L+ EM + +D + ++ ++D + K+ VF + +
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G P V+Y L++ Y V +++KA ++ +M + GV ++++Y+++ING K+K
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A+ + ++M E + D I YN++I C +G + A + V EM P T+ P++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
KS ++ +++ + ++ G P V T+ LI+GL + +++ A EI ++ + G +
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
YT ++ GY G +A +++++ G D TYE +++A + G +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 359 REMVARGLLYN 369
+EM AR + N
Sbjct: 718 KEMSARNIPRN 728
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 3/293 (1%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G QAV E I K E F ++V + G++ A+ F M +G+ P + Y
Sbjct: 291 GDNWQAVISAFEKISKPSRTE---FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIY 347
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+SL+ Y + +++++A M + G+ + +Y++I+ G K + A DE
Sbjct: 348 TSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKR 407
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ Y +I C+ + A LV EM G + Y+ ++D + K
Sbjct: 408 IHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKK 467
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
+ + K +++ G P V TY LI+ KVG++ A E+ + + +G ++ Y++MIN
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
G+ K A A+ M G PD + Y II A G D+ + ++EM
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 192/363 (52%), Gaps = 5/363 (1%)
Query: 7 ALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYTSLI 62
A+ELL K PD V Y TI+ LCK+K + + DL +M + + P+ VTY +LI
Sbjct: 331 AIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG-V 121
+ +A+ L + K ++ ++ +V ALCKEG + EAK++ M+ +G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
P+ V+Y+++++G+C + EV+KAK + +M G P+ SYT ++NG+C+ EA +
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+++ ++I Y+ ++ GL + G++S+A +V EM +G P + N LL LC
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ +A ++E ++G +V +T +I G C+ L A + D+ + + V
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 630
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
YT +++ K+G EA L+ KM G P VTY +I + G+ D +L +M
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Query: 362 VAR 364
++R
Sbjct: 691 ISR 693
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 205/396 (51%), Gaps = 37/396 (9%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L++R V+P++++ T ID + + A M I PN VTY +I G+C
Sbjct: 265 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 324
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTV 126
+ ++++A+ LL +M K + ++ ++ LCKE + E +++ M K+ G+ P+ V
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 127 SYSSLMD----------------------------GY-------CLVKEVNKAKDIFNLM 151
+Y++L+ GY C +++AKD+ N M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 152 VKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
+ +G PDV +YT ++NG C++ VD+A KLL MH+ +T+ Y +L++G+C+ G+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+A +++N P+ ITY+ ++ L + + +A +++E+ +G P +
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
L+ LC+ GR +A++ ++ L KG + V +T +I+G+C+ D AL+++ M
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ D TY ++ L +KG + +L+++M+ +G+
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 185/342 (54%), Gaps = 3/342 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD V Y T+I L K +A + K + + Y+++++ C G++ +A L
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 78 LNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+NEM+ K +V T+ +V+ C+ G V +AK + VM G KPNTVSY++L++G C
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +A+++ N+ + SP+ +Y++I++GL + + EA ++ EM + +
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
N L+ LC+ GR +A K + E ++G +V+ + ++ C++ +D A++++ ++
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
DVFTYT L+D L K GR+ +A E+ + +L KG + T Y +I+ YC+ G
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKV 680
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
D+ +A++ KM S R Y +I L G+ ++ + LL
Sbjct: 681 DDLVAILEKMIS--RQKCRTIYNQVIEKLCVLGKLEEADTLL 720
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 185/364 (50%), Gaps = 2/364 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L++R+ + ++ ++ S + + DA + + M + PN + + I F
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+L++A+ L M + + V T+N ++ C V+EA + M +G P+ VS
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
Y ++M C K + + +D+ M K G+ PD +Y +I+ L K DEA L +
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT-PPDVITYNPLLDVLCKSHN 245
+ D + Y++++ LCK GR+S+A L+NEM +G PPDV+TY +++ C+
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
VDKA L++ + G KP+ +YT L++G+C+ G+ +A+E+ ++ Y+V
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+++G +EG EA ++ +M G P V +++++L G + K + E + +G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 366 LLYN 369
N
Sbjct: 590 CAIN 593
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 193/384 (50%), Gaps = 40/384 (10%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK-RIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
D + Y+ I+ +LCK+ +S+A DL +EM++K PP+ VTYT+++ GFC +G++ +A L
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L M ++ L++ +C+ G EA+ + + + PN+++YS +M G
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 138 VKEVNKAKDIFNLMVKRGVSP-----------------------------------DVQS 162
++++A D+ MV +G P +V +
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
+T +I+G C+ +D A +LD+M+ AD Y +L+D L K GRI++A +L+ +M
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALI-KEIQDQGIKPDVFTYTILIDGLCKVGRL 281
H+G P +TY ++ C+ VD +A++ K I Q + Y +I+ LC +G+L
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKL 713
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
++A + +L + ++ GY K+G+ A + +M + +PD E +
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
Query: 342 IRALFEKGENDKGEKLLREMVARG 365
+ L KG+ D+ +KL+ +V RG
Sbjct: 774 SKRLVLKGKVDEADKLMLRLVERG 797
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 184/360 (51%), Gaps = 6/360 (1%)
Query: 12 RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL 71
R+ + D ++Y ++++ L K KL + + M + I ++ ++ + GQL
Sbjct: 199 RQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQL 258
Query: 72 QQAVGLLNEMILKRMDVEVHTF--NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
+ A+ +L +++R VE + N +D + +++A M G+ PN V+Y+
Sbjct: 259 RDALKVLT--LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
++ GYC + V +A ++ M +G PD SY I+ LCK K + E L+ +M E
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 190 K-IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
++ D + YN+LI L K +A + + +G D + Y+ ++ LCK + +
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 249 AIALIKEIQDQG-IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A LI E+ +G PDV TYT +++G C++G + A+++ Q + G+ +YT ++
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
NG C+ G EA +++ E P+++TY +I+ L +G+ + ++REMV +G
Sbjct: 497 NGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 154/337 (45%), Gaps = 46/337 (13%)
Query: 1 MGETSAA---LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+GE A L+++ KP+ V YT +++ +C+ +A ++ + PN++T
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y+ +++G G+L +A ++ EM+LK N+L+ +LC++G EA+ +
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 118 KQGVKPNTVSYSSLMDGYCLVKE-------------VNKAKDIFNL-------------- 150
+G N V++++++ G+C E +NK D+F
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 151 --------MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC---YN 199
M+ +G+ P +Y +I+ C++ VD+ +L EK+I+ C YN
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL-----EKMISRQKCRTIYN 701
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+I+ LC LG++ +A L+ ++ + D T L++ K A + + ++
Sbjct: 702 QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNR 761
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+ PDV L L G++ +A ++ ++ +G+
Sbjct: 762 NLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGH 798
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 32/389 (8%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R +K +V + +I+ LCK+ + A M I P VTY +L+ GF + G+++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGN----VKEAKNV---------------- 112
A +++EM K ++ T+N ++ +C EG ++E K +
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 113 ---------FAV---MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
FA M+KQG+ P +Y++L+ G + ++ A+ + + ++G+ D
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+Y I+ING C+ +A+ L DEM ++ I Y SLI LC+ + +A +L +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
+ +G PD++ N L+D C N+D+A +L+KE+ I PD TY L+ GLC G+
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++A+E+ ++ +G +Y +I+GY K+G A + +M S G P +TY
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 341 IIRALFEKGENDKGEKLLREMVARGLLYN 369
+++ L + E + E+LLREM + G++ N
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 191/391 (48%), Gaps = 32/391 (8%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L +L +++ ++ C+ ++V +A + + M K P T ++
Sbjct: 143 LVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSR 202
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ +++ A +M + V+TFNI+++ LCKEG +K+AK +M G+KP V+
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE--------- 178
Y++L+ G+ L + A+ I + M +G PD+Q+Y I++ +C E
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIG 322
Query: 179 -----------------------AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
A+ DEM + ++ YN+LI GL +I A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
L+ E+ +G D +TYN L++ C+ + KA AL E+ GI+P FTYT LI L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C+ + ++A E+F+ ++ KG + +++G+C G D A +L+ +M+ PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGL 366
VTY ++R L +G+ ++ +L+ EM RG+
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 178/335 (53%), Gaps = 3/335 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ + +PD+ Y I+ +C + A ++ EM + P++V+Y LI G G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L+ A +EM+ + M +T+N L+ L E ++ A+ + + ++G+ ++V+Y+
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++GYC + KA + + M+ G+ P +YT +I LC+ EA +L +++ +
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ D + N+L+DG C +G + A+ L+ EM PD +TYN L+ LC ++A
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L+ E++ +GIKPD +Y LI G K G K A + ++L G+N T+ Y ++ G
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
K + A L+ +M+S G +P+ ++ +I A+
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G S L ++ + PD V Y +I + + A+ EMV + + P TY +L
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I+G + +++ A L+ E+ K + ++ T+NIL++ C+ G+ K+A + MM G+
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+P +Y+SL+ C + +A ++F +V +G+ PD+ +++G C I +D A+
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
LL EM I D + YN L+ GLC G+ +A +L+ EM RG PD I+YN L+
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
K + A + E+ G P + TY L+ GL K + A+E+ +++ +G
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 145/267 (54%), Gaps = 1/267 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++++ +V P Y T+I L + + A L E+ K I ++VTY LI G+C
Sbjct: 352 EMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G ++A L +EM+ + T+ L+ LC++ +EA +F ++ +G+KP+ V
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++LMDG+C + +++A + M ++PD +Y ++ GLC +EA +L+ EM
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
I D I YN+LI G K G A+ + +EM G P ++TYN LL L K+ +
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGL 275
A L++E++ +GI P+ ++ +I+ +
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 45 EMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEG 104
E VA ++ P+ V+ T L +V A +N + L R+D + I V + K
Sbjct: 63 EHVADKLTPSLVSTTLL----SLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAV--ISKLS 116
Query: 105 NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV--NKAKDIFNLMVKRGVSPDVQS 162
+ K ++K+ V S +L D L + K+ +F+L+V+
Sbjct: 117 SPKPVTQ----LLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVR--------- 163
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
C+++MVDEA + M + T N ++ L +L RI +AW +M+
Sbjct: 164 ------CCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+V T+N +++VLCK + KA + ++ GIKP + TY L+ G GR++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A+ I ++ KG+ +Q Y +++ C EG E L +M+ G +PD+V+Y I+I
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILI 334
Query: 343 RALFEKGENDKGEKLLREMVARGLL 367
R G+ + EMV +G++
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMV 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 1 MGETSAALELLRRQ---LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G A LL+ + PD V Y ++ LC + +A +L EM + I P+ ++
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +LI G+ G + A + +EM+ + + T+N L+ L K + A+ + M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 118 KQGVKPNTVSYSSLMDG 134
+G+ PN S+ S+++
Sbjct: 600 SEGIVPNDSSFCSVIEA 616
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 1/334 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D + ID + L + L M + RI P+ T+ + + G+ +AV L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
M ++ +FN ++D LCK V++A +F + + +TV+Y+ +++G+CL+
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLI 208
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
K KA ++ MV+RG++P++ +Y ++ G + + AW+ EM D + Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
+++ G G I A + +EM G P V TYN ++ VLCK NV+ A+ + +E+
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
+G +P+V TY +LI GL G +E+ Q + +G Q Y +MI Y + ++
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
AL L KM S +P+ TY I+I +F + ++
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 144/265 (54%), Gaps = 1/265 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ + TI+D LCK K V AY+L+ + R + VTY ++ G+C++ + +A+ +L
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
EM+ + ++ + T+N ++ + G ++ A F M K+ + + V+Y++++ G+ +
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
E+ +A+++F+ M++ GV P V +Y +I LCK V+ A + +EM + Y
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N LI GL G S +L+ M + G P+ TYN ++ + V+KA+ L +++
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKD 283
P++ TY ILI G+ R +D
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSED 423
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 3/214 (1%)
Query: 3 ETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
T ALE+L+ + + P++ Y T++ + + A++ + EM + + VTYT
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++++GF + G++++A + +EMI + + V T+N ++ LCK+ NV+ A +F M+++
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G +PN +Y+ L+ G E ++ +++ M G P+ Q+Y ++I + V++A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
L ++M S + + YN LI G+ R D
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+ + LD H E + D ++ ID +L W L++ M P T+ +
Sbjct: 75 QFFHFLDNHHRE-YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVA 133
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
+ + DKA+ L + + G D+ ++ ++D LCK R++ A E+F+ + + ++
Sbjct: 134 ERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FS 192
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
V Y V++NG+C +AL ++ +M G P+ TY +++ F G+ +
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 358 LREMVAR 364
EM R
Sbjct: 253 FLEMKKR 259
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 191/360 (53%), Gaps = 15/360 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD+V +T ID LCK + +A + ++ I ++V+ +S+I GFC VG+ ++A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L++ R+ + ++ + +C G++ A +F + + G+ P+ V Y++++DGY
Sbjct: 362 KLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +KA F ++K G P + + TI+I + + +A + M +E + D
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YN+L+ G K +++ ++L++EM G PDV TYN L+ + +D+A +I E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF------QDILIKGYNVTVQAYTVMING 309
+ +G P +T +I G K G D QE F D+ +K VT A +++G
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKPDVVTCSA---LLHG 592
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
YCK ++A+ L +K+ +G PD V Y +I G+ +K +L+ MV RG+L N
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 163/295 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ A++L+ ++P++ +Y++ + ++C + A ++ E+ + P+ V YT+
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I G+C +G+ +A ++ + T IL+ A + G++ +A++VF M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+K + V+Y++LM GY ++NK ++ + M G+SPDV +Y I+I+ + +DEA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+++ E+ + T+ + +I G K G +A+ L M PDV+T + LL
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
CK+ ++KAI L ++ D G+KPDV Y LI G C VG ++ A E+ ++ +G
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 166/347 (47%), Gaps = 3/347 (0%)
Query: 21 VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNE 80
+++ +ID +++ V+ A L ++ I P+ SL+ V L+ A +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 81 MILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
M+ + + ++ + C +G + + M G++P+ V+++ +D C
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
+ +A + + G+S D S + +I+G CK+ +EA KL+ HS ++ + Y+S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI---HSFRLRPNIFVYSS 378
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ +C G + A + E+ G PD + Y ++D C DKA + G
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
P + T TILI + G + DA+ +F+++ +G + V Y +++GY K ++
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
LI +M S+G PD TY I+I ++ +G D+ +++ E++ RG +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 107/205 (52%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ + + ++ + +K DVV Y ++ K ++ ++L EM + I P+ TY
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+ + G + +A +++E+I + F ++ K G+ +EA ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+KP+ V+ S+L+ GYC + + KA +FN ++ G+ PDV Y +I+G C + +++A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 181 KLLDEMHSEKIIADTICYNSLIDGL 205
+L+ M ++ + +++L+ GL
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 191/360 (53%), Gaps = 15/360 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD+V +T ID LCK + +A + ++ I ++V+ +S+I GFC VG+ ++A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L++ R+ + ++ + +C G++ A +F + + G+ P+ V Y++++DGY
Sbjct: 362 KLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +KA F ++K G P + + TI+I + + +A + M +E + D
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ YN+L+ G K +++ ++L++EM G PDV TYN L+ + +D+A +I E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF------QDILIKGYNVTVQAYTVMING 309
+ +G P +T +I G K G D QE F D+ +K VT A +++G
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKPDVVTCSA---LLHG 592
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
YCK ++A+ L +K+ +G PD V Y +I G+ +K +L+ MV RG+L N
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 163/295 (55%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ A++L+ ++P++ +Y++ + ++C + A ++ E+ + P+ V YT+
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I G+C +G+ +A ++ + T IL+ A + G++ +A++VF M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+K + V+Y++LM GY ++NK ++ + M G+SPDV +Y I+I+ + +DEA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+++ E+ + T+ + +I G K G +A+ L M PDV+T + LL
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
CK+ ++KAI L ++ D G+KPDV Y LI G C VG ++ A E+ ++ +G
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 166/347 (47%), Gaps = 3/347 (0%)
Query: 21 VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNE 80
+++ +ID +++ V+ A L ++ I P+ SL+ V L+ A +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 81 MILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
M+ + + ++ + C +G + + M G++P+ V+++ +D C
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
+ +A + + G+S D S + +I+G CK+ +EA KL+ HS ++ + Y+S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI---HSFRLRPNIFVYSS 378
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ +C G + A + E+ G PD + Y ++D C DKA + G
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
P + T TILI + G + DA+ +F+++ +G + V Y +++GY K ++
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
LI +M S+G PD TY I+I ++ +G D+ +++ E++ RG +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 107/205 (52%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ + + ++ + +K DVV Y ++ K ++ ++L EM + I P+ TY
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI+ + G + +A +++E+I + F ++ K G+ +EA ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+KP+ V+ S+L+ GYC + + KA +FN ++ G+ PDV Y +I+G C + +++A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 181 KLLDEMHSEKIIADTICYNSLIDGL 205
+L+ M ++ + +++L+ GL
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL 663
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 178/332 (53%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PDV+ Y T+I + A + + + PP +TYT L+ C +A+ +
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV 266
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M ++ ++ T+N LV+ C+ GN++E +V ++ G++ NTV+Y++L+ C
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++ ++I N+M + P V +Y I+INGLCK +++ A +M +K + D +
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN+++ + K G + DA +L+ + + PP +ITYN ++D L K + KA+ L ++
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D GI PD T LI G C+ +++A ++ ++ +G + Y ++I G CK+ +
Sbjct: 447 DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIE 506
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKG 349
A+ ++ M + G PD Y I++ + E G
Sbjct: 507 MAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 169/348 (48%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + Y II +LCK + A L +M PP+ +TY ++I G +QA+
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ + + T+ +LV+ +C+ A V M +G P+ V+Y+SL++ C
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ + + ++ G+ + +Y +++ LC + DE ++L+ M+ I
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN LI+GLCK +S A +M + PD++TYN +L + K VD AI L+ ++
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ P + TY +IDGL K G +K A E++ +L G +I G+C+ L +
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
EA ++ + + G TY ++I+ L +K E + +++ M+ G
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A+ + QL P ++ YT +++ +C+ + A ++ +M + P+ VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SL+ C G L++ ++ ++ +++ T+N L+ +LC E + + +M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
P ++Y+ L++G C + +++A D F M+++ PD+ +Y ++ + K MVD+
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +LL + + I YNS+IDGL K G + A +L ++M G PD IT L+
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
C+++ V++A ++KE ++G TY ++I GLCK ++ A E+ + +L G
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 299 TVQAYTVMINGYCKEGLCDEAL 320
YT ++ G + G+ EA+
Sbjct: 523 DETIYTAIVKGVEEMGMGSEAV 544
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 170/342 (49%)
Query: 26 IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR 85
I+ +LC + ++DA L M P+ + ++L+ G + QL +A+ +L M++
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+ T+N+++ LCK+G+++ A + M G P+ ++Y++++ +A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+ ++ G P + +YT+++ +C+ A ++L++M E D + YNSL++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
C+ G + + ++ + G + +TYN LL LC D+ ++ + P V
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
TY ILI+GLCK L A + F +L + + Y ++ KEG+ D+A+ L+
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGL 409
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++++ P +TY +I L +KG K +L +M+ G+
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 171/358 (47%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+E++ R P + ++ L + + A + MV P+ +TY +I C
Sbjct: 127 VEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCK 186
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G ++ A+ LL +M L +V T+N ++ + GN ++A + ++ G P ++
Sbjct: 187 KGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMIT 246
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ L++ C +A ++ M G PD+ +Y ++N C+ ++E ++ +
Sbjct: 247 YTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL 306
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
S + +T+ YN+L+ LC + +++N M+ P VITYN L++ LCK+ +
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+AI ++ +Q PD+ TY ++ + K G + DA E+ + + Y +I
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI 426
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+G K+GL +AL L +M +G PD +T +I ++ ++L+E RG
Sbjct: 427 DGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T N ++ LC G + +A + VM + P+ S S+L+ G + +++KA I +M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
V G PD +Y +II LCK + A LL++M D I YN++I + G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
A + + G PP +ITY L++++C+ +AI +++++ +G PD+ TY L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
++ C+ G L++ + Q IL G + Y +++ C DE +++ M +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 332 MPDAVTYEIIIRAL 345
P +TY I+I L
Sbjct: 346 CPTVITYNILINGL 359
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 6/313 (1%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
T +++ C G+L A L+ M + + LV L + + +A + VM
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ G P+T++Y+ ++ C + A + M G PDV +Y +I +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
++A + + I Y L++ +C+ + A +++ +M G PD++TYN L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
++ C+ N+++ ++I+ I G++ + TY L+ LC + +EI + Y
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
TV Y ++ING CK L A+ +M +PD VTY ++ A+ ++G D +
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 357 LLREMVARGLLYN 369
LL GLL N
Sbjct: 406 LL------GLLKN 412
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%)
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
D ++ I++ LC + +A KL++ M + ++L+ GL ++ ++ A ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
M G PD ITYN ++ LCK ++ A+ L++++ G PDV TY +I +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
G + A ++D L G + YTV++ C+ A+ ++ M G PD VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ +G ++ +++ +++ GL N
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 226 TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQ 285
T D T N +L LC + + A L++ + P + + L+ GL ++ +L A
Sbjct: 100 TENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAM 159
Query: 286 EIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
I + +++ G Y ++I CK+G AL L+ M SG PD +TY +IR +
Sbjct: 160 CILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 346 FEKGENDKGEKLLREMVARG 365
F+ G ++ + ++ + G
Sbjct: 220 FDYGNAEQAIRFWKDQLQNG 239
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 194/385 (50%), Gaps = 43/385 (11%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D V Y D+L K V +A++L EM + I P+ + YT+LI G+C+ G++ A+ L+
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+EMI M ++ T+N+LV L + G+ +E ++ M +G KPN V+ S +++G C
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Query: 139 KEVNKAKDIFNLMVKR---------------GVS------------PDVQS-YTIIINGL 170
++V +A+D F+ + ++ G+S P +S Y + L
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
C +++A +L +M + ++ +I CKL + +A L + M RG PD+
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK------------- 277
TY ++ C+ + + KA +L ++++ +GIKPDV TYT+L+D K
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 278 -VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
VG+ K A E+ ++ G + V YTV+I+ CK ++A L +M SG PD V
Sbjct: 687 EVGKRK-ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 337 TYEIIIRALFEKGENDKGEKLLREM 361
Y +I + F KG D L+ E+
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 170/389 (43%), Gaps = 47/389 (12%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G A ELL+ + + PDV+ YTT+ID C V DA DL EM+ + P+ +T
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y L+ G G ++ + + M + T +++++ LC VKEA++ F+ +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL- 519
Query: 118 KQGVKPNTVS-----------------------------YSSLMDGYCLVKEVNKAKDIF 148
+Q N S Y L C+ + KA D+
Sbjct: 520 EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVL 579
Query: 149 NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
M V P +I CK+ V EA L D M +I D Y +I C+L
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK----SHNV---------DKAIALIKE 255
+ A L +M RG PDV+TY LLD K H KA +++E
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE 699
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
GI DV YT+LID CK+ L+ A E+F ++ G + AYT +I+ Y ++G
Sbjct: 700 FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGY 759
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRA 344
D A+ L++++ +P ++E +++
Sbjct: 760 IDMAVTLVTELSKKYNIPSE-SFEAAVKS 787
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 177/413 (42%), Gaps = 66/413 (15%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPN---AVTYTSLIYGFCIVGQLQQAVG 76
V Y T I+ LC A L E++ ++ ++ GFC +++ A
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAES 304
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
++ EM ++V+ ++D CK N+ EA M+ +G+K N V S ++ YC
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +A + F + D Y + + L K+ V+EA++LL EM I+ D I
Sbjct: 365 KMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI 424
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y +LIDG C G++ DA L++EM G PD+ITYN L+ L ++ + ++ + + + +
Sbjct: 425 NYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI----------LIKGY---NVTVQAY 303
+ +G KP+ T +++I+GLC ++K+A++ F + +KGY ++ +AY
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAY 544
Query: 304 TV--------------------------------------------------MINGYCKE 313
MI +CK
Sbjct: 545 KAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKL 604
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA L M G +PD TY I+I E K E L +M RG+
Sbjct: 605 NNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 181/392 (46%), Gaps = 47/392 (11%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DV +ID CK+ + +A +M+ K + N V + ++ +C + +A+
Sbjct: 317 DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
E + ++ +N+ DAL K G V+EA + M +G+ P+ ++Y++L+DGYCL
Sbjct: 377 KEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQ 436
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE--------- 189
+V A D+ + M+ G+SPD+ +Y ++++GL + +E ++ + M +E
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTN 496
Query: 190 KIIADTICY----------------------NSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
+I + +C+ S + G C+ G A+K + + P
Sbjct: 497 SVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEY---P 553
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
Y L LC ++KA ++K++ ++P +I CK+ +++AQ +
Sbjct: 554 LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL 613
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
F ++ +G + YT+MI+ YC+ +A +L M+ G PD VTY +++ +
Sbjct: 614 FDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Query: 348 -----------KGE--NDKGEKLLREMVARGL 366
+GE K ++LRE A G+
Sbjct: 674 LDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 9/278 (3%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
+T+ I+V ALC++GN++EA A+++ + + Y + ++G C+ E KA +
Sbjct: 217 YTYAIVVKALCRKGNLEEA----AMLLIEN--ESVFGYKTFINGLCVTGETEKAVALILE 270
Query: 151 MVKRG--VSPDVQS-YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
++ R D+++ +++ G C + A ++ EM D ++ID CK
Sbjct: 271 LIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCK 330
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
+ +A +++M +G + + + +L CK +A+ KE +D I D
Sbjct: 331 NMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC 390
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
Y + D L K+GR+++A E+ Q++ +G V YT +I+GYC +G +AL LI +M
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+G PD +TY +++ L G ++ ++ M A G
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 142/312 (45%), Gaps = 13/312 (4%)
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMD--VEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+L+ + +G +A +L + KR+D V++ N L++ + + G + +F +
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQS--KRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLK 208
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G+ N +Y+ ++ C + +A L+++ + V Y INGLC +
Sbjct: 209 QLGLCANEYTYAIVVKALCRKGNLEEAA---MLLIE---NESVFGYKTFINGLCVTGETE 262
Query: 178 EAWKLLDEMHSEKIIAD---TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
+A L+ E+ K +A ++ G C ++ A ++ EM G DV
Sbjct: 263 KAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACL 322
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
++D CK+ N+ +A+ + ++ +G+K + ++++ CK+ +A E F++
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 295 GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
+ Y V + K G +EA L+ +M+ G +PD + Y +I +G+
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 355 EKLLREMVARGL 366
L+ EM+ G+
Sbjct: 443 LDLIDEMIGNGM 454
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 17/291 (5%)
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
KR V + LV A G EA +V + + + + LM+ ++
Sbjct: 140 KRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGM 199
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
+F + + G+ + +Y I++ LC+ ++EA LL E S Y + I+
Sbjct: 200 LMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES------VFGYKTFIN 253
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL-------CKSHNVDKAIALIKEI 256
GLC G A L+ E+ R + + L VL C + A ++I E+
Sbjct: 254 GLCVTGETEKAVALILELIDR----KYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM 309
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
++ G DV+ +ID CK L +A +L KG V ++++ YCK +C
Sbjct: 310 EEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMC 369
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
EAL + D V Y + AL + G ++ +LL+EM RG++
Sbjct: 370 LEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIV 420
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCK--------------IKMVDEAWKLLD--- 184
N A + + GVSP+V +Y ++ L IK + + ++D
Sbjct: 71 NLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIE 130
Query: 185 ---EMHSEKIIADTI--CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
E EK + + +L+ LG +A ++ + D+ N L++
Sbjct: 131 VIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNR 190
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+ + + + L K+++ G+ + +TY I++ LC+ G L++A + + N +
Sbjct: 191 MTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NES 244
Query: 300 VQAYTVMINGYCKEGLCDEALALI 323
V Y ING C G ++A+ALI
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALI 268
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 189/393 (48%), Gaps = 37/393 (9%)
Query: 9 ELLRRQL-VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E R +L ++ Y + SLCK L A ++ M + + PN L+ F
Sbjct: 91 EFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAE 150
Query: 68 VGQLQQAVGLL-----------------NEMI--------LKRMDVEVH--------TFN 94
G+L A LL N ++ +K D + TFN
Sbjct: 151 KGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
IL+ LC G ++A + VM G +P+ V+Y++L+ G+C E+NKA ++F VK
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK-DVKS 269
Query: 155 G--VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
G SPDV +YT +I+G CK + EA LLD+M I + +N L+DG K G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A ++ +M G PDV+T+ L+D C+ V + L +E+ +G+ P+ FTY+ILI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+ LC RL A+E+ + K Y +I+G+CK G +EA ++ +ME
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
PD +T+ I+I KG + + +MVA G
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 185/341 (54%), Gaps = 1/341 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
LL+ V+ ++ +++++L K V DA L+ E + + + T+ LI G C VG
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV-KPNTVSY 128
+ ++A+ LL M + ++ T+N L+ CK + +A +F + V P+ V+Y
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+S++ GYC ++ +A + + M++ G+ P ++ ++++G K + A ++ +M S
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
D + + SLIDG C++G++S ++L EM+ RG P+ TY+ L++ LC + + K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L+ ++ + I P F Y +IDG CK G++ +A I +++ K +T++I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
G+C +G EA+++ KM + G PD +T ++ L + G
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 174/332 (52%), Gaps = 3/332 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E LR Q D + +I LC A +L M P+ VTY +LI GFC
Sbjct: 196 EHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 69 GQLQQAVGLLNEMILKRM-DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+L +A + ++ + +V T+ ++ CK G ++EA ++ M++ G+ P V+
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L+DGY E+ A++I M+ G PDV ++T +I+G C++ V + ++L +EM+
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + + Y+ LI+ LC R+ A +L+ ++ + P YNP++D CK+ V+
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A +++E++ + KPD T+TILI G C GR+ +A IF ++ G + + ++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+ K G+ EA L +++ G+ + V E
Sbjct: 495 SCLLKAGMAKEAYHL-NQIARKGQSNNVVPLE 525
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 143/279 (51%), Gaps = 3/279 (1%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T+N+L +LCK G A +F M GV PN L+ + +++ A + L+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LL 162
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
V ++N L K+ V++A KL DE + DT +N LI GLC +G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI-KPDVFTYTI 270
A +L+ M G PD++TYN L+ CKS+ ++KA + K+++ + PDV TYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+I G CK G++++A + D+L G T + V+++GY K G A + KM S G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD VT+ +I G+ +G +L EM ARG+ N
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E S+ L+ + R + P V + ++D K + A ++ +M++ P+ VT+TS
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G+C VGQ+ Q L EM + M T++IL++ALC E + +A+ + + +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P Y+ ++DG+C +VN+A I M K+ PD ++TI+I G C + EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+ +M + D I +SL+ L K G +A+ L N++ +G +V+
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 189/393 (48%), Gaps = 37/393 (9%)
Query: 9 ELLRRQL-VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E R +L ++ Y + SLCK L A ++ M + + PN L+ F
Sbjct: 91 EFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAE 150
Query: 68 VGQLQQAVGLL-----------------NEMI--------LKRMDVEVH--------TFN 94
G+L A LL N ++ +K D + TFN
Sbjct: 151 KGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
IL+ LC G ++A + VM G +P+ V+Y++L+ G+C E+NKA ++F VK
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK-DVKS 269
Query: 155 G--VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
G SPDV +YT +I+G CK + EA LLD+M I + +N L+DG K G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A ++ +M G PDV+T+ L+D C+ V + L +E+ +G+ P+ FTY+ILI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+ LC RL A+E+ + K Y +I+G+CK G +EA ++ +ME
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
PD +T+ I+I KG + + +MVA G
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 185/341 (54%), Gaps = 1/341 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
LL+ V+ ++ +++++L K V DA L+ E + + + T+ LI G C VG
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV-KPNTVSY 128
+ ++A+ LL M + ++ T+N L+ CK + +A +F + V P+ V+Y
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+S++ GYC ++ +A + + M++ G+ P ++ ++++G K + A ++ +M S
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
D + + SLIDG C++G++S ++L EM+ RG P+ TY+ L++ LC + + K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L+ ++ + I P F Y +IDG CK G++ +A I +++ K +T++I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
G+C +G EA+++ KM + G PD +T ++ L + G
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 174/332 (52%), Gaps = 3/332 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E LR Q D + +I LC A +L M P+ VTY +LI GFC
Sbjct: 196 EHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 69 GQLQQAVGLLNEMILKRM-DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+L +A + ++ + +V T+ ++ CK G ++EA ++ M++ G+ P V+
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L+DGY E+ A++I M+ G PDV ++T +I+G C++ V + ++L +EM+
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ + + Y+ LI+ LC R+ A +L+ ++ + P YNP++D CK+ V+
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A +++E++ + KPD T+TILI G C GR+ +A IF ++ G + + ++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+ K G+ EA L +++ G+ + V E
Sbjct: 495 SCLLKAGMAKEAYHL-NQIARKGQSNNVVPLE 525
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 143/279 (51%), Gaps = 3/279 (1%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T+N+L +LCK G A +F M GV PN L+ + +++ A + L+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LL 162
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
V ++N L K+ V++A KL DE + DT +N LI GLC +G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI-KPDVFTYTI 270
A +L+ M G PD++TYN L+ CKS+ ++KA + K+++ + PDV TYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+I G CK G++++A + D+L G T + V+++GY K G A + KM S G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD VT+ +I G+ +G +L EM ARG+ N
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E S+ L+ + R + P V + ++D K + A ++ +M++ P+ VT+TS
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G+C VGQ+ Q L EM + M T++IL++ALC E + +A+ + + +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P Y+ ++DG+C +VN+A I M K+ PD ++TI+I G C + EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+ +M + D I +SL+ L K G +A+ L N++ +G +V+
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 157/294 (53%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+V+ T ++DS K+ V A +++ EM K +P ++V Y +I G C G + A G +
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+M+ + ++ +V T+N L+ ALCKEG EA ++ M GV P+ +SY ++ G C+
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+VN+A + M+K + P+V + ++I+G + A +L+ M S + +
Sbjct: 384 GDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTN 443
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N+LI G K GR+ DAW + NEM PD TYN LL C ++ A L E+
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+G +PD+ TYT L+ GLC GRLK A+ + I G + + ++ Y +
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 183/407 (44%), Gaps = 42/407 (10%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AAL L ++ + V P ++ + +++ LCK + A L EM PN V+Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC----------------- 101
+LI G C V + +A+ L N M + T NI+V ALC
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 102 ----------------------KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
K GNV +A V+ M ++ V ++V Y+ ++ G C
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ A MVKRGV+PDV +Y +I+ LCK DEA L M + + D I Y
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+I GLC G ++ A + + M P+V+ +N ++D + + A++++ +
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G+KP+V+T LI G K GRL DA + ++ + Y +++ C G A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
L +M G PD +TY ++R L KG K E LL + A G+
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
++++I+ LC + A L +M+ + P +T+ L+ G C G +++A GL+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
++N L+ LC NV +A +F M K G++PN V+ + ++ C +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 142 -NKAKDIFN--LMVKRGVSP-DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
N K + L + +P D+ TI+++ K V +A ++ EM + + AD++
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN +I GLC G + A+ + +M RG PDV TYN L+ LCK D+A L +Q
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ G+ PD +Y ++I GLC G + A E +L V + V+I+GY + G
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
AL++++ M S G P+ T +I + G
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGR 455
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 39/372 (10%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC---- 66
+R P+ V Y T+I LC V A L++ M I PN VT +++ C
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 67 -----------------------IV------------GQLQQAVGLLNEMILKRMDVEVH 91
IV G + QA+ + EM K + +
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
+N+++ LC GN+ A M+K+GV P+ +Y++L+ C + ++A D+ M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
GV+PD SY +II GLC V+ A + L M ++ + + +N +IDG + G
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
S A ++N M G P+V T N L+ K + A + E++ I PD TY +L
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
+ C +G L+ A +++ ++L +G + YT ++ G C +G +A +L+S+++++G
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 332 MPDAVTYEIIIR 343
D V + I+ +
Sbjct: 542 TIDHVPFLILAK 553
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 163/316 (51%), Gaps = 4/316 (1%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
++S++ C+ G+L A+ L +MI + + T N L++ LCK G +++A + M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV- 176
+ G PN VSY++L+ G C V V+KA +FN M K G+ P+ + II++ LC+ ++
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 177 DEAWKLLDE-MHSEKIIA--DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+ KLL+E + S + A D + L+D K G + A ++ EM + P D + Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N ++ LC S N+ A + ++ +G+ PDVFTY LI LCK G+ +A ++ +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
G +Y V+I G C G + A + M S +P+ + + ++I G+
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 354 GEKLLREMVARGLLYN 369
+L M++ G+ N
Sbjct: 424 ALSVLNLMLSYGVKPN 439
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PDV Y T+I +LCK+ +A DL+ M + P+ ++Y +I G CI G + +A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L M+ + EV +N+++D + G+ A +V +M+ GVKPN + ++L+ GY
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 136 -----------------------------------CLVKEVNKAKDIFNLMVKRGVSPDV 160
C + + A +++ M++RG PD+
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
+YT ++ GLC + +A LL + + I D + + L +L R +A+
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+TS+AL +L L VKP+V +I K + DA+ + +EM + +I P+ TY
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
L+ C +G L+ A L +EM+ + ++ T+ LV LC +G +K+A+++ + +
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV---KRGVS 157
G+ + V + L Y ++ +A ++ + RGVS
Sbjct: 539 TGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVS 580
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 187/387 (48%), Gaps = 38/387 (9%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ + A E+L+R + PDVV YT +ID+LC + + A +++ +M R P+ VTY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+L+ F L +EM +V TF ILVDALCK GN EA + VM
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIIN---------- 168
QG+ PN +Y++L+ G V ++ A ++F M GV P +Y + I+
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 169 -------------------------GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
L K EA ++ + ++ D++ YN ++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
K+G I +A KL++EM G PDVI N L++ L K+ VD+A + +++ +KP
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
V TY L+ GL K G++++A E+F+ ++ KG + + + CK AL ++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGE 350
KM G +PD TY II L + G+
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 187/367 (50%), Gaps = 2/367 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
GE L+++R Q + P++ Y T+I L + + DA +L+ M + + P A TY
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
I + G A+ +M K + + N + +L K G +EAK +F + G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P++V+Y+ +M Y V E+++A + + M++ G PDV +IN L K VDEAW
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
K+ M K+ + YN+L+ GL K G+I +A +L M +G PP+ IT+N L D L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
CK+ V A+ ++ ++ D G PDVFTY +I GL K G++K+A F + Y V
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFV 678
Query: 301 QAYTVMINGYCKEGLCDEALALISK-MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
T ++ G K L ++A +I+ + + P + +E +I ++ + D
Sbjct: 679 TLCT-LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 360 EMVARGL 366
+VA G+
Sbjct: 738 RLVANGI 744
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 156/293 (53%), Gaps = 2/293 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PDV Y ++D+ K + + ++LY EM N +T+ +I G G + A+ L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 78 LNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+++ R T+ L+D L K G + EAK +F M+ G +PN Y+ L++G+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
E + A +F MVK GV PD+++Y+++++ LC + VDE E+ + D +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMH-HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
CYN +I+GL K R+ +A L NEM RG PD+ TYN L+ L + V++A + E
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
IQ G++P+VFT+ LI G G+ + A ++Q ++ G++ Y + N
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 177/359 (49%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
AL +R + Y +I L K + ++A ++Y M+ + P+ TY+SL+ G
Sbjct: 175 ALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG 234
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
+ +GLL EM + V+TF I + L + G + EA + M +G P+ V
Sbjct: 235 KRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 294
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+Y+ L+D C ++++ AK++F M PD +Y +++ + +D + EM
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ + D + + L+D LCK G +A+ ++ M +G P++ TYN L+ L + H +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
D A+ L ++ G+KP +TY + ID K G A E F+ + KG + A
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ K G EA + ++ G +PD+VTY ++++ + GE D+ KLL EM+ G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 13/365 (3%)
Query: 5 SAALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
+ A+E+ RR ++ +P + Y++++ L K + + L EM + PN T+T
Sbjct: 205 TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVE-----VHTFNILVDALCKEGNVKEAKNVFAVM 116
I G++ +A ILKRMD E V T+ +L+DALC + AK VF M
Sbjct: 265 IRVLGRAGKINEAY-----EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
KP+ V+Y +L+D + ++++ K ++ M K G PDV ++TI+++ LCK
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
EA+ LD M + I+ + YN+LI GL ++ R+ DA +L M G P TY
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+D KS + A+ ++++ +GI P++ + L K GR ++A++IF + G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
Y +M+ Y K G DEA+ L+S+M +G PD + +I L++ D+ K
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 357 LLREM 361
+ M
Sbjct: 560 MFMRM 564
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 2/326 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V+P + Y +I L + ++ A D++ ++ + P+ TY L+ + G++ +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK-QGVKPNTVSYSSLMDG 134
L EM + T NI++ L K GNV +A +++ +M + P +Y L+DG
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ +AK +F M+ G P+ Y I+ING K D A L M E + D
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
Y+ L+D LC +GR+ + E+ G PDV+ YN +++ L KSH +++A+ L
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 255 EIQ-DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
E++ +GI PD++TY LI L G +++A +I+ +I G V + +I GY
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 314 GLCDEALALISKMESSGRMPDAVTYE 339
G + A A+ M + G P+ TYE
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 191/394 (48%), Gaps = 40/394 (10%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAY--------------------DLYSEMVAKRIP 52
++LV PD V T++ + K L+ DAY DL ++A+
Sbjct: 670 KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI 729
Query: 53 PNAVTYTSLIY--GFCIVGQL--------------QQAVGLLNEMILKRMDVE--VHTFN 94
NAV+++ + G C G L E K + V+ + T+N
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
+L+ L + ++ A++VF + G P+ +Y+ L+D Y ++++ +++ M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC-YNSLIDGLCKLGRISD 213
+ ++ I+I+GL K VD+A L ++ S++ + T C Y LIDGL K GR+ +
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A +L M G P+ YN L++ K+ D A AL K + +G++PD+ TY++L+D
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS-GRM 332
LC VGR+ + F+++ G N V Y ++ING K +EAL L ++M++S G
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
PD TY +I L G ++ K+ E+ GL
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 159/330 (48%), Gaps = 3/330 (0%)
Query: 40 YDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDA 99
+DL + + KR + TY ++ + G L+QA L +M + +++N L+
Sbjct: 141 FDLMQKRIIKR---DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHL 197
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
L K EA V+ M+ +G +P+ +YSSLM G ++++ + M G+ P+
Sbjct: 198 LLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
V ++TI I L + ++EA+++L M E D + Y LID LC ++ A ++
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
+M PD +TY LLD + ++D E++ G PDV T+TIL+D LCK G
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+A + + +G + Y +I G + D+AL L MES G P A TY
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 340 IIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ I + G++ + +M +G+ N
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%)
Query: 90 VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
T N +++AL +G ++E VF +M K+ +K +T +Y ++ + + +A
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
M + G + SY +I+ L K + EA ++ M E Y+SL+ GL K
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
I L+ EM G P+V T+ + VL ++ +++A ++K + D+G PDV TYT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
+LID LC +L A+E+F+ + + Y +++ + D S+ME
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G +PD VT+ I++ AL + G + L M +G+L N
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+L+ + P Y +ID L K + +A L+ M+ PN Y LI GF
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ A L M+ + + ++ T+++LVD LC G V E + F + + G+ P+ V Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 129 SSLMDGYCLVKEVNKAKDIFNLM-VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ +++G + +A +FN M RG++PD+ +Y +I L MV+EA K+ +E+
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+ + +N+LI G G+ A+ + M G P+ TY L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE AA L +R + V+PD+ Y+ ++D LC V + + E+ + P+ V Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+I G +L++A+ L NEM R + +++T+N L+ L G V+EA ++ +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIIN 168
+ G++PN ++++L+ GY L + A ++ MV G SP+ +Y + N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSL 201
K+ D M+++ PD+ S + GL D ++ + ++ T N +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
++ L G++ + + + M R D TY + L + +A ++++++ G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
+ ++Y LI L K +A E+++ ++++G+ ++Q Y+ ++ G K D +
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
L+ +ME+ G P+ T+ I IR L G+ ++ ++L+ M G
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 168/344 (48%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P++V Y TII CK + +AY ++ E+ K P T+ ++I GFC G + L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L+E+ + + V V N ++DA + G + ++ KP+ +Y+ L++ C
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ A + K+G+ P+ SY +I CK K D A KLL +M D +
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y LI GL G + DA + ++ RG PD YN L+ LCK+ A L E+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D+ I PD + Y LIDG + G +A+++F + KG V V + MI G+C+ G+ D
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
EALA +++M +PD TY II ++ + K+ R M
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 172/359 (47%), Gaps = 11/359 (3%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KPDV Y +I+ LCK+ A E K + PN ++Y LI +C + A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL +M + ++ T+ IL+ L G++ +A N+ ++ +GV P+ Y+ LM G C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
AK +F+ M+ R + PD Y +I+G + DEA K+ + + D +
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+N++I G C+ G + +A +N M+ PD TY+ ++D K ++ AI + + +
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE-GL 315
+ KP+V TYT LI+G C G K A+E F+++ ++ V YT +I KE
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEK----------GENDKGEKLLREMVAR 364
++A+ M ++ +P+ VT+ +++ +K G N L E R
Sbjct: 642 LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 166/378 (43%), Gaps = 50/378 (13%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+ + Y +I + CK K A L +M + P+ VTY LI+G + G + AV +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
++I + + + +N+L+ LCK G AK +F+ M+ + + P+ Y++L+DG+
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++A+ +F+L V++GV DV + +I G C+ M+DEA ++ M+ E ++ D
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+++IDG K ++ A K+ M P+V+TY L++ C + A KE+Q
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 258 DQGIKPDVFTYTILIDGLCKV--------------------------------------- 278
+ + P+V TYT LI L K
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 279 -----------GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
G+ E F + G++ AY + C G+ A KM
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 328 SSGRMPDAVTYEIIIRAL 345
G PD V++ I+
Sbjct: 738 KKGFSPDPVSFAAILHGF 755
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 182/402 (45%), Gaps = 36/402 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIP-PNAVTYT 59
E L LR + VK + ++ + + +S A ++Y +V P+ +
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
SL+ +L A + +EM + V+ ++ ILV +C EG V+ + + +
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G PN V Y++++ GYC + ++ A +F + +G P ++++ +ING CK +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 180 WKLLDEM---------------------HSEK---------IIA-----DTICYNSLIDG 204
+LL E+ H K IIA D YN LI+
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
LCK G+ A ++E +G P+ ++Y PL+ CKS D A L+ ++ ++G KPD
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
+ TY ILI GL G + DA + ++ +G + Y ++++G CK G A L S
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFS 474
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+M +PDA Y +I G+ D+ K+ V +G+
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 158/337 (46%), Gaps = 17/337 (5%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R ++ PD +Y T+ID + +A ++S V K + + V + ++I GFC
Sbjct: 475 EMLDRNIL-PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L +A+ +N M + + + T++ ++D K+ ++ A +F M K KPN V+Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK-IKMVDEAWKLLDEMH 187
+SL++G+C + A++ F M R + P+V +YT +I L K +++A + M
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 188 SEKIIADTICYNSLIDGLCKL----------GRISDAWKLVNEMHHR----GTPPDVITY 233
+ K + + + +N L+ G K G L +E HR G Y
Sbjct: 654 TNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAY 713
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI-FQDIL 292
N L LC V A ++ +G PD ++ ++ G C VG K + + F ++
Sbjct: 714 NSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLG 773
Query: 293 IKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
KG V V+ V+ + +C+ + L + +E +
Sbjct: 774 EKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKA 810
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 154/312 (49%), Gaps = 8/312 (2%)
Query: 57 TYTSLIYGFCIVGQLQQAVG-LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF-- 113
++ L+ + I +++ +G L NE + + H + A + G++ +A ++
Sbjct: 104 SFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLH----AYAESGSLSKAVEIYDY 159
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
V + V P+ ++ +SL+ + + A+ +++ M RG S D S I++ G+C
Sbjct: 160 VVELYDSV-PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNE 218
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
V+ KL++ + I + + YN++I G CKLG I +A+ + E+ +G P + T+
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
+++ CK + + L+ E++++G++ V+ +ID + G D E I+
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
V Y ++IN CKEG + A+ + + G +P+ ++Y +I+A + E D
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 354 GEKLLREMVARG 365
KLL +M RG
Sbjct: 399 ASKLLLQMAERG 410
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS-PDVQSYTII 166
E ++V + + VK + S ++ Y ++KA +I++ +V+ S PDV + +
Sbjct: 117 EIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSL 176
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
++ L K + + +A K+ DEM D L+ G+C G++ KL+ +G
Sbjct: 177 LSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGC 236
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
P+++ YN ++ CK +++ A + KE++ +G P + T+ +I+G CK G +
Sbjct: 237 IPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDR 296
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+ ++ +G V+V +I+ + G + I + ++ PD TY I+I L
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC 356
Query: 347 EKGENDKGEKLLREMVARGLLYN 369
++G+ + L E +GL+ N
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPN 379
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 20/233 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E A + + + + PD Y+TIID K + ++ A ++ M + PN VTYTS
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKE-AKNVFAVMMKQ 119
LI GFC G + A EM L+ + V T+ L+ +L KE + E A + +MM
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKA----------------KDIFNLMVKRGVSPDVQSY 163
PN V+++ L+ G+ VK+ + + F+ M G S +Y
Sbjct: 656 KCVPNEVTFNCLLQGF--VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAY 713
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
+ LC MV A D+M + D + + +++ G C +G S W+
Sbjct: 714 NSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN-SKQWR 765
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 183/367 (49%), Gaps = 5/367 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M + SA E + + P V+ + T++DS K + ++ EM + I + VTY
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI GF G++++A +M V ++FN L++ CK+G +A V M+ G
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ P T +Y+ + C ++ A+++ + M +PDV SY +++G K+ EA
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
L D++ + I + YN+LIDGLC+ G + A +L EM + PDVITY L+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT- 299
K+ N+ A + E+ +GIKPD + YT G ++G A + ++++ ++
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ Y V I+G CK G +A+ K+ G +PD VTY +IR E G+ L
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 360 EMVARGL 366
EM+ + L
Sbjct: 575 EMLRKRL 581
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 184/350 (52%), Gaps = 9/350 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P Y I +LC + DA +L S M A P+ V+Y +L++G+ +G+ +A
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEAS 394
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L +++ + + T+N L+D LC+ GN++ A+ + M Q + P+ ++Y++L+ G+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM-HSEKIIAD 194
++ A ++++ M+++G+ PD +YT G ++ D+A++L +EM ++ D
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
YN IDGLCK+G + A + ++ G PD +TY ++ ++ A L
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
E+ + + P V TY +LI G K GRL+ A + ++ +G V + ++ G CK G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRAL--FEKGENDKGEKLLREMV 362
DEA + KME G P+ +Y ++I FEK E + KL +EM+
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE--EVVKLYKEML 682
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 189/395 (47%), Gaps = 41/395 (10%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE+ RR + +V Y +I+ K+ + +A + +M ++ LI G+C
Sbjct: 262 LEMKRRNIEFSEVT-YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G A G+ +EM+ + T+NI + ALC G + +A+ + + M P+ VS
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVS 376
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y++LM GY + + +A +F+ + + P + +Y +I+GLC+ ++ A +L +EM
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG---------------------- 225
++ I D I Y +L+ G K G +S A ++ +EM +G
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 226 --------------TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
PD+ YN +D LCK N+ KAI ++I G+ PD TYT +
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
I G + G+ K A+ ++ ++L K +V Y V+I G+ K G ++A ++M+ G
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
P+ +T+ ++ + + G D+ + L +M G+
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 184/368 (50%), Gaps = 7/368 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G A ELL + PDVV Y T++ K +A L+ ++ A I P+ VTY +
Sbjct: 356 FGRIDDARELLS-SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G C G L+ A L EM + + +V T+ LV K GN+ A V+ M+++G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKIKMVDEA 179
+KP+ +Y++ G + + +KA + MV +PD+ Y + I+GLCK+ + +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+ ++ ++ D + Y ++I G + G+ A L +EM + P VITY L+
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
K+ +++A E++ +G++P+V T+ L+ G+CK G + +A + +G
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+YT++I+ C +E + L +M PD T+ RALF+ E D + +
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH----RALFKHLEKDHESREV- 709
Query: 360 EMVARGLL 367
E + R LL
Sbjct: 710 EFLERLLL 717
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 173/337 (51%), Gaps = 5/337 (1%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG--QLQQAVGL 77
V ++ +I + + L +A +++ M + PN VTY ++I C G + +Q
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKF 326
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEA-KNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+EM + + TFN L+ A+C G + EA +N+F M + ++ + SY++L+D C
Sbjct: 327 FDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+++ A +I M + + P+V SY+ +I+G K DEA L EM I D +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN+L+ K+GR +A ++ EM G DV+TYN LL K D+ + E+
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ + + P++ TY+ LIDG K G K+A EIF++ G V Y+ +I+ CK GL
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
A++LI +M G P+ VTY II A D+
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 181/349 (51%), Gaps = 1/349 (0%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+ + +I +L + V+ A ++ A +++LI + G ++A+ + N M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 82 ILKRMDVEVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
+ + T+N ++DA K G K+ F M + GV+P+ ++++SL+
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
A+++F+ M R + DV SY +++ +CK +D A+++L +M ++I+ + + Y++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+IDG K GR +A L EM + G D ++YN LL + K ++A+ +++E+ G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
IK DV TY L+ G K G+ + +++F ++ + + Y+ +I+GY K GL EA+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ + +S+G D V Y +I AL + G L+ EM G+ N
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 162/306 (52%), Gaps = 3/306 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKL-VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
++P++V Y +ID+ K + + EM + P+ +T+ SL+ C G L +A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEA 357
Query: 75 V-GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
L +EM +R++ +V ++N L+DA+CK G + A + A M + + PN VSYS+++D
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
G+ ++A ++F M G++ D SY +++ K+ +EA +L EM S I
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D + YN+L+ G K G+ + K+ EM P+++TY+ L+D K +A+ +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
+E + G++ DV Y+ LID LCK G + A + ++ +G + V Y +I+ + +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 314 GLCDEA 319
D +
Sbjct: 598 ATMDRS 603
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 21/372 (5%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++R V+PD + + +++ + L A +L+ EM +RI + +Y +L+ C GQ
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+ A +L +M +KR+ V +++ ++D K G EA N+F M G+ + VSY++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ Y V +A DI M G+ DV +Y ++ G K DE K+ EM E
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
++ + + Y++LIDG K G +A ++ E G DV+ Y+ L+D LCK+ V A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKV------------GRLKDAQEIFQDILIKGYNV 298
+LI E+ +GI P+V TY +ID + G L + + N
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR 629
Query: 299 TVQAY---TVMINGY----CKEGLCDEA--LALISKMESSGRMPDAVTYEIIIRALFEKG 349
+Q + T N C+EG+ + + L + KM P+ VT+ I+ A
Sbjct: 630 VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCN 689
Query: 350 ENDKGEKLLREM 361
+ LL E+
Sbjct: 690 SFEDASMLLEEL 701
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 59/315 (18%)
Query: 2 GETSAALELLRRQLVK---PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A E+L + VK P+VV Y+T+ID K +A +L+ EM I + V+Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+L+ + VG+ ++A+ +L EM + +V T+N L+ K+G E K VF M +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 119 QGVKPNTVSYSSLMDGYC---LVKE--------------------------------VNK 143
+ V PN ++YS+L+DGY L KE V
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE---------------AWKLLDEMHS 188
A + + M K G+SP+V +Y II+ + +D A L E
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG 627
Query: 189 EKIIAD----TICYNSLIDGLCKLG--RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
++I T N+ C+ G +S ++ +MH P+V+T++ +L+ +
Sbjct: 628 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Query: 243 SHNVDKAIALIKEIQ 257
++ + A L++E++
Sbjct: 688 CNSFEDASMLLEELR 702
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 148/264 (56%)
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
D E N+ ++ + ++ G KPN + L+ C + KA + LMV G+
Sbjct: 79 DPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 138
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
PD +YT ++N LCK V A +L+++M ++T+ YN+L+ GLC LG ++ + +
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
V + +G P+ TY+ LL+ K D+A+ L+ EI +G +P++ +Y +L+ G CK
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
GR DA +F+++ KG+ V +Y +++ C +G +EA +L+++M+ R P VT
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 318
Query: 338 YEIIIRALFEKGENDKGEKLLREM 361
Y I+I +L G ++ ++L+EM
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEM 342
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 167/328 (50%), Gaps = 4/328 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KPD+ + D + +SD++ +V PN T L+Y C +L++A+
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
++ M+ + + + LV+ LCK GNV A + M G NTV+Y++L+ G C
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ +N++ ++++G++P+ +Y+ ++ K + DEA KLLDE+ + + +
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN L+ G CK GR DA L E+ +G +V++YN LL LC ++A +L+ E+
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG---YNVTVQAYTVMINGYCKE 313
P V TY ILI+ L GR + A ++ ++ + KG + VT +Y +I CKE
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIARLCKE 366
Query: 314 GLCDEALALISKMESSGRMPDAVTYEII 341
G D + + +M P+ TY I
Sbjct: 367 GKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 170/346 (49%), Gaps = 6/346 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+EL+ + PD YT +++ LCK V A L +M P N VTY +L+ G C+
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+G L Q++ + ++ K + T++ L++A KE EA + ++ +G +PN VS
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ L+ G+C + A +F + +G +V SY I++ LC +EA LL EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT---YNPLLDVLCKSH 244
+ YN LI+ L GR A +++ EM +G +T YNP++ LCK
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEG 367
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV-GRLKDAQEIFQDILIKGYNVTVQAY 303
VD + + E+ + KP+ TY I LC+ ++++A I Q + K T Y
Sbjct: 368 KVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFY 426
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
+I C++G A L+ +M G PDA TY +IR L +G
Sbjct: 427 KSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%)
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
L+ LCK R+ A +++ M G PD Y L++ LCK NV A+ L+++++D G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
+ TY L+ GLC +G L + + + ++ KG Y+ ++ KE DEA+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L+ ++ G P+ V+Y +++ ++G D L RE+ A+G N
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%)
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+SD++ + + G P+V LL LCK++ + KAI +I+ + GI PD YT
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
L++ LCK G + A ++ + + GY Y ++ G C G +++L + ++ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
P+A TY ++ A +++ D+ KLL E++ +G
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 2 GETSAALELLRR-----QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV 56
G T AL++L+ + Y +I LCK+ V EM+ +R PN
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 389
Query: 57 TYT-----------------------------------SLIYGFCIVGQLQQAVGLLNEM 81
TY S+I C G A LL EM
Sbjct: 390 TYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK-QGVKPNTVSYSSLMDGYCLVKE 140
D + HT++ L+ LC EG A V ++M + + KP ++++++ G C ++
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRR 509
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
+ A ++F +MV++ P+ +Y I++ G+ ++ A ++LDE+ K+I
Sbjct: 510 TDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIG 562
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
N+ + + ++ + G KP+V T L+ LCK RLK A + + ++ G AYT
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++N CK G A+ L+ KME G + VTY ++R L G ++ + + ++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 365 GLLYN 369
GL N
Sbjct: 206 GLAPN 210
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 37/316 (11%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD ++ ++D+LCK+ V +A ++ +M K PPN +TSL+YG+
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGW---------- 246
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
C+EG + EAK V M + G++P+ V +++L+ GY
Sbjct: 247 -------------------------CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-KMVDEAWKLLDEMHSEKIIAD 194
++ A D+ N M KRG P+V YT++I LC+ K +DEA ++ EM AD
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ Y +LI G CK G I + ++++M +G P +TY ++ K ++ + LI+
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+++ +G PD+ Y ++I CK+G +K+A ++ ++ G + V + +MING+ +G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 315 LCDEALALISKMESSG 330
EA +M S G
Sbjct: 462 FLIEACNHFKEMVSRG 477
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 166/311 (53%), Gaps = 2/311 (0%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ L+ F +++AV +L+EM ++ + + F L+DALCK G+VKEA VF M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
++ PN ++SL+ G+C ++ +AK++ M + G+ PD+ +T +++G +
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKL-GRISDAWKLVNEMHHRGTPPDVITYNPL 236
+A+ L+++M + CY LI LC+ R+ +A ++ EM G D++TY L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+ CK +DK +++ +++ +G+ P TY ++ K + ++ E+ + + +G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ + Y V+I CK G EA+ L ++ME++G P T+ I+I +G +
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 357 LLREMVARGLL 367
+EMV+RG+
Sbjct: 469 HFKEMVSRGIF 479
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 177/348 (50%), Gaps = 6/348 (1%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E S E +R + P++ +T+++ C++ + +A ++ +M + P+ V +T+L+
Sbjct: 220 EASKVFEDMREKF-PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCK-EGNVKEAKNVFAVMMKQGV 121
G+ G++ A L+N+M + + V+ + +L+ ALC+ E + EA VF M + G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+ + V+Y++L+ G+C ++K + + M K+GV P +Y I+ K + +E +
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
L+++M D + YN +I CKLG + +A +L NEM G P V T+ +++
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 242 KSHNVDKAIALIKEIQDQGI--KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN-- 297
+ +A KE+ +GI P T L++ L + +L+ A++++ I K +
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+ V A+T+ I+ +G EA + M MP TY +++ L
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 6/261 (2%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E + R + D+V YT +I CK ++ Y + +M K + P+ VTY
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
++ Q ++ + L+ +M + ++ +N+++ CK G VKEA ++ M G
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV--SPDVQSYTIIINGLC---KIKM 175
+ P ++ +++G+ + +A + F MV RG+ +P + ++N L K++M
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEM 502
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+ W + S + + + I L G + +A +M P TY
Sbjct: 503 AKDVWSCISNKTSSCEL-NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 236 LLDVLCKSHNVDKAIALIKEI 256
L+ L K +N A + +++
Sbjct: 562 LMKGLNKLYNRTIAAEITEKV 582
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 181/346 (52%), Gaps = 3/346 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y I L ++ A +Y +M TY+ I G C V + LL++M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
++ FN+ +D LC+E V A F M+++G +P+ VSY+ L++G +V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL-DEMHSEKIIADTICYNSL 201
A +I+N M++ GVSPD ++ ++ GLC + VD A++++ +E+ S ++ T+ YN+L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
I G CK GRI A L + M G PD++TYN LL+ ++ + +A ++ E+ GI
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 262 KPDVFTYTILIDGLCKVGRL-KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
+ D ++Y L+ C+V K + +++ +G+ V +Y+ +I +C+ +A
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAY 345
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
L +M G + + VTY +I+A +G + +KLL +M GL
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDVV YT +I+ L + V+DA ++++ M+ + P+ +L+ G C ++ A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 77 LLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
++ E I R+ + +N L+ CK G +++A+ + + M K G +P+ V+Y+ L++ Y
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ +A+ + MV+ G+ D SY ++ C++ D+ + + + + D
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDV 325
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ Y++LI+ C+ A++L EM +G +V+TY L+ + N A L+ +
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + G+ PD YT ++D LCK G + A +F D++ +Y +I+G C+ G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA+ L M+ PD +T++ II L + K+ +M+ +G
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 164/298 (55%), Gaps = 12/298 (4%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMV-AKRIPPNAVT 57
G+ + A+E+ R V PD ++ LC + V AY++ +E + + R+ + V
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
Y +LI GFC G++++A L + M + ++ T+N+L++ +K A+ V A M+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK----RGVSPDVQSYTIIINGLCKI 173
+ G++ + SY+ L+ +C V +K +N MVK RG DV SY+ +I C+
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFMVKEMEPRGFC-DVVSYSTLIETFCRA 338
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+A++L +EM + ++ + + Y SLI + G S A KL+++M G PD I Y
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
+LD LCKS NVDKA + ++ + I PD +Y LI GLC+ GR+ +A ++F+D+
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 151/303 (49%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++ VK V+Y +I CK + A L S M P+ VTY L+ +
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
L++A G++ EM+ + ++ +++N L+ C+ + + N M+ + VSY
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSY 328
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
S+L++ +C KA +F M ++G+ +V +YT +I + A KLLD+M
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ D I Y +++D LCK G + A+ + N+M PD I+YN L+ LC+S V +
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
AI L ++++ + PD T+ +I GL + +L A +++ ++ KG+ + +I
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Query: 309 GYC 311
C
Sbjct: 509 ASC 511
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 137/263 (52%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD+V Y +++ + ++ A + +EMV I +A +Y L+ C V +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ + + R +V +++ L++ C+ N ++A +F M ++G+ N V+Y+SL+ +
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ AK + + M + G+SPD YT I++ LCK VD+A+ + ++M +I D I
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YNSLI GLC+ GR+++A KL +M + PD +T+ ++ L + + A + ++
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 257 QDQGIKPDVFTYTILIDGLCKVG 279
D+G D LI C +
Sbjct: 492 MDKGFTLDRDVSDTLIKASCSMS 514
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
L K G + A VF M + + Y+ + A+ I+ M G S
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
+Y+ I+GLCK+K D LL +M + I D +N +D LC+ ++ A +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
M RG PDV++Y L++ L ++ V A+ + + G+ PD L+ GLC
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 280 RLKDAQE-IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
++ A E + ++I ++ Y +I+G+CK G ++A AL S M G PD VTY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGL 366
+++ ++ + E ++ EMV G+
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
MH + + A + Y S I L K G I +A ++ +EM H YN + VL +
Sbjct: 1 MH-QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESR 59
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ A A+ +++ G FTY+ I GLCKV + + D+ G+ + A+ V
Sbjct: 60 FELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNV 119
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
++ C+E A+ M GR PD V+Y I+I LF G+ ++ M+ G
Sbjct: 120 YLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Query: 366 L 366
+
Sbjct: 180 V 180
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%)
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+Y I L K M+D A ++ DEM + YN I L + R A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G TY+ + LCK D AL+ +++ G PD++ + + +D LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
A + F ++ +G V +YT++ING + G +A+ + + M SG PD
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 191/366 (52%), Gaps = 7/366 (1%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E A +R ++PDV Y ++I K+ +++ L+ EM+ + P+ +Y +L+
Sbjct: 66 EAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Query: 63 YGFCIVGQLQQAVGLLNEMI-LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ +G+ +A +L+E I L + + T+NIL+DALCK G+ A +F +K V
Sbjct: 126 SCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRV 184
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
KP ++Y+ L++G C + V + + K G +P+ +YT ++ K K +++ +
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQ 244
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT-PPDVITYNPLLDVL 240
L +M E D +++ L K GR +A++ ++E+ GT D+++YN LL++
Sbjct: 245 LFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLY 304
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K N+D L++EI+ +G+KPD +T+TI+++GL +G A++ I G +V
Sbjct: 305 FKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSV 364
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+I+G CK G D A+ L + ME + D TY ++ L + G KLL
Sbjct: 365 VTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLS 420
Query: 361 MVARGL 366
+G+
Sbjct: 421 CYNKGM 426
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 155/285 (54%), Gaps = 2/285 (0%)
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
++K + NI V++LCK N++ A+ + ++ GV P+ ++Y++L+ GY +
Sbjct: 5 LMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGI 64
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
++A + M + G+ PDV +Y +I+G K M++ +L DEM + D YN+L
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 202 IDGLCKLGRISDAWKLVNE-MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ KLGR +A+K+++E +H G P + TYN LLD LCKS + D AI L K ++ +
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
+KP++ TY ILI+GLCK R+ + +++ GY YT M+ Y K ++ L
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
L KM+ G D ++ AL + G ++ + + E+V G
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 164/334 (49%), Gaps = 3/334 (0%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
++SLCK + + A L + + + P+ +TY +LI G+ + +A + M +
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
+ +V T+N L+ K + +F M+ G+ P+ SY++LM Y + +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 147 IFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
I + + G+ P + +Y I+++ LCK D A +L + S ++ + + YN LI+GL
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGL 198
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
CK R+ ++ E+ G P+ +TY +L + K+ ++K + L +++ +G D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT-VQAYTVMINGYCKEGLCDEALALIS 324
F ++ L K GR ++A E +++ G + +Y ++N Y K+G D L+
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
++E G PD T+ II+ L G EK L
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 156/304 (51%), Gaps = 3/304 (0%)
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
C L++A LL + I + +V T+N L+ + + EA V M + G++P+
Sbjct: 23 LCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPD 82
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+Y+SL+ G +N+ +F+ M+ G+SPD+ SY +++ K+ EA+K+L
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH 142
Query: 185 E-MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
E +H ++ YN L+D LCK G +A +L + R P+++TYN L++ LCKS
Sbjct: 143 EDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKS 201
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
V +++E++ G P+ TYT ++ K R++ ++F + +GY A
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 304 TVMINGYCKEGLCDEALALISKMESSG-RMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+++ K G +EA + ++ SG R D V+Y ++ F+ G D + LL E+
Sbjct: 262 CAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 363 ARGL 366
+GL
Sbjct: 322 MKGL 325
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + + +A+ + ++ GV PDV +Y +I G + +DEA+ + M I D
Sbjct: 24 CKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDV 83
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YNSLI G K ++ +L +EM H G PD+ +YN L+ K +A ++ E
Sbjct: 84 TTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE 143
Query: 256 -IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
I G+ P + TY IL+D LCK G +A E+F+ + + + Y ++ING CK
Sbjct: 144 DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSR 202
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ +++ SG P+AVTY +++ F+ +KG +L +M G ++
Sbjct: 203 RVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 39/396 (9%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+ +R KPD Y +I +CK +V +A L +M + PN TYT LI GF I
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 68 VGQLQQAVGLLNEMILKRMDVE-------VH----------TFNILVDALCKEGNV---- 106
G++ +A+ L M +++++ VH F +LV + K+ N+
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG 322
Query: 107 --------------KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK--EVNKAKDIFNL 150
KE + ++G P++ ++++ M CL+K ++ + IF+
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDG 380
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
V RGV P Y +++ L + E + L +M + +++ YN++ID LCK R
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
I +A + EM RG P+++T+N L +V K +++++ G KPDV T+++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+I+ LC+ +KDA + F+++L G Y ++I C G D ++ L +KM+ +G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
PD Y I++ + + K E+LL+ M+ GL
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
ET L + + PD + + L K + + ++ V++ + P Y L+
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ + L +M + + V+++N ++D LCK ++ A M +G+
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN V++++ + GY + +V K + ++ G PDV ++++IIN LC+ K + +A+
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
EM I + I YN LI C G + KL +M G PD+ YN + CK
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
V KA L+K + G+KPD FTY+ LI L + GR +A+E+F I G
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 121/213 (56%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V Y +ID LCK + + +A +EM + I PN VT+ + + G+ + G +++ G+L
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
++++ +V TF+++++ LC+ +K+A + F M++ G++PN ++Y+ L+ C
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG 544
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ +++ +F M + G+SPD+ +Y I CK++ V +A +LL M + D Y+
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
+LI L + GR S+A ++ + + G PD T
Sbjct: 605 TLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 35/384 (9%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF----------- 65
+P+V YT +ID V +A M +++ PN T + ++G
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 66 CIVGQLQ-----QAVG-------LLNEMILKRMD------------VEVHTFNILVDALC 101
+VG ++ Q VG L N + K + TFN + L
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
K ++ E +F + +GVKP Y L+ + ++ M G+ V
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
SY +I+ LCK + ++ A L EM I + + +N+ + G G + ++ ++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G PDVIT++ +++ LC++ + A KE+ + GI+P+ TY ILI C G
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ ++F + G + + AY I +CK +A L+ M G PD TY +
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 342 IRALFEKGENDKGEKLLREMVARG 365
I+AL E G + ++ + G
Sbjct: 607 IKALSESGRESEAREMFSSIERHG 630
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP Y ++ +L + S+ +M + + +Y ++I C +++ A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L EM + + + TFN + G+VK+ V ++ G KP+ +++S +++
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C KE+ A D F M++ G+ P+ +Y I+I C D + KL +M + D
Sbjct: 506 CRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YN+ I CK+ ++ A +L+ M G PD TY+ L+ L +S +A +
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSS 625
Query: 256 IQDQGIKPDVFT 267
I+ G PD +T
Sbjct: 626 IERHGCVPDSYT 637
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
LE L KPDV+ ++ II+ LC+ K + DA+D + EM+ I PN +TY LI
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
C G ++V L +M + +++ +N + + CK VK+A+ + M++ G+KP+
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
+YS+L+ ++A+++F+ + + G PD SYT
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSIERHGCVPD--SYT 637
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%)
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
D+F + G+ P + Y +I+ L K +D A+ +M S+ D YN LI G+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
CK G + +A +LV +M G P+V TY L+D + VD+A+ ++ ++ + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
T + G+ + A E+ + K N+ Y ++ + E + K
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ G +PD+ T+ + L + + + ++ V+RG+
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV 386
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 175/325 (53%), Gaps = 3/325 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+VV Y T++ L K K+V A ++S MV PN TY+ L+ GQL + G++
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
E+ + M ++++ LV L K G+V EA +F M VK SY S+++ C
Sbjct: 364 -EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ +A ++ + + ++GV D Y + + L K+K + L ++M + D Y
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N LI ++G + +A + E+ PD+I+YN L++ L K+ +VD+A KE+Q+
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
+G+ PDV TY+ L++ K R++ A +F+++L+KG + Y ++++ K G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 319 ALALISKMESSGRMPDAVTYEIIIR 343
A+ L SKM+ G PD++TY ++ R
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLER 625
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 64/376 (17%)
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKE---------- 103
N+ TY L+ + +A + E+ +++ +N+L+DAL K+
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDM 261
Query: 104 ----------------------GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
G EA +F M+ +G+ N V Y++LM K V
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIIN--------------------------------G 169
+KA +F+ MV+ G P+ +Y++++N
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRT 381
Query: 170 LCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD 229
L K+ V EA +L +M S + + Y S+++ LC G+ +A ++++++H +G D
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
+ YN + L K + L ++++ G PD+FTY ILI +VG + +A IF+
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 290 DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
++ + +Y +IN K G DEA +M+ G PD VTY ++ +
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 350 ENDKGEKLLREMVARG 365
+ L EM+ +G
Sbjct: 562 RVEMAYSLFEEMLVKG 577
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T A+E+L + + V D +MY T+ +L K K +S +DL+ +M P+ TY
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI F VG++ +A+ + E+ ++ ++N L++ L K G+V EA F M +
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ P+ V+YS+LM+ + + V A +F M+ +G P++ +Y I+++ L K E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 179 AWKLLDEMHSEKIIADTICYNSL 201
A L +M + + D+I Y L
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVL 623
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 124/231 (53%), Gaps = 4/231 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VK + Y ++++SLC +A ++ S++ K + + + Y ++ + Q+
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L +M ++ T+NIL+ + + G V EA N+F + + KP+ +SY+SL++
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN-- 520
Query: 136 CLVK--EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
CL K +V++A F M ++G++PDV +Y+ ++ K + V+ A+ L +EM +
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
+ + YN L+D L K GR ++A L ++M +G PD ITY L + SH
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSH 631
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 140/308 (45%), Gaps = 38/308 (12%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
+ + +L+ M+ + + T NIL+ GN ++ + ++ K +K N+ +Y
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYK 207
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
L+ Y ++ +KA D++ + + G D+ +Y ++++ L K ++A ++ ++M
Sbjct: 208 CLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKR 264
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D Y +I + ++G+ +A L NEM G +V+ YN L+ VL K VDKA
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 250 IALIKEIQDQGIKPDVFTYTIL------------IDG--------------------LCK 277
I + + + G +P+ +TY++L +DG L K
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
+G + +A +F D+ +Y M+ C G EA+ ++SK+ G + D +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 338 YEIIIRAL 345
Y + AL
Sbjct: 445 YNTVFSAL 452
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 173/368 (47%), Gaps = 3/368 (0%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ S AL+LL + + +II +L +A L+ E+ I P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+L+ G+ G L+ A +++EM + + + HT+++L+DA G + A+ V M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
V+PN+ +S L+ G+ E K + M GV PD Q Y ++I+ K +D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A D M SE I D + +N+LID CK GR A ++ M RG P TYN +++
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
D L+ +++ QGI P+V T+T L+D K GR DA E +++ G
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y +IN Y + GL ++A+ M S G P + +I A E + + +L
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 359 REMVARGL 366
+ M G+
Sbjct: 643 QYMKENGV 650
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 174/358 (48%), Gaps = 2/358 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDA--YDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+R+ + D V Y+ +I SL + + LY E+ ++ + +I GF
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G +A+ LL + + T ++ AL G EA+ +F + + G+KP T +Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ GY + A+ + + M KRGVSPD +Y+++I+ + A +L EM +
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ ++ ++ L+ G G ++++ EM G PD YN ++D K + +D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ + +GI+PD T+ LID CK GR A+E+F+ + +G Y +MIN
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
Y + D+ L+ KM+S G +P+ VT+ ++ + G + + L EM + GL
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 35/355 (9%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ ++ V PD Y+ +ID+ A + EM A + PN+ ++ L+ GF G+
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
Q+ +L EM + + +N+++D K + A F M+ +G++P+ V++++
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+D +C A+++F M +RG P +Y I+IN + D+ +LL +M S+
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I+ + + + +L+D K GR +DA + + EM G P YN L++ + ++A+
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ + G+KP + LI+ + R DA
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRR--DA-------------------------- 636
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
EA A++ M+ +G PD VTY +++AL + K + EM+ G
Sbjct: 637 -------EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 162/365 (44%), Gaps = 4/365 (1%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
A L ++Q + P + Y +I + ++ + A +L ++M + V Y+ +I
Sbjct: 186 AFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT 243
Query: 67 IVGQLQQA--VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
++ + L E+ +++++V N ++ K G+ +A + + G+
Sbjct: 244 RSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAK 303
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
T + S++ +A+ +F + + G+ P ++Y ++ G K + +A ++
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
EM + D Y+ LID GR A ++ EM P+ ++ LL
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
K ++KE++ G+KPD Y ++ID K L A F +L +G +
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+I+ +CK G A + ME G +P A TY I+I + ++ D ++LL +M ++
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ 543
Query: 365 GLLYN 369
G+L N
Sbjct: 544 GILPN 548
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E + R+ P Y +I+S + D L +M ++ I PN VT+T+L+ +
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G+ A+ L EM + +N L++A + G ++A N F VM G+KP+ ++
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+SL++ + + +A + M + GV PDV +YT ++ L ++ + + +EM
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ Q + P+VV +TT++D K +DA + EM + + P++ Y +LI + G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+QAV M + + N L++A ++ EA V M + GVKP+ V+Y++
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
LM V + K ++ M+ G PD ++ +++ + L +K
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 4/373 (1%)
Query: 1 MGETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G +A+ L ++ ++P +YTT++ K V A DL+ EM P T
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
YT LI G G++ +A G +M+ + +V N L++ L K G V+E NVF+ M
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 118 KQGVKPNTVSYSSLMDGYCLVK-EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
P VSY++++ K V++ F+ M VSP +Y+I+I+G CK V
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
++A LL+EM + Y SLI+ L K R A +L E+ Y +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+ K + +A+ L E+++QG PDV+ Y L+ G+ K G + +A + + + G
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ ++ +++NG+ + G+ A+ + ++ SG PD VTY ++ G ++ +
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 357 LLREMVARGLLYN 369
++REM +G Y+
Sbjct: 606 MMREMKDKGFEYD 618
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 182/349 (52%), Gaps = 4/349 (1%)
Query: 1 MGETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ AL+L ++R P V YT +I L K V +AY Y +M+ + P+ V
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCK-EGNVKEAKNVFAVM 116
+L+ VG++++ + +EM + R V ++N ++ AL + + +V E + F M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
V P+ +YS L+DGYC V KA + M ++G P +Y +IN L K K
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+ A +L E+ + Y +I K G++S+A L NEM ++G+ PDV YN L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+ + K+ +++A +L++++++ G + D+ ++ I+++G + G + A E+F+ I G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
Y ++ + G+ +EA ++ +M+ G DA+TY I+ A+
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 39/395 (9%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E++R V + + ++ +L + K+VS A ++ + ++ P + TY S+I
Sbjct: 151 EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE 210
Query: 69 GQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
GQ ++ + EM D + T++ L+ + K G A +F M ++P
Sbjct: 211 GQHEKVHEVYTEMC-NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
Y++L+ Y V +V KA D+F M + G SP V +YT +I GL K VDEA+ +M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH-HRGTP------------------ 227
+ + D + N+L++ L K+GR+ + + +EM R TP
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 228 -----------------PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
P TY+ L+D CK++ V+KA+ L++E+ ++G P Y
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
LI+ L K R + A E+F+++ NV+ + Y VMI + K G EA+ L ++M++ G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
PD Y ++ + + G ++ LLR+M G
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 141/267 (52%), Gaps = 1/267 (0%)
Query: 18 PDVVMYTTIIDSLCKDKL-VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
P VV Y T+I +L + K VS+ + +M A + P+ TY+ LI G+C ++++A+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL EM K + L++AL K + A +F + + ++ Y+ ++ +
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++++A D+FN M +G PDV +Y +++G+ K M++EA LL +M AD
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+N +++G + G A ++ + H G PD +TYN LL + ++A +++E+
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKD 283
+D+G + D TY+ ++D + V KD
Sbjct: 611 KDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM-HSEKIIADTICYNSLIDGLCKLGRI 211
+R D +Y +I L + ++ E ++ + E+ + + + L+ L + +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMV 178
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG-IKPDVFTYTI 270
S A + + R P TYN ++ +L + +K + E+ ++G PD TY+
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
LI K+GR A +F ++ T + YT ++ Y K G ++AL L +M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
P TY +I+ L + G D+ ++M+ GL
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 181/355 (50%), Gaps = 3/355 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPD +++ II++ + + A ++ +M P A T+ +LI G+ +G+L+++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 76 GLLNEMILKRM-DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
LL+ M+ M T NILV A C + ++EA N+ M GVKP+ V++++L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 135 YCLVKEVNKAKD-IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
Y + A+D I M+ V P+V++ I+NG C+ ++EA + M +
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ +NSLI G + + ++V+ M G PDV+T++ L++ ++ + +
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
++ + GI PD+ ++IL G + G + A++I + G V YT +I+G+C
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Query: 314 GLCDEALALISKMES-SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
G +A+ + KM G P+ TYE +I E + K E+LL++M + ++
Sbjct: 685 GEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 186/380 (48%), Gaps = 37/380 (9%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DV T +++ L + +A+ +++ ++ + P+ +TYT+L+ + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+++ + + FN +++A + GN+ +A +F M + G KP ++++L+ GY +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 139 KEVNKAKDIFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ ++ + ++M++ + P+ ++ I++ C + ++EAW ++ +M S + D +
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 198 YNSL------------------------------------IDGLCKLGRISDAWKLVNEM 221
+N+L ++G C+ G++ +A + M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G P++ +N L+ +++D ++ +++ G+KPDV T++ L++ VG +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
K +EI+ D+L G + + A++++ GY + G ++A ++++M G P+ V Y I
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 342 IRALFEKGENDKGEKLLREM 361
I GE K ++ ++M
Sbjct: 678 ISGWCSAGEMKKAMQVYKKM 697
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
+ T L+ G G+ Q+A + N +I + + T+ LV AL ++ + ++ + +
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
K G+KP+T+ ++++++ +++A IF M + G P ++ +I G KI +
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 177 DEAWKLLDEMHSEKIIA--DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
+E+ +LLD M ++++ D C N L+ C +I +AW +V +M G PDV+T+N
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTC-NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 235 PLLDVLCKSHNVDKAI-ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
L + + A +I + +KP+V T +++G C+ G++++A F +
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
G + + + +I G+ D ++ ME G PD VT+ ++ A G+ +
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 354 GEKLLREMVARGL 366
E++ +M+ G+
Sbjct: 620 CEEIYTDMLEGGI 632
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 177/356 (49%), Gaps = 5/356 (1%)
Query: 3 ETSAALEL-LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
E+S L++ LR ++++P+ ++ + C + + +A+++ +M + + P+ VT+ +L
Sbjct: 442 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 62 IYGFCIVGQLQQAVGLL-NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+ +G A ++ M+ ++ V T +V+ C+EG ++EA F M + G
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V PN ++SL+ G+ + +++ ++ +LM + GV PDV +++ ++N + +
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++ +M I D ++ L G + G A +++N+M G P+V+ Y ++
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 241 CKSHNVDKAIALIKEIQD-QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C + + KA+ + K++ G+ P++ TY LI G + + A+E+ +D+ K T
Sbjct: 682 CSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPT 741
Query: 300 VQAYTVMINGYCKEGL--CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
+ ++ +G+ G+ ++A L S +S ++ LF KG +K
Sbjct: 742 RKTMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNIASSRSPLFLKGMPEK 797
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
DV+S T ++NGL + EA + + + E I Y +L+ L + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
+++ G PD I +N +++ +S N+D+A+ + +++++ G KP T+ LI G K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYT--VMINGYCKEGLCDEALALISKMESSGRMPDAV 336
G+L+++ + D++++ + T +++ +C + +EA ++ KM+S G PD V
Sbjct: 438 GKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
T+ + +A G E +M+ +L+N
Sbjct: 497 TFNTLAKAYARIGSTCTAE----DMIIPRMLHN 525
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 173/345 (50%), Gaps = 2/345 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +IDSLC+ + A + M +K + P +Y ++I+G C G +A LL E
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+T+ +L+++LCKE + +A+NV +M+++ T Y+ + G C++
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA-DTICYNSL 201
+ ++ M++ PD + +INGLCK+ VD+A K+LD+M + K A D + N++
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 202 IDGLCKLGRISDAWKLVNE-MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ GL GR +A ++N M P V+ YN ++ L K H D+A+++ +++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
+ D TY I+IDGLC ++ A++ + D++ Y + G C+ G +A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ + SG +P+ V Y +I G + ++L EM G
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNG 654
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 168/389 (43%), Gaps = 42/389 (10%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD + +++I SLC +A+ + +A P+ T +I +G
Sbjct: 87 RPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLG 146
Query: 77 LLNEMI--LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+++ +I K + +N L++ LC V +A + M +G P+ V++++L+ G
Sbjct: 147 VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-------KMVDEAWK------ 181
YC ++E+ A +F+ M G+ P+ + +++I G K+ K++ E W+
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 182 -----------LLDEMHSEKIIAD--------TIC--------YNSLIDGLCKLGRISDA 214
L+D M E D ++C Y +ID LC+ R A
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
++V M +G P +YN ++ LCK +A L++E + P +TY +L++
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
LCK A+ + + +L K + Y + + G C E L ++ M PD
Sbjct: 387 LCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMVA 363
T +I L + G D K+L +M+
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMT 475
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 2/272 (0%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ LEL+ R+ +Y + LC ++ ++ M+ P+ T ++
Sbjct: 394 GKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTV 453
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDV-EVHTFNILVDALCKEGNVKEAKNVF-AVMMKQ 119
I G C +G++ A+ +L++M+ + + T N ++ L +G +EA +V VM +
Sbjct: 454 INGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPEN 513
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
+KP V+Y++++ G + + ++A +F + K V+ D +Y III+GLC VD A
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMA 573
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K D++ D Y + + GLC+ G +SDA + ++ G P+V+ YN ++
Sbjct: 574 KKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAE 633
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
+S +A +++E++ G PD T+ IL
Sbjct: 634 CSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 179/393 (45%), Gaps = 43/393 (10%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L+++ + VKP V + +I+ L + A Y + K +A S++
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMV 539
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN-VKEAKNVFAVMMKQGV 121
GFC G L A I + + L +LC E + + +A+++ M K GV
Sbjct: 540 KGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV 596
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+P Y L+ +C V V KA++ F ++V + + PD+ +YTI+IN C++ +A+
Sbjct: 597 EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYA 656
Query: 182 LLD----------------------------EMHSEKIIADTICYNSLIDGLCKLGRISD 213
L + EM + +I D + Y +I+ C L +
Sbjct: 657 LFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKK 716
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ L +M R PDV+TY LL + + L +E++ +KPDVF YT+LID
Sbjct: 717 VYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFYYTVLID 769
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
CK+G L +A+ IF ++ G + YT +I CK G EA + +M SG P
Sbjct: 770 WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKP 829
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
D V Y +I G K KL++EM+ +G+
Sbjct: 830 DVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 178/365 (48%), Gaps = 13/365 (3%)
Query: 9 ELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPN----AVTYTSL 61
+LL R L+ + V Y I+ LC +++ AY L + I + + Y +
Sbjct: 238 KLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKV 297
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ G C +++ A ++ +M +D +V+ ++ +++ K N+ +A +VF M+K+
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+ N V SS++ YC + ++A D+F + +S D Y + + L K+ V+EA +
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
L EM + I D I Y +LI G C G+ SDA+ L+ EM G PD++ YN L L
Sbjct: 418 LFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA 477
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ +A +K ++++G+KP T+ ++I+GL G L A+ ++ + K + +
Sbjct: 478 TNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK----SRE 533
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M+ G+C G D A ++E +P +V + + EK K + LL M
Sbjct: 534 NDASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 362 VARGL 366
G+
Sbjct: 592 WKLGV 596
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 16/326 (4%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDK-LVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
+R + P V Y T+ SLC +K +S A DL M + P Y LI +C
Sbjct: 554 RFIRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V +++A ++ K++ ++ T+ I+++ C+ K+A +F M ++ VKP+ V+
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
YS L++ + D+ M V PDV YTI+IN C + + + + L +M
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+I+ D + Y L+ L EM PDV Y L+D CK ++
Sbjct: 726 RREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A + ++ + G+ PD YT LI CK+G LK+A+ IF ++ G V YT +I
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 308 NGYCKEGLCDEALALISKMESSGRMP 333
G C+ G +A+ L+ +M G P
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 174/368 (47%), Gaps = 18/368 (4%)
Query: 1 MGETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
MG S A +L R + D V Y D+L K V +A +L+ EM K I P+ +
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
YT+LI G C+ G+ A L+ EM ++ +N+L L G +EA +M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+GVKP V+++ +++G E++KA+ + + + D ++ G C +D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLD 549
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLC-KLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
A++ + E + ++ Y +L LC + IS A L++ M G P+ Y L
Sbjct: 550 HAFERF--IRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+ C+ +NV KA + + + I PD+FTYTI+I+ C++ K A +F+D+ +
Sbjct: 607 IGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV 666
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
V Y+V++N D L + +ME+ +PD V Y I+I + K
Sbjct: 667 KPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 357 LLREMVAR 364
L ++M R
Sbjct: 720 LFKDMKRR 727
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 5 SAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
S A +LL R V+P+ MY +I + C+ V A + + +V K+I P+ TYT +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
I +C + + +QA L +M KR DV +V T+++L+++ E ++K F V+
Sbjct: 642 INTYCRLNEPKQAYALFEDM--KRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVI--- 695
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
P+ V Y+ +++ YC + ++ K +F M +R + PDV +YT+++
Sbjct: 696 ---PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPE 745
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
L EM + + D Y LID CK+G + +A ++ ++M G PD Y L+
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
CK + +A + + + G+KPDV YT LI G C+ G + A ++ +++L KG T
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A + ++R+ + PDVV YT ++ + +L EM A + P+ YT LI
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
C +G L +A + ++MI +D + + L+ CK G +KEAK +F M++ GVKP+
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTII 166
V Y++L+ G C V KA + M+++G+ P S + +
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+GE + + V PD YT +I CK + +A ++ M+ + P+ V YT+
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 61 LIYGFCIVGQLQQAVGLLNEMILK 84
LI G C G + +AV L+ EM+ K
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEK 860
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 147/277 (53%), Gaps = 1/277 (0%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
+N L+ +L + G V+E K ++ M++ V P+ ++++L++GYC + V +AK ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+ G PD +YT I G C+ K VD A+K+ EM + + Y LI GL + +I
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+A L+ +M P+V TY L+D LC S +A+ L K++ + GIKPD YT+LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
C L +A + + +L G V Y +I G+CK+ + +A+ L+SKM +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLV 361
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD +TY +I G D +LL M GL+ N
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
LV PD+ + T+++ CK V +A + ++ P+ TYTS I G C ++ A
Sbjct: 150 LVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ EM ++ L+ L + + EA ++ M PN +Y+ L+D
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
C + ++A ++F M + G+ PD YT++I C +DEA LL+ M ++ +
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
I YN+LI G CK + A L+++M + PD+ITYN L+ C S N+D A L+
Sbjct: 330 VITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 255 EIQDQGIKPD 264
+++ G+ P+
Sbjct: 389 LMEESGLVPN 398
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E S LE + + P+V+ Y +I CK K V A L S+M+ + + P+ +TY +
Sbjct: 311 LDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNT 369
Query: 61 LIYGFCIVGQLQQAVGLLNEM 81
LI G C G L A LL+ M
Sbjct: 370 LIAGQCSSGNLDSAYRLLSLM 390
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 176/350 (50%), Gaps = 35/350 (10%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + ++ +I +L + + S+A + + R P+ + YT+L+ G+C G++ +A +
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKV 277
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM L ++ V+T++I++DALC+ G + A +VFA M+ G PN +++++LM +
Sbjct: 278 FKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVK 337
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K ++N M K G PD +Y +I C+ + ++ A K+L+ M +K +
Sbjct: 338 AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAST 397
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N++ + K ++ A ++ ++M P+ +TYN L+ + S + D + + KE+
Sbjct: 398 FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMD 457
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D+ ++P+V TY +L+ C +G +A ++F++++
Sbjct: 458 DKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV------------------------- 492
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
E P YE+++ L G+ K E+L+ +M+ +GL+
Sbjct: 493 ---------EEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 159/345 (46%), Gaps = 1/345 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +ID K + A+ L M ++ + + T+T LI + G +AV N M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ F+I++ L ++ EA++ F + K +P+ + Y++L+ G+C E++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+A+ +F M G+ P+V +Y+I+I+ LC+ + A + +M + I +N+L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
K GR ++ N+M G PD ITYN L++ C+ N++ A+ ++ + + +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
+ T+ + + K + A ++ ++ Y +++ + D L +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+M+ P+ TY +++ G + KL +EMV L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL 497
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 131/272 (48%), Gaps = 1/272 (0%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
H +N ++D K A ++ +M + V+ + +++ L+ Y ++A FN
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
M G PD +++I+I+ L + + EA D + ++ D I Y +L+ G C+ G
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGE 270
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
IS+A K+ EM G P+V TY+ ++D LC+ + +A + ++ D G P+ T+
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
L+ K GR + +++ + G Y +I +C++ + A+ +++ M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+A T+ I R + +K + + ++ +M+
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 145/297 (48%), Gaps = 37/297 (12%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE S A ++ + ++P+V Y+ +ID+LC+ +S A+D++++M+ PNA+T+
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+L+ G+ ++ + + N+M + + T+N L++A C++ N++ A V M+K
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ + N +++++ ++VN A +++ M++ P+ +Y I++ K D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
K+ EM +++ + Y L+ C +G ++A+KL EM
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM----------------- 491
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++++ + P + Y +++ L + G+LK +E+ + ++ KG
Sbjct: 492 -----------------VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
SP + I ++G K++ D AW L+D M S + + LI + G S+A
Sbjct: 150 SPHPYNEMIDLSG--KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVH 207
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
N M G PD I ++ ++ L + +A + ++D+ +PDV YT L+ G C
Sbjct: 208 CFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWC 266
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
+ G + +A+++F+++ + G V Y+++I+ C+ G A + + M SG P+A+
Sbjct: 267 RAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARG 365
T+ ++R + G +K ++ +M G
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN +ID K+ + AW L++ M R + T+ L+ ++ +A+ ++
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D G PD ++I+I L + R +AQ F D L + V YT ++ G+C+ G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
EA + +M+ +G P+ TY I+I AL G+ + + +M+ G N
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 147/285 (51%), Gaps = 7/285 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L+ ++PD V + SLC+ V +A DL E+ K PP+ TY L+ C
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 68 VGQLQQAVGLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
L ++EM R D +V +F IL+D +C N++EA + + + G KP
Sbjct: 207 CKDLHVVYEFVDEM---RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ Y+++M G+C + + ++A ++ M + GV PD +Y +I GL K V+EA L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
M DT Y SL++G+C+ G A L+ EM RG P+ TYN LL LCK+
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
+DK + L + ++ G+K + Y L+ L K G++ +A E+F
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 175/341 (51%), Gaps = 6/341 (1%)
Query: 32 KDKLVSDAYDLYSEMVA-KRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV 90
K +SDA L++ + A RIP + + S++ + + + V L ++ + +
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 91 --HTFNILVDALCK--EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
TF IL+ C+ + ++ V +M+ G++P+ V+ + C V++AKD
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSLIDGL 205
+ + ++ PD +Y ++ LCK K + ++ +DEM + + D + + LID +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
C + +A LV+++ + G PD YN ++ C +A+ + K+++++G++PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
TY LI GL K GR+++A+ + ++ GY YT ++NG C++G AL+L+ +
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
ME+ G P+ TY ++ L + DKG +L M + G+
Sbjct: 361 MEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 175/343 (51%), Gaps = 17/343 (4%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR--IPPNAVTYTSLIYGFCIV--GQLQQA 74
D+ + +++ S +V+D L+ ++ + P T+ L+ C +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+LN M+ ++ + T +I V +LC+ G V EAK++ + ++ P+T +Y+ L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 135 YCLVKE-------VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
C K+ V++ +D F+ V PD+ S+TI+I+ +C K + EA L+ ++
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D YN+++ G C L + S+A + +M G PD ITYN L+ L K+ V+
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A +K + D G +PD TYT L++G+C+ G A + +++ +G Y ++
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+G CK L D+ + L M+SSG ++ Y ++R+L + G+
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGK 420
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 15/334 (4%)
Query: 17 KPDVVMYTTIIDSLCK--DKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
+P + ++ C+ D +S+ + + + MV + P+ VT + C G++ +A
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGN-------VKEAKNVFAVMMKQGVKPNTVS 127
L+ E+ K + +T+N L+ LCK + V E ++ F VKP+ VS
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF------DVKPDLVS 232
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L+D C K + +A + + + G PD Y I+ G C + EA + +M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
E + D I YN+LI GL K GR+ +A + M G PD TY L++ +C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A++L++E++ +G P+ TY L+ GLCK + E+++ + G + Y ++
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
K G EA + S + DA Y +
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 136/248 (54%), Gaps = 10/248 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKPD+V +T +ID++C K + +A L S++ P+ Y +++ GFC + + +AV
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
G+ +M + ++ + T+N L+ L K G V+EA+ M+ G +P+T +Y+SLM+G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C E A + M RG +P+ +Y +++GLCK +++D+ +L + M S + ++
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
Y +L+ L K G++++A+++ + + D Y+ L + + +K+
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL----------ETTLKWLKK 455
Query: 256 IQDQGIKP 263
++QG+ P
Sbjct: 456 AKEQGLVP 463
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ + V+PD + Y T+I L K V +A MV P+ TYTSL+ G C G+
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
A+ LL EM + T+N L+ LCK + + ++ +M GVK + Y++
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
L+ +V +A ++F+ V D +Y+ + L +K E
Sbjct: 411 LVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 168/333 (50%), Gaps = 6/333 (1%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
G +E +R+ QL++P+ ++ ++ +V A ++ EM P+
Sbjct: 163 FGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYV 220
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ L+ C G ++ A L +M + R V + F L+ C+ G + EAK V M
Sbjct: 221 FGCLLDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ G +P+ V Y++L+ GY ++ A D+ M +RG P+ YT++I LCK+ ++
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
EA K+ EM + AD + Y +L+ G CK G+I + ++++M +G P +TY ++
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
K + ++ + L+++++ PD+ Y ++I CK+G +K+A ++ ++ G +
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
V + +MING +G EA +M + G
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 6/351 (1%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT---YTSLIYGFCIVGQLQQAVG 76
+ +Y +++ L K + + L EM ++ P + + L+ F +++A+
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+L+EM + + + F L+DALCK G+VK+A +F M + N ++SL+ G+C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWC 263
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V ++ +AK + M + G PD+ YT +++G + +A+ LL +M +
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
CY LI LCK+ R+ +A K+ EM DV+TY L+ CK +DK ++ ++
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G+ P TY ++ K ++ E+ + + Y+ + Y V+I CK G
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
EA+ L ++ME +G P T+ I+I L +G + +EMV RGL
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD+V YT ++ ++DAYDL +M + PNA YT LI C V ++++A+
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ EM + +V T+ LV CK G + + V M+K+G+ P+ ++Y +M +
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ + ++ M + PD+ Y ++I CK+ V EA +L +EM +
Sbjct: 404 KKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVD 463
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRG--TPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ +I+GL G + +A EM RG + T LL+ + K ++ A +
Sbjct: 464 TFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWS 523
Query: 255 EIQDQGI-KPDVFTYTILIDGLCKVGRLKDA 284
I +G + +V ++TI I L G K+A
Sbjct: 524 CITSKGACELNVLSWTIWIHALFSKGYEKEA 554
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 162/300 (54%), Gaps = 2/300 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIP-PNAVTYTSLIYGFCIVGQLQQA 74
++P+ ++ ++ CK+ ++ A+ + EM I PN++TY++L+ + ++A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 75 VGLLNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
V L +MI K + + TFN++++ C+ G V+ AK + M K G PN +YS+LM+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
G+C V ++ +AK F+ + K G+ D YT ++N C+ DEA KLL EM + + A
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
DT+ YN ++ GL GR +A +++++ G + +Y +L+ LC + ++KA+ +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
+ ++GI P T+ L+ LC+ G + + L G +++ ++ CKE
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 149/277 (53%), Gaps = 2/277 (0%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVK-PNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
FNILV CK G++ A V M + G+ PN+++YS+LMD +A ++F M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 152 V-KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
+ K G+SPD ++ ++ING C+ V+ A K+LD M + Y++L++G CK+G+
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
I +A + +E+ G D + Y L++ C++ D+A+ L+ E++ + D TY +
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
++ GL GR ++A ++ +G ++ +Y +++N C G ++A+ +S M G
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
P T+ ++ L E G + G ++L + GL+
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 167/337 (49%), Gaps = 11/337 (3%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR---IPPNAVTYTSLIYGFCIVGQLQ 72
VKP + +T ++ L V+ + L + AK + PN + L+ C G +
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLL--LYAKHNLGLQPNTCIFNILVKHHCKNGDIN 213
Query: 73 QAVGLLNEMILKRMDVEVH---TFNILVDALCKEGNVKEAKNVFAVMM-KQGVKPNTVSY 128
A ++ EM KR + T++ L+D L KEA +F M+ K+G+ P+ V++
Sbjct: 214 FAFLVVEEM--KRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTF 271
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ +++G+C EV +AK I + M K G +P+V +Y+ ++NG CK+ + EA + DE+
Sbjct: 272 NVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKK 331
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ DT+ Y +L++ C+ G +A KL+ EM D +TYN +L L ++
Sbjct: 332 TGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ ++ + +G+ + +Y I+++ LC G L+ A + + +G + ++
Sbjct: 392 ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
C+ G + + ++ G +P ++ ++ ++
Sbjct: 452 RLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 151/268 (56%), Gaps = 7/268 (2%)
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR--GVSPDVQSY 163
V E N+ V+ + VKP+ + S+ ++ EVN ++ + L K G+ P+ +
Sbjct: 143 VMEMFNLIQVIAR--VKPSLNAISTCLNLLIDSGEVNLSRKLL-LYAKHNLGLQPNTCIF 199
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKI-IADTICYNSLIDGLCKLGRISDAWKLVNEM- 221
I++ CK ++ A+ +++EM I ++I Y++L+D L R +A +L +M
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G PD +T+N +++ C++ V++A ++ ++ G P+V+ Y+ L++G CKVG++
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
++A++ F ++ G + YT ++N +C+ G DEA+ L+ +M++S D +TY +I
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 342 IRALFEKGENDKGEKLLREMVARGLLYN 369
+R L +G +++ ++L + + G+ N
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+++ ++ + PD V + +I+ C+ V A + M PN Y++L+ GFC V
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV 316
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G++Q+A +E+ + ++ + L++ C+ G EA + M + +T++Y
Sbjct: 317 GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++ G +A + + GV + SY II+N LC +++A K L M
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE 436
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
I +N L+ LC+ G +++ G P ++ +++ +CK +
Sbjct: 437 RGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVH 496
Query: 249 AIALIKEI 256
L+ +
Sbjct: 497 VFELLDSL 504
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 2 GETSAA---LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
GE A L+ +++ P+V Y+ +++ CK + +A + E+ + + V Y
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ FC G+ +A+ LL EM R + T+N+++ L EG +EA +
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+GV N SY +++ C E+ KA ++M +RG+ P ++ ++ LC+ +
Sbjct: 402 EGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEI 461
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
++L +I + ++++ +CK ++ ++L++ +
Sbjct: 462 GVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 196/372 (52%), Gaps = 10/372 (2%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G S+ + + + K D + + +I++ + + DA +M + P TY +L
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEV----HTFNILVDALCKEGNVKEAKNVFAVMM 117
I G+ I G+ +++ LL+ ++L+ +V+V TFN+LV A CK+ V+EA V M
Sbjct: 157 IKGYGIAGKPERSSELLD-LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKD--IFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+ GV+P+TV+Y+++ Y E +A+ + +++K P+ ++ I++ G C+
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
V + + + M ++ A+ + +NSLI+G ++ +++ M DVITY+
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYST 335
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+++ + ++KA + KE+ G+KPD Y+IL G + K A+E+ + ++++
Sbjct: 336 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES 395
Query: 296 Y-NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
NV + +T +I+G+C G D+A+ + +KM G P+ T+E ++ E + K
Sbjct: 396 RPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 453
Query: 355 EKLLREMVARGL 366
E++L+ M G+
Sbjct: 454 EEVLQMMRGCGV 465
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L++ VK DV+ Y+T++++ + A ++ EMV + P+A Y+ L G+
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ ++A LL +I++ V F ++ C G++ +A VF M K GV PN +
Sbjct: 378 AKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ +LM GY VK+ KA+++ +M GV P+ ++ ++ + DE+ K ++ +
Sbjct: 437 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Query: 188 SEKI 191
+ I
Sbjct: 497 CKDI 500
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 40/405 (9%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ALE+ ++ V PD+V + ++ + + S A + M ++ P+ T+
Sbjct: 95 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVM 116
+IY +GQ QA+ L N M KR + +V TF ++ +G ++ + VF M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ +G+KPN VSY++LM Y + A + + + G+ PDV SYT ++N + +
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT---- 232
+A ++ M E+ + + YN+LID G +++A ++ +M G P+V++
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 233 -------------------------------YNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
YN + + ++KAIAL + ++ + +
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
K D T+TILI G C++ + +A +++ +T + Y+ ++ Y K+G EA +
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ ++M+ +G PD + Y ++ A + K +L EM A G+
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 174/354 (49%), Gaps = 6/354 (1%)
Query: 1 MGETSAALELL-----RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNA 55
+G++S AL+L +R +PDVV +T+I+ + + ++ MVA+ + PN
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
V+Y +L+ + + G A+ +L ++ + +V ++ L+++ + +AK VF +
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M K+ KPN V+Y++L+D Y + +A +IF M + G+ P+V S ++ + K
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+L S I +T YNS I + A L M + D +T+
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ C+ +AI+ +KE++D I Y+ ++ K G++ +A+ IF + + G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
V AYT M++ Y +A L +ME++G PD++ ++RA F KG
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA-FNKG 516
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 162/350 (46%), Gaps = 2/350 (0%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+Y +I + V A L+ EM P+A TY +LI GQ + A+ L+++M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ + T+N L++A GN +EA V M GV P+ V+++ ++ Y ++
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI--IADTICYN 199
+KA F LM V PD ++ III L K+ +A L + M ++ D + +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
S++ G I + + M G P++++YN L+ A++++ +I+
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
GI PDV +YT L++ + + A+E+F + + V Y +I+ Y G EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ + +ME G P+ V+ ++ A + + +L +RG+ N
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 362
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 179/403 (44%), Gaps = 38/403 (9%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G + AL +L ++ + PDVV YT +++S + + A +++ M +R PN VTY
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI + G L +AV + +M + V + L+ A + V +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ NT +Y+S + Y E+ KA ++ M K+ V D ++TI+I+G C++ E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A L EM I Y+S++ K G++++A + N+M G PDVI Y +L
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR----------LKDAQ--- 285
S KA L E++ GI+PD + L+ K G+ +++ +
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 536
Query: 286 ------EIFQDI-----------LIKGYNVTVQAYTV-----MINGYCKEGLCDEALALI 323
EIF LI+ + + + ++ M++ + K G + + L
Sbjct: 537 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 596
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
K+ +SG + TY I++ L G K ++L M G+
Sbjct: 597 YKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 639
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 164/394 (41%), Gaps = 36/394 (9%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT---- 57
G+ ++R++ KP+VV Y +ID+ + +++A +++ +M I PN V+
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 58 -------------------------------YTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
Y S I + +L++A+ L M K++
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
+ TF IL+ C+ EA + M + YSS++ Y +V +A+
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
IFN M G PDV +YT +++ + +A +L EM + I D+I ++L+
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 514
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K G+ S+ + L++ M + P + + +AI LI+ + +
Sbjct: 515 KGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG 574
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
++ K G+++ ++F I+ G + ++ Y +++ G + + ++ M
Sbjct: 575 LTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWM 634
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+G P Y II + E+ + E L+R+
Sbjct: 635 SGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQ 667
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 40/405 (9%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ALE+ ++ V PD+V + ++ + + S A + M ++ P+ T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVM 116
+IY +GQ QA+ L N M KR + +V TF ++ +G ++ + VF M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ +G+KPN VSY++LM Y + A + + + G+ PDV SYT ++N + +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT---- 232
+A ++ M E+ + + YN+LID G +++A ++ +M G P+V++
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 233 -------------------------------YNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
YN + + ++KAIAL + ++ + +
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
K D T+TILI G C++ + +A +++ +T + Y+ ++ Y K+G EA +
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ ++M+ +G PD + Y ++ A + K +L EM A G+
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 174/354 (49%), Gaps = 6/354 (1%)
Query: 1 MGETSAALELL-----RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNA 55
+G++S AL+L +R +PDVV +T+I+ + + ++ MVA+ + PN
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
V+Y +L+ + + G A+ +L ++ + +V ++ L+++ + +AK VF +
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M K+ KPN V+Y++L+D Y + +A +IF M + G+ P+V S ++ + K
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+L S I +T YNS I + A L M + D +T+
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ C+ +AI+ +KE++D I Y+ ++ K G++ +A+ IF + + G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
V AYT M++ Y +A L +ME++G PD++ ++RA F KG
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA-FNKG 648
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 162/350 (46%), Gaps = 2/350 (0%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+Y +I + V A L+ EM P+A TY +LI GQ + A+ L+++M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ + T+N L++A GN +EA V M GV P+ V+++ ++ Y ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI--IADTICYN 199
+KA F LM V PD ++ III L K+ +A L + M ++ D + +
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
S++ G I + + M G P++++YN L+ A++++ +I+
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
GI PDV +YT L++ + + A+E+F + + V Y +I+ Y G EA
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ + +ME G P+ V+ ++ A + + +L +RG+ N
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 494
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 179/403 (44%), Gaps = 38/403 (9%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G + AL +L ++ + PDVV YT +++S + + A +++ M +R PN VTY
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI + G L +AV + +M + V + L+ A + V +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G+ NT +Y+S + Y E+ KA ++ M K+ V D ++TI+I+G C++ E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A L EM I Y+S++ K G++++A + N+M G PDVI Y +L
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR----------LKDAQ--- 285
S KA L E++ GI+PD + L+ K G+ +++ +
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 668
Query: 286 ------EIFQDI-----------LIKGYNVTVQAYTV-----MINGYCKEGLCDEALALI 323
EIF LI+ + + + ++ M++ + K G + + L
Sbjct: 669 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 728
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
K+ +SG + TY I++ L G K ++L M G+
Sbjct: 729 YKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 771
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 164/394 (41%), Gaps = 36/394 (9%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT---- 57
G+ ++R++ KP+VV Y +ID+ + +++A +++ +M I PN V+
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 58 -------------------------------YTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
Y S I + +L++A+ L M K++
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
+ TF IL+ C+ EA + M + YSS++ Y +V +A+
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
IFN M G PDV +YT +++ + +A +L EM + I D+I ++L+
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 646
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K G+ S+ + L++ M + P + + +AI LI+ + +
Sbjct: 647 KGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG 706
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
++ K G+++ ++F I+ G + ++ Y +++ G + + ++ M
Sbjct: 707 LTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWM 766
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+G P Y II + E+ + E L+R+
Sbjct: 767 SGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQ 799
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 11/365 (3%)
Query: 3 ETSAALELLRRQLVKPDVV----MYTTIIDSLCKDKLVSDAYDLYSEMV-AKRIPPNAVT 57
S ALE R P + Y + LC + Y L EM + +PP+
Sbjct: 55 SASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAI 114
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV-M 116
+ ++I GF +++ + +++ + + + FN ++D L KE ++ A+ F M
Sbjct: 115 FVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKM 173
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
M G+ + +Y LM G L + + +M GV+P+ Y +++ LCK V
Sbjct: 174 MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
A L+ EM + + +N LI C ++ + L+ + G PDV+T +
Sbjct: 234 GRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
++VLC V +A+ +++ ++ +G K DV L+ G C +G+++ AQ F ++ KGY
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY 349
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
V+ Y ++I GYC G+ D AL + M++ + T+ +IR L G D G K
Sbjct: 350 LPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLK 409
Query: 357 LLREM 361
+L M
Sbjct: 410 ILEMM 414
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 39/402 (9%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ L++++ V P+ V+Y T++ +LCK+ V A L SEM PN VT+
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI +C +L Q++ LL + +V T +++ LC EG V EA V + +G
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
K + V+ ++L+ GYC + ++ A+ F M ++G P+V++Y ++I G C + M+D A
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT-------PPDVITY 233
++M ++ I + +N+LI GL GR D K++ M T P + + Y
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIY 433
Query: 234 N--------PLLDVLCK-----SHNVDKAIALI-----------KEIQDQ----GIKPDV 265
L+ L K VD++ LI K DQ G P +
Sbjct: 434 GFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSI 493
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
LI + G+++++ E+ D++ +GY + +I G+CK+ + +
Sbjct: 494 IVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVED 553
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
M G +PD +Y ++ L KG+ K L MV + ++
Sbjct: 554 MAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 9/316 (2%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
TY +L + C+ + LL+EM + + F ++ + +K +V +
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKE-VNKAKDIFNL-MVKRGVSPDVQSYTIIINGLCKI 173
+ K G+KP+ ++S++D LVKE ++ A++ F M+ G+ DV +Y I++ GL
Sbjct: 138 VSKFGIKPSLKVFNSILD--VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLT 195
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+ + +KLL M + + + + YN+L+ LCK G++ A L++EM P+ +T+
Sbjct: 196 NRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTF 251
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N L+ C + +++ L+++ G PDV T T +++ LC GR+ +A E+ + +
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
KG V V A ++ GYC G A +ME G +P+ TY ++I + G D
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 354 GEKLLREMVARGLLYN 369
+M + +N
Sbjct: 372 ALDTFNDMKTDAIRWN 387
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 38/309 (12%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G S ALE+L R + K DVV T++ C + A + EM K PN TY
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI G+C VG L A+ N+M + TFN L+ L G + + +M
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 119 ----QGVK-------------------------------PNTVSYSSLMDGYCLVKEVNK 143
G + P V S + C ++
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
K ++ M+ G P + +I+ + ++E+ +L+++M + + + +N++I
Sbjct: 477 LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVII 536
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G CK ++ + K V +M RG PD +YNPLL+ LC ++ KA L + ++ I P
Sbjct: 537 GFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596
Query: 264 DVFTYTILI 272
D ++ L+
Sbjct: 597 DPSMWSSLM 605
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ R+ P+V Y +I C ++ A D +++M I N T+ +LI G I G+
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 71 LQQAVGLLNEM--------------------------------ILKRMDVEVHTFNILVD 98
+ +L M L +M+ F VD
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME---KLFPRAVD 460
Query: 99 ------ALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
+LC++G + + K + M+ +G P+ + L+ Y ++ ++ ++ N MV
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
RG P ++ +I G CK V K +++M + DT YN L++ LC G I
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
AW L + M + PD ++ L+ C S AI + +QD
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQKT--AIHVNSSLQD 622
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 7/319 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KP V ++ SLC K V+ A + + + I P+A TY+ L+ G+ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ +EM+ + V++ +N L+DALCK G+V +F M G+KP+ S++ + Y
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C +V+ A + + M + + P+V ++ II LCK + VD+A+ LLDEM + DT
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YNS++ C ++ A KL++ M PD TYN +L +L + D+A + +
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 256 IQDQGIKPDVFTYTILIDGLC-KVGRLKDAQEIFQDILIKG---YNVTVQAYTVMINGYC 311
+ ++ P V TYT++I GL K G+L++A F+ ++ +G Y+ TV+ + G+
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW- 467
Query: 312 KEGLCDEALALISKMESSG 330
G D L KME S
Sbjct: 468 --GQMDVVDVLAGKMERSS 484
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 46 MVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR----MDVEVHTFNILVDALC 101
+ A+RIP A + S I+G +Q L + +I R ++ F I+ A
Sbjct: 90 LWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYS 149
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
+ EA F M++ G+KP L+ C K VN A++ F G+ P +
Sbjct: 150 RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK 209
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+Y+I++ G +I+ A K+ DEM + D + YN+L+D LCK G + +K+ EM
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
+ G PD ++ + C + +V A ++ ++ + P+V+T+ +I LCK ++
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
DA + +++ KG N Y ++ +C + A L+S+M+ + +PD TY ++
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV 389
Query: 342 IRALFEKGENDKGEKLLREMVAR 364
++ L G D+ ++ M R
Sbjct: 390 LKLLIRIGRFDRATEIWEGMSER 412
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 157/332 (47%), Gaps = 1/332 (0%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
++ + + + L S+A ++ MV I P L++ C + A +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ T++ILV + + A+ VF M+++ + ++Y++L+D C +V
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+ +F M G+ PD S+ I I+ C V A+K+LD M ++ + +N +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
I LCK ++ DA+ L++EM +G PD TYN ++ C V++A L+ +
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC-KEGLCDEAL 320
PD TY +++ L ++GR A EI++ + + + TV YTVMI+G K+G +EA
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
M G P + T E++ L G+ D
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ ++R + P+V + II +LCK++ V DAY L EM+ K P+ TY S++ C
Sbjct: 301 LDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD 360
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
++ +A LL+ M + + HT+N+++ L + G A ++ M ++ P +
Sbjct: 361 HCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
Query: 128 YSSLMDGYCLVK-EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
Y+ ++ G K ++ +A F +M+ G+ P + ++ N L +D
Sbjct: 421 YTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 9/261 (3%)
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDI------FNLMVKR--GVSPDVQSYTIIING 169
K ++ V+YS + + + + + K++ F L +R + ++SY I++
Sbjct: 52 KDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEI 111
Query: 170 LCKIKMVDEAWKLLDEMHSEKIIA-DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
L K W L E + + + + S+A + N M G P
Sbjct: 112 LGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKP 171
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
V + LL LC +V+ A + + GI P TY+IL+ G ++ A+++F
Sbjct: 172 CVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVF 231
Query: 289 QDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
++L + V + AY +++ CK G D + +M + G PDA ++ I I A +
Sbjct: 232 DEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDA 291
Query: 349 GENDKGEKLLREMVARGLLYN 369
G+ K+L M L+ N
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPN 312
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +I+SL K K + L +M AK++ T+ + + ++++A+G ++M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+E FN ++D L K NV +A+ VF M K+ +P+ SY+ L++G+ +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+ ++ M G PDV +Y IIIN CK K +EA + +EM + SLI
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
+GL +++DA + G P + TYN L+ C S ++ A + E++ +G+
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P+ TY I++ L ++ R K+A E++Q + + TV Y +M+ +C + D A+ +
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKI 426
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+M+ G +P + +I AL + + D+ + EM+ G+
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ + ++++ +PD+ YT +++ ++ + ++ EM + P+ V Y
Sbjct: 213 VGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGI 272
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I C + ++A+ NEM + H F L++ L E + +A F G
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+Y++L+ YC + + A + M +GV P+ ++Y II++ L +++ EA+
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++ M E ++ Y ++ C R+ A K+ +EM +G P + ++ L+ L
Sbjct: 393 EVYQTMSCEPTVS---TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
C + +D+A E+ D GI+P ++ L L GR
Sbjct: 450 CHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PDVV Y II++ CK K +A ++EM + P+ + SLI G +L A+
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+E T+N LV A C +++A M +GV PN +Y ++
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ +A +++ M P V +Y I++ C + +D A K+ DEM + ++
Sbjct: 384 RMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
++SLI LC ++ +A + NEM G P ++ L L DK L+
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 34/248 (13%)
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA------------------- 193
++G +Y +I L KIK W L+D+M ++K+++
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 194 ---------------DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++ +N ++D L K + DA K+ ++M + PD+ +Y LL+
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
+ N+ + + +E++D+G +PDV Y I+I+ CK + ++A F ++ +
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ + +ING E ++AL + +SSG +A TY ++ A + K +
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 359 REMVARGL 366
EM +G+
Sbjct: 361 DEMRLKGV 368
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KP ++ ++I+ L +K ++DA + + + P A TY +L+ +C +++ A
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
++EM LK + T++I++ L + KEA V+ M +P +Y ++ +C
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 415
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ ++ A I++ M +GV P + ++ +I LC +DEA + +EM I
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEM 221
++ L L GR LV +M
Sbjct: 476 MFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G++ A + N + ++V+++ L+ A G +EA NVF M + G KP ++Y
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 129 SSLMDGYC-LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ +++ + + NK + M G++PD +Y +I + + EA ++ +EM
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D + YN+L+D K R +A K++NEM G P ++TYN L+ + +D
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
+A+ L ++ ++G KPDVFTYT L+ G + G+++ A IF+++ G + + I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
Y G E + + ++ G PD VT+ ++ + G + + + +EM G +
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 168/345 (48%), Gaps = 3/345 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ-LQQAVGL 77
DV YT++I + +A +++ +M P +TY ++ F +G + L
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNV-KEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ +M + + +T+N L+ CK G++ +EA VF M G + V+Y++L+D Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+A + N MV G SP + +Y +I+ + M+DEA +L ++M + D
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y +L+ G + G++ A + EM + G P++ T+N + + + + + EI
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
G+ PD+ T+ L+ + G + +F+++ G+ + + +I+ Y + G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
++A+ + +M +G PD TY ++ AL G ++ EK+L EM
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 169/385 (43%), Gaps = 35/385 (9%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
KPDV YTT++ + V A ++ EM PN T+ + I + G+ + +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ +E+ + + ++ T+N L+ + G E VF M + G P ++++L+ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+A ++ M+ GV+PD+ +Y ++ L + M +++ K+L EM + +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 196 ICYNSLIDGLC-----------------------------------KLGRISDAWKLVNE 220
+ Y SL+ K + +A + +E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
+ RG PD+ T N ++ + + V KA ++ ++++G P + TY L+ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++EI ++IL KG + +Y +I YC+ +A + S+M +SG +PD +TY
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 341 IIRALFEKGENDKGEKLLREMVARG 365
I + ++ ++R M+ G
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHG 764
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 165/334 (49%), Gaps = 11/334 (3%)
Query: 17 KPDVVMYTTIIDSLCK-----DKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL 71
KP ++ Y I++ K +K+ S L +M + I P+A TY +LI C G L
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITS----LVEKMKSDGIAPDAYTYNTLI-TCCKRGSL 294
Query: 72 -QQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
Q+A + EM + T+N L+D K KEA V M+ G P+ V+Y+S
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ Y +++A ++ N M ++G PDV +YT +++G + V+ A + +EM +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ +N+ I G+ ++ K+ +E++ G PD++T+N LL V ++ +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ KE++ G P+ T+ LI + G + A +++ +L G + Y ++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ G+ +++ ++++ME P+ +TY ++ A
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 155/327 (47%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PD+V + T++ ++ + S+ ++ EM P T+ +LI + G +QA+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ M+ + ++ T+N ++ AL + G ++++ V A M KPN ++Y SL+ Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
KE+ + + + P ++ K ++ EA + E+ D
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
NS++ + ++ A +++ M RG P + TYN L+ + +S + K+ +++E
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
I +GIKPD+ +Y +I C+ R++DA IF ++ G V Y I Y + +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 316 CDEALALISKMESSGRMPDAVTYEIII 342
+EA+ ++ M G P+ TY I+
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 166/342 (48%), Gaps = 1/342 (0%)
Query: 26 IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR 85
II L K+ VS A ++++ + + +YTSLI F G+ ++AV + +M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 86 MDVEVHTFNILVDALCKEGNV-KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
+ T+N++++ K G + ++ M G+ P+ +Y++L+ +A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
+F M G S D +Y +++ K EA K+L+EM + YNSLI
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
+ G + +A +L N+M +GT PDV TY LL ++ V+ A+++ +E+++ G KP+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
+ T+ I G+ + +IF +I + G + + + ++ + + G+ E +
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+M+ +G +P+ T+ +I A G ++ + R M+ G+
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 169/399 (42%), Gaps = 35/399 (8%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E + E ++ D V Y ++D K +A + +EMV P+ VTY SLI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ G L +A+ L N+M K +V T+ L+ + G V+ A ++F M G K
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN ++++ + Y + + IF+ + G+SPD+ ++ ++ + M E +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
EM + + +N+LI + G A + M G PD+ TYN +L L +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC-------------------------- 276
+++ ++ E++D KP+ TY L+
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 277 ---------KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
K L +A+ F ++ +G++ + M++ Y + + +A ++ M+
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G P TY ++ + K E++LRE++A+G+
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 143/287 (49%)
Query: 5 SAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
++ +E ++ + PD Y T+I + L +A ++ EM A + VTY +L+
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ + ++A+ +LNEM+L + T+N L+ A ++G + EA + M ++G KP+
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+Y++L+ G+ +V A IF M G P++ ++ I E K+ D
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
E++ + D + +N+L+ + G S+ + EM G P+ T+N L+ +
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
+ ++A+ + + + D G+ PD+ TY ++ L + G + ++++ ++
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 38/295 (12%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A+ + RR L V PD+ Y T++ +L + + + + +EM R PN +TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 59 TSLIYGFC---------------IVGQLQQAVGLLNEMIL-------------------- 83
SL++ + G ++ LL ++L
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ ++ T N +V + V +A V M ++G P+ +Y+SLM + + K
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
+++I ++ +G+ PD+ SY +I C+ + +A ++ EM + I+ D I YN+ I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
+A +V M G P+ TYN ++D CK + D+A ++++++
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 78/145 (53%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ + + L+ ++ + P + Y +++ + + ++ E++AK I P+ ++Y +
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+IY +C +++ A + +EM + +V T+N + + + +EA V M+K G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAK 145
+PN +Y+S++DGYC + ++AK
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++ +L K V A + +Q+ G DV++YT LI GR ++A +F+ + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 296 YNVTVQAYTVMINGYCKEGL-CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
T+ Y V++N + K G ++ +L+ KM+S G PDA TY +I + +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 355 EKLLREMVARGLLYN 369
++ EM A G Y+
Sbjct: 299 AQVFEEMKAAGFSYD 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
I+I L K GR+ A +F + G+++ V +YT +I+ + G EA+ + KME
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 330 GRMPDAVTYEIIIRALFEKGEN-DKGEKLLREMVARGL 366
G P +TY +I+ + G +K L+ +M + G+
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 5/328 (1%)
Query: 40 YDLYSEMVAKR----IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
++L +++AK P +T LI + ++ + +M+ + N
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 96 LVDAL-CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
++D L G +++A +F GV PNT SY+ LM +CL +++ A +F M++R
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
V PDV SY I+I G C+ V+ A +LLD+M ++ + D + Y +L++ LC+ ++ +A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+KL+ M +G PD++ YN ++ C+ A ++ ++ G P+ +Y LI G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
LC G + ++ ++++ KG++ ++ G+C G +EA ++ + +G
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMV 362
+ T+E++I + + E++K + L + V
Sbjct: 400 SDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 137/275 (49%), Gaps = 7/275 (2%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A EL R V P+ Y ++ + C + +S AY L+ +M+ + + P+ +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI GFC GQ+ A+ LL++M+ K + ++ L+++LC++ ++EA + M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G P+ V Y++++ G+C A+ + + M+ G SP+ SY +I GLC M DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
K L+EM S+ N L+ G C G++ +A +V + G T+ ++
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
++C +K IK + +K ++ T ++D
Sbjct: 409 LICNEDESEK----IKLFLEDAVKEEITGDTRIVD 439
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 1/260 (0%)
Query: 18 PDVVMYTTIIDSLCKDK-LVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
P I+D L + + A++L+ + PN +Y L+ FC+ L A
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +M+ + + +V ++ IL+ C++G V A + M+ +G P+ +SY++L++ C
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC 271
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ +A + M +G +PD+ Y +I G C+ +A K+LD+M S +++
Sbjct: 272 RKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y +LI GLC G + K + EM +G P N L+ C V++A +++ +
Sbjct: 332 SYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 391
Query: 257 QDQGIKPDVFTYTILIDGLC 276
G T+ ++I +C
Sbjct: 392 MKNGETLHSDTWEMVIPLIC 411
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 155/309 (50%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
+Y L+ F G+ + L++EM+ TFN+L+ + + G K+A F
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+P SY+++++ VK+ + ++ M++ G SPDV +Y I++ ++ +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
D +L DEM + D+ YN L+ L K + A +N M G P V+ Y L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+D L ++ N++ + E+ G +PDV YT++I G G L A+E+F+++ +KG
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
V Y MI G C G EA L+ +MES G P+ V Y ++ L + G+ + K
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 357 LLREMVARG 365
++REMV +G
Sbjct: 451 VIREMVKKG 459
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P Y I++SL K +Y +M+ P+ +TY L++ +G++ +
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +EM + +T+NIL+ L K A M + G+ P+ + Y++L+DG
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ K + MVK G PDV YT++I G +D+A ++ EM + + +
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YNS+I GLC G +A L+ EM RG P+ + Y+ L+ L K+ + +A +I+E+
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Query: 257 QDQG 260
+G
Sbjct: 456 VKKG 459
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P +Y +++ V Q + + +M+ +V T+NIL+ + G + +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK---AKDIFNLMVKRGVSPDVQSYTIIING 169
F M + G P++ +Y+ L+ ++ + NK A N M + G+ P V YT +I+G
Sbjct: 277 FDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 170 LCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD 229
L + ++ LDEM D +CY +I G G + A ++ EM +G P+
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
V TYN ++ LC + +A L+KE++ +G P+ Y+ L+ L K G+L +A+++ +
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Query: 290 DILIKGYNV 298
+++ KG+ V
Sbjct: 454 EMVKKGHYV 462
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P V+ YTT+ID L + + EMV P+ V YT +I G+ + G+L +A
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ EM +K V T+N ++ LC G +EA + M +G PN V YS+L+
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 136 CLVKEVNKAKDIFNLMVKRG 155
++++A+ + MVK+G
Sbjct: 440 RKAGKLSEARKVIREMVKKG 459
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R PD Y ++ L K A + M I P+ + YT+LI G G L+
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
L+EM+ +V + +++ G + +AK +F M +G PN +Y+S++
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
G C+ E +A + M RG +P+ Y+ +++ L K + EA K++ EM
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 174/334 (52%), Gaps = 2/334 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P +++ +I+ + KL S A ++ EM R + SL+ G+L++
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L+ I + + T+NIL+ + G +A +F M+K+ VKP V++ +L+ G C
Sbjct: 141 LSS-IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 138 VKEVNKAKDIFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V +A + + M+K GV P V Y +I LC+I + A+KL DE + KI D
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y++LI L K GR ++ ++ EM +G PD +TYN L++ C ++ + A ++ E+
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
++G+KPDV +Y +++ ++ + ++A +F+D+ +G + +Y ++ +G C+
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+EA ++ +M G P E ++ L E G+
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 12/374 (3%)
Query: 3 ETSAALELLR---------RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIP 52
+ SAA++L R ++ + ++ Y II L K+ + + + RI
Sbjct: 21 DPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIV 80
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P + + ++I F +A+ + +EM R V + N L+ AL K G +++ K
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
+ + + G KP+ +Y+ L+ G + A +F+ MVK+ V P ++ +I+GLCK
Sbjct: 141 LSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 173 IKMVDEAWKLLDEMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
V EA K+ +M + T+ Y SLI LC++G +S A+KL +E + D
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
Y+ L+ L K+ ++ +++E+ ++G KPD TY +LI+G C + A + ++
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
+ KG V +Y +++ + + +EA L M G PD ++Y I+ L E +
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Query: 352 DKGEKLLREMVARG 365
++ +L EM+ +G
Sbjct: 380 EEAAVILDEMLFKG 393
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 130/245 (53%), Gaps = 1/245 (0%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L+ V+P V +Y ++I +LC+ +S A+ L E +I +A Y++LI
Sbjct: 212 DMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA 271
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G+ + +L EM K + T+N+L++ C E + + A V M+++G+KP+ +SY
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ ++ + +K+ +A +F M +RG SPD SY I+ +GLC+ +EA +LDEM
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ + LC+ G++ K+++ + HRG D ++ ++ +CK +
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISD 450
Query: 249 AIALI 253
+I L+
Sbjct: 451 SIDLL 455
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D YN LI G + G DA KL +EM + P +T+ L+ LCK V +A+ +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 254 KE-IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+ ++ G++P V Y LI LC++G L A ++ + V Y+ +I+ K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G +E ++ +M G PD VTY ++I + +++ ++L EMV +GL
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E S LE + + KPD V Y +I+ C + A + EMV K + P+ ++Y ++
Sbjct: 276 EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F + + ++A L +M + + ++ I+ D LC+ +EA + M+ +G K
Sbjct: 336 GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P + C ++ + + + RG++ D ++++I +CK ++ ++ L
Sbjct: 396 PRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISDSIDL 454
Query: 183 L 183
L
Sbjct: 455 L 455
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 179/340 (52%), Gaps = 2/340 (0%)
Query: 8 LELLRRQL-VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
+ ++RQ+ KP+ +YT +I L ++ L+ +++ EM ++ + + +YT+LI +
Sbjct: 128 FKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYG 187
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNT 125
G+ + ++ LL+ M +++ + T+N +++A + G + + +FA M +G++P+
Sbjct: 188 RNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI 247
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V+Y++L+ + ++A+ +F M G+ PD+ +Y+ ++ K++ +++ LL E
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M S + D YN L++ K G I +A + ++M G P+ TY+ LL++ +S
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
D L E++ PD TY ILI+ + G K+ +F D++ + ++ Y
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+I K GL ++A ++ M ++ +P + Y +I A
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 171/358 (47%), Gaps = 3/358 (0%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL-- 71
Q V V YT +I++ ++ + +L M ++I P+ +TY ++I C G L
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDW 228
Query: 72 QQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSL 131
+ +GL EM + + ++ T+N L+ A G EA+ VF M G+ P+ +YS L
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
++ + ++ + K D+ M G PD+ SY +++ K + EA + +M +
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+ Y+ L++ + GR D +L EM T PD TYN L++V + + +
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
L ++ ++ I+PD+ TY +I K G +DA++I Q + + +AYT +I +
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ L +EAL + M G P T+ ++ + G + E +L +V G+ N
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 7/276 (2%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
H + I++ L +EG + + VF M QGV + SY++L++ Y + ++ +
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWK----LLDEMHSEKIIADTICYNSLIDGLC 206
M +SP + +Y +IN C +D W+ L EM E I D + YN+L+
Sbjct: 202 MKNEKISPSILTYNTVINA-CARGGLD--WEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
G +A + M+ G PD+ TY+ L++ K ++K L+ E+ G PD+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
+Y +L++ K G +K+A +F + G Y+V++N + + G D+ L +M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+SS PDA TY I+I E G + L +MV
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 148/332 (44%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R + ++PD+V Y T++ + L +A ++ M I P+ TY+ L+ F + +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L++ LL EM ++ ++N+L++A K G++KEA VF M G PN +YS
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++ + + + +F M PD +Y I+I + E L +M E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I D Y +I K G DA K++ M P Y +++ ++ ++A+
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ + G P + T+ L+ + G +K+++ I ++ G + I Y
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+ G +EA+ ME S PD T E ++
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 158/351 (45%), Gaps = 1/351 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+ Y+ +++ + D L+ EM + P+A TY LI F G ++ V L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
++M+ + ++ ++ T+ ++ A K G ++A+ + M + P++ +Y+ +++ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+A FN M + G +P ++++ ++ + +V E+ +L + I +
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+N+ I+ + G+ +A K +M PD T +L V + VD+ +E++
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMK 589
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING-YCKEGLC 316
I P + Y +++ K R D E+ +++L + Q MI G Y +
Sbjct: 590 ASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNW 649
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++ K+ S G Y ++ AL+ G+ ++ ++L E RGL
Sbjct: 650 QIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 36/240 (15%)
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
P+ YTI+I+ L + ++D+ ++ DEM S+ + Y +LI+ + GR + +L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 218 VNEMHHRGTPPDVITYNPLLDVLCK-------------------------SHNV------ 246
++ M + P ++TYN +++ + ++N
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 247 -----DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
D+A + + + D GI PD+ TY+ L++ K+ RL+ ++ ++ G +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+Y V++ Y K G EA+ + +M+++G P+A TY +++ + G D +L EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 122/293 (41%), Gaps = 36/293 (12%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD+ Y II + K L DA + M A I P++ YT +I F ++A+
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
N M + + TF+ L+ + + G VKE++ + + ++ G+ N ++++ ++ Y
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ +A + M K PD ++ +++ ++VDE + +EM + I+
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSI 597
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEM---------------------------------- 221
+CY ++ K R D +L+ EM
Sbjct: 598 MCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLD 657
Query: 222 --HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+ G + YN LLD L ++A ++ E +G+ P++F L+
Sbjct: 658 KLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 248 KAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
+++ L K +Q Q KP+ YTI+I L + G L E+F ++ +G + +V +YT +
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG-EKLLREMVARG 365
IN Y + G + +L L+ +M++ P +TY +I A G + +G L EM G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 366 L 366
+
Sbjct: 243 I 243
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 40/367 (10%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+ D + +YS M I PN T+ L FC ++ L +M + + ++ T+N
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
LV + C+ G +KEA ++ +M ++ V P+ V+Y+SL+ G C V +A F+ MV RG
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
+ PD SY +I CK M+ ++ KLL EM ++ D +++G + GR+ A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 216 KLVNEMH-------------------HRGTP-------------------PDVITYNPLL 237
V E+ G P P+ TYN L+
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLI 454
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
+ L + +++A+ L ++++Q D TY LI LC++GR ++A+ + ++
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
++ GYCKE D+A L+S R+ D +Y +++A+ E G K
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALE 574
Query: 358 LREMVAR 364
L+E + R
Sbjct: 575 LQERMQR 581
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 36/344 (10%)
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
+ V + L+ G+ +G +++ + E++ V V T N L++ L K +++ V+
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
+VM + G+ PNT +++ L + +C + D M + G PD+ +Y +++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+ EA+ L M+ +++ D + Y SLI GLCK GR+ +A + + M RG PD ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N L+ CK + ++ L+ E+ + PD FT ++++G + GRL A ++
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 294 KGYNVTVQAYTVMINGYCKEG---------------------------------LCD--- 317
++ + +I C+EG CD
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
EAL L K+++ ++ DA TY +I L G N + E L+ EM
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 4/346 (1%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E LE + + +PD+V Y T++ S C+ + +A+ LY M +R+ P+ VTYTSLI
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G C G++++A + M+ + + + ++N L+ A CKEG ++++K + M+ V
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ + +++G+ + A + + + V + +I LC+ A L
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHL 433
Query: 183 LDE-MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
LD + E A YN+LI+ L + I +A L ++ ++ D TY L+ LC
Sbjct: 434 LDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLC 493
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
+ +A +L+ E+ D +KPD F L+ G CK A+ + ++ +
Sbjct: 494 RIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE 553
Query: 302 AYTVMINGYCKEGLC--DEALALISKMESSGRMPDAVTYEIIIRAL 345
+Y ++ C+ G C +AL L +M+ G +P+ +T + +I+ L
Sbjct: 554 SYNSLVKAVCETG-CGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 2/245 (0%)
Query: 107 KEAKNVFAVMMKQGVKPN--TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
KE +VF V++ + N V + L+ GY + V + +F ++ G S V +
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
++NGL K+ ++++ W++ M I +T +N L + C + + +M
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEE 265
Query: 225 GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
G PD++TYN L+ C+ + +A L K + + + PD+ TYT LI GLCK GR+++A
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ F ++ +G +Y +I YCKEG+ ++ L+ +M + +PD T ++I+
Sbjct: 326 HQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 345 LFEKG 349
+G
Sbjct: 386 FVREG 390
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 18/266 (6%)
Query: 120 GVKPNTVSYSSL-------------MDGYCLVKEVNKAK---DIFNLMVKRG--VSPDVQ 161
G +PN +Y L M C + E+ K D+F ++V + D
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+ +++ G K+ +V+E +++ E+ + N L++GL KL + D W++ + M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G P+ T+N L +V C N + +++++++G +PD+ TY L+ C+ GRL
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
K+A +++ + + + YT +I G CK+G EA +M G PD ++Y +
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 342 IRALFEKGENDKGEKLLREMVARGLL 367
I A ++G + +KLL EM+ ++
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVV 373
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 184/387 (47%), Gaps = 39/387 (10%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ-LQQAVGL 77
DV YTTI+ + + A DL+ M P VTY ++ F +G+ ++ +G+
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM----- 132
L+EM K + + T + ++ A +EG ++EAK FA + G +P TV+Y++L+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 133 -----DGYCLVKEVN-------------------------KAKDIFNLMVKRGVSPDVQS 162
+ ++KE+ +A + +M K+GV P+ +
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
YT +I+ K DEA KL M + +T YN+++ L K R ++ K++ +M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAI-ALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G P+ T+N +L LC + +DK + + +E++ G +PD T+ LI + G
Sbjct: 449 SNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
DA +++ ++ G+N V Y ++N ++G +IS M+S G P +Y ++
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 342 IRALFEKGENDKGEKLLREMVARGLLY 368
++ + KG N G + + + G ++
Sbjct: 568 LQC-YAKGGNYLGIERIENRIKEGQIF 593
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 184/425 (43%), Gaps = 72/425 (16%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ +R + +K D +T++ + ++ L+ +A + ++E+ + P VTY +L+ F
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G +A+ +L EM + T+N LV A + G KEA V +M K+GV PN ++
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK-------IKMV---- 176
Y++++D Y + ++A +F M + G P+ +Y +++ L K IKM+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 177 -------DEAW-----------------KLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
W ++ EM S D +N+LI + G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
DA K+ EM G V TYN LL+ L + + +I +++ +G KP +Y++++
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 273 DGLCKVG----------RLKDAQEIFQDILI--------------------------KGY 296
K G R+K+ Q IF ++ GY
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQ-IFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ + M++ + + + D+A ++ + G PD VTY ++ +GE K E+
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 357 LLREM 361
+L+ +
Sbjct: 688 ILKTL 692
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 162/347 (46%), Gaps = 37/347 (10%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYD-LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
P+ + T++ +LC +K + + ++ EM + P+ T+ +LI + G A
Sbjct: 454 PNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ EM + V T+N L++AL ++G+ + +NV + M +G KP SYS ++ Y
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 137 -------------LVKE----------------------VNKAKDIFNLMVKRGVSPDVQ 161
+KE + ++ F L K G PD+
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+ +++ + M D+A +L+ + + + D + YNSL+D + G A +++ +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
PD+++YN ++ C+ + +A+ ++ E+ ++GI+P +FTY + G +G
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+ +++ + + + ++++GYC+ G EA+ +SK+++
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 163/420 (38%), Gaps = 70/420 (16%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P V Y ++ K + ++A + EM P ++VTY L+ + G ++A G
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD--- 133
++ M K + T+ ++DA K G EA +F M + G PNT +Y++++
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 134 -------------------------------GYCLVKEVNK-AKDIFNLMVKRGVSPDVQ 161
C K ++K +F M G PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
++ +I+ + +A K+ EM A YN+L++ L + G ++++M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 222 HHRGTPPDVITYNPLLDVLCKSHN---VDKAIALIKEIQ--------------------- 257
+G P +Y+ +L K N +++ IKE Q
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 258 -----------DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
G KPD+ + ++ + A+ I + I G + + Y +
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
++ Y + G C +A ++ +E S PD V+Y +I+ +G + ++L EM RG+
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 46/318 (14%)
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKR----MDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
SL+ G G ++AV L ++L + ++ I V L +E A +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+ Q + +Y++++ Y + KA D+F M + G SP + +Y +I++ K+
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM-- 258
Query: 176 VDEAWK----LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+W+ +LDEM S+ + D ++++ + G + +A + E+ G P +
Sbjct: 259 -GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
TYN LL V K+ +A++++KE+++ D TY L+
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV------------------- 358
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
Y + G EA +I M G MP+A+TY +I A + G+
Sbjct: 359 ----------------AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 352 DKGEKLLREMVARGLLYN 369
D+ KL M G + N
Sbjct: 403 DEALKLFYSMKEAGCVPN 420
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE +R + PD+V Y +++D + A ++ + ++ P+ V+Y ++I GFC
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G +Q+AV +L+EM + + + T+N V G E ++V M K +PN ++
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Query: 128 YSSLMDGYCLVKEVNKAKDI 147
+ ++DGYC + ++A D
Sbjct: 774 FKMVVDGYCRAGKYSEAMDF 793
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 93/182 (51%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
A L ++ KPD+V++ +++ ++ + A + + + P+ VTY SL+ +
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
G+ +A +L + ++ ++ ++N ++ C+ G ++EA + + M ++G++P
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+Y++ + GY + + +D+ M K P+ ++ ++++G C+ EA + ++
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Query: 187 HS 188
+
Sbjct: 798 KT 799
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 179/353 (50%), Gaps = 2/353 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYTSLIYGFCIVGQLQQAV 75
+ D Y+++I L K + DA D +V R + + LI + G + +A+
Sbjct: 78 RHDYPSYSSLIYKLAKSRNF-DAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ +++ + + N L++ L G +++AK+ F ++PN+VS++ L+ G+
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ A +F+ M++ V P V +Y +I LC+ + +A LL++M ++I +
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ + L+ GLC G ++A KL+ +M +RG P ++ Y L+ L K +D+A L+ E
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGE 316
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ + IKPDV Y IL++ LC R+ +A + ++ +KG Y +MI+G+C+
Sbjct: 317 MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIED 376
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
D L +++ M +S P T+ ++ L + G D +L M + L +
Sbjct: 377 FDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 150/292 (51%), Gaps = 1/292 (0%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
T+I+ L + + A + R+ PN+V++ LI GF + A + +EM+
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ V T+N L+ LC+ ++ +AK++ M+K+ ++PN V++ LM G C E N+
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
AK + M RG P + +Y I+++ L K +DEA LL EM +I D + YN L++
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
LC R+ +A++++ EM +G P+ TY ++D C+ + D + ++ + P
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC-KEG 314
T+ ++ GL K G L A + + + K + A+ +++ C K+G
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V+P VV Y ++I LC++ + A L +M+ KRI PNAVT+ L+ G C G+ +A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+ +M + + + IL+ L K G + EAK + M K+ +KP+ V Y+ L++
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C V +A + M +G P+ +Y ++I+G C+I+ D +L+ M + +
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ ++ GL K G + A ++ M + + LL LC
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L ++++ +KPDVV+Y +++ LC + V +AY + +EM K PNA TY +I
Sbjct: 309 EAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
GFC + + +LN M+ R TF +V L K GN+ A V VM K+ +
Sbjct: 369 DGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLS 428
Query: 123 PNTVSYSSLMDGYCL 137
+ ++ +L+ C+
Sbjct: 429 FGSGAWQNLLSDLCI 443
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%)
Query: 107 KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTII 166
+EA ++F + G + + SYSSL+ + + I L+ R V + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 167 INGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
I K VD+A + ++ S + N+LI+ L G + A +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
P+ +++N L+ + + A + E+ + ++P V TY LI LC+ + A+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+ +D++ K + +++ G C +G +EA L+ ME G P V Y I++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 347 EKGENDKGEKLLREMVAR 364
++G D+ + LL EM R
Sbjct: 303 KRGRIDEAKLLLGEMKKR 320
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 107/228 (46%)
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+++ +A +F+ + G D SY+ +I L K + D ++L + +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+ LI K G + A + +++ + + N L++VL + ++KA + +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
D ++P+ ++ ILI G + A ++F ++L +V Y +I C+
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+A +L+ M P+AVT+ ++++ L KGE ++ +KL+ +M RG
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 3/287 (1%)
Query: 2 GETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AL +R + KPDV + +I+ C+ A DL+ EM K PN V++
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSF 266
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI GF G++++ V + EMI T ILVD LC+EG V +A + ++
Sbjct: 267 NTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLN 326
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+ V P+ Y SL++ C + +A ++ + K+G +P + T ++ GL K ++
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A +++M + I+ D++ +N L+ LC +DA +L +G PD TY+ L+
Sbjct: 387 ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVS 446
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQ 285
K + L+ E+ D+ + PD+FTY L+DGL G+ Q
Sbjct: 447 GFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 166/327 (50%), Gaps = 5/327 (1%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRI---PPNAVTYTSLIYGFCIVGQLQQAVGLL 78
++ + ID+ C+ + + Y L + KR+ PN Y +++ G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMD--YALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
M +R +V TFNIL++ C+ A ++F M ++G +PN VS+++L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ + + M++ G + I+++GLC+ VD+A L+ ++ +++++ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
SL++ LC + A +++ E+ +G P I L++ L KS +KA ++++ +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
GI PD T+ +L+ LC DA + KGY Y V+++G+ KEG E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 319 ALALISKMESSGRMPDAVTYEIIIRAL 345
L+++M +PD TY ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 162/351 (46%), Gaps = 14/351 (3%)
Query: 29 SLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT---------SLIYGFCIVGQLQQAVGLLN 79
SL D Y L S + A P ++ ++ S I +C ++ A+ +
Sbjct: 122 SLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFD 181
Query: 80 EMILKRM---DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
M KR+ V +N +V+ K G++ +A + M K+ KP+ +++ L++GYC
Sbjct: 182 TM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYC 239
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ + A D+F M ++G P+V S+ +I G ++E K+ EM
Sbjct: 240 RSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEA 299
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
L+DGLC+ GR+ DA LV ++ ++ P Y L++ LC + +A+ +++E+
Sbjct: 300 TCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEEL 359
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+G P T L++GL K GR + A + ++ G + +++ C
Sbjct: 360 WKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHS 419
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+A L S G PD TY +++ ++G +GE L+ EM+ + +L
Sbjct: 420 TDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML 470
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 233 YNPLLDVLCKSHNVDKAIA---LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
+ +D C++ +D A+ +K + D KP+V Y +++G K G + A +Q
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 290 DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
+ + V + ++INGYC+ D AL L +M+ G P+ V++ +IR G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 350 ENDKGEKLLREMVARGLLYN 369
+ ++G K+ EM+ G ++
Sbjct: 278 KIEEGVKMAYEMIELGCRFS 297
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 3/266 (1%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G +EA +F + + G++ NT S + L+D C K V +A+ + L +K ++P+ ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTF 227
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
I I+G CK V+EA + EM I Y ++I C+ +++++EM
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
G+PP+ ITY ++ L ++A+ + ++ G KPD Y LI L + GRL++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 284 AQEIFQ-DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM-PDAVTYEII 341
A+ +F+ ++ G ++ Y MI YC D+A+ L+ +MESS PD TY+ +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 342 IRALFEKGENDKGEKLLREMVARGLL 367
+R+ F++G+ + KLL+EMV + L
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
+ N + L+ C +++QA +L ++ + HTFNI + CK V+EA
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
M G +P +SY++++ YC E K ++ + M G P+ +YT I++ L
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN-EMHHRGTPPD 229
K +EA ++ M D++ YN LI L + GR+ +A ++ EM G +
Sbjct: 305 NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSIN 364
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGI-KPDVFTYTILIDGLCKVGRLKDAQEIF 288
TYN ++ + C DKAI L+KE++ + PDV TY L+ K G + + ++
Sbjct: 365 TSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLL 424
Query: 289 QDILIKGY-NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
++++ K + ++ YT +I C+ +C+ A L +M S P T +++ + +
Sbjct: 425 KEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKK 484
Query: 348 KGENDKGEKL 357
K ++ E++
Sbjct: 485 KNMHESAERI 494
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P+ + I CK V +A EM P ++YT++I +C + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L+EM T+ ++ +L + +EA V M + G KP+++ Y+ L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 136 CLVKEVNKAKDIFNL-MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII-A 193
+ +A+ +F + M + GVS + +Y +I C D+A +LL EM S +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEM---HHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
D Y L+ K G + + KL+ EM HH D TY L+ LC+++ + A
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL--DESTYTFLIQRLCRANMCEWAY 457
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
L +E+ Q I P T +L++ + K + A+ I
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 110/222 (49%), Gaps = 9/222 (4%)
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA-DTICYNSLIDGLCKLGRIS 212
+G +Y + ++ L K K D + ++ M +K++ +T+ ++ G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRFAGAGEWE 172
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+A + + + G + + N LLD LCK V++A ++ +++ I P+ T+ I I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFI 231
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
G CK R+++A Q++ G+ V +YT +I YC++ + ++S+ME++G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG-----LLYN 369
P+++TY I+ +L + E ++ ++ M G L YN
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 3/266 (1%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G +EA +F + + G++ NT S + L+D C K V +A+ + L +K ++P+ ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTF 227
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
I I+G CK V+EA + EM I Y ++I C+ +++++EM
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
G+PP+ ITY ++ L ++A+ + ++ G KPD Y LI L + GRL++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 284 AQEIFQ-DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM-PDAVTYEII 341
A+ +F+ ++ G ++ Y MI YC D+A+ L+ +MESS PD TY+ +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 342 IRALFEKGENDKGEKLLREMVARGLL 367
+R+ F++G+ + KLL+EMV + L
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
+ N + L+ C +++QA +L ++ + HTFNI + CK V+EA
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
M G +P +SY++++ YC E K ++ + M G P+ +YT I++ L
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN-EMHHRGTPPD 229
K +EA ++ M D++ YN LI L + GR+ +A ++ EM G +
Sbjct: 305 NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSIN 364
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGI-KPDVFTYTILIDGLCKVGRLKDAQEIF 288
TYN ++ + C DKAI L+KE++ + PDV TY L+ K G + + ++
Sbjct: 365 TSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLL 424
Query: 289 QDILIKGY-NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
++++ K + ++ YT +I C+ +C+ A L +M S P T +++ + +
Sbjct: 425 KEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKK 484
Query: 348 KGENDKGEKL 357
K ++ E++
Sbjct: 485 KNMHESAERI 494
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P+ + I CK V +A EM P ++YT++I +C + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L+EM T+ ++ +L + +EA V M + G KP+++ Y+ L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 136 CLVKEVNKAKDIFNL-MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII-A 193
+ +A+ +F + M + GVS + +Y +I C D+A +LL EM S +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEM---HHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
D Y L+ K G + + KL+ EM HH D TY L+ LC+++ + A
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL--DESTYTFLIQRLCRANMCEWAY 457
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
L +E+ Q I P T +L++ + K + A+ I
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 110/222 (49%), Gaps = 9/222 (4%)
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA-DTICYNSLIDGLCKLGRIS 212
+G +Y + ++ L K K D + ++ M +K++ +T+ ++ G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRFAGAGEWE 172
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+A + + + G + + N LLD LCK V++A ++ +++ I P+ T+ I I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFI 231
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
G CK R+++A Q++ G+ V +YT +I YC++ + ++S+ME++G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARG-----LLYN 369
P+++TY I+ +L + E ++ ++ M G L YN
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 167/353 (47%), Gaps = 8/353 (2%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG-L 77
DV +Y I L + DA+++Y M + P+ VT LI G+ + V +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+M K + F LV + C EG +EA + M K+G++ NT+ Y++LMD Y
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ + + +F M +G+ P +Y I+++ + D LL EM + +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 198 YNSLIDGLCKLGRISD-AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y LI + ++SD A M G P +Y L+ S +KA A +E+
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL---IKGYNVTVQAYTVMINGYCKE 313
+GIKP V TYT ++D + G EI++ +L IKG +T Y +++G+ K+
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT---YNTLLDGFAKQ 568
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
GL EA ++S+ G P +TY +++ A G++ K +LL+EM A L
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 2/332 (0%)
Query: 16 VKPDVVMYTTIIDSLCK-DKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
V PD V +I +L K + + ++++ +M K + + + L+ FC G ++A
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ + EM K + +N L+DA K +++E + +F M +G+KP+ +Y+ LMD
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK-MVDEAWKLLDEMHSEKIIA 193
Y + + + + M G+ P+V+SYT +I+ + K M D A M +
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKP 483
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ Y +LI G A+ EM G P V TY +LD +S + K + +
Sbjct: 484 SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIW 543
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
K + + IK TY L+DG K G +A+++ + G +V Y +++N Y +
Sbjct: 544 KLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
G + L+ +M + PD++TY +I A
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 8/353 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E + + VK ++ ++ S C + L +A + +EM K I N + Y +L+ +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+++ GL EM K + T+NIL+DA + + + M G++PN S
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 128 YSSLMDGYCLVKEVNK-AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
Y+ L+ Y K+++ A D F M K G+ P SYT +I+ ++A+ +EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 187 HSEKIIADTICYNSLIDGLCK---LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
E I Y S++D + G++ + WKL+ +GT ITYN LLD K
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT---RITYNTLLDGFAKQ 568
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
+A ++ E G++P V TY +L++ + G+ ++ +++ Y
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ MI + + A M SG++PD +YE +RA+ E K K
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE-KLRAILEDKAKTKNRK 680
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 9/296 (3%)
Query: 65 FCIVGQLQQA---VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
F ++G+ + A + LL+ + K +V +N + L +A V+ M K V
Sbjct: 245 FTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINV 304
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKD---IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
P+ V+ + L+ L K AK+ IF M ++GV + ++ C + +E
Sbjct: 305 YPDNVTCAILIT--TLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + EM + I ++TI YN+L+D K I + L EM +G P TYN L+D
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD-AQEIFQDILIKGYN 297
+ D L++E++D G++P+V +YT LI + ++ D A + F + G
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
+ +YT +I+ Y G ++A A +M G P TY ++ A G+ K
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
+++ L + +M D LL + ++ D YN+ I GL R DAW++ M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAI-ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
PD +T L+ L K+ K + + +++ ++G+K + L+ C G +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+A I ++ KG Y +++ Y K +E L ++M G P A TY I++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 343 RALFEKGENDKGEKLLREMVARGLLYN 369
A + + D E LLREM GL N
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPN 448
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 84/158 (53%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A+ E + ++ +KP V YT+++D+ + +++ M+ ++I +TY +L+ GF
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGF 565
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G +A +++E + V T+N+L++A + G + + M +KP++
Sbjct: 566 AKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDS 625
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
++YS+++ + V++ +A +MVK G PD +SY
Sbjct: 626 ITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+T +E+ + R+ +K + Y T++D K L +A D+ SE + P+ +TY
Sbjct: 534 GDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTY 593
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
L+ + GQ + LL EM + + T++ ++ A + + K A +M+K
Sbjct: 594 NMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVK 653
Query: 119 QGVKPNTVSYSSL 131
G P+ SY L
Sbjct: 654 SGQVPDPRSYEKL 666
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 4/294 (1%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R +P++ + ++D+LCK LV + L M R+ P+A T+ L +G+C V +
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+A+ LL EMI E T+ +D C+ G V EA ++F M+ +G + + +
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 133 DGYCLVKEVNKAKDIFNL---MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+ + +KA++ F L M+ G PDV +Y +I G+C + VDEA+K LDEM ++
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + YN + LC+ + +A KL M P V TYN L+ + + + D A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
E+ + DV TY +I+GL R K+A + ++++ KG + + +
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVF 519
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 4/281 (1%)
Query: 89 EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF 148
E++ FN+L+DALCK G VKE + + M+ VKP+ +++ L G+C V++ KA +
Sbjct: 233 EINAFNMLLDALCKCGLVKEGEALLR-RMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 149 NLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM--HSEKIIADTI-CYNSLIDGL 205
M++ G P+ +Y I+ C+ MVDEA L D M + A T + +I L
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K + + ++L+ M G PDV TY +++ +C + VD+A + E+ ++G PD+
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
TY + LC+ + +A +++ ++ +VQ Y ++I+ + + D A ++
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
M+ + D TY +I LF+ + LL E+V +GL
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 6/293 (2%)
Query: 10 LLRR--QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LLRR VKPD + + C+ + A L EM+ P TY + I FC
Sbjct: 256 LLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQ 315
Query: 68 VGQLQQAVGLLNEMILKRMDVEV---HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
G + +A L + MI K V TF +++ AL K +E + M+ G P+
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+Y +++G C+ ++V++A + M +G PD+ +Y + LC+ + DEA KL
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M + YN LI ++ A+ EM R DV TY +++ L H
Sbjct: 436 RMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH 495
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
+A L++E+ ++G+K + + L +VG LK ++ + + K YN
Sbjct: 496 RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKV-SEHMKKFYN 547
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 169/325 (52%), Gaps = 3/325 (0%)
Query: 40 YDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDA 99
+ +Y EM + N T+ +IY FC +L +A+ + M+ + V +FN+++D
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 100 LCKEGNVKEAKNVFAVM-MKQG--VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
CK G+++ A + M M G V PN V+Y+S+++G+C ++ A+ I MVK GV
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
+ ++Y +++ + DEA +L DEM S+ ++ +T+ YNS++ L G I A
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
++ +M+ + D T ++ LC++ V +A+ ++I ++ + D+ + L+
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
+ +L A +I +L++G ++ ++ +I+GY KEG + AL + M + + V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 337 TYEIIIRALFEKGENDKGEKLLREM 361
Y I+ L ++G E ++ M
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAM 527
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 12/369 (3%)
Query: 7 ALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM---VAKRIPPNAVTYTS 60
AL + R L V P+VV + +ID CK + A L +M + PNAVTY S
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I GFC G+L A + +M+ +D T+ LVDA + G+ EA + M +G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
+ NTV Y+S++ + ++ A + M + + D + I++ GLC+ V EA
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ ++ +K++ D +C+N+L+ + +++ A +++ M +G D I++ L+D
Sbjct: 417 EFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGY 476
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K +++A+ + + ++ Y +++GL K G A+ + + IK +
Sbjct: 477 LKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DI 532
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSG--RMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y ++N K G +EA ++SKM+ + VT+ I+I L + G +K +++L
Sbjct: 533 VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVL 592
Query: 359 REMVARGLL 367
+ MV RG++
Sbjct: 593 KFMVERGVV 601
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 177/351 (50%), Gaps = 11/351 (3%)
Query: 9 ELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
E +R +VK V Y ++D+ + +A L EM +K + N V Y S++Y
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ G ++ A+ +L +M K M ++ T I+V LC+ G VKEA + ++ + +
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
V +++LM + K++ A I M+ +G+S D S+ +I+G K ++ A ++ D
Sbjct: 431 IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYD 490
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M ++ + YNS+++GL K G A +VN M + D++TYN LL+ K+
Sbjct: 491 GMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTG 546
Query: 245 NVDKAIALIKEIQDQGIKPDV--FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
NV++A ++ ++Q Q + V T+ I+I+ LCK G + A+E+ + ++ +G
Sbjct: 547 NVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSIT 606
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
Y +I + K ++ + L + G P Y I+R L ++ EN +
Sbjct: 607 YGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR-ENGR 656
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 169/346 (48%), Gaps = 7/346 (2%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+V + +I S CK+ + +A ++ M+ + PN V++ +I G C G ++ A+ LL
Sbjct: 217 NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Query: 79 NEMILKRMDV---EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+M + + T+N +++ CK G + A+ + M+K GV N +Y +L+D Y
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAY 336
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
++A + + M +G+ + Y I+ L ++ A +L +M+S+ + D
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
++ GLC+ G + +A + ++ + D++ +N L+ + + A ++
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ QG+ D ++ LIDG K G+L+ A EI+ ++ + Y ++NG K G+
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
A A+++ ME + D VTY ++ + G ++ + +L +M
Sbjct: 517 AGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ SL+ G Q A ++ + + V VH N + L + V+ M
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
G N +++ ++ +C ++ +A +F M+K GV P+V S+ ++I+G CK +
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 178 EAWKLLDE---MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
A +LL + M + + + YNS+I+G CK GR+ A ++ +M G + TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
L+D ++ + D+A+ L E+ +G+ + Y ++ L G ++ A + +D+ K
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 295 GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
+ +++ G C+ G EA+ ++ + D V + ++ +
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 355 EKLLREMVARGL 366
+++L M+ +GL
Sbjct: 451 DQILGSMLVQGL 462
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 5/218 (2%)
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
G SPDV + ++ + A++++++ +E N+ + L + I
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
WK+ EM G +V T+N ++ CK + +A+++ + G+ P+V ++ ++IDG
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 275 LCKVGRLKDAQEIFQDI-LIKGYNVTVQA--YTVMINGYCKEGLCDEALALISKMESSGR 331
CK G ++ A ++ + ++ G V+ A Y +ING+CK G D A + M SG
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ TY ++ A G +D+ +L EM ++GL+ N
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 53/418 (12%)
Query: 2 GETSAALELLRRQLVKP--DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYT 59
G++ AL + L + D + T ++ S CK V A++L + + I N TY
Sbjct: 228 GKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC 287
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
LI+GF ++ +A L +M M+ ++ +++L+ LCK +++ A +++ + +
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 120 GVKPNT---------------------------------VSYSSLMDGYC---LVKEV-- 141
G+ P+ + Y SL +G+ LV E
Sbjct: 348 GIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYS 407
Query: 142 -------NKAKDIFNLMVK------RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
N D + +VK + + PD S +I+IN L K VD A LL ++
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+I + YN++I+G+CK GR ++ KL+ EM G P T N + L + +
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVG 527
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ L+K+++ G +P + T L+ LC+ GR DA + D+ +G+ + A T I+
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G K D L L + ++G PD + Y ++I+AL + + + L EMV++GL
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 159/350 (45%), Gaps = 4/350 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + +I+ L K V A L ++V + P + Y ++I G C G+ ++++ L
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L EM ++ T N + L + + A ++ M G +P + L+ C
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
A + + G + + T I+GL K + VD +L ++ + D I
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+ LI LCK R +A L NEM +G P V TYN ++D CK +D+ ++ I +
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM--INGYCKEGL 315
+ PDV TYT LI GLC GR +A IF+ +KG + T M I G CK G
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEA--IFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
EAL +ME PD+ Y ++ + + G + REMV +G
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 172/400 (43%), Gaps = 63/400 (15%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E +RR + D+ +Y +I LCK K + A LY E+ IPP+ L+ F
Sbjct: 306 FEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSE 365
Query: 68 VGQLQQAVGLLNEMILKRMDVE--VHTFNILVDALCKEGNVKEAKNVFAVMM-------- 117
+L + + E+I+ +D + + + L + + V EA + +M
Sbjct: 366 ESELSR----ITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV 421
Query: 118 ----------KQGVKPNTVSYSSLMDGYCLVK--EVNKAKDIFNLMVKRGVSPDVQSYTI 165
+ + P++ S S +++ CLVK +V+ A + + +V+ G+ P Y
Sbjct: 422 SEIVKLLKDHNKAILPDSDSLSIVIN--CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNN 479
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS------------------------- 200
II G+CK +E+ KLL EM + N
Sbjct: 480 IIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG 539
Query: 201 ----------LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
L+ LC+ GR DA K ++++ G ++ +D L K+ VD+ +
Sbjct: 540 FEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGL 599
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L ++I G PDV Y +LI LCK R +A +F +++ KG TV Y MI+G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
CKEG D L+ I +M + PD +TY +I L G
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 12/325 (3%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ---- 73
P +MY II+ +CK+ ++ L EM + P+ T CI G L +
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN------CIYGCLAERCDF 525
Query: 74 --AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSL 131
A+ LL +M + + LV LC+ G +A + +G + V+ ++
Sbjct: 526 VGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAA 585
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+DG + V++ ++F + G PDV +Y ++I LCK EA L +EM S+ +
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
YNS+IDG CK G I + M+ PDVITY L+ LC S +AI
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
E++ + P+ T+ LI GLCK G +A F+++ K Y +++ +
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFL 765
Query: 312 KEGLCDEALALISKMESSGRMPDAV 336
+ + +M GR P +V
Sbjct: 766 SSENINAGFGIFREMVHKGRFPVSV 790
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 184/427 (43%), Gaps = 71/427 (16%)
Query: 3 ETSAALELLRRQ-LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPP-------- 53
E S+ + +R L P+ Y +++++ K S E+V R+
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSS------VELVEARLKEMRDCGFHF 212
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
+ T T ++ +C G+ ++A+ + NE IL R ++ H ILV + CK G V +A +
Sbjct: 213 DKFTLTPVLQVYCNTGKSERALSVFNE-ILSRGWLDEHISTILVVSFCKWGQVDKAFELI 271
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
++ ++ ++ N +Y L+ G+ ++KA +F M + G++ D+ Y ++I GLCK
Sbjct: 272 EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 174 KMVDEAWKLLDEMH---------------------------SEKIIAD------TICYNS 200
K ++ A L E+ +E II D + Y S
Sbjct: 332 KDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKS 391
Query: 201 LIDGLCKLGRISDAWKLVNEM------------------HHRGTPPDVITYNPLLDVLCK 242
L +G + + +A+ + + H++ PD + + +++ L K
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
++ VD A+ L+ +I G+ P Y +I+G+CK GR +++ ++ + +K V
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE--MKDAGVEPSQ 509
Query: 303 YTVMINGYCKEGLCD--EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+T+ C CD AL L+ KM G P +++ L E G K L +
Sbjct: 510 FTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD 569
Query: 361 MVARGLL 367
+ G L
Sbjct: 570 VAGEGFL 576
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 6 AALELLRRQLV---KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
AL+LL++ +P + T ++ LC++ DA ++ + + V T+ I
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G + + + L ++ +V +++L+ ALCK EA +F M+ +G+K
Sbjct: 587 DGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLK 646
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P +Y+S++DG+C E+++ M + +PDV +YT +I+GLC EA
Sbjct: 647 PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR 706
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+EM + + I + +LI GLCK G +A EM + PD Y L+
Sbjct: 707 WNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLS 766
Query: 243 SHNVDKAIALIKEIQDQGIKP 263
S N++ + +E+ +G P
Sbjct: 767 SENINAGFGIFREMVHKGRFP 787
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
+V T ID L K++ V +L+ ++ A P+ + Y LI C + +A L N
Sbjct: 579 MVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFN 638
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
EM+ K + V T+N ++D CKEG + + M + P+ ++Y+SL+ G C
Sbjct: 639 EMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
++A +N M + P+ ++ +I GLCK EA EM +++ D+ Y
Sbjct: 699 RPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYL 758
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
SL+ I+ + + EM H+G P + N +L V S V+
Sbjct: 759 SLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PDV+ YT++I LC S+A ++EM K PN +T+ +LI G C G +A+
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
EM K M+ + + LV + N+ +F M+ +G P +V + ++
Sbjct: 742 FREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 168/346 (48%), Gaps = 4/346 (1%)
Query: 26 IIDSLCKD----KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+ DSL K K +A D + +M P + + + G++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
++ +T N+++ C+ G + + + M + G + VSY++L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+ A + N+M K G+ P+V ++ +I+G C+ + EA K+ EM + + +T+ YN+L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
I+G + G A++ +M G D++TYN L+ LCK KA +KE+ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P+ T++ LI G C E+++ ++ G + Q + ++++ +C+ D A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++ +M D+ T + L +G++ +KLL+EM + L
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + SL V A Y EM +I PN T ++ G+C G+L + + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M ++N L+ C++G + A + +M K G++PN V++++L+ G+C
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ +A +F M V+P+ +Y +ING + + A++ ++M I D +
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN+LI GLCK + A + V E+ P+ T++ L+ C N D+ L K +
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
G P+ T+ +L+ C+ A ++ ++++ + + + + NG +G
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 318 EALALISKME 327
L+ +ME
Sbjct: 501 LVKKLLQEME 510
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+RR + P+ ++ C+ + +L +M V+Y +LI G C G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L A+ L N M + V TFN L+ C+ ++EA VF M V PNTV+Y++
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++GY + A + MV G+ D+ +Y +I GLCK +A + + E+ E
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
++ ++ +++LI G C ++L M G P+ T+N L+ C++ + D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+++E+ + I D T + +GL G+ + +++ Q++ K +
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
D F+ L + A + F M G P S ++ M V+ A
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+ M + +SP+ + ++++G C+ +D+ +LL +M A + YN+LI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
+ G +S A KL N M G P+V+T+N L+ C++ + +A + E++ + P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
TY LI+G + G + A ++D++ G + Y +I G CK+ +A + ++
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ +P++ T+ +I + D+G +L + M+ G
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 4/244 (1%)
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ SL + +K+ A D F M G P V+S ++ L VD A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
KI + N ++ G C+ G++ +L+ +M G ++YN L+ C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA--YTV 305
A+ L + G++P+V T+ LI G C+ +L++A ++F ++ K NV Y
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYNT 348
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+INGY ++G + A M +G D +TY +I L ++ + K + ++E+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 366 LLYN 369
L+ N
Sbjct: 409 LVPN 412
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 38/258 (14%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ +ELL+ R + V Y T+I C+ L+S A L + M + PN VT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 59 TSLIYGFCIVGQLQQAVGLLNE-----------------------------------MIL 83
+LI+GFC +LQ+A + E M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ ++ T+N L+ LCK+ ++A + K+ + PN+ ++S+L+ G C+ K ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
+++ M++ G P+ Q++ ++++ C+ + D A ++L EM I D+ + + +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 204 GLCKLGRISDAWKLVNEM 221
GL G+ KL+ EM
Sbjct: 492 GLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 168/346 (48%), Gaps = 4/346 (1%)
Query: 26 IIDSLCKD----KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+ DSL K K +A D + +M P + + + G++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
++ +T N+++ C+ G + + + M + G + VSY++L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+ A + N+M K G+ P+V ++ +I+G C+ + EA K+ EM + + +T+ YN+L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
I+G + G A++ +M G D++TYN L+ LCK KA +KE+ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P+ T++ LI G C E+++ ++ G + Q + ++++ +C+ D A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
++ +M D+ T + L +G++ +KLL+EM + L
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V + SL V A Y EM +I PN T ++ G+C G+L + + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M ++N L+ C++G + A + +M K G++PN V++++L+ G+C
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ +A +F M V+P+ +Y +ING + + A++ ++M I D +
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
YN+LI GLCK + A + V E+ P+ T++ L+ C N D+ L K +
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
G P+ T+ +L+ C+ A ++ ++++ + + + + NG +G
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 318 EALALISKME 327
L+ +ME
Sbjct: 501 LVKKLLQEME 510
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+RR + P+ ++ C+ + +L +M V+Y +LI G C G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L A+ L N M + V TFN L+ C+ ++EA VF M V PNTV+Y++
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L++GY + A + MV G+ D+ +Y +I GLCK +A + + E+ E
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
++ ++ +++LI G C ++L M G P+ T+N L+ C++ + D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+++E+ + I D T + +GL G+ + +++ Q++ K +
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
D F+ L + A + F M G P S ++ M V+ A
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+ M + +SP+ + ++++G C+ +D+ +LL +M A + YN+LI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
+ G +S A KL N M G P+V+T+N L+ C++ + +A + E++ + P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
TY LI+G + G + A ++D++ G + Y +I G CK+ +A + ++
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ +P++ T+ +I + D+G +L + M+ G
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 4/244 (1%)
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ SL + +K+ A D F M G P V+S ++ L VD A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
KI + N ++ G C+ G++ +L+ +M G ++YN L+ C+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA--YTV 305
A+ L + G++P+V T+ LI G C+ +L++A ++F ++ K NV Y
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYNT 348
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+INGY ++G + A M +G D +TY +I L ++ + K + ++E+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 366 LLYN 369
L+ N
Sbjct: 409 LVPN 412
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 38/258 (14%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ +ELL+ R + V Y T+I C+ L+S A L + M + PN VT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 59 TSLIYGFCIVGQLQQAVGLLNE-----------------------------------MIL 83
+LI+GFC +LQ+A + E M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+ ++ T+N L+ LCK+ ++A + K+ + PN+ ++S+L+ G C+ K ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
+++ M++ G P+ Q++ ++++ C+ + D A ++L EM I D+ + + +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 204 GLCKLGRISDAWKLVNEM 221
GL G+ KL+ EM
Sbjct: 492 GLKHQGKDQLVKKLLQEM 509
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 165/336 (49%), Gaps = 4/336 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
EL+++ K V ++DSL + KL +A L+ ++ +R PN +TYT L+ G+C
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCR 310
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V L +A + N+MI + + ++ N++++ L + +A +F VM +G PN S
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ +C + A + F+ MV G+ PD YT +I G K +D ++LL EM
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D YN+LI + A ++ N+M P + T+N ++ + N +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A+ +E+ +GI PD +YT+LI GL G+ ++A +++L KG + Y
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
+ + G + L + + SG+ A EI R
Sbjct: 551 ADFHRGGQPEIFEELAQRAKFSGKFAAA---EIFAR 583
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 169/354 (47%), Gaps = 2/354 (0%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
RQ D Y +++ L K + + EM K + T+T + F + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+AVG+ M + + V T N L+D+L + KEA+ +F +K+ PN ++Y+ L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKERFTPNMMTYTVLL 305
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
+G+C V+ + +A I+N M+ +G+ PD+ ++ +++ GL + + +A KL M S+
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+ Y +I CK + A + ++M G PD Y L+ +D L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+KE+Q++G PD TY LI + + A I+ ++ ++ + +++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ A+ +M G PD +Y ++IR L +G++ + + L EM+ +G+
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 2/340 (0%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
AA L KP+ + + L ++ LV +A ++Y+ + I + VT S++ G
Sbjct: 131 AAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGC 190
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
+L + L EM+ D E L+ ALC G+V E + +KQG+ P
Sbjct: 191 LKARKLDRFWELHKEMVESEFDSE--RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQ 248
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
Y+ L+ G+C + ++ + M+ P + Y II GLC K EA+ +
Sbjct: 249 YVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKN 308
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
+ + D + Y ++I G C+ G + A KL EM +G P+ YN ++ K
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ A E+ G + + +I G C G+ +A EIF+++ G Y
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+I G+CKE ++ L L ++++ G P + Y ++R L
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 37/305 (12%)
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
V L +EG V+EA V+ V+ G+ + V+ +S++ G +++++ ++ MV+
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
D + +I LC V E ++LL + + + Y LI G C++G + +
Sbjct: 212 --DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
+++ M P + Y ++ LC + +A + K ++D+G PD YT +I G C
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN---------------------------- 308
+ G L A++++ +++ KG AY VMI+
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 309 -------GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
G+C G DEA + M +G P+A+TY +I+ ++ + +KG KL +E+
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 362 VARGL 366
A GL
Sbjct: 450 KALGL 454
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ S ELL+ +Q + P +Y +I C+ + ++ M+A P+ Y
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+I G C+ + +A + + K + + ++ C++G + A+ ++ M+K
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G++PN +Y+ ++ G+ E++ + +N M++ G + S +I G C DE
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A+++ M + + I YN+LI G CK ++ KL E+ G P + Y L+
Sbjct: 407 AFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Query: 239 VLCKSHNVDKAIAL 252
L S +V ++ L
Sbjct: 467 NLKMSDSVATSLNL 480
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 171/347 (49%), Gaps = 3/347 (0%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V Y +I+S K + +DL + M K++ N T+ ++ + ++ +A+ N
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
M + + FN L+ ALCK NV++A+ VF M+ P++ +YS L++G+
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-NMRDRFTPDSKTYSILLEGWGKEP 251
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ KA+++F M+ G PD+ +Y+I+++ LCK VDEA ++ M T Y+
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
L+ R+ +A EM G DV +N L+ CK++ + ++KE++ +
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G+ P+ + I++ L + G +A ++F+ +IK YT++I +C++ + A
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRK-MIKVCEPDADTYTMVIKMFCEKKEMETA 430
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ M G P T+ ++I L E+ K LL EM+ G+
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E A ++ + + P++V + ++ +LCK K V A +++ M R P++ TY+ L+
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILL 244
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G+ L +A + EMI ++ T++I+VD LCK G V EA + M K
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P T YS L+ Y + +A D F M + G+ DV + +I CK + +++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
L EM S+ + ++ N ++ L + G +A+ + +M + PD TY ++ + C+
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCE 423
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++ A + K ++ +G+ P + T+++LI+GLC+ + A + ++++ G
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 476
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+Y +++ +++ D+ N M K+ + +V+++ I++ + + VDEA + M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ + + +N L+ LCK + A ++ M R TP D TY+ LL+ K N+
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSILLEGWGKEPNL 253
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
KA + +E+ D G PD+ TY+I++D LCK GR+ +A I + + T Y+V+
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
++ Y E +EA+ +ME SG D + +I A + ++L+EM ++G+
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 367 LYN 369
N
Sbjct: 374 TPN 376
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII-ADTICYNSLIDGLCKLGRI 211
+R V++Y ++I KI+ W L++ M +K++ +T C ++ + ++
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCI--VMRKYARAQKV 184
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
+A N M PP+++ +N LL LCKS NV KA + + ++D+ PD TY+IL
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
++G K L A+E+F++++ G + + Y++M++ CK G DEAL ++ M+ S
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 332 MPDAVTYEIII 342
P Y +++
Sbjct: 304 KPTTFIYSVLV 314
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 9/364 (2%)
Query: 12 RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL 71
R L++ D + +I L + ++ A + +M K +P + + LI + G +
Sbjct: 142 RSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIV 201
Query: 72 QQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSL 131
Q++V + +M ++ + ++N L + + G AK F M+ +GV+P +Y+ +
Sbjct: 202 QESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+ G+ L + A F M RG+SPD ++ +ING C+ K +DEA KL EM KI
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+ Y ++I G + R+ D ++ EM G P+ TY+ LL LC + + +A
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 252 LIKEIQDQGIKP-DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
++K + + I P D + L+ K G + A E+ + + Y V+I
Sbjct: 382 ILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQ 441
Query: 311 CKEGLCDEALALISKM---ESSGRMPDAV-----TYEIIIRALFEKGENDKGEKLLREMV 362
CK + A+ L+ + E R D + Y II L G+ K E L R+++
Sbjct: 442 CKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 363 ARGL 366
RG+
Sbjct: 502 KRGV 505
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 45/351 (12%)
Query: 43 YSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCK 102
+++MV++ + P TY +++GF + +L+ A+ +M + + + TFN +++ C+
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 103 EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
+ EA+ +F M + P+ VSY++++ GY V V+ IF M G+ P+ +
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKII------------------------------ 192
Y+ ++ GLC + EA +L M ++ I
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAM 422
Query: 193 ------ADTICYNSLIDGLCKLGRISDAWKLVNEM--------HHRGTPPDVITYNPLLD 238
A+ Y LI+ CK + A KL++ + H + YNP+++
Sbjct: 423 ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIE 482
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
LC + KA L +++ +G++ D LI G K G + EI + + +G
Sbjct: 483 YLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPR 541
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
AY ++I Y +G +A + M G +PD+ + +I +LFE G
Sbjct: 542 ESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 17/355 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P VV YTT+I V D ++ EM + I PNA TY++L+ G C G++ +A
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 76 GLLNEMILKRMDVEVHT-FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+L M+ K + + ++ F L+ + K G++ A V M V Y L++
Sbjct: 381 NILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIEN 440
Query: 135 YCLVKEVNKAKDIFNLMVKRGV--------SPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
C N+A + + ++++ + + +Y II LC +A L ++
Sbjct: 441 QCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL 500
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL-DVLCKSHN 245
++ + D N+LI G K G +++++ M RG P + Y L+ + K
Sbjct: 501 M-KRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEP 559
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK--GYNVTVQAY 303
D AL ++D G PD + +I+ L + GR++ A + ++ K G +
Sbjct: 560 GDAKTALDSMVED-GHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLI 618
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
++ G +EAL I + +G D + ++ L EKG+ KLL
Sbjct: 619 AKILEALLMRGHVEEALGRIDLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLL 670
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 55 AVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFA 114
A Y L+ F G+ + L++EMI TFN+L+ C G A++V
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVE 208
Query: 115 VMMKQ---GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
+K +P SY++++ VK+ ++ M++ G +PDV +Y I++
Sbjct: 209 QFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
++ D ++LLDEM + D YN L+ L + A L+N M G P VI
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVI 328
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
+ L+D L ++ ++ + E G PDV YT++I G G L+ A+E+F+++
Sbjct: 329 HFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
KG V Y MI G+C G EA AL+ +MES G P+ V Y ++ L G+
Sbjct: 389 TEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 352 DKGEKLLREMVARG 365
+ +++++MV +G
Sbjct: 449 LEAHEVVKDMVEKG 462
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P +Y ++++ V Q + + +M+ +V T+NI++ A + G +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
M+K G P+ +Y+ L+ + A ++ N M + GV P V +T +I+GL +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 173 IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
++ +DE D +CY +I G G + A ++ EM +G P+V T
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 233 YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
YN ++ C + +A AL+KE++ +G P+ Y+ L++ L G++ +A E+ +D++
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 293 IKGYNV 298
KG+ V
Sbjct: 460 EKGHYV 465
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 6 AALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
AAL LL R V+P V+ +TT+ID L + + E V P+ V YT +I
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G+ G+L++A + EM K V T+N ++ C G KEA + M +G
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
PN V YS+L++ +V +A ++ MV++G
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 1 MGETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+T LL + PD+ Y ++ L A +L + M + P +
Sbjct: 270 LGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIH 329
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+T+LI G G+L+ ++E + +V + +++ G +++A+ +F M
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
++G PN +Y+S++ G+C+ + +A + M RG +P+ Y+ ++N L V
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Query: 178 EAWKLLDEM 186
EA +++ +M
Sbjct: 450 EAHEVVKDM 458
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 4/336 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
EL+++ K V ++DSL + KL +A L+ ++ +R PN +TYT L+ G+C
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCR 310
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V L +A + N+MI + ++ N++++ L + +A +F VM +G PN S
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ +C + A + F+ MV G+ PD YT +I G K +D ++LL EM
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D YN+LI + ++ N+M P + T+N ++ + N +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A+ E+ +GI PD +YT+LI GL G+ ++A +++L KG + Y
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
+ + G + L + + SG+ A EI R
Sbjct: 551 ADFHRGGQPEIFEELAQRAKFSGKFAAA---EIFAR 583
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 163/344 (47%), Gaps = 2/344 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +++ L K + + EM K + T+T + F + ++AVG+ M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+ + V T N L+D+L + KEA+ +F +K+ PN ++Y+ L++G+C V+ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+A I+N M+ G+ PD+ ++ +++ GL + +A KL M S+ + Y +I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
CK + A + ++M G PD Y L+ +D L+KE+Q++G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
PD TY LI + + I+ ++ ++ + +++ Y + A+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+M G PD +Y ++IR L +G++ + + L EM+ +G+
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 4/336 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
EL+++ K V ++DSL + KL +A L+ ++ +R PN +TYT L+ G+C
Sbjct: 251 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCR 309
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
V L +A + N+MI + ++ N++++ L + +A +F VM +G PN S
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++ +C + A + F+ MV G+ PD YT +I G K +D ++LL EM
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D YN+LI + ++ N+M P + T+N ++ + N +
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
A+ E+ +GI PD +YT+LI GL G+ ++A +++L KG + Y
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
+ + G + L + + SG+ A EI R
Sbjct: 550 ADFHRGGQPEIFEELAQRAKFSGKFAAA---EIFAR 582
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 2/354 (0%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
RQ D Y +++ L K + + EM K + T+T + F + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+AVG+ M + + V T N L+D+L + KEA+ +F +K+ PN ++Y+ L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKERFTPNMMTYTVLL 304
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
+G+C V+ + +A I+N M+ G+ PD+ ++ +++ GL + +A KL M S+
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+ Y +I CK + A + ++M G PD Y L+ +D L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+KE+Q++G PD TY LI + + I+ ++ ++ + +++ Y
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ A+ +M G PD +Y ++IR L +G++ + + L EM+ +G+
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAV------MMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
HT+ +V GN+ AK A+ M++ G +PNTV+Y+ L+ Y +N+A
Sbjct: 365 HTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
++FN M + G PD +Y +I+ K +D A + M + + DT Y+ +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
L K G + A KL EM +G P+++TYN ++D+ K+ N A+ L +++Q+ G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
TY+I+++ L G L++A+ +F ++ K + Y ++++ + K G ++A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
M +G P+ T ++ + + +LL+ M+A GL
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 1/282 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G + L+ + R +P+ V Y +I S + +++A +++++M P+ VTY +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G L A+ + M + + T++++++ L K G++ A +F M+ QG
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+Y+ +MD + + A ++ M G PD +Y+I++ L ++EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ EM + I D Y L+D K G + AW+ M H G P+V T N LL
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ + + +A L++ + G++P + TYT+L+ C GR K
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 2/342 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
L R+ K D YTT++ +L + K L EMV PN VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
L +A+ + N+M + T+ L+D K G + A +++ M G+ P+T +YS
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ + A +F MV +G +P++ +Y I+++ K + A KL +M +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + Y+ +++ L G + +A + EM + PD Y L+D+ K+ NV+KA
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ + G++P+V T L+ +V ++ +A E+ Q++L G ++Q YT++++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS- 652
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
C +G + ++ +S P A + + + A GEN
Sbjct: 653 CCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPAAGPDGEN 693
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
Query: 148 FNLMVKR--GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
F +KR G D +YT ++ L + K KLLDEM + +T+ YN LI
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
+ +++A + N+M G PD +TY L+D+ K+ +D A+ + + +Q G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
FTY+++I+ L K G L A ++F +++ +G + Y +M++ + K AL L
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M+++G PD VTY I++ L G ++ E + EM
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 21/331 (6%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAV---------GLLNEMILKRMDVEVHTF--NILVDALC 101
P+ TS Y C G + + V G E L+ + + + + N ++ +
Sbjct: 285 PSGTALTSRQY--CNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMN 342
Query: 102 KEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
GN A F + +Q G K + +Y++++ K+ + + MV+ G P+
Sbjct: 343 DYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+Y +I+ + ++EA + ++M D + Y +LID K G + A +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M G PD TY+ +++ L K+ ++ A L E+ DQG P++ TY I++D K
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMIN--GYCKEGLCDEALALISKMESSGRMPDAVTY 338
++A ++++D+ G+ Y++++ G+C G +EA A+ ++M+ +PD Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+++ + G +K + + M+ GL N
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAV------MMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
HT+ +V GN+ AK A+ M++ G +PNTV+Y+ L+ Y +N+A
Sbjct: 365 HTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
++FN M + G PD +Y +I+ K +D A + M + + DT Y+ +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
L K G + A KL EM +G P+++TYN ++D+ K+ N A+ L +++Q+ G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
TY+I+++ L G L++A+ +F ++ K + Y ++++ + K G ++A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
M +G P+ T ++ + + +LL+ M+A GL
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 1/282 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G + L+ + R +P+ V Y +I S + +++A +++++M P+ VTY +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G L A+ + M + + T++++++ L K G++ A +F M+ QG
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+Y+ +MD + + A ++ M G PD +Y+I++ L ++EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ EM + I D Y L+D K G + AW+ M H G P+V T N LL
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ + + +A L++ + G++P + TYT+L+ C GR K
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 2/342 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
L R+ K D YTT++ +L + K L EMV PN VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
L +A+ + N+M + T+ L+D K G + A +++ M G+ P+T +YS
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ + A +F MV +G +P++ +Y I+++ K + A KL +M +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + Y+ +++ L G + +A + EM + PD Y L+D+ K+ NV+KA
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ + G++P+V T L+ +V ++ +A E+ Q++L G ++Q YT++++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS- 652
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
C +G + ++ +S P A + + + A GEN
Sbjct: 653 CCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPAAGPDGEN 693
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
Query: 148 FNLMVKR--GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
F +KR G D +YT ++ L + K KLLDEM + +T+ YN LI
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
+ +++A + N+M G PD +TY L+D+ K+ +D A+ + + +Q G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
FTY+++I+ L K G L A ++F +++ +G + Y +M++ + K AL L
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M+++G PD VTY I++ L G ++ E + EM
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 21/331 (6%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAV---------GLLNEMILKRMDVEVHTF--NILVDALC 101
P+ TS Y C G + + V G E L+ + + + + N ++ +
Sbjct: 285 PSGTALTSRQY--CNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMN 342
Query: 102 KEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
GN A F + +Q G K + +Y++++ K+ + + MV+ G P+
Sbjct: 343 DYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+Y +I+ + ++EA + ++M D + Y +LID K G + A +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M G PD TY+ +++ L K+ ++ A L E+ DQG P++ TY I++D K
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMIN--GYCKEGLCDEALALISKMESSGRMPDAVTY 338
++A ++++D+ G+ Y++++ G+C G +EA A+ ++M+ +PD Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+++ + G +K + + M+ GL N
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAV------MMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
HT+ +V GN+ AK A+ M++ G +PNTV+Y+ L+ Y +N+A
Sbjct: 365 HTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
++FN M + G PD +Y +I+ K +D A + M + + DT Y+ +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
L K G + A KL EM +G P+++TYN ++D+ K+ N A+ L +++Q+ G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
TY+I+++ L G L++A+ +F ++ K + Y ++++ + K G ++A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
M +G P+ T ++ + + +LL+ M+A GL
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 1/282 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
G + L+ + R +P+ V Y +I S + +++A +++++M P+ VTY +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G L A+ + M + + T++++++ L K G++ A +F M+ QG
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+Y+ +MD + + A ++ M G PD +Y+I++ L ++EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ EM + I D Y L+D K G + AW+ M H G P+V T N LL
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ + + +A L++ + G++P + TYT+L+ C GR K
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 2/342 (0%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
L R+ K D YTT++ +L + K L EMV PN VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
L +A+ + N+M + T+ L+D K G + A +++ M G+ P+T +YS
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ + A +F MV +G +P++ +Y I+++ K + A KL +M +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + Y+ +++ L G + +A + EM + PD Y L+D+ K+ NV+KA
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ + G++P+V T L+ +V ++ +A E+ Q++L G ++Q YT++++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS- 652
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
C +G + ++ +S P A + + + A GEN
Sbjct: 653 CCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPAAGPDGEN 693
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
Query: 148 FNLMVKR--GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
F +KR G D +YT ++ L + K KLLDEM + +T+ YN LI
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
+ +++A + N+M G PD +TY L+D+ K+ +D A+ + + +Q G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
FTY+++I+ L K G L A ++F +++ +G + Y +M++ + K AL L
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M+++G PD VTY I++ L G ++ E + EM
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 21/331 (6%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAV---------GLLNEMILKRMDVEVHTF--NILVDALC 101
P+ TS Y C G + + V G E L+ + + + + N ++ +
Sbjct: 285 PSGTALTSRQY--CNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMN 342
Query: 102 KEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
GN A F + +Q G K + +Y++++ K+ + + MV+ G P+
Sbjct: 343 DYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+Y +I+ + ++EA + ++M D + Y +LID K G + A +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M G PD TY+ +++ L K+ ++ A L E+ DQG P++ TY I++D K
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMIN--GYCKEGLCDEALALISKMESSGRMPDAVTY 338
++A ++++D+ G+ Y++++ G+C G +EA A+ ++M+ +PD Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 339 EIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+++ + G +K + + M+ GL N
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 183/417 (43%), Gaps = 67/417 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D VMYT ++ CKD ++ A LY MV + + + +LI+GF +G L + +
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF------------------------- 113
++MI K + V T++I++ + CKEGNV A +F
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 114 ------AV-----MMKQGVKPNTVSY--------------------SSLMDGYCLVK--- 139
AV M+ G+ P+ ++Y S++D C +
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV 450
Query: 140 -------EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
EV K + + + ++ + ++ LC + A +++M +
Sbjct: 451 IDDLGNIEV-KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCT 509
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
YNS+I L + I D LVN + PDV TY +++ LCK ++ D A A+
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
I +++ G++P V Y+ +I L K GR+ +A+E F +L G AY +MIN Y +
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G DEA L+ ++ P + TY ++I + G +KG + L +M+ GL N
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 33/376 (8%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI----------YGF 65
+ +V YT +I K + A DL M+ I P+ +TY L+ Y
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 66 CIV------------------GQLQQAV-GLLNEMILKRMDVEVHTFNILVDALCKEGNV 106
I+ G ++ V LL E+ K ++ ++ ALC + N
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNY 493
Query: 107 KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE--VNKAKDIFNLMVKRGVSPDVQSYT 164
A + M+ G P SY+S++ CL +E + + N++ + PDV +Y
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIK--CLFQENIIEDLASLVNIIQELDFVPDVDTYL 551
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
I++N LCK D A+ ++D M + Y+S+I L K GR+ +A + +M
Sbjct: 552 IVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES 611
Query: 225 GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
G PD I Y +++ ++ +D+A L++E+ ++P FTYT+LI G K+G ++
Sbjct: 612 GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ +L G + V YT +I + K+G + L M + D + Y ++
Sbjct: 672 CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG 731
Query: 345 LFEKGENDKGEKLLRE 360
L+ K +++ E
Sbjct: 732 LWRAMARKKKRQVIVE 747
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++P V +Y++II SL K V +A + +++M+ I P+ + Y +I + G++ +A
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+ E++ + T+ +L+ K G +++ M++ G+ PN V Y++L+ +
Sbjct: 638 ELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK----- 190
+ + +F LM + + D +Y +++GL + + +++ E EK
Sbjct: 698 LKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL 757
Query: 191 --------------------------------IIADTICYNSLIDGLCKLGRISDAWKLV 218
II + +N++I G C GR+ +A+ +
Sbjct: 758 IRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHL 817
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
M G P+++TY L+ ++ +++ AI L + +PD Y+ L+ GLC
Sbjct: 818 ESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDF 874
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
R DA + ++ G N +Y ++ C L EA+ ++ M + P ++ +
Sbjct: 875 KRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINH 934
Query: 339 EIIIRALFEKGENDKGEKLLREMVARG 365
+I L E+ + + L MV G
Sbjct: 935 TWLIYILCEEKKLREARALFAIMVQSG 961
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 40/353 (11%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD + Y +I++ ++ + +A +L E+V + P++ TYT LI GF +G +++
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGC 672
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L++M+ + V + L+ K+G+ K + +F +M + +K + ++Y +L+ G
Sbjct: 673 QYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Query: 136 C----------LVKEVNKAKDIFNLM---------------------------VKRGVSP 158
++ E K K + L+ VK+ + P
Sbjct: 733 WRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP 792
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
++ + II G C +DEA+ L+ M E I+ + + Y L+ + G I A L
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
+ PD + Y+ LL LC A+AL+ E+Q GI P+ +Y L+ LC
Sbjct: 853 EGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
+A ++ +D+ +T +I C+E EA AL + M SGR
Sbjct: 910 RLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 6/366 (1%)
Query: 5 SAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
S ++L RR L+ + +ID +S+A + V I ++ Y +LI
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRVIDG---SSSISEAALVADFAVDNGIELDSSCYGALIRK 104
Query: 65 FCIVGQLQQAVGLLNEMILKRMDV-EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
+GQ A N+ ++ V + + +V L K EA+ ++ G P
Sbjct: 105 LTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAP 164
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ S S ++D C +A F + +RG + + GLC ++EA +L
Sbjct: 165 SRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGML 224
Query: 184 DEMHS-EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
D + ++ Y SL CK G ++A L + M G D + Y L+ CK
Sbjct: 225 DTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCK 284
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+N+ A+ L + ++ + D + LI G K+G L + +F ++ KG V
Sbjct: 285 DNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFT 344
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAV-TYEIIIRALFEKGENDKGEKLLREM 361
Y +MI YCKEG D AL L S + V Y +I ++KG DK LL M
Sbjct: 345 YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Query: 362 VARGLL 367
+ G++
Sbjct: 405 LDNGIV 410
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 2/267 (0%)
Query: 105 NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN-LMVKRGVSPDVQSY 163
++ EA V + G++ ++ Y +L+ + + A+ +N ++ G+ PD
Sbjct: 75 SISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVL 134
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
++ L K++ DEA LD + + + ++D LC R +A+ ++
Sbjct: 135 DSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKE 194
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP-DVFTYTILIDGLCKVGRLK 282
RG+ + L LC ++++AI ++ + P V Y L CK G
Sbjct: 195 RGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAA 254
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+A+ +F + + GY V YT ++ YCK+ A+ L +M D + +I
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 343 RALFEKGENDKGEKLLREMVARGLLYN 369
+ G DKG + +M+ +G+ N
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSN 341
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 88 VEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKD 146
V + T + ++ L K G +A + F M K GVK +T++ +SLMD + A +
Sbjct: 201 VTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHE 260
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+F L + + PD +++ I+I+G CK + D+A ++D M + D + Y S ++ C
Sbjct: 261 VF-LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K G +++ EM G P+V+TY ++ L KS V +A+ + +++++ G PD
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
Y+ LI L K GR KDA EIF+D+ +G V Y MI+ + AL L+ +M
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Query: 327 E 327
E
Sbjct: 440 E 440
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A LE+ + VK D + +++D+L K+ + A++++ ++ I P+A T+ LI+GF
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGF 283
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
C + A +++ M + +V T+ V+A CKEG+ + + M + G PN
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V+Y+ +M K+V +A ++ M + G PD + Y+ +I+ L K +A ++ ++
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFED 403
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH---RGTPPDVITYNPLLDVLCK 242
M ++ + D + YN++I R A +L+ M P+V TY PLL + C
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCH 463
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+ L+ + + DV TY +LI GLC G++++A F++ + KG
Sbjct: 464 KKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 11/333 (3%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+ ++ L K + A D + EM + + + SL+ ++ A +E+
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA----HEVF 262
Query: 83 LKRMDV---EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
LK D + TFNIL+ CK +A+ + +M P+ V+Y+S ++ YC
Sbjct: 263 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ + ++ M + G +P+V +YTI+++ L K K V EA + ++M + + D Y+
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
SLI L K GR DA ++ +M ++G DV+ YN ++ + A+ L+K ++D+
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Query: 260 ---GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
P+V TY L+ C ++K + ++ ++ V Y ++I G C G
Sbjct: 443 EGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKV 502
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
+EA + G +P T ++++ L +K
Sbjct: 503 EEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 535
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 40/285 (14%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
HT+N +VD L K N F +M + LV E+NK ++
Sbjct: 167 HTYNAMVDVLGKCRN-------FDLM------------------WELVNEMNKNEE---- 197
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH-SEKIIADTICYNSLIDGLCKLG 209
+ V+ D S ++ L K ++A EM S + DTI NSL+D L K
Sbjct: 198 --SKLVTLDTMSK--VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN 253
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
I A ++ ++ PD T+N L+ CK+ D A A++ ++ PDV TYT
Sbjct: 254 SIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYT 312
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS 329
++ CK G + E+ +++ G N V YT++++ K EAL + KM+
Sbjct: 313 SFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 330 GRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG-----LLYN 369
G +PDA Y +I L + G ++ +M +G L+YN
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYN 417
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
+ A ++L++ PDVV YT+ +++ CK+ ++ EM PN VTYT ++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ Q+ +A+G+ +M + ++ L+ L K G K+A +F M QGV+
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNL-MVKR-------GVSPDVQSYTIIINGLCKIK 174
+ + Y++++ ++ ++D L ++KR SP+V++Y ++ C K
Sbjct: 411 RDVLVYNTMISA-----ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKK 465
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
+ LL M + D Y LI GLC G++ +A E +G P T
Sbjct: 466 KMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCK 525
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGI 261
L+D L K + + + + +Q + +
Sbjct: 526 MLVDELEKKNMAEAKLKIQSLVQSKTM 552
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE +R P+VV YT ++ SL K K V++A +Y +M P+A Y+SLI+
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDA------------LCKEGNVKEAKN---- 111
G+ + A + +M + + +V +N ++ A L K +E ++
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 112 ----------------------VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
+ M+K V + +Y L+ G C+ +V +A F
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
V++G+ P + ++++ L K M + K+ + S+ +I
Sbjct: 511 EAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMI 553
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 166/356 (46%), Gaps = 4/356 (1%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R P+ M I+ L + S A ++++ + Y +++ + G+
Sbjct: 184 RHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMMGVYSRSGKFS 242
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKE--AKNVFAVMMKQGVKPNTVSYSS 130
+A L++ M + ++ +FN L++A K G + A + ++ G++P+ ++Y++
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNT 302
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ ++ A +F M PD+ +Y +I+ + + EA +L E+ +
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKG 362
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
D + YNSL+ + ++ +M G D +TYN ++ + K +D A+
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 251 ALIKEIQD-QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
L K+++ G PD TYT+LID L K R +A + ++L G T+Q Y+ +I G
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
Y K G +EA S M SG PD + Y +++ L E K L R+M++ G
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 171/366 (46%), Gaps = 41/366 (11%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSD--AYDLYSEMVAKRIPPNAV 56
G+ S A EL +R++ PD++ + T+I++ K ++ A +L + + P+A+
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
TY +L+ L AV + +M R ++ T+N ++ + G EA+ +F +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+G P+ V+Y+SL+ + + K K+++ M K G
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG------------------- 399
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH-RGTPPDVITYNP 235
D + YN++I K G++ A +L +M G PD ITY
Sbjct: 400 ----------------KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+D L K++ +A AL+ E+ D GIKP + TY+ LI G K G+ ++A++ F +L G
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
AY+VM++ + +A L M S G P YE++I L ++ +D +
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Query: 356 KLLREM 361
K +R+M
Sbjct: 564 KTIRDM 569
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 158/340 (46%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
MYT II++ K KL A + + P+ T+ SL+ + G ++A + N M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+ V + NIL+ ALC +G ++E V + G K + S ++D + +
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+ K I++ M G P ++ Y ++I LCK K V +A ++ EM + +NS+
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ + ++ + G PD TYN L+ + C+ ++ L++++++ G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
P + TY LI K L+ A+++F+++L KG + Y M+ G +A
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
L+ M+++G P T +++ + G + EK+L +
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 3/242 (1%)
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE--AWKLLDE 185
Y+++M Y + +KA+++ + M +RG PD+ S+ +IN K + A +LLD
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
+ + + D I YN+L+ + + A K+ +M PD+ TYN ++ V +
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+A L E++ +G PD TY L+ + + +E++Q + G+ Y
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 306 MINGYCKEGLCDEALALISKMES-SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+I+ Y K+G D AL L M+ SGR PDA+TY ++I +L + + L+ EM+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 365 GL 366
G+
Sbjct: 468 GI 469
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 172/382 (45%), Gaps = 36/382 (9%)
Query: 21 VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNE 80
MY T++ ++ ++A ++S++ + S++ +C +G + A ++N+
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 81 MILKRMDVEVHT-FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
K + +++A K+ ++A++V + + G P+ +++SLM Y
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH--SEKIIADTIC 197
+A+ IFN M++ G SP V+S I+++ LC ++E + +++E+ KI +I
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSIL 861
Query: 198 ---------------------------------YNSLIDGLCKLGRISDAWKLVNEMHHR 224
Y +I+ LCK R+ DA +V+EM
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 225 GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDA 284
++ +N +L + + K + + + I++ G++PD TY LI C+ R ++
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ Q + G + + Y +I+ + K+ ++A L ++ S G D Y +++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 345 LFEKGENDKGEKLLREMVARGL 366
+ G + K EKLL+ M G+
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGI 1063
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 149/364 (40%), Gaps = 48/364 (13%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI--YGF 65
L+++R ++PD + Y T++ + +D + A ++ +M A R P+ TY ++I YG
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV---- 121
C G +A L E+ LK + T+N L+ A +E N ++ K V+ M K G
Sbjct: 345 C--GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 122 --------------------------------KPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
P+ ++Y+ L+D +A + +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 150 LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
M+ G+ P +Q+Y+ +I G K +EA M D + Y+ ++D L +
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTY 268
AW L +M G P Y ++ L K + D I+++++ G+ P +
Sbjct: 523 ETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-LEIS 581
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS--KM 326
++L+ G C A + + GY + ++ Y G EA L+ K
Sbjct: 582 SVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE 637
Query: 327 ESSG 330
+SG
Sbjct: 638 HASG 641
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/339 (18%), Positives = 150/339 (44%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A + R P V ++ +LC D + + Y + E+ + + ++ F
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAF 867
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G + + + + M + + ++++ LCK V++A+ + + M + K
Sbjct: 868 ARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVEL 927
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
++S++ Y +++ K ++ + + G+ PD +Y +I C+ + +E + L+ +
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M + + Y SLI K + A +L E+ +G D Y+ ++ + S +
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
KA L++ +++ GI+P + T +L+ G ++A+++ ++ +T Y+
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+I+ Y + + + + +M+ G PD + +RA
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/393 (17%), Positives = 154/393 (39%), Gaps = 42/393 (10%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC------ 66
R KPD + Y+ ++D L + A+ LY +M++ P+ Y +I G
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Query: 67 ----IVGQLQQAVGL---------------------LNEMILKRMDVEVHTFNILVDALC 101
+ +++ G+ L I ++E T ++ +
Sbjct: 561 DIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYS 620
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF--NLMVKRGVSPD 159
G EA + + + + +L+ +C V ++ A D + + V
Sbjct: 621 SSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGS 680
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
Y +++ + EA ++ ++ A S++ CKLG A ++VN
Sbjct: 681 STMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVN 740
Query: 220 EMHHRG-----TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+ +G +P Y +++ K KA +++ ++ G PD+ T+ L+
Sbjct: 741 QAETKGFHFACSP----MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
+ G + A+ IF ++ G + TV++ ++++ C +G +E ++ +++ G
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ +++ A G + +K+ M A G L
Sbjct: 857 KSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 140/276 (50%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
HT+ +V L + E + M++ G KPNTV+Y+ L+ Y + +A ++FN
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
M + G PD +Y +I+ K +D A + M + DT Y+ +I+ L K G
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+ A +L EM +G P+++T+N ++ + K+ N + A+ L +++Q+ G +PD TY+I
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+++ L G L++A+ +F ++ K + Y ++++ + K G D+A M +G
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
P+ T ++ + LL+ M+A GL
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
L R+ K D YTT++ +L + K + L EMV PN VTY LI+ +
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
L++A+ + N+M + + T+ L+D K G + A +++ M + G+ P+T +YS
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ + A +F MV +G +P++ ++ I+I K + + A KL +M +
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
D + Y+ +++ L G + +A + EM + PD Y L+D+ K+ NVDKA
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
+ + G++P+V T L+ +V R+ +A + Q +L G + ++Q YT++++
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
TYT+++ Q + LL+EM+ T+N L+ + + +KEA NVF M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+ G +P+ V+Y +L+D + ++ A D++ M + G+SPD +Y++IIN L K +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
A +L EM + + + +N +I K A KL +M + G PD +TY+ +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
++VL +++A + E+Q + PD Y +L+D K G + A + +Q +L G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
V +++ + + EA L+ M + G P TY +++
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
GE + L+ + R KP+ V Y +I S + + +A +++++M P+ VTY +
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCT 434
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
LI G L A+ + M + + T++++++ L K G++ A +F M+ QG
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
PN V+++ ++ + + A ++ M G PD +Y+I++ L ++EA
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ EM + + D Y L+D K G + AW+ M G P+V T N LL
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ H + +A L++ + G+ P + TYT+L+
Sbjct: 615 LRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 5/230 (2%)
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
MD Y N + L + G D +YT ++ L + K E KLLDEM +
Sbjct: 336 MDNY-----ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC 390
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+T+ YN LI + + +A + N+M G PD +TY L+D+ K+ +D A+
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ + +Q+ G+ PD FTY+++I+ L K G L A +F +++ +G + + +MI +
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
K + AL L M+++G PD VTY I++ L G ++ E + EM
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 134/289 (46%), Gaps = 11/289 (3%)
Query: 90 VHTFNILVDA------LCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVN 142
+H F +DA L + N A F + +Q G K + +Y++++ K+
Sbjct: 317 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 376
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+ + + MV+ G P+ +Y +I+ + + EA + ++M D + Y +LI
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
D K G + A + M G PD TY+ +++ L K+ ++ A L E+ QG
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN--GYCKEGLCDEAL 320
P++ T+ I+I K + A ++++D+ G+ Y++++ G+C G +EA
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAE 554
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ ++M+ +PD Y +++ + G DK + + M+ GL N
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 172/355 (48%), Gaps = 4/355 (1%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R++ + PD Y+T+I S K+ + A +M R+ + V Y++LI +
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+A+ + + + + ++ +N +++ K +EA+ + M + GV PNTVSYS+
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ Y + +A +F M + + D+ + I+I+ ++ MV EA +L +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I + + YN+++ + +A L M + +V+TYN ++ + K+ +KA
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L++E+Q +GI+P+ TY+ +I K G+L A +FQ + G + Y MI Y
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ GL A L+ ++ ++PD + E I L + G ++ + R+ G
Sbjct: 481 ERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 172/358 (48%), Gaps = 4/358 (1%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
L+R + PD+V Y ++I+ K KL +A L EM + PN V+Y++L+ + +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+A+ + EM +++ T NI++D + VKEA +F + K ++PN VSY++
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
++ Y + +A +F LM ++ + +V +Y +I K ++A L+ EM S
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I + I Y+++I K G++ A L ++ G D + Y ++ + + A
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
L+ E++ PD I L K GR ++A +F+ G + + MIN Y
Sbjct: 491 RLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY 546
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
+ + + KM ++G PD+ +++ A ++ E +K + + REM G ++
Sbjct: 547 SRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVF 604
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 167/344 (48%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V Y ++ ++ + K A+ L+ EM + + P+ TY++LI F G A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L +M R+ ++ ++ L++ + + +A ++F+ + + G+ P+ V+Y+S+++ Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K +A+ + M + GV P+ SY+ +++ + EA + EM D
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
N +ID +L + +A +L + P+V++YN +L V ++ +AI L + +Q
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ I+ +V TY +I K + A + Q++ +G Y+ +I+ + K G D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
A L K+ SSG D V Y+ +I A G ++LL E+
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 154/314 (49%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P+ Y ++ Q A GL +EM + + + +T++ L+ + KEG A +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
M + V + V YS+L++ + + +KA IF+ + + G++PD+ +Y +IN K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 173 IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
K+ EA L+ EM+ ++ +T+ Y++L+ + + +A + EM D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 233 YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
N ++DV + V +A L ++ I+P+V +Y ++ + +A +F+ +
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 293 IKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
K V Y MI Y K ++A L+ +M+S G P+A+TY II + G+ D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 353 KGEKLLREMVARGL 366
+ L +++ + G+
Sbjct: 453 RAATLFQKLRSSGV 466
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQ-SYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADT 195
+ + K++F+L+ D Q S +++ L + + LLD +H E K
Sbjct: 99 IHQTQNEKELFSLL---STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSV 155
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
YN ++ + + + A L +EM R PD TY+ L+ K D A++ +++
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ + D+ Y+ LI+ ++ A IF + G + AY MIN Y K L
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFE 347
EA LI +M +G +P+ V+Y ++ E
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%)
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
+P V +Y +++ + + K D A L DEM + D Y++LI K G A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
+ +M D++ Y+ L+++ + + KAI++ ++ GI PD+ Y +I+
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
K ++A+ + +++ G +Y+ +++ Y + EAL++ ++M+ D
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 337 TYEIII 342
T I+I
Sbjct: 332 TCNIMI 337
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
P V YN +L + ++ D A L E++ + + PD +TY+ LI K G A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCD--EALALISKMESSGRMPDAVTYEIIIRAL 345
Q + + + Y+ +I LCD +A+++ S+++ SG PD V Y +I
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIE--LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 346 FEKGENDKGEKLLREMVARGLLYN 369
+ + L++EM G+L N
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPN 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
GE L++R+ ++ +VV Y T+I K A +L EM ++ I PNA+TY++
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I I G K G + A +F + G
Sbjct: 441 II---SIWG--------------------------------KAGKLDRAATLFQKLRSSG 465
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V+ + V Y +++ Y V + AK + + + PD I L K +EA
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAGRTEEAT 521
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ + + D + +I+ + R + ++ +M G PD +L+
Sbjct: 522 WVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 241 CKSHNVDKAIALIKEIQDQG-IKPDVFTYTIL 271
K +KA + +E+Q++G + PD + +L
Sbjct: 582 GKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 3/349 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+ + I+ C+ VS+A+ + M+ I + ++ L+ GF G+ Q+AV L
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
N+MI + T+ L+ G V EA V + + +G+ P+ V + ++ Y
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +A+ +F + KR + PD ++ I++ LC D ++ H D +
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVT 386
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
N L + K+G S A K+++ M ++ D TY L LC+ AI + K I
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII 446
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ D ++ +ID L ++G+ A +F+ +++ Y + V +YTV I G + +
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIE 506
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
EA +L M+ G P+ TY II L ++ E +K K+LRE + G+
Sbjct: 507 EAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 154/327 (47%), Gaps = 36/327 (11%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ V +++ ++ + A DL+++M+ PN VTYTSLI GF +G + +A
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L+++ + + ++ N+++ + G +EA+ VF + K+ + P+ +++S++
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSL 362
Query: 136 CLVKEVN--------------------------------KAKDIFNLMVKRGVSPDVQSY 163
CL + + A + ++M + + D +Y
Sbjct: 363 CLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTY 422
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
T+ ++ LC+ A K+ + EK D ++++ID L +LG+ + A L
Sbjct: 423 TVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCIL 482
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
P DV++Y + L ++ +++A +L ++++ GI P+ TY +I GLCK +
Sbjct: 483 EKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEK 542
Query: 284 AQEIFQDILIKGY----NVTVQAYTVM 306
++I ++ + +G N Q Y+++
Sbjct: 543 VRKILRECIQEGVELDPNTKFQVYSLL 569
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG---- 64
L +R+LV PD + +I+ SLC +S +DL RI T L+ G
Sbjct: 342 SLEKRKLV-PDQYTFASILSSLC----LSGKFDL-----VPRITHGIGTDFDLVTGNLLS 391
Query: 65 --FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F +G A+ +L+ M K ++ +T+ + + ALC+ G + A ++ +++K+
Sbjct: 392 NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
+ +S+++D + + N A +F + DV SYT+ I GL + K ++EA+ L
Sbjct: 452 LDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD 229
+M I + Y ++I GLCK K++ E G D
Sbjct: 512 CCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 19/275 (6%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
+++ F +L++ + +A V+ M G PNT + + +MD + VN A +
Sbjct: 105 EIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALE 164
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCK---------IKMVDEAWKLLDEMHSEKIIADTIC 197
IF + R + S+ I ++ C +K+V L M E +
Sbjct: 165 IFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIV------LKRMIGEGFYPNRER 214
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+ ++ C+ G +S+A+++V M G V ++ L+ +S KA+ L ++
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
G P++ TYT LI G +G + +A + + +G + +MI+ Y + G +
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
EA + + +E +PD T+ I+ +L G+ D
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 108/229 (47%), Gaps = 7/229 (3%)
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
+KA +++ M G P+ ++ ++++ K+ +V+ A ++ + + + ++
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFS----FDIA 180
Query: 202 IDGLCKLGRISD--AWKLV-NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
+ C G D K+V M G P+ + +L + C++ V +A ++ +
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
GI V +++L+ G + G + A ++F ++ G + + YT +I G+ G+ DE
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
A ++SK++S G PD V ++I G ++ K+ + R L+
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 148/289 (51%), Gaps = 6/289 (2%)
Query: 32 KDKLVSDAYDLYSEMVA-KRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV 90
K +SDA L++ + A RIP + + S++ + + + V L ++ + +
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 91 --HTFNILVDALCK--EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
TF IL+ C+ + ++ V +M+ G++P+ V+ + C V++AKD
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSLIDGL 205
+ + ++ PD +Y ++ LCK K + ++ +DEM + + D + + LID +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
C + +A LV+++ + G PD YN ++ C +A+ + K+++++G++PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
TY LI GL K GR+++A+ + ++ GY YT ++NG C++G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 17/272 (6%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR--IPPNAVTYTSLIYGFCIV--GQLQQA 74
D+ + +++ S +V+D L+ ++ + P T+ L+ C +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+LN M+ ++ + T +I V +LC+ G V EAK++ + ++ P+T +Y+ L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 135 YCLVKE-------VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
C K+ V++ +D F+ V PD+ S+TI+I+ +C K + EA L+ ++
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ D YN+++ G C L + S+A + +M G PD ITYN L+ L K+ V+
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
+A +K + D G +PD TYT L++G+C+ G
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSY-SSLMDGYCLVKEVNKAKDIFNLMVKR--GVSP 158
K N+ +AK++F + P + + +S++ Y + VN +F ++K P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 159 DVQSYTIIINGLCKI--KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
++ I+++ C+ + ++L+ M + + D + + + LC+ GR+ +A
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGL 275
L+ E+ + +PPD TYN LL LCK ++ + E++D +KPD+ ++TILID +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C L++A + + G+ Y ++ G+C EA+ + KM+ G PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARG 365
+TY +I L + G ++ L+ MV G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L+ ++PD V + SLC+ V +A DL E+ K PP+ TY L+ C
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 68 VGQLQQAVGLLNEMILKRMDVEVH----TFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
L ++EM R D +V +F IL+D +C N++EA + + + G KP
Sbjct: 207 CKDLHVVYEFVDEM---RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
+ Y+++M G+C + + ++A ++ M + GV PD +Y +I GL K V+EA L
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLG 209
M DT Y SL++G+C+ G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 179/395 (45%), Gaps = 39/395 (9%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
+LR+ +PDV+ + +ID+ + +A LY +++ R P TY LI +C+ G
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 70 QLQQAVGLLNEMILKRMD---VEVHTFNILVDALCK-EGNVKEAKNVFAVMMKQGVKPNT 125
+++A +L EM + + V +N ++ L K +GN +EA +VF M + KP T
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
+Y+ +++ Y + + ++ M P++ +YT ++N + + ++A ++ ++
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN----------- 234
+ + + D YN+L++ + G A ++ + M H G PD +YN
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 235 -----------------P-------LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
P LL K+ +V K A++KE+ + G++PD F
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+++ ++G+ ++I ++ + Y ++IN Y K G + L +++
Sbjct: 467 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 526
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
PD VT+ I A K K ++ EM+ G
Sbjct: 527 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 153/297 (51%), Gaps = 3/297 (1%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G T A+++ ++R KP Y +I+ K ++ LY EM + + PN TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ F G ++A + ++ ++ +V+ +N L+++ + G A +F++M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G +P+ SY+ ++D Y + A+ +F M + G++P ++S+ ++++ K + V +
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++ EM + DT NS+++ +LG+ + K++ EM + D+ TYN L++
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+ K+ +++ L E++++ +PDV T+T I + E+F++++ G
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 6/296 (2%)
Query: 77 LLNEMILKRMDVE--VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L+ E IL++ + V FN+L+DA ++ KEA++++ +++ P +Y+ L+
Sbjct: 162 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 221
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPD---VQSYTIIINGLCKIK-MVDEAWKLLDEMHSEK 190
YC+ + +A+ + M VSP V Y I GL K K +EA + M ++
Sbjct: 222 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 281
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
T YN +I+ K + +WKL EM P++ TY L++ + +KA
Sbjct: 282 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 341
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ +++Q+ G++PDV+ Y L++ + G A EIF + G +Y +M++ Y
Sbjct: 342 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ GL +A A+ +M+ G P ++ +++ A + + K E +++EM G+
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 88/185 (47%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
+ A E ++R + P + + ++ + K + V+ + EM + P+ S++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ +GQ + +L EM ++ T+NIL++ K G ++ + +F + ++ +
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ V+++S + Y K K ++F M+ G +PD + ++++ + V++ +
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 588
Query: 183 LDEMH 187
L MH
Sbjct: 589 LRTMH 593
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 179/395 (45%), Gaps = 39/395 (9%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
+LR+ +PDV+ + +ID+ + +A LY +++ R P TY LI +C+ G
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 70 QLQQAVGLLNEMILKRMD---VEVHTFNILVDALCK-EGNVKEAKNVFAVMMKQGVKPNT 125
+++A +L EM + + V +N ++ L K +GN +EA +VF M + KP T
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
+Y+ +++ Y + + ++ M P++ +YT ++N + + ++A ++ ++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN----------- 234
+ + + D YN+L++ + G A ++ + M H G PD +YN
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 235 -----------------P-------LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
P LL K+ +V K A++KE+ + G++PD F
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+++ ++G+ ++I ++ + Y ++IN Y K G + L +++
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
PD VT+ I A K K ++ EM+ G
Sbjct: 505 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 153/297 (51%), Gaps = 3/297 (1%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G T A+++ ++R KP Y +I+ K ++ LY EM + + PN TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ F G ++A + ++ ++ +V+ +N L+++ + G A +F++M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G +P+ SY+ ++D Y + A+ +F M + G++P ++S+ ++++ K + V +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
++ EM + DT NS+++ +LG+ + K++ EM + D+ TYN L++
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+ K+ +++ L E++++ +PDV T+T I + E+F++++ G
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 6/296 (2%)
Query: 77 LLNEMILKRMDVE--VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L+ E IL++ + V FN+L+DA ++ KEA++++ +++ P +Y+ L+
Sbjct: 140 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 199
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPD---VQSYTIIINGLCKIK-MVDEAWKLLDEMHSEK 190
YC+ + +A+ + M VSP V Y I GL K K +EA + M ++
Sbjct: 200 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 259
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
T YN +I+ K + +WKL EM P++ TY L++ + +KA
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ +++Q+ G++PDV+ Y L++ + G A EIF + G +Y +M++ Y
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ GL +A A+ +M+ G P ++ +++ A + + K E +++EM G+
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 88/185 (47%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
+ A E ++R + P + + ++ + K + V+ + EM + P+ S++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ +GQ + +L EM ++ T+NIL++ K G ++ + +F + ++ +
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ V+++S + Y K K ++F M+ G +PD + ++++ + V++ +
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 566
Query: 183 LDEMH 187
L MH
Sbjct: 567 LRTMH 571
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)
Query: 21 VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNE 80
++Y I+D L K + + + ++ EM + N TY L+ + ++ +AVG+
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 81 MILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
+D ++ F+ L+ LC+ +V+ A+ +F ++ + + + +++G+C++
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGN 262
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
V++AK + ++ PDV SY +IN L K + +A +L M + D N+
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ID LC RI +A ++ E+ +G P+V+TYN LL LCK +K L++E++ +G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 261 --IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
P+ T++ L L R KD + + + +T Y +M Y + ++
Sbjct: 383 GSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ S+ME SG PD TY I I L KG+ + +EM+++G++
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 136/291 (46%), Gaps = 30/291 (10%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+V + ++ LC+ K V A L+ + + ++ G+C++G + +A
Sbjct: 212 DLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++I + +V ++ +++AL K+G + +A ++ M P+ ++++D C
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
K + +A ++F + ++G P+V +Y ++ LCKI+ ++ W+L++EM
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM------------ 378
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI--------------TYNPLLDVLCKSH 244
L G C ++ ++ L + R D++ YN + + +
Sbjct: 379 -ELKGGSCSPNDVTFSYLL--KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+K + E++ G+ PD TYTI I GL G++ +A FQ+++ KG
Sbjct: 436 KEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
++ ++ YN ++D L K+ R + ++ +EM R + TY LL+ +H VD+A+
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ + ++ GI D+ + L+ LC+ ++ A+ +F + + ++A +++NG+C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWC 258
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
G EA + +S PD V+Y +I AL +KG+ K +L R M
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM 308
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 47/382 (12%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV---TYTSLIYGFCIVGQLQQAVGLL 78
++ ++++SLCK + A+ L + V N V T+ LI + G +QQA+
Sbjct: 137 LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 79 N-----EMILKRMDVEVHTFNILVDALCKEGNVKEAK------------------NVFAV 115
E + K E+ +L+DALCKEG+V+EA +F +
Sbjct: 197 EFARSYEPVCKSA-TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 116 MM---------KQG-----------VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
++ KQ VKP V+Y +L++GYC ++ V A ++ M
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
+ + + II+GL + + EA +++ + + YNSL+ CK G + A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
K++ M RG P TYN K + ++ + L ++ + G PD TY +++ L
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 276 CKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA 335
C+ G+L A ++ +++ +G + + T++I+ C+ + +EA G +P
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 336 VTYEIIIRALFEKGENDKGEKL 357
+T+++I L KG +D ++L
Sbjct: 496 ITFKMIDNGLRSKGMSDMAKRL 517
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP VV Y T+I+ C+ + V A ++ EM + N + + +I G G+L +A+
Sbjct: 281 VKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEAL 340
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
G++ + + T+N LV CK G++ A + +MM +GV P T +Y+ +
Sbjct: 341 GMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYF 400
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ + +++ +++ G SPD +Y +I+ LC+ + A ++ EM + I D
Sbjct: 401 SKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDL 460
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+ LI LC+L + +A++ + RG P IT+
Sbjct: 461 LTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE ++ ++ + +++ IID L + +S+A + P VTY SL+ FC
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G L A +L M+ + +D T+N K +E N++ +++ G P+ ++
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y ++ C +++ A + M RG+ PD+ + T++I+ LC+++M++EA++ D
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWK----LVNEMHHRGTPPDVITYNPLLDV 239
II I + + +GL G +SD K L++ + H P+ TY +D
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKG-MSDMAKRLSSLMSSLPHSKKLPN--TYREAVDA 540
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 148/316 (46%), Gaps = 1/316 (0%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P ++ Y L + + +L +M +D+ T +++ K G+V +A +
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 113 FAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
F + K G + Y+SL+ C VK + A + M+++G+ PD ++Y I++NG C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+ EA + LDEM + LI+GL G + A ++V++M G PD+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
T+N L++ + KS V+ I + G+ D+ TY LI + K+G++ +A + +
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
+ G+ Y +I G C+ G+ D+A + S M+ P+ Y ++I G+
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 352 DKGEKLLREMVARGLL 367
L EM GL+
Sbjct: 409 VDAANYLVEMTEMGLV 424
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 156/337 (46%), Gaps = 3/337 (0%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + Y + SL K + + +M + + T +I + G + QAV L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 78 LNEMILKRMDVE--VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
N + K + + V +N L+ ALC A + M+++G+KP+ +Y+ L++G+
Sbjct: 169 FNG-VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C ++ +A++ + M +RG +P + ++I GL ++ A +++ +M + D
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+N LI+ + K G + ++ G D+ TY L+ + K +D+A L+
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ G KP Y +I G+C+ G DA F D+ +K + YT++I + G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
+A + +M G +P + ++++ L G++D
Sbjct: 408 FVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHD 444
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 6 AALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
A L+RR + +KPD Y +++ C + +A + EM + P A LI
Sbjct: 200 GAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLI 259
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G G L+ A ++++M ++ TFNIL++A+ K G V+ ++ K G+
Sbjct: 260 EGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLC 319
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
+ +Y +L+ + ++++A + N V+ G P Y II G+C+ M D+A+
Sbjct: 320 VDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSF 379
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+M + + Y LI + G+ DA + EM G P ++ + D L
Sbjct: 380 FSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKN 439
Query: 243 SHNVDKAIALIK-EIQDQGI 261
D A+ + + E+Q +G+
Sbjct: 440 GGKHDLAMRIEQLEVQLRGV 459
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 165/340 (48%), Gaps = 10/340 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L +L + P+V+ YT +++S + ++A ++ M + P+A+TY ++ F
Sbjct: 162 LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVE 221
Query: 68 VGQLQQAVGLLNEMILKR---MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ ++A + ++ ++ + + +++++ K GN ++A+ VF+ M+ +GV +
Sbjct: 222 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS 281
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
TV+Y+SLM KEV+K I++ M + + PDV SY ++I + + +EA + +
Sbjct: 282 TVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE 338
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
EM + YN L+D G + A + M PD+ +Y +L +
Sbjct: 339 EMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS 398
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG--YNVTVQA 302
+++ A K I+ G +P++ TY LI G K ++ E+++ + + G N T+
Sbjct: 399 DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 458
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+ +G CK AL +MES G PD +++
Sbjct: 459 TIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
F +L+ A K GN A+ V +V+ K G PN +SY++LM+ Y + N A+ IF M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 153 KRGVSPDVQSYTIIINGLC---KIKMVDEAWK-LLDEMHSEKIIADTICYNSLIDGLCKL 208
G P +Y II+ K K +E ++ LLDE S + D Y+ +I K
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS-PLKPDQKMYHMMIYMYKKA 260
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
G A K+ + M +G P +TYN L+ V K + ++Q I+PDV +Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSY 317
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+LI + R ++A +F+++L G T +AY ++++ + G+ ++A + M
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD +Y ++ A + + EK + + G N
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 151/319 (47%), Gaps = 10/319 (3%)
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVF 113
+ + LI + +G A +L+ +L +M V ++ L+++ + G A+ +F
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLS--VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV---KRGVSPDVQSYTIIINGL 170
M G +P+ ++Y ++ + + +A+++F ++ K + PD + Y ++I
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
K ++A K+ M + + T+ YNSL+ +S K+ ++M PDV
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDV 314
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD 290
++Y L+ ++ ++A+++ +E+ D G++P Y IL+D G ++ A+ +F+
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 291 ILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+ + +YT M++ Y + A +++ G P+ VTY +I+ + +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 351 NDKGEKLLREMVARGLLYN 369
+K ++ +M G+ N
Sbjct: 435 VEKMMEVYEKMRLSGIKAN 453
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V V Y +++ K VS YD +M I P+ V+Y LI + + ++A+
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ EM+ + +NIL+DA G V++AK VF M + + P+ SY++++ Y
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 394
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
++ A+ F + G P++ +Y +I G K V++ ++ ++M I A+
Sbjct: 395 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 454
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+++D + A EM G PPD N LL + +++A L
Sbjct: 455 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E S + ++R ++PDVV Y +I + + + +A ++ EM+ + P Y L+
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F I G ++QA + M R+ ++ ++ ++ A +++ A+ F + G +
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN V+Y +L+ GY +V K +++ M G+ + T I++ + K A
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Query: 183 LDEMHSEKIIADTICYNSLI 202
EM S + D N L+
Sbjct: 477 YKEMESCGVPPDQKAKNVLL 496
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 169/348 (48%), Gaps = 2/348 (0%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+ T+ID K ++DA +L+SEM+ +P + VT+ ++I+ G L +A LL +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
K + + T+NIL+ G+++ A + + K G+ P+TV++ +++ C K V
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+ + + M + + D S +I+ +V +A L + + +++ T ++I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVI 486
Query: 203 DGLCKLGRISDAWKLV-NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
D + G +A + + + G DV+ YN ++ K+ +KA++L K +++QG
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
PD TY L L V + +AQ I ++L G + Y MI Y + GL +A+
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
L ME +G P+ V Y +I E G ++ + R M G+ N
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 1/278 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+ DV+ Y +I + K KL A L+ M + P+ TY SL V + +A
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+L EM+ T+ ++ + + G + +A +++ M K GVKPN V Y SL++G+
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V +A F +M + GV + T +I K+ ++EA ++ D+M + D
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
NS++ LG +S+A + N + +GT DVI++ ++ + +D+AI + +E+
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
++ G+ D ++ ++ G+L + E+F ++L++
Sbjct: 751 RESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 174/405 (42%), Gaps = 40/405 (9%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ AALE +R+ + PD V + ++ LC+ K+V++ + +EM I + +
Sbjct: 389 GDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV 448
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMIL------------------KRMDVEVHT-------- 92
++ + G + QA L L K + VE T
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 93 ---------FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+N+++ A K ++A ++F M QG P+ +Y+SL V V++
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A+ I M+ G P ++Y +I ++ ++ +A L + M + + + Y SLI+
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G + G + +A + M G + I L+ K +++A + +++D P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
DV ++ +G + +A+ IF + KG V ++ M+ Y G+ DEA+ +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM-VARGLL 367
+M SG + D ++ ++ G+ + +L EM V R LL
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLL 792
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 4/327 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KP Y +I S + L+SDA DLY M + PN V Y SLI GF G +++A+
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
M + L+ A K G ++EA+ V+ M P+ + +S++
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCA 701
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ V++A+ IFN + ++G DV S+ ++ + M+DEA ++ +EM +++D
Sbjct: 702 DLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCT 760
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMH-HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+N ++ G++S+ +L +EM R D T+ L +L K +A++ ++
Sbjct: 761 SFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQT 820
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ KP + T I +G A E Q++ AY +I Y G
Sbjct: 821 AYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGD 878
Query: 316 CDEALALISKMESSGRMPDAVTYEIII 342
D AL +M+ G PD VT ++
Sbjct: 879 IDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 23/316 (7%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V P Y ++D K LV +A M + P+ VT +++ F G+ +A
Sbjct: 176 VLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRAD 235
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
++D+++ + +D K G+ + N+ + + K
Sbjct: 236 RFFKGWCAGKVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFK------------- 278
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC----KIKMVDEAWKLLDEMHSEKI 191
V N + + SP T N L K +++A L EM +
Sbjct: 279 --VGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGV 336
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
DT+ +N++I G +S+A L+ +M +G PD TYN LL + + +++ A+
Sbjct: 337 PIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALE 396
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
++I+ G+ PD T+ ++ LC+ + + + + ++ + + V++ Y
Sbjct: 397 YYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYV 456
Query: 312 KEGLCDEALALISKME 327
EGL +A AL + +
Sbjct: 457 NEGLVVQAKALFERFQ 472
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 22/318 (6%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
PN + Y ++ G+ + EM + +T+ +LVD K G VKEA
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT-IIING-- 169
M ++ P+ V+ ++++ + E ++A F V D+ S NG
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 170 -------------LCKIKMVDEAWKLLD----EMHSEKIIADTICYNSLIDGLCKLGRIS 212
L K+ + K L S + T +N+LID K GR++
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH-NVDKAIALIKEIQDQGIKPDVFTYTIL 271
DA L +EM G P D +T+N ++ C +H ++ +A +L+K+++++GI PD TY IL
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
+ G ++ A E ++ I G + +++ C+ + E A+I++M+ +
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 332 MPDAVTYEIIIRALFEKG 349
D + +I++ +G
Sbjct: 442 RIDEHSVPVIMQMYVNEG 459
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 136/313 (43%), Gaps = 35/313 (11%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E + + VKP+ V+Y ++I+ + +V +A + M + N + TSLI + V
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L++A + ++M +V N ++ G V EA+++F + ++G + +S+
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISF 727
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+++M Y + +++A ++ M + G+ D S+ ++ + E +L EM
Sbjct: 728 ATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV 787
Query: 189 E-KIIADTICYNSLIDGLCKLGRISDAWKLV----NEMHHRGTPPDVIT----------- 232
E K++ D + +L L K G S+A + NE TP T
Sbjct: 788 ERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYA 847
Query: 233 ------------------YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
YN ++ S ++D A+ +Q++G++PD+ T L+
Sbjct: 848 LESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGI 907
Query: 275 LCKVGRLKDAQEI 287
K G ++ + +
Sbjct: 908 YGKAGMVEGVKRV 920
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
Q P+V Y I++ L + G+ + + + ++ G T Y ++++ Y K GL E
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
AL I M PD VT ++R GE D+ ++ + A
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA 243
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 162/332 (48%), Gaps = 10/332 (3%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L +L + P+V+ YT +++S + ++A ++ M + P+A+TY ++ F
Sbjct: 169 LSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVE 228
Query: 68 VGQLQQAVGLLNEMILKR---MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ ++A + ++ ++ + + +++++ K GN ++A+ VF+ M+ +GV +
Sbjct: 229 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS 288
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
TV+Y+SLM KEV+K I++ M + + PDV SY ++I + + +EA + +
Sbjct: 289 TVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE 345
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
EM + YN L+D G + A + M PD+ +Y +L +
Sbjct: 346 EMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS 405
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG--YNVTVQA 302
+++ A K I+ G +P++ TY LI G K ++ E+++ + + G N T+
Sbjct: 406 DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 465
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPD 334
+ +G CK AL +MES G PD
Sbjct: 466 TIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
F +L+ A K GN A+ V +V+ K G PN +SY++LM+ Y + N A+ IF M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 153 KRGVSPDVQSYTIIINGLC---KIKMVDEAWK-LLDEMHSEKIIADTICYNSLIDGLCKL 208
G P +Y II+ K K +E ++ LLDE S + D Y+ +I K
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS-PLKPDQKMYHMMIYMYKKA 267
Query: 209 GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY 268
G A K+ + M +G P +TYN L+ V K + ++Q I+PDV +Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSY 324
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+LI + R ++A +F+++L G T +AY ++++ + G+ ++A + M
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
PD +Y ++ A + + EK + + G N
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 425
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 151/319 (47%), Gaps = 10/319 (3%)
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVF 113
+ + LI + +G A +L+ +L +M V ++ L+++ + G A+ +F
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLS--VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV---KRGVSPDVQSYTIIINGL 170
M G +P+ ++Y ++ + + +A+++F ++ K + PD + Y ++I
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
K ++A K+ M + + T+ YNSL+ +S K+ ++M PDV
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDV 321
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD 290
++Y L+ ++ ++A+++ +E+ D G++P Y IL+D G ++ A+ +F+
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 291 ILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGE 350
+ + +YT M++ Y + A +++ G P+ VTY +I+ + +
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 351 NDKGEKLLREMVARGLLYN 369
+K ++ +M G+ N
Sbjct: 442 VEKMMEVYEKMRLSGIKAN 460
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V V Y +++ K VS YD +M I P+ V+Y LI + + ++A+
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ EM+ + +NIL+DA G V++AK VF M + + P+ SY++++ Y
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 401
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
++ A+ F + G P++ +Y +I G K V++ ++ ++M I A+
Sbjct: 402 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 461
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+++D + A EM G PPD N LL + +++A L
Sbjct: 462 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E S + ++R ++PDVV Y +I + + + +A ++ EM+ + P Y L+
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
F I G ++QA + M R+ ++ ++ ++ A +++ A+ F + G +
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PN V+Y +L+ GY +V K +++ M G+ + T I++ + K A
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Query: 183 LDEMHSEKIIADTICYNSLI 202
EM S + D N L+
Sbjct: 484 YKEMESCGVPPDQKAKNVLL 503
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 28/358 (7%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIP-PNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
+ +ID L K ++ L + M+ PN VT+ + + +Q+A+ +++
Sbjct: 84 FNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL 143
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAK----------NVFAVMMKQGVKPNTVSYSSL 131
+ E +N LVDALC+ +V EA+ N F+V NT ++ +
Sbjct: 144 DDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSV-------SNTKIHNLI 195
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+ G+ + K K+ + M GV+ D+ SY+I ++ +CK +A KL EM S ++
Sbjct: 196 LRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM 255
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
D + YN++I + + ++ EM RG P+V T+N ++ +LC+ + A
Sbjct: 256 KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYR 315
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI---FQDILIKGYNVTVQAYTVMIN 308
++ E+ +G +PD TY +C RL+ EI F ++ G + Y +++
Sbjct: 316 MLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ + G L + M+ SG PD+ Y +I AL +KG D + EM+ RGL
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 135/283 (47%), Gaps = 12/283 (4%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS------LIYGFCIVGQLQ 72
D + ++D+LC+ K V +A +L K + N + ++ ++ G+ +G
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEEL---CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWG 206
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+ +M + + ++ +++I +D +CK G +A ++ M + +K + V+Y++++
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
+ V +F M +RG P+V ++ II LC+ + +A+++LDEM
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
D+I Y L +L + S+ L M G P + TY L+ + + + +
Sbjct: 327 PDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYV 383
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
K +++ G PD Y +ID L + G L A+E ++++ +G
Sbjct: 384 WKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V D+ Y+ +D +CK A LY EM ++R+ + V Y ++I ++ +
Sbjct: 220 VTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGI 279
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ EM + + V T N ++ LC++G +++A + M K+G +P++++Y
Sbjct: 280 RVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------M 333
Query: 136 CLVKEVNKAKDI---FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
CL + K +I F M++ GV P + +Y +++ + + + M
Sbjct: 334 CLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDT 393
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
D+ YN++ID L + G + A + EM RG P
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
++ + +K DVV Y T+I ++ + V ++ EM + PN T+ ++I C G+
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
++ A +L+EM + + T+ L L K E ++F M++ GV+P +Y
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVM 366
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
LM + + ++ M + G +PD +Y +I+ L + M+D A + +EM
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEM-HHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
T +N +ID L K +W L+N M + + P+ +T+ + +H V +AI
Sbjct: 81 TETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAY 140
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF--QDILIKGYNVT-VQAYTVMINGY 310
++ D ++ + Y L+D LC+ + +A+E+ ++++ G++V+ + + +++ G+
Sbjct: 141 DKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGW 199
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
K G + KM++ G D +Y I + + + G+ K KL +EM +R +
Sbjct: 200 SKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM 255
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 3/360 (0%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R V DV Y+ I+ +L + KL S D+ MV + + P+ T + F V
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP-NTVSYS 129
+++A+ L E + +FN L+ LC+ +V AK+VF K+G P ++ SY+
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYN 259
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
++ G+ + EV + + + MV+ G PD SY+ +I GL + ++++ ++ D + +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
+ D YN++I ++ + M P++ TY+ L+ L K V A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ + +E+ +G+ P T + LC G A I+Q G ++ AY +++
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ G C L + +M+ SG D YE I+ L G + ++ E + +G N
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 5/345 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PD+ T +DS + V A +L+ E + + + ++ +L+ C + A
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAK 241
Query: 76 GLLNEMILKRMDVEVHT--FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
+ N K+ ++ + +NI++ K G V+E + V M++ G P+ +SYS L++
Sbjct: 242 SVFNA---KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
G +N + +IF+ + +G PD Y +I + DE+ + M E+
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ Y+ L+ GL K ++SDA ++ EM RG P L LC A+ +
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIY 418
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
++ + G + Y +L+ L + G+ ++ ++ GY V+ Y +++G C
Sbjct: 419 QKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCII 478
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
G + A+ ++ + G P+ Y + L + + KL
Sbjct: 479 GHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 150/313 (47%), Gaps = 40/313 (12%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR--IPPNAVTYTSLIYGFCIVGQLQQ 73
VK + ++ LC+ VS A +++ AK+ IP ++ +Y +I G+ +G++++
Sbjct: 217 VKCSTESFNALLRCLCERSHVSAAKSVFN---AKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
+L EM+ + +++ L++ L + G + ++ +F + +G P+ Y++++
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
+ ++ +++ + M+ P++++Y+ +++GL K + V +A ++ +EM S ++
Sbjct: 334 NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 194 DTICYNSLIDGLCKLG-----------------RISD-AWKLV----------------- 218
T S + LC G RIS+ A+KL+
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVW 453
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
+EM G P DV Y ++D LC +++ A+ +++E +G P+ F Y+ L L
Sbjct: 454 DEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMAS 513
Query: 279 GRLKDAQEIFQDI 291
+ + A ++F I
Sbjct: 514 NKTELAYKLFLKI 526
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD + Y+ +I+ L + ++D+ +++ + K P+A Y ++I F +++
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRY 347
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
M+ + + + T++ LV L K V +A +F M+ +GV P T +S + C
Sbjct: 348 YRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCS 407
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ A I+ K G +Y +++ L + + DEM +D
Sbjct: 408 YGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEV 467
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y ++DGLC +G + +A ++ E +G P+ Y+ L L S+ + A L +I+
Sbjct: 468 YEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIK 527
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 173/340 (50%), Gaps = 23/340 (6%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILK--RMDV--EVH 91
+ +A +++ ++ R P+A T +L+ ++ + +Q++ L+ E+++K RM V E
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALLL---VLVRKRQSLELVPEILVKACRMGVRLEES 180
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL- 150
TF IL+DALC+ G V A + M + V + YS L+ C K+ + I L
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 151 -MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
+ K SP ++ YT+++ L + E +L++M +++ D +CY ++ G+
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 210 RISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
A KL +E+ G PDV TYN ++ LCK ++++ A+ ++ + G +P+V TY
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY-------CKEGLCDEALAL 322
ILI L K G L A+ +++++ G N + +MI+ Y C GL +EA +
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM 420
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
++SS E +I L EKG D+ +LL +V
Sbjct: 421 NVFVKSS-------RIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 8/323 (2%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEM-ILKRMDVEVHTFNILVDALCKEGNVKEAKN 111
P Y +I QL+ +L + + ++ D F ++ A G ++EA
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 129
Query: 112 VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR---GVSPDVQSYTIIIN 168
VF + P+ + ++L+ LV++ + + ++VK GV + ++ I+I+
Sbjct: 130 VFFKIPNFRCVPSAYTLNALL--LVLVRKRQSLELVPEILVKACRMGVRLEESTFGILID 187
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS--DAWKLVNEMHHRGT 226
LC+I VD A +L+ M + +I D Y+ L+ +CK S D + ++
Sbjct: 188 ALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRF 247
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
P + Y ++ L + + ++++ +++ ++PD+ YTI++ G+ A +
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+F ++L+ G V Y V ING CK+ + AL ++S M G P+ VTY I+I+AL
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 347 EKGENDKGEKLLREMVARGLLYN 369
+ G+ + + L +EM G+ N
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRN 390
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 156/348 (44%), Gaps = 4/348 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYD-LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+P Y +I +L K + + LY V+++ + +I + G++++A+
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKE-AKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ ++ R +T N L+ L ++ E + + GV+ ++ L+D
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD--EAWKLLDEMHSEKII 192
C + EV+ A ++ M + V D + Y+ +++ +CK K + L+++ +
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
Y ++ L + GR + ++N+M PD++ Y +L + + KA L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
E+ G+ PDV+TY + I+GLCK ++ A ++ + G V Y ++I K
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
G A L +ME++G ++ T++I+I A E E LL E
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 110/214 (51%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE LR+ P + YT ++ L + + + ++M R+ P+ V YT ++ G
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+A L +E++L + +V+T+N+ ++ LCK+ +++ A + + M K G +PN V+
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ L+ ++++AK ++ M GV+ + ++ I+I+ ++ V A LL+E
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 188 SEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
+ + + +I LC+ G + A +L+ +
Sbjct: 419 NMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E + L ++ V+PD+V YT ++ + D+ A L+ E++ + P+ TY I
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G C ++ A+ +++ M + V T+NIL+ AL K G++ AK ++ M GV
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
N+ ++ ++ Y V EV A + V +I+ LC+ ++D+A +L
Sbjct: 389 RNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Query: 183 LDEM 186
L +
Sbjct: 449 LAHL 452
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 136/253 (53%), Gaps = 9/253 (3%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVA---KRIPPNAVTYTSLIYGFCIVGQ 70
++ PD +YTT++ K+ V+D + M + P+ VTYT+++ F G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 71 LQQAVGLLNEMILKRMDVEVH--TFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVS 127
+ +A +L EM RM V + T+N+L+ CK+ + A+++ M + G++P+ VS
Sbjct: 468 MDRARQVLAEMA--RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVS 525
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
Y+ ++DG L+ + A FN M RG++P SYT ++ A ++ DEM
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Query: 188 SE-KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
++ ++ D I +N L++G C+LG I DA ++V+ M G P+V TY L + + ++
Sbjct: 586 NDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKP 645
Query: 247 DKAIALIKEIQDQ 259
A+ L KEI+++
Sbjct: 646 GDALLLWKEIKER 658
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK---RGVSPDVQSYTIIINGLCKIKMVDEA 179
P++ Y++LM GY V + M + R PD +YT +++ ++D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM-HHRGTPPDVITYNPLLD 238
++L EM + A+ I YN L+ G CK +I A L+ EM G PDV++YN ++D
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY-N 297
+ A+A E++ +GI P +YT L+ G+ K A +F +++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
V + A+ +++ GYC+ GL ++A ++S+M+ +G P+ TY
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 28/335 (8%)
Query: 34 KLVSDAYDLYSE--MVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVH 91
KL+ ++ D E ++ K P++ YT+L+ G+ G++ +L E + ++ D H
Sbjct: 391 KLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARML-EAMRRQDDRNSH 449
Query: 92 ----TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
T+ +V A G + A+ V A M + GV N ++Y+ L+ GYC ++++A+D+
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 148 FNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
M + G+ PDV SY III+G I A +EM + I I Y +L+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 207 KLGRISDAWKLVNEM-HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
G+ A ++ +EM + D+I +N L++ C+ ++ A ++ +++ G P+V
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 266 FTYTILIDGLCKVGRLKDA----QEIFQDILIKGYNVTVQAYTVMINGYCK--EGLCD-- 317
TY L +G+ + + DA +EI + +K + + K EGL D
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689
Query: 318 -----------EALALISKMESSGRMPDAVTYEII 341
+AL +I+ ME +G P+ Y+ I
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 158/389 (40%), Gaps = 79/389 (20%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAY-DLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+PD + ++++ C + +D Y L+ EM P+ +TY +I VG+ + V
Sbjct: 233 RPDTAAFNAVLNA-CANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ---------------- 119
+L +I K + V + T + LV A G+++ A+ + M ++
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDL 351
Query: 120 -------GVKPNTVSYSSLMDGYCLVKEVNKAK--DIFNLMVKRGV-------------S 157
GY EV++ D+F ++ V +
Sbjct: 352 KEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFA 411
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE---KIIADTICYNSLIDGLCKLGRISDA 214
PD + YT ++ G K V + ++L+ M + D + Y +++ G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI-QDQGIKPDVFTYTILID 273
+++ EM G P + ITYN LL CK +D+A L++E+ +D GI+PDV +Y I+ID
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
G C ILI ALA ++M + G P
Sbjct: 532 G-C--------------ILIDD--------------------SAGALAFFNEMRTRGIAP 556
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMV 362
++Y +++A G+ ++ EM+
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 21/254 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYT 59
M L + R V + + Y ++ CK + A DL EM I P+ V+Y
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+I G ++ A+ NEM + + ++ L+ A G K A VF MM
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 120 G-VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
VK + ++++ L++GYC + + A+ + + M + G P+V +Y + NG+ + + +
Sbjct: 588 PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGD 647
Query: 179 A---WKLLDEMHSEK----------------IIADTICYNSLIDGLCKLGRISDAWKLVN 219
A WK + E + K + D ++L D + A +++
Sbjct: 648 ALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIA 707
Query: 220 EMHHRGTPPDVITY 233
M G PP+ Y
Sbjct: 708 CMEENGIPPNKTKY 721
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L NE L R+D ++ +L A K G A +V M++ G P+ ++++
Sbjct: 142 LRNERQLHRLDA--NSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAA----- 194
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +L P+ +S + I ++K + D+ + DT
Sbjct: 195 ----------VASLSASGDDGPE-ESIKLFIAITRRVK------RFGDQSLVGQSRPDTA 237
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+N++++ LG WKL EM PDV+TYN ++ + + + + +++ I
Sbjct: 238 AFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERI 297
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
D+GIK + T L+ G L+ A+ I Q
Sbjct: 298 IDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQ 330
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 145/313 (46%), Gaps = 3/313 (0%)
Query: 42 LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC 101
L+ EM + T+ +I + G A+ EM + TF L+ LC
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 102 -KEG-NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
K+G NV+EA F M++ G P+ + C V AK + + K G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PV 818
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
+Y+I I LC+I ++EA L E+ + D Y S++ GL + G + A VN
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
M GT P V Y L+ K ++K + ++++ + +P V TYT +I G +G
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
++++A F+++ +G + + Y+ IN C+ ++AL L+S+M G P + +
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFR 998
Query: 340 IIIRALFEKGEND 352
+ L +G++D
Sbjct: 999 TVFYGLNREGKHD 1011
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 164/350 (46%), Gaps = 2/350 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ +T +I K K + ++ +M +A Y +I CI G+ A+
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
EM+ K + + T+ +L+D + K V +++ M++ ++ L+ +C+
Sbjct: 283 KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ +A ++ + + + D + + I++ GLC+ + +A +++D M K+ D+ Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVY 401
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
+I G + +S A + + G PP V TY ++ L K +K L E+ +
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
GI+PD T ++ G R+ +A ++F + KG T ++Y++ + C+ DE
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
+ + ++M +S + + +I ++ + GE +K L++E+ R Y
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQKRSNSY 570
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 159/364 (43%), Gaps = 15/364 (4%)
Query: 13 RQLVKPDVVMYTT--IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI--- 67
++ ++ V +T +++ L K+ +A + V KR N + S Y I
Sbjct: 632 QEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKR---NGYKHNSEAYNMSIKVA 688
Query: 68 -VGQ-LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G+ +Q L EM + + T+ I++ + G A F M G+ P++
Sbjct: 689 GCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSS 748
Query: 126 VSYSSLMDGYCLVK--EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
++ L+ C K V +A F M++ G PD + + LC++ +A L
Sbjct: 749 STFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCL 808
Query: 184 DEMHSEKI-IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
D + KI T+ Y+ I LC++G++ +A + + D TY ++ L +
Sbjct: 809 DSLG--KIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ 866
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
++ KA+ + +++ G KP V YT LI K +L+ E Q + + +V
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
YT MI GY G +EA ME G PD TY I L + +++ KLL EM+
Sbjct: 927 YTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Query: 363 ARGL 366
+G+
Sbjct: 987 DKGI 990
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 115 VMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
V K G Y++++ + ++ ++ + M K G D++++TI+I+ K K
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
+ + + ++M D YN +I LC GR A + EM +G + TY
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 235 PLLDVLCKSHNVD-----------------------------------KAIALIKEIQDQ 259
LLD + KS VD +A+ LI+E++++
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK 358
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
+ D + IL+ GLC+ R+ DA EI DI+ + Y ++I+GY ++ +A
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKA 417
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
L ++ SGR P TY I++ LF+ + +KG L EM+ G+
Sbjct: 418 LEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 4 TSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
T E++R V PD + + LC+ DA + K P V Y+ I
Sbjct: 770 TRTFREMIRSGFV-PDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPVTVAYSIYIR 827
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP 123
C +G+L++A+ L +R ++ +T+ +V L + G++++A + M + G KP
Sbjct: 828 ALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKP 887
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
Y+SL+ + K++ K + M P V +YT +I G + V+EAW
Sbjct: 888 GVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAF 947
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
M D Y+ I+ LC+ + DA KL++EM +G P I + + L +
Sbjct: 948 RNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Query: 244 HNVDKA-IALIKE 255
D A IAL K+
Sbjct: 1008 GKHDLARIALQKK 1020
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 164/375 (43%), Gaps = 28/375 (7%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E++++ P V YT I+ L K K +L++EM+ I P++V T+++ G
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG 480
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
++ +A + + M K + +++I V LC+ E +F M +
Sbjct: 481 QNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI 540
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+S ++ E N K+ +L+ + + SY +NG K + E +L+D+ +
Sbjct: 541 FSWVISSM----EKNGEKEKIHLI--KEIQKRSNSYCDELNGSGKAEFSQEE-ELVDDYN 593
Query: 188 SEKIIADTICYNSL-------IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+++ + +L + +C++ S W+ E + T + + P L V
Sbjct: 594 CPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKST----VQFTPELVVE 649
Query: 241 CKSHNVDKAIALIKEIQDQGIK------PDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
H + A+++ G + + + +I + G K K + +F ++ +
Sbjct: 650 VLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGK--DFKQMRSLFYEMRRQ 707
Query: 295 GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE-KGEN-D 352
G +T + +MI Y + GL + A+ +M+ G +P + T++ +I L E KG N +
Sbjct: 708 GCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVE 767
Query: 353 KGEKLLREMVARGLL 367
+ + REM+ G +
Sbjct: 768 EATRTFREMIRSGFV 782
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 178/375 (47%), Gaps = 15/375 (4%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSL----CKDKLVSDAYDLYSEMVAKRIPP-------NAV 56
+ L+ ++ + T++++SL D DAY L+ + K I N
Sbjct: 175 IRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWD--LVKEIGEKESCGVLNLE 232
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
LI F +G+ + A + ++ T+ + ++ALCK + A +V M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK-M 175
+K GV +++ +C + +A ++ L + S + +I LCK
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+ A ++L ++ E ++ +I LC++ + DA L+ +M +G P +N
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++ K+ ++D+A ++K ++ +G+KPDV+TYT++I G K G + +AQEI + K
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG-ENDKG 354
++ Y +I GYCK DEAL L+++M+ G P+A Y +I++ K + +K
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 532
Query: 355 EKLLREMVARGLLYN 369
E L EM +GL N
Sbjct: 533 EVLFEEMKQKGLHLN 547
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+ E L+L+ + +KPDV YT II K ++ +A ++ +E K + VTY +
Sbjct: 423 LDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHA 482
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC-KEGNVKEAKNVFAVMMKQ 119
LI G+C + + +A+ LLNEM + +N L+ + C K + ++A+ +F M ++
Sbjct: 483 LIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
Query: 120 GVKPNTVS 127
G+ N +S
Sbjct: 543 GLHLNAIS 550
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 170/383 (44%), Gaps = 57/383 (14%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPP---NAVTYTSLIYGFCIVGQLQQAVGLLN 79
Y ++I L K + A+ L EM ++ P N+ T +I +C V + +A+ +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNV--------------------------------- 106
++++ + F L+ ALC+ NV
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIG 281
Query: 107 --KEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
+EA+ V+ M GVK + VSYSS++ Y +NK +F+ M K + PD + Y
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEK-IIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
+++ L K V EA L+ M EK I + + YNSLI LCK + +A ++ +EM
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
+G P + TY+ + +L V L+ +++ G +P V TY +LI LC+ +
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDN 458
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
++ ++ K + +Y VMI+G G +EA +M+ G P+ E +I+
Sbjct: 459 VLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE-NVEDMIQ 517
Query: 344 ALF------------EKGENDKG 354
+ F KGE +KG
Sbjct: 518 SWFSGKQYAEQRITDSKGEVNKG 540
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VK DVV Y+++I K ++ L+ M + I P+ Y ++++ + +A
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEAR 357
Query: 76 GLLNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L+ M ++ ++ V T+N L+ LCK +EAK VF M+++G+ P +Y + M
Sbjct: 358 NLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-- 415
Query: 135 YCLVKEVNKAKDIFNL---MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+ + +++F L M K G P V++Y ++I LC+ + D L DEM + +
Sbjct: 416 ----RILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD 229
D Y +I GL G+I +A+ EM +G P+
Sbjct: 472 GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
++G V+ Y +I+ L K++ D AW L+DEM K + +L+ + K +
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVH 211
Query: 213 DAWKLVNEMH---HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
D K +N H + + LL LC+ NV A LI +D+ D ++
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSFN 270
Query: 270 ILIDGLCKV-GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
I+++G C V G ++A+ ++ ++ G V +Y+ MI+ Y K G ++ L L +M+
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
PD Y ++ AL + + L++ M
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 9/270 (3%)
Query: 108 EAKNVFAVM--MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG------VSPD 159
E K VF + MK+ K +T SY+ + G+ +++ A +F M +R PD
Sbjct: 230 EFKRVFEKLKGMKR-FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPD 288
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
+ +Y +I+ LC +A + DE+ D Y LI G CK R+ DA ++
Sbjct: 289 ICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYG 348
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
EM + G PD I YN LLD K+ V +A L +++ +G++ +TY ILIDGL + G
Sbjct: 349 EMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
R + +F D+ KG V ++++ C+EG + A+ L+ +ME+ G D VT
Sbjct: 409 RAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 340 IIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ ++G D EKL++ + L+ N
Sbjct: 469 SLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 139/275 (50%), Gaps = 6/275 (2%)
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG------VKPNTVSYSSLMDGYC 136
+KR + ++NI + G++ A ++F M ++ P+ +Y+SL+ C
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
L + A +++ + G PD +Y I+I G CK +D+A ++ EM + DTI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
YN L+DG K ++++A +L +M G TYN L+D L ++ + L ++
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ +G D T++I+ LC+ G+L+ A ++ +++ +G++V + + ++ G+ K+G
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
D L+ + +P+ + + + A ++ ++
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQS 515
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 153/371 (41%), Gaps = 59/371 (15%)
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
+A Y+ + C G L + LL M ++++ IL+D+L + G + A V
Sbjct: 91 SATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVL 150
Query: 114 AVMMKQG---------------VK-----------------------------------P 123
M + G VK P
Sbjct: 151 DYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLP 210
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLM--VKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
TV+ + L+ G ++ K +F + +KR D SY I I+G +D A
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-FKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 182 LLDEMHSEKII------ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
L EM + D YNSLI LC G+ DA + +E+ G PD TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ CKS+ +D A+ + E+Q G PD Y L+DG K ++ +A ++F+ ++ +G
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
+ Y ++I+G + G + L ++ G+ DA+T+ I+ L +G+ +
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 356 KLLREMVARGL 366
KL+ EM RG
Sbjct: 450 KLVEEMETRGF 460
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%)
Query: 44 SEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKE 103
S + P+ TY SLI+ C+ G+ + A+ + +E+ + + + T+ IL+ CK
Sbjct: 278 SSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKS 337
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
+ +A ++ M G P+T+ Y+ L+DG ++V +A +F MV+ GV +Y
Sbjct: 338 YRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTY 397
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
I+I+GL + + + L ++ + D I ++ + LC+ G++ A KLV EM
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
RG D++T + LL K D L+K I++ + P+V + ++ K + KD
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 167/414 (40%), Gaps = 63/414 (15%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
PD ++Y ++D K + V++A L+ +MV + + + TY LI G G+ + L
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC- 136
++ K V+ TF+I+ LC+EG ++ A + M +G + V+ SSL+ G+
Sbjct: 417 FCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHK 476
Query: 137 ---------LVKEVNKAKDIFNLM---------VKRGVSPDVQSYTIIINGLCKI----- 173
L+K + + + N++ +KR S D + YT +
Sbjct: 477 QGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD-KDYTPMFPSKGSFLDIMS 535
Query: 174 ---------------KMVDEAWK-----------------LLDEMHSEKIIA-----DTI 196
M D+ W L +++ A D
Sbjct: 536 MVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVD 595
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRG-TPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
N+ + G +S A KL + G T TYN ++ K A ++ +
Sbjct: 596 MMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQ 655
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ + D+ TY ++I GL K+GR A + + +G + + Y +IN K
Sbjct: 656 MFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATR 715
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
DEA L M+S+G PD V+Y +I + G+ + K L+ M+ G L N
Sbjct: 716 LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 153/377 (40%), Gaps = 30/377 (7%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+PD Y +I CK + DA +Y EM P+ + Y L+ G ++ +A
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +M+ + + T+NIL+D L + G + +F + K+G + +++S + C
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
++ A + M RG S D+ + + ++ G K D KL+ + ++ + +
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVL 500
Query: 197 CYNSLIDGLCKL---------------GRISDAWKLVNEMHHRGTPPDV-------ITYN 234
+N+ ++ K G D +V + +V + +
Sbjct: 501 RWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSS 560
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC---KVGRLKDAQEIFQDI 291
P +D L N K + + Q KPD F ++ L G L A ++F+
Sbjct: 561 PYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFE-- 618
Query: 292 LIKGYNV---TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
+ G V T Y M++ + K+G A ++ +M + D TY +II+ L +
Sbjct: 619 IFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKM 678
Query: 349 GENDKGEKLLREMVARG 365
G D +L + +G
Sbjct: 679 GRADLASAVLDRLTKQG 695
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 89 EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP-NTVSYSSLMDGYCLVKEVNKAKDI 147
+V N + +G++ A +F + GV + +Y+S+M + A+ +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
+ M + + D+ +Y +II GL K+ D A +LD + + D + YN+LI+ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
R+ +A +L + M G PDV++YN +++V K+ + +A +K + D G P+ T
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 268 YTIL 271
TIL
Sbjct: 773 DTIL 776
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 2 GETSAALELLRRQLVK---------PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIP 52
G+ AAL L + + PD+ Y ++I LC DA ++ E+
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV 112
P+ TY LI G C ++ A+ + EM + +N L+D K V EA +
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 113 FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
F M+++GV+ + +Y+ L+DG +F + K+G D +++I+ LC+
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 173 IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
++ A KL++EM + D + +SL+ G K GR KL+ + P+V+
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 233 YN 234
+N
Sbjct: 502 WN 503
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 30/351 (8%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D + ++ + LC++ + A L EM + + VT +SL+ GF G+ L+
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLM 487
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKE--------AKNVFAVMMK-----------Q 119
+ + V +N V+A K K+ +K F +M +
Sbjct: 488 KHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAE 547
Query: 120 GVKP---NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI-IINGLCKIKM 175
V P + S S MD L + N+ K +F L + V S+ + ++N I +
Sbjct: 548 EVSPMEDDPWSSSPYMDQ--LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYL 605
Query: 176 VDEAWKL---LDEMHSEKIIAD--TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
L L E+ + + D + YNS++ K G A ++++M D+
Sbjct: 606 SKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD 290
TYN ++ L K D A A++ + QG D+ Y LI+ L K RL +A ++F
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 291 ILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ G N V +Y MI K G EA + M +G +P+ VT I+
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
D+ +T+N ++ + K+G + A+ V M + + +Y+ ++ G + + A
Sbjct: 627 DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASA 686
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+ + + K+G D+ Y +IN L K +DEA +L D M S I D + YN++I+
Sbjct: 687 VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
K G++ +A+K + M G P+ +T + +LD L K
Sbjct: 747 KAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 57/307 (18%)
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
++ G K + +YS + C + + D+ M + GV+ D I+++ L +
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 177 DEAWKLLDEM-----------------------------------------HSE------ 189
+ A +LD M HS+
Sbjct: 144 ESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 190 ---KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH-RGTPPDVITYNPLLDVLCKSHN 245
+ T+ N L+ GL + S+ ++ ++ + D +YN + +
Sbjct: 204 IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGD 263
Query: 246 VDKAIALIKEIQDQ------GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+D A++L KE++++ PD+ TY LI LC G+ KDA ++ ++ + G+
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
Y ++I G CK D+A+ + +M+ +G +PD + Y ++ + + + +L
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 360 EMVARGL 366
+MV G+
Sbjct: 384 KMVQEGV 390
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 167/356 (46%), Gaps = 12/356 (3%)
Query: 2 GETSAALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
E AA + R+ V + ++ LC+ A ++ EM + P+ +
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMIL----KRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
Y L+ GFC+ G+L++A LL M K ++ + IL+DALC G V +A +
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKE--VNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
++++G+K Y + G+ + + K + + RG P + SY+ + L
Sbjct: 250 GKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN-EMHHRGTPPDV 230
+ + E ++L M S+ Y + + LC+ G++ +A ++N EM P V
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
YN L+ LC +A+ +K++ Q + TY L+DGLC+ G+ +A ++ +
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 290 DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
++LIK + V+ Y +MI G C EA+ + +M S +P++ ++ + ++
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 44/388 (11%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG----- 76
+Y T+ID L K V + + M + S+I F G+L+ A+
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 77 --------------LLNEMILK-RMDVEVHTF----------------NILVDALCKEGN 105
LL EM+ + ++ H F N+L+ LC+
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK----DIFNLMVKRGVSPDVQ 161
A VF M QG P+ SY LM G+CL ++ +A +F + ++G D+
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR--ISDAWKLVN 219
Y I+++ LC VD+A ++L ++ + + A CY+ + G + I +L+
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
E RG P + +Y+ + L + + + ++ ++ +G +P F Y + LC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 280 RLKDAQEIFQDILIKGYNV-TVQAYTVMINGYCKEGLCDEALALISKMESS-GRMPDAVT 337
+LK+A + +++G+ + TV Y V+I G C +G EA+ + KM + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARG 365
Y+ ++ L G+ + +++ EM+ +
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 169/390 (43%), Gaps = 44/390 (11%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
++ ++I + + + DA L+ + ++++ +L+ +L+ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 82 ILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
++ + N+L+ LC+ A VF M QG P+ SY LM G+CL +
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 141 VNKAK----DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +A +F + ++G D+ Y I+++ LC VD+A ++L ++ + + A
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 197 CYNSLIDGLCKLGR--ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
CY+ + G + I +L+ E RG P + +Y+ + L + + + ++
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG--------YNVTV------ 300
++ +G +P F Y + LC+ G+LK+A + +++G YNV +
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 301 -----------------------QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
+ Y +++G C++G EA ++ +M P T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGLL 367
Y ++I+ L + + L EMV++ ++
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ--LQQAVG 76
D+V+Y ++D+LC V DA ++ +++ K + Y + G +++
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL E +++ + +++ + L +EG + E + V M +G +P Y + + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 137 LVKEVNKAKDIFNLMVKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIAD 194
++ +A + N + +G P V Y ++I GLC EA L +M + +A+
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
Y +L+DGLC+ G+ +A +++ EM + P V TY+ ++ LC +A+ ++
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 255 EIQDQGIKPDVFTYTILIDGLC 276
E+ Q + P+ + L + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 4 TSAALELLRRQLVK-------PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV 56
+S +E ++R L + P + Y+ + L ++ + + ++ M +K P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 57 TYTSLIYGFCIVGQLQQAVGLLN-EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
Y + + C G+L++AV ++N EM+ V +N+L+ LC +G EA
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 116 MMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
M KQ N +Y +L+DG C + +A + M+ + P V++Y ++I GLC +
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMD 454
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
EA L+EM S+ ++ ++ + +L + +C
Sbjct: 455 RRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 167/356 (46%), Gaps = 12/356 (3%)
Query: 2 GETSAALELLRRQL----VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
E AA + R+ V + ++ LC+ A ++ EM + P+ +
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMIL----KRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
Y L+ GFC+ G+L++A LL M K ++ + IL+DALC G V +A +
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKE--VNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
++++G+K Y + G+ + + K + + RG P + SY+ + L
Sbjct: 250 GKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN-EMHHRGTPPDV 230
+ + E ++L M S+ Y + + LC+ G++ +A ++N EM P V
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
YN L+ LC +A+ +K++ Q + TY L+DGLC+ G+ +A ++ +
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 290 DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
++LIK + V+ Y +MI G C EA+ + +M S +P++ ++ + ++
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 44/388 (11%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG----- 76
+Y T+ID L K V + + M + S+I F G+L+ A+
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 77 --------------LLNEMILK-RMDVEVHTF----------------NILVDALCKEGN 105
LL EM+ + ++ H F N+L+ LC+
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK----DIFNLMVKRGVSPDVQ 161
A VF M QG P+ SY LM G+CL ++ +A +F + ++G D+
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR--ISDAWKLVN 219
Y I+++ LC VD+A ++L ++ + + A CY+ + G + I +L+
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
E RG P + +Y+ + L + + + ++ ++ +G +P F Y + LC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 280 RLKDAQEIFQDILIKGYNV-TVQAYTVMINGYCKEGLCDEALALISKMESS-GRMPDAVT 337
+LK+A + +++G+ + TV Y V+I G C +G EA+ + KM + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARG 365
Y+ ++ L G+ + +++ EM+ +
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 169/390 (43%), Gaps = 44/390 (11%)
Query: 22 MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM 81
++ ++I + + + DA L+ + ++++ +L+ +L+ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 82 ILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
++ + N+L+ LC+ A VF M QG P+ SY LM G+CL +
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 141 VNKAK----DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+ +A +F + ++G D+ Y I+++ LC VD+A ++L ++ + + A
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 197 CYNSLIDGLCKLGR--ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
CY+ + G + I +L+ E RG P + +Y+ + L + + + ++
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG--------YNVTV------ 300
++ +G +P F Y + LC+ G+LK+A + +++G YNV +
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 301 -----------------------QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
+ Y +++G C++G EA ++ +M P T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 338 YEIIIRALFEKGENDKGEKLLREMVARGLL 367
Y ++I+ L + + L EMV++ ++
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ--LQQAVG 76
D+V+Y ++D+LC V DA ++ +++ K + Y + G +++
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL E +++ + +++ + L +EG + E + V M +G +P Y + + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 137 LVKEVNKAKDIFNLMVKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIAD 194
++ +A + N + +G P V Y ++I GLC EA L +M + +A+
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
Y +L+DGLC+ G+ +A +++ EM + P V TY+ ++ LC +A+ ++
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 255 EIQDQGIKPDVFTYTILIDGLC 276
E+ Q + P+ + L + +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 4 TSAALELLRRQLVK-------PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAV 56
+S +E ++R L + P + Y+ + L ++ + + ++ M +K P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 57 TYTSLIYGFCIVGQLQQAVGLLN-EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
Y + + C G+L++AV ++N EM+ V +N+L+ LC +G EA
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 116 MMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
M KQ N +Y +L+DG C + +A + M+ + P V++Y ++I GLC +
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMD 454
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
EA L+EM S+ ++ ++ + +L + +C
Sbjct: 455 RRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 90/142 (63%)
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M++ + P T++Y+S++DG+C V+ AK + + M +G SPDV +++ +ING CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
VD ++ EMH I+A+T+ Y +LI G C++G + A L+NEM G PD IT++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 236 LLDVLCKSHNVDKAIALIKEIQ 257
+L LC + KA A+++++Q
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 79/139 (56%)
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I TI YNS+IDG CK R+ DA ++++ M +G PDV+T++ L++ CK+ VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ E+ +GI + TYT LI G C+VG L AQ++ +++ G + M+ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 311 CKEGLCDEALALISKMESS 329
C + +A A++ ++ S
Sbjct: 126 CSKKELRKAFAILEDLQKS 144
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 85/145 (58%)
Query: 46 MVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN 105
M+ I P +TY S+I GFC ++ A +L+ M K +V TF+ L++ CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI 165
V +F M ++G+ NTV+Y++L+ G+C V +++ A+D+ N M+ GV+PD ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEK 190
++ GLC K + +A+ +L+++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%)
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
M++ + P +Y +I+G CK VD+A ++LD M S+ D + +++LI+G CK R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+ + ++ EMH RG + +TY L+ C+ ++D A L+ E+ G+ PD T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 271 LIDGLCKVGRLKDAQEIFQDI 291
++ GLC L+ A I +D+
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
T+N ++D CK+ V +AK + M +G P+ V++S+L++GYC K V+ +IF M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
+RG+ + +YT +I+G C++ +D A LL+EM S + D I ++ ++ GLC +
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 212 SDAWKLVNEM-----HH 223
A+ ++ ++ HH
Sbjct: 132 RKAFAILEDLQKSEDHH 148
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%)
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
P ITYN ++D CK VD A ++ + +G PDV T++ LI+G CK R+ + EI
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
F ++ +G YT +I+G+C+ G D A L+++M S G PD +T+ ++ L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 348 KGENDKGEKLLREM 361
K E K +L ++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R + P + Y ++ID CK V DA + M +K P+ VT+++LI G+C ++
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+ + EM + + T+ L+ C+ G++ A+++ M+ GV P+ +++ ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 133 DGYCLVKEVNKA 144
G C KE+ KA
Sbjct: 123 AGLCSKKELRKA 134
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ + + PDVV ++T+I+ CK K V + +++ EM + I N VTYT+LI+GFC
Sbjct: 33 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 92
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
VG L A LLNEMI + + TF+ ++ LC + KE + FA++
Sbjct: 93 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK---KELRKAFAIL 138
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
I P TY +IDG CK R+ DA+ + + KG + V ++ +INGYCK D +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ +M G + + VTY +I + G+ D + LL EM++ G+
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
T Y MI+G+CK+ D+A ++ M S G PD VT+ +I + D G ++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 359 REMVARGLLYN 369
EM RG++ N
Sbjct: 69 CEMHRRGIVAN 79
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 184/399 (46%), Gaps = 42/399 (10%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+GE ++ ++ ++ PD Y +I K+ + A + EM + P+ V+Y +
Sbjct: 349 LGEVTSLMKTMKLHCA-PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 61 LIYGFCIVGQLQQAVGLLNEM-------------ILKRMDVEVHT--------------- 92
L+Y F I +++A GL+ EM L RM VE
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG 467
Query: 93 ------FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
++ +DA + G + EA+ VF + ++ K + Y+ ++ Y + K KA +
Sbjct: 468 NMSSEGYSANIDAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACE 526
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+F M+ GV+PD +Y ++ L M + L++M ++D I Y ++I
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
KLG+++ A ++ EM PDV+ Y L++ + NV +A++ ++ +++ GI +
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV 646
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT----VQAYTVMINGYCKEGLCDEALAL 322
Y LI KVG L +A+ I++ L++ N T V MIN Y + + +A A+
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRK-LLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAI 705
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
M+ G + T+ +++ + G ++ ++ ++M
Sbjct: 706 FDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 167/374 (44%), Gaps = 36/374 (9%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y T+ID+ K + +A + + M+ + I P VT+ ++I+ + GQL + L+ M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
L + T+NIL+ K +++ A F M G+KP+ VSY +L+ + + V
Sbjct: 361 L-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+A+ + M V D + + + + +M++++W H ++ Y++ I
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANI 478
Query: 203 DGLCKLGRISDAWK----------------------------------LVNEMHHRGTPP 228
D + G +S+A + L M G P
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
D TYN L+ +L + K ++++++ G D Y +I K+G+L A+E++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 289 QDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEK 348
++++ V Y V+IN + G +A++ + M+ +G ++V Y +I+ +
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 349 GENDKGEKLLREMV 362
G D+ E + R+++
Sbjct: 659 GYLDEAEAIYRKLL 672
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 15/364 (4%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R+ +KP Y T+ID K L A +M + P+ VT ++ + + Q
Sbjct: 215 RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQ 274
Query: 73 QAVGLLNEMILKRMDVEVH------TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
+A + + H T+N ++D K G +KEA F M+++G+ P TV
Sbjct: 275 KAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
++++++ Y ++ + + M K +PD ++Y I+I+ K ++ A EM
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ + D + Y +L+ + +A L+ EM D T + L + ++ +
Sbjct: 394 KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEML 453
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF---QDILIKGYNVTVQAY 303
+K+ + K G Y+ ID + G L +A+ +F Q++ + TV Y
Sbjct: 454 EKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEY 508
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
VMI Y C++A L M S G PD TY +++ L KG L +M
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 364 RGLL 367
G +
Sbjct: 569 TGYV 572
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 168/353 (47%), Gaps = 13/353 (3%)
Query: 23 YTTIIDSLCKDKLVSDAYDLY--SEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNE 80
Y+ ID+ + +S+A ++ + V KR + Y +I + I ++A L
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFES 530
Query: 81 MILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
M+ + + T+N LV L + + M + G + + Y +++ + + +
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
+N A++++ MV+ + PDV Y ++IN V +A ++ M I +++ YNS
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 201 LIDGLCKLGRISDA---WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
LI K+G + +A ++ + + ++ PDV T N ++++ + V KA A+ ++
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+G + + FT+ +++ K GR ++A +I + + +Y ++ + +G
Sbjct: 711 QRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFK 769
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG----EKLLREMVARGL 366
EA+ +M SSG PD T++ + L + G + K E++ ++ + RGL
Sbjct: 770 EAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGL 822
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
LE +R D + Y +I S K ++ A ++Y EMV I P+ V Y LI F
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK---PN 124
G +QQA+ + M + +N L+ K G + EA+ ++ +++ K P+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+ + +++ Y V KA+ IF+ M +RG + + ++ +++ K +EA ++
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAK 741
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
+M KI+ D + YNS++ GR +A + EM G PD T+ L +L K
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
KA+ I+EI+ + IK + + + L +G
Sbjct: 802 MSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V PD Y T++ L + +M + + Y ++I F +GQL A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ EM+ ++ +V + +L++A GNV++A + M + G+ N+V Y+SL+ Y
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 136 CLVKEVNKAKDIFNLMVK---RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
V +++A+ I+ +++ + PDV + +IN + MV +A + D M ++
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGE 714
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
A+ + ++ K GR +A ++ +M D ++YN +L + +A+
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
KE+ GI+PD T+ L L K+G K A ++I K
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 12/290 (4%)
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +EMI K + T+ L+D K G A M K G++P+ V+ ++ Y
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 137 LVKEVNKAKDIFNLM------VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
+E KA++ F V +Y +I+ K + EA + M E
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I+ T+ +N++I G++ + L+ M PD TYN L+ + K++++++A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAG 387
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT--VMIN 308
A KE++D G+KPD +Y L+ +++A+ + + + NV + YT +
Sbjct: 388 AYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAE--MDDDNVEIDEYTQSALTR 445
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
Y + + +++ + + +G M + Y I A E+G + E++
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNM-SSEGYSANIDAYGERGYLSEAERVF 494
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
++ V +NI++ L K + ++++ M+++G+KP +Y +L+D Y A
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 243
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT-IC-----YNS 200
M K G+ PD + I++ K + +A + + ++ AD+ +C YN+
Sbjct: 244 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
+ID K G+I +A + M G P +T+N ++ + + + + +L+K ++
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH- 362
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
PD TY ILI K ++ A F+++ G +Y ++ + + +EA
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFE 347
LI++M+ D T + R E
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVE 449
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ I YN ++ L K + L +EM +G P TY L+DV K A+ +
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ----DILIKGYNVTVQAYT--VMI 307
++ G++PD T I++ K + A+E F+ D +V + +YT MI
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ Y K G EA +M G +P VT+ +I G+ + L++ M
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 179/402 (44%), Gaps = 46/402 (11%)
Query: 1 MGETSAALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
M + LEL R+ + ++ + +I+ S K V DA L EM + P+ VT
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ SL+ G+ G + A+ +L M + + + + L+ A+ + G++K K + ++
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ + + ++L+D Y + A+ +F++M + ++ ++ +++GL ++
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLK 308
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A L+ M E I D I +NSL G LG+ A ++ +M +G P+V+++ +
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKP---------------------------------- 263
K+ N A+ + ++Q++G+ P
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 264 -DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
D + T L+D K G L+ A EIF I N ++ ++ M+ GY G +E +A
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGI----KNKSLASWNCMLMGYAMFGRGEEGIAA 484
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
S M +G PDA+T+ ++ G +G K M +R
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 8/301 (2%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G ++AV L EM T L+ + E + + +++ G++ N
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+SL+ Y ++ ++ +FN M R +S S+ I++ K+ VD+A LLDEM
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ D + +NSL+ G G DA ++ M G P + + LL + + ++
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A+ I + DV+ T LID K G L A+ +F + K + A+ +++
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVS 299
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
G L +A AL+ +ME G PDA+T+ + G+ +K ++ +M +G+
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 369 N 369
N
Sbjct: 360 N 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 64/376 (17%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+ ++ +KPD + + ++ A D+ +M K + PN V++T++ G G
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 71 LQQAVGLLNEM--------------ILKRMDV--------EVHTF-------------NI 95
+ A+ + +M +LK + EVH F
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTV-SYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
LVD K G+++ A +F G+K ++ S++ ++ GY + + F++M++
Sbjct: 437 LVDMYGKSGDLQSAIEIF-----WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEA 491
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS-LIDGLCKLGRISD 213
G+ PD ++T +++ +V E WK D M S I TI + S ++D L + G + +
Sbjct: 492 GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP-DVFTYTILI 272
AW + M + PD + L CK H D +A I + Q ++P + Y ++I
Sbjct: 552 AWDFIQTMSLK---PDATIWGAFLSS-CKIHR-DLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI------NGYCKEGLCD--------E 318
+ + R +D + I L++ V VQ I + + EG E
Sbjct: 607 NLYSNLNRWEDVERIRN--LMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFE 664
Query: 319 ALALISKMESSGRMPD 334
L+S+M+ SG +PD
Sbjct: 665 LYKLVSEMKKSGYVPD 680
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 123/309 (39%), Gaps = 82/309 (26%)
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
YG C+ L A L +EM KR D+ +N +V + GN ++A +F M G
Sbjct: 32 FYGRCV--SLGFANKLFDEMP-KRDDL---AWNEIVMVNLRSGNWEKAVELFREMQFSGA 85
Query: 122 KPNTVSYSSLMDGYCLVKE-VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
K + L+ C KE + + I +++ G+ +V
Sbjct: 86 KAYDSTMVKLLQ-VCSNKEGFAEGRQIHGYVLRLGLESNV-------------------- 124
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++C NSLI + G++ + K+ N M R ++ ++N +L
Sbjct: 125 --------------SMC-NSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSY 165
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K VD AI L+ E++ G+KPD+ T
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVT--------------------------------- 192
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+ +++GY +GL +A+A++ +M+ +G P + +++A+ E G G+ +
Sbjct: 193 --WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 361 MVARGLLYN 369
++ L Y+
Sbjct: 251 ILRNQLWYD 259
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 185/422 (43%), Gaps = 66/422 (15%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G S+ + + + K D + + +I++ + + DA +M + P TY +L
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEV----HTFNILVDALCKEGNVKEAKNVFAVMM 117
I G+ I G+ +++ LL+ ++L+ +V+V TFN+LV A CK+ V+EA V M
Sbjct: 157 IKGYGIAGKPERSSELLD-LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKD--IFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+ GV+P+TV+Y+++ Y E +A+ + +++K P+ ++ I++ G C+
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCK---------------LGRISDAWKLVNE 220
V + + + M ++ A+ + +NSLI+G + L ++ +LV
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGN 335
Query: 221 ----------MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
M DVITY+ +++ + ++KA + KE+ G+KPD Y+I
Sbjct: 336 QKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 395
Query: 271 L----------------------------------IDGLCKVGRLKDAQEIFQDILIKGY 296
L I G C G + DA +F + G
Sbjct: 396 LAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 455
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEK 356
+ ++ + ++ GY + +A ++ M G P+ T+ ++ A G D+ K
Sbjct: 456 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 515
Query: 357 LL 358
+
Sbjct: 516 AI 517
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 191/447 (42%), Gaps = 109/447 (24%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
T +++ L + +A ++ + P+ ++YT+L+ + Q +++E+
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
++ FN +++A + GN+++A M + G+ P T +Y++L+ GY + + +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 144 AKDIFNLMVKRG---VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
+ ++ +LM++ G V P+++++ +++ CK K V+EAW+++ +M + DT+ YN+
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 201 L-------------------------------------IDGLCKLGRISDAWKLVNEMHH 223
+ + G C+ GR+ D + V M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 224 RGTPPDVITYNPL-----------------LDVLCKSHNVD-----------KAIALIKE 255
+++ +N L L +L S N + + + L+KE
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQD--------------ILIKGY----- 296
+K DV TY+ +++ G ++ A ++F++ IL KGY
Sbjct: 349 CN---VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 297 -----------------NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
NV + +T +I+G+C G D+A+ + +KM G P+ T+E
Sbjct: 406 PKKAEELLETLIVESRPNVVI--FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 463
Query: 340 IIIRALFEKGENDKGEKLLREMVARGL 366
++ E + K E++L+ M G+
Sbjct: 464 TLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L++ VK DV+ Y+T++++ + A ++ EMV + P+A Y+ L G+
Sbjct: 343 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 402
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ ++A LL +I++ V F ++ C G++ +A VF M K GV PN +
Sbjct: 403 AKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ +LM GY VK+ KA+++ +M GV P+ ++ ++ + DE+ K ++ +
Sbjct: 462 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Query: 188 SEKI 191
+ I
Sbjct: 522 CKDI 525
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 158/331 (47%), Gaps = 2/331 (0%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L L++ + D +YTT+I S K V ++++ +M + N T+ +LI G
Sbjct: 490 LRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR 549
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG--VKPNT 125
GQ+ +A G + K + + FN L+ A + G V A +V A M + + P+
Sbjct: 550 AGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH 609
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
+S +LM C +V +AK+++ ++ K G+ + YTI +N K D A + +
Sbjct: 610 ISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKD 669
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M + + D + +++LID + +A+ ++ + +G I+Y+ L+ C + +
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
KA+ L ++I+ ++P + T LI LC+ +L A E +I G Y++
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAV 336
++ ++ + + L+S+ + G P+ +
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 176/399 (44%), Gaps = 43/399 (10%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+L +R L+ D + + + + K + V +A+ +++++ + P T+ +++ C
Sbjct: 425 DLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLI---LNPTMSTF-NMLMSVCAS 479
Query: 69 GQ-LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
Q ++ A G+L + M + + L+ + K G V VF M GV+ N +
Sbjct: 480 SQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHT 539
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
+ +L+DG +V KA + ++ + V PD + +I+ + VD A+ +L EM
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 188 SE--KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH---RGTP--------------- 227
+E I D I +L+ C G++ A ++ +H RGTP
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Query: 228 -----------------PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
PD + ++ L+DV + +D+A ++++ + QGI+ +Y+
Sbjct: 660 WDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSS 719
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
L+ C K A E+++ I T+ +I C+ +A+ + ++++ G
Sbjct: 720 LMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLG 779
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
P+ +TY +++ A K + + KLL + G+ N
Sbjct: 780 LKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 140/296 (47%), Gaps = 11/296 (3%)
Query: 50 RIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM-DVEVHTFNILVDALCKEGNVKE 108
R P + Y L+ G+++ + LL ++ + + D++ A K+ VKE
Sbjct: 399 RSPETSDAYNRLLRD----GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKE 454
Query: 109 AKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIIN 168
A +++ P +++ LM +++ A+ + L+ + G++ D + YT +I+
Sbjct: 455 AFRFTKLILN----PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLIS 510
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
K VD +++ +M + + A+ + +LIDG + G+++ A+ + + P
Sbjct: 511 SCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKP 570
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEI--QDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
D + +N L+ +S VD+A ++ E+ + I PD + L+ C G+++ A+E
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE 630
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
++Q I G T + YT+ +N K G D A ++ M+ PD V + +I
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII-ADTICYNSLIDGLC 206
F L G SP+ N L + + + LL+++ ++ D I + S
Sbjct: 391 FELHNSNGRSPETSD---AYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACK 447
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K + +A++ + + P + T+N L+ V S +++ A +++ +Q+ G+ D
Sbjct: 448 KQRAVKEAFRFTKLILN----PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
YT LI K G++ E+F + G + + +I+G + G +A +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
S PD V + +I A + G D+ +L EM A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKA 600
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%)
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
D+ + +N ++ L K ++ A F + G K +T +Y++LM + KA +
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
I+ M K D +Y +II L K +D A+KL +M K+ ++SL+D +
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K GR+ + K+ EM G P + L+D K+ +D A+ L E++ G +P+
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
YT++I+ K G+L+ A +F+D+ G+ T Y+ ++ + G D A+ + + M
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
++G P +Y ++ L K D K+L EM A G
Sbjct: 480 TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 9/344 (2%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
Y +I L K + + A+ + + + TY +L+ F G +A + M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
++ T+ +++ +L K G + A +F M ++ ++P+ +SSL+D ++
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+ ++ M G P + +I+ K +D A +L DEM + Y +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
+ K G++ A + +M G P TY+ LL++ S VD A+ + + + G++
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P + +Y L+ L + A +I ++ GY+V V A V++ Y K+ D AL
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKW 544
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEK----GENDKGEKLLREMV 362
+ M SSG T IIR LFE G D LL +V
Sbjct: 545 LRFMGSSG----IKTNNFIIRQLFESCMKNGLYDSARPLLETLV 584
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
F + G D Q+Y ++ + +A+++ + M + D Y +I L K
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
GR+ A+KL +M R P ++ L+D + K+ +D ++ + E+Q G +P
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
+ LID K G+L A ++ ++ G+ YT++I + K G + A+ + ME
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 328 SSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+G +P TY ++ G+ D K+ M GL
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 144/350 (41%), Gaps = 17/350 (4%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
K D Y ++ L A+++Y M + TY +I G+L A
Sbjct: 275 KIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFK 334
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +M +++ F+ LVD++ K G + + V+ M G +P+ + SL+D Y
Sbjct: 335 LFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA 394
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
+++ A +++ M K G P+ YT+II K ++ A + +M +
Sbjct: 395 KAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPS 454
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
Y+ L++ G++ A K+ N M + G P + +Y LL +L VD A ++ E+
Sbjct: 455 TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 257 QDQGIKPDVFTYTIL--------IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
+ G DV +L +D K R + IK N ++ +
Sbjct: 515 KAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSG------IKTNNFIIRQ---LFE 565
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
K GL D A L+ + S D V Y I+ L + DK +L+
Sbjct: 566 SCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLM 615
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G AA +L ++ + ++P ++++++DS+ K + + +Y EM P+A +
Sbjct: 327 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SLI + G+L A+ L +EM + +++++ K G ++ A VF M K
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G P +YS L++ + +V+ A I+N M G+ P + SY ++ L ++VD
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDV 506
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A K+L EM + D +C + ++ K + A K + M G + L +
Sbjct: 507 AGKILLEMKAMGYSVD-VCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFE 565
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCK 277
K+ D A L++ + K D+ YT ++ L +
Sbjct: 566 SCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSP---DVQSYTIIINGLCKIKMVDEA 179
P+ Y L DG ++ + +F MV+ S +Y +I L K + ++ A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+ + DT YN+L+ G A+++ M + D TY ++
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
L KS +D A L ++++++ ++P ++ L+D + K GRL + +++ ++ G+ +
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ +I+ Y K G D AL L +M+ SG P+ Y +II + + G+ + + +
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 360 EMVARGLL 367
+M G L
Sbjct: 443 DMEKAGFL 450
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 137 LVKEVNKAKDIFNLMVKRGVS-PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+VKEV+ A +F K+ P + Y ++ +GL + + L +EM +
Sbjct: 181 IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGD 240
Query: 196 I---CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+ YN +I L K ++ A+ + G D TYN L+ + KA +
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+ ++ D TY ++I L K GRL A ++FQ + + + ++ +++ K
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
G D ++ + +M+ G P A + +I + + G+ D +L EM G N
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 168/361 (46%), Gaps = 45/361 (12%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
GE A + RR + + DV+ + +++ + C++ +A +L EM + I P VT+ L
Sbjct: 230 GELDFATKFFRR-MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G+ +G+ A+ L+ +M + +V T+ ++ L G +A ++F M GV
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
PN V+ S + +K +N+ ++ ++ VK G DV +++ K +++A K
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 182 LLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC 241
+ D + ++ D +NS+I G C+ G A++L M P++IT+N ++
Sbjct: 409 VFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 242 KSHNVDKAIALIKEIQDQG-IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K+ + +A+ L + ++ G ++ + T+ ++I G
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG-------------------------- 498
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
Y + G DEAL L KM+ S MP++VT I +L N G K++RE
Sbjct: 499 ---------YIQNGKKDEALELFRKMQFSRFMPNSVT----ILSLLPACANLLGAKMVRE 545
Query: 361 M 361
+
Sbjct: 546 I 546
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 164/360 (45%), Gaps = 9/360 (2%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E + L+ + V PD ++ I+ V ++S ++ + S++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+ G+L A M + +V +N ++ A C+ G +EA + M K+G+
Sbjct: 224 AVYAKCGELDFATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P V+++ L+ GY + + + A D+ M G++ DV ++T +I+GL M +A +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
+M ++ + + S + L I+ ++ + G DV+ N L+D+ K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
++ A + ++++ DV+T+ +I G C+ G A E+F + +
Sbjct: 400 CGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMP-DAVTYEIIIRALFEKGENDKGEKLLREM 361
+ MI+GY K G EA+ L +ME G++ + T+ +II + G+ D+ +L R+M
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 155/348 (44%), Gaps = 10/348 (2%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
++ ++ +I + ++ + L+ M+ + P+ + ++ G G ++ +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ +I M + N ++ K G + A F M ++ V ++++S++ YC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQN 260
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ +A ++ M K G+SP + ++ I+I G ++ D A L+ +M + I AD +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ- 257
++I GL G A + +M G P+ +T + C V + + I
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA-CSCLKVINQGSEVHSIAV 379
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
G DV L+D K G+L+DA+++F + N V + MI GYC+ G C
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCG 435
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+A L ++M+ + P+ +T+ +I + G+ + L + M G
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 29/321 (9%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI-----YGFCIVGQLQQA-VGLLNE 80
D LC++ + +A + + TY L+ G +G++ A GL E
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE 112
Query: 81 MILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKE 140
DV V T + + A C G + +A+ VF M ++ N ++S+++ Y
Sbjct: 113 P-----DVFVETKLLSMYAKC--GCIADARKVFDSMRER----NLFTWSAMIGAYSRENR 161
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI-IADTICY- 198
+ +F LM+K GV PD + I+ G V EA K++ HS I + + C
Sbjct: 162 WREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV-EAGKVI---HSVVIKLGMSSCLR 217
Query: 199 --NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
NS++ K G + A K M R DVI +N +L C++ ++A+ L+KE+
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ +GI P + T+ ILI G ++G+ A ++ Q + G V +T MI+G G+
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 317 DEALALISKMESSGRMPDAVT 337
+AL + KM +G +P+AVT
Sbjct: 334 YQALDMFRKMFLAGVVPNAVT 354
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 172/401 (42%), Gaps = 69/401 (17%)
Query: 1 MGETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVT 57
+G+ AA++L+++ + DV +T +I L + + A D++ +M + PNAVT
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 58 YTSLIYGFCIVGQLQQA---------VGLLNEMILKRMDVE------------------- 89
S + + + Q +G ++++++ V+
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Query: 90 ---VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
V+T+N ++ C+ G +A +F M ++PN +++++++ GY + +A D
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 147 IFNLMVKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+F M K G V + ++ +II G + DEA +L +M + + +++ SL+
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Query: 206 --------------CKLGR-----------ISDAWKLVNEMHHRGT------PPDVITYN 234
C L R ++D + ++ + T D+IT+N
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWN 594
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
L+ + A+AL +++ QGI P+ T + +I +G + + +++F I
Sbjct: 595 SLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI-AN 653
Query: 295 GYNV--TVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
Y++ ++ + M+ Y + +EAL I +M P
Sbjct: 654 DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 145/322 (45%), Gaps = 12/322 (3%)
Query: 49 KRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKE 108
K+ PN + Y C G L +A L+ + + V+ T+ L+++ G++
Sbjct: 41 KKKEPNIIPDEQFDY-LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHL 99
Query: 109 AKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIIN 168
+ + +P+ + L+ Y + A+ +F+ M +R ++ +++ +I
Sbjct: 100 GR-ILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIG 154
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR-GTP 227
+ E KL M + ++ D + ++ G G + +A K+++ + + G
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV-EAGKVIHSVVIKLGMS 213
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
+ N +L V K +D A + ++++ DV + ++ C+ G+ ++A E+
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+++ +G + + + ++I GY + G CD A+ L+ KME+ G D T+ +I L
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 348 KGENDKGEKLLREMVARGLLYN 369
G + + R+M G++ N
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPN 351
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 163/344 (47%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V+ T+I K K+ + +Y + KRI PN +T +I C G+L++ V LL+
Sbjct: 199 VITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLD 258
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
+ KR V LV + +E ++E+ ++ ++ + + +T+ YS ++
Sbjct: 259 RICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEG 318
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
++ A+ +F+ M++RG S + YT+ + C+ V EA +LL EM + +N
Sbjct: 319 DLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFN 378
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
LI G + G + M RG P +N ++ + K NV++A ++ + D+
Sbjct: 379 CLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDK 438
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G PD TY+ LI G + + A ++F ++ + + + + +I G C G +
Sbjct: 439 GFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAG 498
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
+ M+ P+A Y+ +I+A + G+ +++ EM++
Sbjct: 499 EKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 153/299 (51%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P+ + +I LCK+ + + DL + KR P+ + TSL++ ++++++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL +++K M V+ ++I+V A KEG++ A+ VF M+++G N+ Y+ +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C +V +A+ + + M + GVSP +++ +I G + ++ + + M + ++
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+N ++ + K+ ++ A +++ + +G PD TY+ L+ + +++D+A+ L E
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
++ + + P + LI GLC G+++ ++ + + + Y +I + K G
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIG 528
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 133/275 (48%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P V++ T+++ + ++ + ++ L ++ K + + + Y+ ++Y G L A +
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+EM+ + + + V C++G+VKEA+ + + M + GV P +++ L+ G+
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
K + +MV RG+ P ++ ++ + KI+ V+ A ++L + + + D
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
Y+ LI G + I A KL EM +R P + L+ LC V+ +K ++
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMK 506
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+ I+P+ Y LI K+G +A ++ +++
Sbjct: 507 KRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 118/237 (49%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
L+ Y ++ + D+F + G + V + +I+ K K+ D W++ + ++
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I + I +I LCK GR+ + L++ + + P VI L+ + + +++++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+L+K + + + D Y+I++ K G L A+++F ++L +G++ YTV +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
C++G EA L+S+ME SG P T+ +I G +KG + MV RGL+
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 126/275 (45%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
F++LV K ++ +VF + G + ++ ++L+ K + I+ +
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+ + P+ + I+I LCK + E LLD + ++ + I SL+ + + RI
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
++ L+ + + D I Y+ ++ K ++ A + E+ +G + F YT+ +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
C+ G +K+A+ + ++ G + + + +I G+ + G ++ L M + G M
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
P + +++++ + ++ ++L + + +G +
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV 441
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 18/233 (7%)
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE---------------MHSEKIIADT-IC 197
R + ++SY + I+ L K +++ +A L++ + + +I + T +
Sbjct: 107 RNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLV 166
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
++ L+ K+ + + + + G VIT N L+ KS +D + I E
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKS-KIDDLVWRIYECA 225
Query: 258 -DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
D+ I P+ T I+I LCK GRLK+ ++ I K +V T ++ +E
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+E+++L+ ++ + D + Y I++ A ++G+ K+ EM+ RG N
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSAN 338
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 158/339 (46%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
L K +YT + SL K +A ++ EM K IP ++ Y+ LI F ++
Sbjct: 243 LAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVIT 302
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L E K++ + +V +EGN++ V A M K +K ++++G
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ + +A ++ +K +Y I IN C+++ ++A L DEM +
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ Y++++D K R+SDA +L+ +M RG P++ YN L+D+ ++ ++ +A + K
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
E++ + PD +YT +I + L+ E++Q+ + + +M+ + K
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
DE + L+ M+ G DA Y + AL + G N +
Sbjct: 543 RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQ 581
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M T + +R+ +K + I++ K + ++A +Y + + VTY
Sbjct: 334 METTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAI 393
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
I +C + + +A L +EM+ K D V ++ ++D K + +A + A M ++G
Sbjct: 394 AINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRG 453
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
KPN Y+SL+D + ++ +A+ I+ M + V PD SYT +I+ + K ++
Sbjct: 454 CKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCV 513
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+L E + D ++ K RI + +L+ +M GT D Y+ L+ L
Sbjct: 514 ELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ- 119
L+YG+ G + A L +EM + V +FN L+ A + EA F + ++
Sbjct: 130 LLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G+ P+ V+Y++++ C ++ IF + K G PD+ S+ ++ + ++ E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
++ D M S+ + + YNS + GL + + +DA L++ M G PDV TYN L+
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+N+++ + E++++G+ PD TY +LI LCK G L A E+ ++ +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 300 VQAYTVMINGYCKEGLCDEALALI--SKMESSGR-MPD 334
Y ++ G DEA L+ K++S R +PD
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPD 405
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 35 LVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILK-RMDVEVHTF 93
+ A+ L+ EM ++ +L+ + +L +A+ E+ K + ++ T+
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
N ++ ALC++G++ + ++F + K G +P+ +S+++L++ + + + I++LM
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
+ +SP+++SY + GL + K +A L+D M +E I D YN+LI + +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT----YT 269
K NEM +G PD +TY L+ +LCK ++D+A+ E+ ++ IK + + Y
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV----EVSEEAIKHKLLSRPNMYK 372
Query: 270 ILIDGLCKVGRLKDAQEIFQDILIKGY 296
+++ L G++ +A ++ ++ ++ Y
Sbjct: 373 PVVERLMGAGKIDEATQLVKNGKLQSY 399
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE- 189
L+ GY + E A +F+ M + V+S+ +++ K +DEA K E+ +
Sbjct: 130 LLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I D + YN++I LC+ G + D + E+ G PD+I++N LL+ + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ ++ + + P++ +Y + GL + + DA + + +G + V Y +I
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
Y + +E + ++M+ G PD VTY ++I L +KG+ D+ ++ E + LL
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 107/210 (50%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
EL + + PD+V Y T+I +LC+ + D ++ E+ P+ +++ +L+ F
Sbjct: 182 ELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR 241
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+ + + M K + + ++N V L + +A N+ VM +G+ P+ +Y
Sbjct: 242 ELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTY 301
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ Y + + + +N M ++G++PD +Y ++I LCK +D A ++ +E
Sbjct: 302 NALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLV 218
K+++ Y +++ L G+I +A +LV
Sbjct: 362 HKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN-LMVKRGVSPDVQS 162
G + A +F M + + S+++L+ Y K++++A F L K G++PD+ +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y +I LC+ +D+ + +E+ D I +N+L++ + + ++ + M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ P++ +YN + L ++ A+ LI ++ +GI PDV TY LI L+
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+ + + ++ KG Y ++I CK+G D A+ + + + Y+ ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 343 RALFEKGENDKGEKLLR 359
L G+ D+ +L++
Sbjct: 376 ERLMGAGKIDEATQLVK 392
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 89/176 (50%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
E L + +PD++ + T+++ + +L + ++ M +K + PN +Y S + G
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ A+ L++ M + + +VHT+N L+ A + N++E + M ++G+ P+TV+
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
Y L+ C ++++A ++ +K + Y ++ L +DEA +L+
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PD+ Y +I C+ S +Y + +EM K I PN+ ++ +I GF + +
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L M + +++ V T+NI + +LCK KEAK + M+ G+KPNTV+YS L+ G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
C + +AK +F +MV RG PD + Y +I LCK + A L E + +
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
SL++GL K ++ +A +L+ ++ + T
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEKFT 393
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%)
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
++ ++ T+N ++ C+ G+ + ++ A M ++G+KPN+ S+ ++ G+ + ++
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+ +M RGV+ V +Y I I LCK K EA LLD M S + +T+ Y+ LI G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
C +A KL M +RG PD Y L+ LCK + + A++L KE ++ P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 266 FTYTILIDGLCKVGRLKDAQEI 287
L++GL K ++++A+E+
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKEL 384
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 151/328 (46%), Gaps = 10/328 (3%)
Query: 8 LELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
LE+ R + PD + ++ +++L + K S +L + R P+ + +
Sbjct: 64 LEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAH 121
Query: 64 GFCIVGQ---LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ- 119
+ Q L ++ + ++ + V + N L+ A + KEAK V+ M K
Sbjct: 122 AIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY 181
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G++P+ +Y+ ++ +C + + I M ++G+ P+ S+ ++I+G DE
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K+L M + YN I LCK + +A L++ M G P+ +TY+ L+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C + ++A L K + ++G KPD Y LI LCK G + A + ++ + K + +
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 300 VQAYTVMINGYCKEGLCDEALALISKME 327
++NG K+ +EA LI +++
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVK 389
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 138/305 (45%), Gaps = 2/305 (0%)
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN-VKEAKNVFA 114
+ +++ + LL+ I R D++ F L + N + + VF
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFR 140
Query: 115 VMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKI 173
+ K + S ++L+ + K+ +AK ++ M K G+ PD+++Y +I C+
Sbjct: 141 DLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
++ ++ EM + I ++ + +I G + + K++ M RG V TY
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTY 260
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
N + LCK +A AL+ + G+KP+ TY+ LI G C ++A+++F+ ++
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVN 320
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
+G + Y +I CK G + AL+L + +P + ++ L + + ++
Sbjct: 321 RGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEE 380
Query: 354 GEKLL 358
++L+
Sbjct: 381 AKELI 385
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
I P+ TY +I FC G + ++ EM K + +F +++ E E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
V A+M +GV +Y+ + C K+ +AK + + M+ G+ P+ +Y+ +I+G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
C +EA KL M + D+ CY +LI LCK G A L E + P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
L++ L K V++A LI +++++
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 158 PDVQSYTIIINGL---CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
PD++S + + + M+D + ++ ++ +I N+L+ +A
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 215 WKLVNEMHHR-GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
++ EM G PD+ TYN ++ V C+S + + +++ E++ +GIKP+ ++ ++I
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
G + + ++ + +G N+ V Y + I CK EA AL+ M S+G P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+ VTY +I + + ++ +KL + MV RG
Sbjct: 291 NTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS-EKIIADTICYNSLIDGL 205
+F + K +S V+S ++ K EA ++ EM I D YN +I
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLC---KSHNVDKAIALIKEIQDQGIK 262
C+ G S ++ +V EM +G P+ ++ ++ KS V K +A++K D+G+
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK---DRGVN 254
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
V TY I I LCK + K+A+ + +L G Y+ +I+G+C E +EA L
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
M + G PD+ Y +I L + G+ + L +E + +
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E L +++ + V V Y I SLCK K +A L M++ + PN VTY+ LI
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
+GF C E + +EAK +F +M+ +G K
Sbjct: 300 HGF-----------------------------------CNEDDFEEAKKLFKIMVNRGCK 324
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P++ Y +L+ C + A + +++ P ++NGL K V+EA +L
Sbjct: 325 PDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Query: 183 LDEMHSEKIIADTICYNSLIDGL 205
+ ++ EK + +N + L
Sbjct: 385 IGQVK-EKFTRNVELWNEVEAAL 406
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
+N L + G+ + A + +M QG P+ + L+ + + + ++ M
Sbjct: 160 AYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKM 219
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
K G P V Y I++ L K D A + ++ + ++ ++ + L+ GLCK GRI
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
+ +++ M PDV Y ++ L N+D ++ + E++ IKPDV Y L
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
+ GLCK GR++ E+F ++ K + + Y V+I G+ +G A L + SG
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ D Y +I+ L + DK KL +
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 34/376 (9%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
EL+ Q P + +I ++ Y +Y +M P Y ++
Sbjct: 182 ELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKN 241
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G A+ + + + E TF ILV LCK G ++E + M + KP+ +Y
Sbjct: 242 GYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAY 301
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++ ++ + +++ M + + PDV +Y ++ GLCK V+ ++L EM
Sbjct: 302 TAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
++I+ D Y LI+G G++ A L ++ G D+ YN ++ LC + VDK
Sbjct: 362 KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDK 421
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV---------- 298
A L + ++ ++PD T + ++ + RL D + + I GY V
Sbjct: 422 AYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKL 481
Query: 299 ------------------------TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
+V Y +++ K G ++L+L +M G PD
Sbjct: 482 LCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPD 541
Query: 335 AVTYEIIIRALFEKGE 350
+ +Y I I EKG+
Sbjct: 542 SSSYSIAICCFVEKGD 557
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 177/395 (44%), Gaps = 35/395 (8%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI 67
L+ +R L KPDV YT +I +L + + + ++ EM I P+ + Y +L+ G C
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G++++ L EM K++ ++ + +L++ +G V+ A N++ ++ G +
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT------IIINGLCKIKMVDEA-- 179
Y++++ G C V +V+KA +F + ++ + PD ++ + +++N L V E
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 180 -------------WKLL--DEMHSEKII-----------ADTICYNSLIDGLCKLGRISD 213
+KLL DE + + YN L++ L K+G I
Sbjct: 466 ELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQK 525
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ L EM G PD +Y+ + + +V A + ++I + P + Y L
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTK 585
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQ-AYTVMINGYCKEGLCDEALALISKMESSGRM 332
GLC++G + + ++ L + ++ Y + + CK ++ + ++ +M G
Sbjct: 586 GLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVF 645
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
+ V Y II + + G ++ E+ R ++
Sbjct: 646 INEVIYCAIISGMSKHGTIKVAREVFTELKKRKVM 680
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 42/379 (11%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A+L + +RR +KPDV+ Y T++ LCKD V Y+L+ EM K+I + Y
Sbjct: 312 GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIY 371
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI GF G+++ A L +++ ++ +N ++ LC V +A +F V ++
Sbjct: 372 RVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIE 431
Query: 119 QGVKPNTVSYSSLMDGY----------------------------------CLVKEVNK- 143
+ ++P+ + S +M Y C +E N
Sbjct: 432 EELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAM 491
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A D+F ++ +G V Y I++ L K+ + ++ L EM D+ Y+ I
Sbjct: 492 ALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAIC 550
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE-IQDQGIK 262
+ G + A ++ P + Y L LC+ +D + L++E + +
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG 610
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P F Y + + +CK + ++ ++ +G + Y +I+G K G A +
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREV 670
Query: 323 ISKMESSGRMPDA--VTYE 339
++++ M +A V YE
Sbjct: 671 FTELKKRKVMTEADMVVYE 689
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 118 KQGVKPNTVSYSSLMDGYCLVK--EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
++G K + +Y++ YCL + A + LM +G P + + I+I
Sbjct: 151 QKGYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR------- 201
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
MH++ + Y + +M G P V YN
Sbjct: 202 ----------MHADNRRGLRVYY------------------VYEKMKKFGFKPRVFLYNR 233
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++D L K+ D A+A+ ++ ++ G+ + T+ IL+ GLCK GR+++ EI Q +
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL 293
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
V AYT MI EG D +L + +M PD + Y ++ L + G ++G
Sbjct: 294 CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY 353
Query: 356 KLLREMVARGLL 367
+L EM + +L
Sbjct: 354 ELFMEMKGKQIL 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 123/308 (39%), Gaps = 72/308 (23%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ +Y +I LC V AY L+ + + + P+ T + ++ + ++ +L +L
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 79 NEM---------------------------------ILK-RMDVEVHTFNILVDALCKEG 104
+ ILK + V +NIL++AL K G
Sbjct: 462 ERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMG 521
Query: 105 NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
+++++ ++F M K G +P++ SYS + + +V A +++ P + +Y
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYL 581
Query: 165 IIINGLCKIKMVD------------------------------------EAWKLLDEMHS 188
+ GLC+I +D + K++DEM+
Sbjct: 582 SLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQ 641
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG--TPPDVITYNPLLDVLCKSHNV 246
E + + + Y ++I G+ K G I A ++ E+ R T D++ Y +L K
Sbjct: 642 EGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTA 701
Query: 247 DKAIALIK 254
D ++ IK
Sbjct: 702 DLVLSGIK 709
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 120/231 (51%)
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
L +N+A +I M G P +S+ I+N L K+ DE K+ + D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 197 CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
C N LI GLC+ G + A +L++E + + P+V+T++PL+ C ++A L++ +
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ + I+PD T+ ILI GL K GR+++ ++ + + +KG Y ++ G +
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
EA ++S+M S G P ++Y+ ++ L E + + +LR+MV G +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 125/256 (48%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G + A + M G P++ S++ +++ K ++ IF K GV D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
I+I GLC+ ++ A +LLDE +K + + ++ LI G C G+ +A+KL+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
PD IT+N L+ L K V++ I L++ ++ +G +P+ TY ++ GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
A+E+ ++ G + +Y M+ G C+ E ++ +M + G +P + + +++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 344 ALFEKGENDKGEKLLR 359
+ K +D L R
Sbjct: 386 CVVSKNNDDSQANLDR 401
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V+ D +I LC+ + A L E ++ PN +T++ LI GFC G+ ++A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
LL M +R++ + TFNIL+ L K+G V+E ++ M +G +PN +Y ++ G
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
K +AK++ + M+ G+ P SY ++ GLC+ K V E +L +M + + T
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Query: 196 ICY 198
+ +
Sbjct: 378 LMW 380
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 12 RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM-VAKRIPPNAVTYTSL--IYGFCIV 68
+R+ +P +Y +I+ + K+ + ++ + + KR + + +L IYG +
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYG-NLA 145
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G++ +A+ +L M +FN +++ L E +F K GV+ +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+ G C + A + + ++ P+V +++ +I G C +EA+KLL+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL-DVLCKSHNVD 247
E+I DTI +N LI GL K GR+ + L+ M +G P+ TY +L +L K N++
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
A ++ ++ G++P +Y ++ GLC+ + + + + ++ G+
Sbjct: 326 -AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + I++ L KL + + ++ + +A LI G C G L+ A+ L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
L+E ++ V TF+ L+ C +G +EA + M K+ ++P+T++++ L+ G
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
V + D+ M +G P+ +Y ++ GL K EA +++ +M S + +
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
Y ++ GLC+ + + ++ +M + G P + + ++ + +N D L
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANL 399
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 95/183 (51%)
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
++++ NIL+ LC+ GN++ A + +Q +PN +++S L+ G+C + +A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+ M K + PD ++ I+I+GL K V+E LL+ M + + Y ++ GL
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
R +A +++++M G P ++Y ++ LC++ +V + +++++ + G P
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Query: 266 FTY 268
+
Sbjct: 378 LMW 380
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G AAL+LL +Q +P+V+ ++ +I C +A+ L M +RI P+ +T+
Sbjct: 216 GNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITF 275
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI G G++++ + LL M +K + T+ ++ L + EAK + + M+
Sbjct: 276 NILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSP 158
G++P+ +SY ++ G C K V + + MV G P
Sbjct: 336 WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E LE + ++ ++PD + + +I L K V + DL M K PN TY ++
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
YG + +A ++++MI M ++ +V LC+ +V E V M+ G
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Query: 123 PNTVSYSSLMDGYCLVKEVN 142
P T+ + ++ C+V + N
Sbjct: 375 PKTLMWWKVVQ--CVVSKNN 392
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 216 KLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGL 275
+L EM RG + +TY L+ L ++ + D A + KE+ G+ PD+ TY IL+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 276 CKVGRLK---------DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
CK G+L+ D ++F + +KG V YT MI+G+CK+G +EA L KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ G +PD+ TY +IRA G+ +L++EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+L EM ++ +T+ Y +LI GL + G A ++ EM G PPD++TYN LLD L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 241 CKSHNVDKAIA---------LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
CK+ ++KA+ L + +G+KP+V TYT +I G CK G ++A +F+ +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
G Y +I + ++G + LI +M S DA TY ++ L + G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRL 180
Query: 352 DKG 354
DKG
Sbjct: 181 DKG 183
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 112 VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
+F M ++G+ NTV+Y++L+ G + + A++IF MV GV PD+ +Y I+++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 172 K---------IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
K V++ W L + + + + + Y ++I G CK G +A+ L +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
G PD TYN L+ + + + LIKE++ D TY ++ D + GRL
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 41 DLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDAL 100
+L+ EM + + N VTYT+LI G G A + EM+ + ++ T+NIL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 101 CKE---------GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
CK G V++ ++F + +GVKPN V+Y++++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
+ G PD +Y +I + + +L+ EM S + D Y + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
++F M +RG+ + +YT +I GL + D A ++ EM S+ + D + YN L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 206 CK---------LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
CK G++ D W L + +G P+V+TY ++ CK ++A L +++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
++ G PD TY LI + G + E+ +++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
+ L +E+ +G+ + TYT LI GL + G AQEIF++++ G + Y ++++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 310 YCKEGLCDEALA---------LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
CK G ++AL L + G P+ VTY +I +KG ++ L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 361 MVARGLL 367
M G L
Sbjct: 121 MKEDGPL 127
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP+VV YTT+I CK +AY L+ +M P++ TY +LI G +
Sbjct: 91 VKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 150
Query: 76 GLLNEMILKRMDVEVHTFNILVDAL 100
L+ EM R + T+ ++ D L
Sbjct: 151 ELIKEMRSCRFAGDASTYGLVTDML 175
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 18/288 (6%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
+++LCK+KLV +A ++ ++ + I P+ +TY ++I GFC VG L +A L N M+ +
Sbjct: 188 VETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMM-KQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
DV++ +++ L K+ EA VF VM+ K+G + Y ++D C ++ A+
Sbjct: 247 DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMAR 306
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+F+ M +RGV D ++ +I GL + V EA+ L++ + + D Y+ LI GL
Sbjct: 307 KVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGL 362
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K+ R S+A ++ +M RG P + TY LL + H + +G P V
Sbjct: 363 VKIKRASEATEVFRKMIQRGCEPIMHTYLMLL----QGH--------LGRRGRKGPDPLV 410
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
TI + G+ K G+ + + + L +G V Y+ ++ Y E
Sbjct: 411 NFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSNE 458
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 41/269 (15%)
Query: 78 LNEMILKRMDVEVHTFNILV-----------------------------------DALCK 102
L + I KR V TF I++ + LCK
Sbjct: 134 LAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCK 193
Query: 103 EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
E V+EAK VF + +K+ +KP+ ++Y +++ G+C V ++ +A ++NLM+ G D+++
Sbjct: 194 EKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEA 252
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEK-IIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
I+ L K DEA K+ M S++ D Y +ID LCK GRI A K+ +EM
Sbjct: 253 GKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEM 312
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
RG D +T+ L+ L V +A L++ +++ PD+ Y LI GL K+ R
Sbjct: 313 RERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRA 368
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+A E+F+ ++ +G + Y +++ G+
Sbjct: 369 SEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 124 NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
N ++ ++ +E+ K + F+LM G +V++ + LCK K+V+EA K +
Sbjct: 145 NDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEA-KFV 203
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
E I D I Y ++I G C +G + +A KL N M G D+ +++ L K
Sbjct: 204 FIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKK 263
Query: 244 HNVDKAIALIK-EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA 302
+ D+A + + +G D Y ++ID LCK GR+ A+++F ++ +G V
Sbjct: 264 NQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLT 323
Query: 303 YTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ +I G + EA L+ +E+ PD Y +I+ L + + ++ R+M+
Sbjct: 324 WASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMI 379
Query: 363 ARG 365
RG
Sbjct: 380 QRG 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 158 PDVQSYTIIINGLCKI----KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
PD + N + I + +D W+L E+ ++ D + ++ L +
Sbjct: 106 PDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKK 164
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ M+ G +V T N ++ LCK V++A + +++ + IKPD TY +I
Sbjct: 165 CVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLK-EFIKPDEITYRTMIQ 223
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESS-GRM 332
G C VG L +A +++ ++ +G++V ++A ++ K+ DEA + M S G
Sbjct: 224 GFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGD 283
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
D Y ++I L + G D K+ EM RG+
Sbjct: 284 LDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGV 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D Y +ID LCK+ + A ++ EM + + + +T+ SLIYG + ++ +A GL+
Sbjct: 285 DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLV 344
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ + ++ ++ L+ L K EA VF M+++G +P +Y L+ G+
Sbjct: 345 EGV----ENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGR 400
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK 172
+ ++G P V TI + G+ K
Sbjct: 401 RG------------RKGPDPLVNFDTIFVGGMIK 422
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
L ++ HH T N +L ++ S N+D L +EI +G+ D T+ I++ L
Sbjct: 99 LYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLA 157
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAV 336
LK F + GY V+ + CKE L +EA + K++ + PD +
Sbjct: 158 SARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIK-PDEI 216
Query: 337 TYEIIIRALFEKGENDKGEKLLREMVARGL 366
TY +I+ + G+ + KL M+ G
Sbjct: 217 TYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 6/268 (2%)
Query: 95 ILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
+++D + +A F +M K P ++ L+ C + KA++ F L K+
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKK 252
Query: 155 GVSPDVQSYTIIINGLCKIKM-VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
DV+ + +I+NG C I V EA ++ EM + I + Y+ +I K+G + D
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
+ +L +EM RG P + YN L+ VL + D+A+ L+K++ ++G+KPD TY +I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
LC+ G+L A+ + ++ + + TV + + E + L ++ +M+ S P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFE----KTLEVLGQMKISDLGP 428
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREM 361
T+ +I+ LF+ + + K+ EM
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 39/279 (13%)
Query: 53 PNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL---KRMDVEVHTFNILVDALCK-EGNVKE 108
P + L+ C G +++A E +L K V+V FN++++ C +V E
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKA----EEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTE 277
Query: 109 AKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIIN 168
AK ++ M + PN SYS ++ + V + + +++ M KRG++P ++ Y ++
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
L + DEA KL+ +++ E + D++ YNS+I LC+ G++ A ++ M P
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
Query: 229 DVITYNPLLDV-------------------------------LCKSHNVDKAIALIKEIQ 257
V T++ L+ L K + A+ + E+
Sbjct: 398 TVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMD 457
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
I + Y I GL G L+ A+EI+ ++ KG+
Sbjct: 458 RFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 37/276 (13%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKL-VSDAYDLYSEMVAKRIPPNAVTYTSL 61
E + L ++L DV + I++ C V++A ++ EM I PN +Y+ +
Sbjct: 241 EKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHM 300
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I F VG L ++ L +EM + + + +N LV L +E EA + + ++G+
Sbjct: 301 ISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGL 360
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV--------------------- 160
KP++V+Y+S++ C +++ A+++ M+ +SP V
Sbjct: 361 KPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQ 420
Query: 161 ----------QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
+++ +I+ L K K + A K+ EM +I+A+ Y + I GL G
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ A ++ +EM +G NP+L L + V
Sbjct: 481 LEKAREIYSEMKSKG-----FVGNPMLQKLLEEQKV 511
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQ-SYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
+CL++ D+FN VS D + + ++++ +A + D M K
Sbjct: 174 AWCLIR------DMFN------VSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHT 221
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK-SHNVDKAIA 251
+ L+ LC+ G I A + + + P DV +N +L+ C +V +A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKR 280
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ +E+ + I P+ +Y+ +I KVG L D+ ++ ++ +G ++ Y ++
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLT 340
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+E DEA+ L+ K+ G PD+VTY +IR L E G+ D +L M++ L
Sbjct: 341 REDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 18/329 (5%)
Query: 8 LELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR---IPPNAVTYTSLIYG 64
LE LR KPD + Y I ++ + + Y+ + KR + P + Y + I
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFV---VTGNLYERQVVLKKKRKLGVAPRSSDYRAFILD 302
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVK-----EAKNVFAVMMKQ 119
+L +A + ++ + ++ N ++DAL G+V A M+
Sbjct: 303 LISAKRLTEAKEVAEVIVSGKFPMD----NDILDALI--GSVSAVDPDSAVEFLVYMVST 356
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G P + S L C + + + L+ +G ++QSY+++I+ LCK V E+
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+ L EM E + D YN+LI+ CK I A KL +EM G ++ TYN L+
Sbjct: 417 YTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK 476
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY-NV 298
L + ++++ L ++ ++GI+PD Y LI+GLCK +++ A E+F+ + + + V
Sbjct: 477 LSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTV 536
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKME 327
T + + + C G EA L+ + E
Sbjct: 537 TRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 161/359 (44%), Gaps = 14/359 (3%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
Q + PDV ++ L D A L+ +M K + N + + I FC + Q
Sbjct: 148 QEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQ 205
Query: 74 AVGLLNEMILKRMDVEVHTFNILV-DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+ L++E+ +++ +L+ +LCK +A + + KP+ ++Y +
Sbjct: 206 LLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIA 265
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
+ + + + + + + K GV+P Y I L K + EA ++ + + S K
Sbjct: 266 EAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFP 325
Query: 193 ADTICYNSLIDGLCKLGRIS-----DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
D N ++D L +G +S A + + M G P + T + L LC+ D
Sbjct: 326 MD----NDILDAL--IGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSD 379
Query: 248 KAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMI 307
I + + +G ++ +Y+++I LCK GR++++ Q++ +G V Y +I
Sbjct: 380 HLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 308 NGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
CK + A L +M G + TY ++IR L E+GE ++ +L +M+ RG+
Sbjct: 440 EACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 14/258 (5%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
A ELL + ++ Y+ +I LCK V ++Y EM + + P+ Y +LI C
Sbjct: 384 AYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC 443
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
++ A L +EM ++ + + T+N+L+ L +EG +E+ +F M+++G++P+
Sbjct: 444 KAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDET 503
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKR---GVSPDVQSYTIIINGLCKIKMVDEAWKLL 183
Y SL++G C ++ A ++F ++R V+ V S ++ LC EA +LL
Sbjct: 504 IYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVL--NLCSNGHSGEASQLL 561
Query: 184 DEM-HSEKIIADTICYNSLIDGL-CKLGRISDAWKLVNEMHHRGTPPDVITYNP-LLDVL 240
E H E A + + D ++G W + E+ +P V T + LL
Sbjct: 562 REREHLEHTGAHVVLLKCVADAKEVEIGIRHMQW--IKEV----SPSLVHTISSDLLASF 615
Query: 241 CKSHNVDKAIALIKEIQD 258
C S + D + I+ I++
Sbjct: 616 CSSSDPDSILPFIRAIEN 633
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 68/123 (55%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
E+ AL+ ++++ + PDV +Y +I++ CK +++ A L+ EM + N TY LI
Sbjct: 415 ESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLI 474
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G+ ++++ L ++M+ + ++ + + L++ LCKE ++ A VF M++ K
Sbjct: 475 RKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHK 534
Query: 123 PNT 125
T
Sbjct: 535 TVT 537
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 42/271 (15%)
Query: 110 KNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIIN 168
+++ + + + P+ V+ ++D + L+ + A FN ++ G S D SY I
Sbjct: 34 QSLHGLGFRHSISPSLVA--RVIDPF-LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFK 90
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR------------------ 210
L + L ++ S KI+ D+ Y SLID L LGR
Sbjct: 91 SLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLV-LGRKAQSAFWVLEEAFSTGQE 149
Query: 211 -------------ISD-----AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
SD A KL +M H+G + + + + C+S ++ + L
Sbjct: 150 IHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRL 209
Query: 253 IKEIQDQGIKPDVFTYTILI-DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ E++ + + +LI LCK R DA I +++ AY V+ +
Sbjct: 210 VDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFV 269
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIII 342
G E ++ K G P + Y I
Sbjct: 270 VTGNLYERQVVLKKKRKLGVAPRSSDYRAFI 300
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 14/352 (3%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ-------LQQAV 75
+ + L + + A+ L +E+ ++ PN +++ S+ C + + L+ V
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ E+ K+ V+ FNIL+ A C E +KEA+++F + + P+ + + L+ G+
Sbjct: 164 KMEKEIFRKKFGVD--EFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGF 220
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+V + ++ MVKRG P+ +Y I I+G CK + EA +L ++M
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+LI G A +L +E+ RG PD YN L+ L K +V AI ++KE
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGR--LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
++++GI+PD T+ + G+ K E +Q + + +++ +C
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
G + L L M G P E++ AL + + + + V RG
Sbjct: 401 GEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 137/290 (47%), Gaps = 3/290 (1%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ L+ FC ++++A + E + R + +V T NIL+ + G+V + + M+
Sbjct: 179 FNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
K+G KPN+V+Y +DG+C + +A +F M + VQ T +I+G +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A +L DE+ + D YN+L+ L K G +S A K++ EM +G PD +T++ +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 238 DVLCKS--HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+ KS + ++++++ + P T +L+ C G + ++++ +L KG
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
Y A ++ C ++A + GR Y ++ +L
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 6/300 (2%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+ R++ V + ++ + C ++ + +A ++ E + R P+ T L+ GF
Sbjct: 168 EIFRKKF---GVDEFNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEA 223
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G + +EM+ + T+ I +D CK+ N EA +F M +
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ G + + KA+ +F+ + KRG++PD +Y +++ L K V A K++ EM
Sbjct: 284 TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEE 343
Query: 189 EKIIADTICYNSLIDGLCKLGR--ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ I D++ ++S+ G+ K + + +M R P T L+ + C + V
Sbjct: 344 KGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEV 403
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
+ + L K + ++G P +L LC R DA E + +G V+ Y ++
Sbjct: 404 NLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 158 PDVQSYTIIINGLCKIKMVD------EAW-KLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
P++ S+ + LCKI EA+ K+ E+ +K D +N L+ C
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTERE 191
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+ +A + ++H R P DV T N LL ++ +V E+ +G KP+ TY I
Sbjct: 192 MKEARSIFEKLHSRFNP-DVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGI 250
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
IDG CK +A +F+D+ +++TVQ T +I+G +A L ++ G
Sbjct: 251 RIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRG 310
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
PD Y ++ +L + G+ K+++EM +G+
Sbjct: 311 LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Query: 6 AALELLRRQLVK----PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
A EL ++VK P+ V Y ID CK + +A L+ +M T+L
Sbjct: 227 TATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL 286
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I+G + +A L +E+ + + + +N L+ +L K G+V A V M ++G+
Sbjct: 287 IHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 122 KPNTVSYSSLMDGYCLVKE--VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
+P++V++ S+ G KE N + + M +R + P + +++ C V+
Sbjct: 347 EPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLG 406
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
L M + L LC R +DA++ + RG
Sbjct: 407 LDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 188/396 (47%), Gaps = 58/396 (14%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ A EL R + +VV +T ++ + K +S A L+ EM + N V++ +
Sbjct: 90 LGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNT 145
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I G+ G++ +A+ L +EM + + ++N +V AL + G + EA N+F M ++
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V VS+++++DG +V++A+ +F+ M +R ++ S+ +I G + +DEA
Sbjct: 202 V----VSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEAD 253
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+L M D +N++I G + ++ A L + M + +VI++ ++
Sbjct: 254 QLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGY 305
Query: 241 CKSHNVDKAIALI-KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-------- 291
++ ++A+ + K ++D +KP+V TY ++ + L + Q+I Q I
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 292 ------LIKGYNVTVQ-------------------AYTVMINGYCKEGLCDEALALISKM 326
L+ Y+ + + ++ MI Y G EA+ + ++M
Sbjct: 366 EIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
G P AVTY ++ A G +KG + +++V
Sbjct: 426 RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 55/331 (16%)
Query: 42 LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC 101
+YS R+P LI C VG++ +A L + + + +V T+ ++
Sbjct: 37 IYSSSSRPRVPQPEW----LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYI 88
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
K G+++EA+ +F + + N V++++++ GY K+++ A+ +F M +R +V
Sbjct: 89 KLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVV 141
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
S+ +I+G + +D+A +L DEM I++ +NS++ L + GRI +A L M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVS----WNSMVKALVQRGRIDEAMNLFERM 197
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
R DV+++ ++D L K+ VD+A L + ++ I ++ +I G + R+
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRI 249
Query: 282 KDAQEIFQ----------DILIKGY-----------------NVTVQAYTVMINGYCKEG 314
+A ++FQ + +I G+ V ++T MI GY +
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 315 LCDEALALISKMESSGRM-PDAVTYEIIIRA 344
+EAL + SKM G + P+ TY I+ A
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 169/396 (42%), Gaps = 81/396 (20%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G A+ L R + + DVV +T ++D L K+ V +A L+ M + N +++ ++
Sbjct: 185 GRIDEAMNLFER-MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAM 239
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I G+ ++ +A L M + + ++N ++ + + +A +F M ++
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK-- 293
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG-VSPDVQSYTIIINGLCKIKMVDEAW 180
N +S+++++ GY KE +A ++F+ M++ G V P+V +Y I++ + + E
Sbjct: 294 --NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 181 KL------------------LDEMHSE--KIIA-------------DTICYNSLIDGLCK 207
++ L M+S+ ++IA D I +NS+I
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE-IQDQGIKPDVF 266
G +A ++ N+M G P +TY LL + V+K + K+ ++D+ +
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 267 TYTILIDGLCKVGRLKD--------------------------------AQEIFQDILIK 294
YT L+D + GRLKD A+E+ + +L
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET 531
Query: 295 GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
G + Y +M N Y G +EA + KM+ G
Sbjct: 532 GSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 36/176 (20%)
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
LV ++ + P V L+ LCK + +A L + ++ DV T+T +I G
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYI 88
Query: 277 KVGRLKDAQEIFQDI-----------LIKGYNVTVQ-----------------AYTVMIN 308
K+G +++A+E+F + ++ GY + Q ++ MI+
Sbjct: 89 KLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
GY + G D+AL L +M + V++ +++AL ++G D+ L M R
Sbjct: 149 GYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 166/363 (45%), Gaps = 15/363 (4%)
Query: 2 GETSAALELLR---RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ALE+++ + +KP + +++ ++ +L+S +++ +
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ + G L+ A L + M+ + V ++N ++DA + N KEA +F M+
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+GVKP VS + + ++ + + I L V+ G+ +V +I+ CK K VD
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + ++ S +++ +N++I G + GR DA ++M R PD TY ++
Sbjct: 391 AASMFGKLQSRTLVS----WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
+ + A + + + +VF T L+D K G + A+ IF D++ + +
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF-DMMSERH-- 503
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
V + MI+GY G AL L +M+ P+ VT+ +I A G + G K
Sbjct: 504 -VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 359 REM 361
M
Sbjct: 563 YMM 565
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 155/394 (39%), Gaps = 86/394 (21%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
T ++ C+ V +A ++ + +K V Y +++ GF V L +A+ M
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKL----NVLYHTMLKGFAKVSDLDKALQFFVRMRY 128
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
++ V+ F L+ E ++ K + +++K G + + + L + Y ++VN+
Sbjct: 129 DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNE 188
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC------ 197
A+ +F+ M +R D+ S+ I+ G + M A +++ M E + I
Sbjct: 189 ARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 198 -----------------------------YNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
+L+D K G + A +L + M R
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER---- 300
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP------------------------- 263
+V+++N ++D ++ N +A+ + +++ D+G+KP
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 264 ----------DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
+V LI CK + A +F + + T+ ++ MI G+ +
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQN 416
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
G +AL S+M S PD TY +I A+ E
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 145/315 (46%), Gaps = 13/315 (4%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
+++ +VV + ++ID+ +++ +A ++ +M+ + + P V+ ++ +G L++
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ + +D V N L+ CK V A ++F + + + VS+++++ G
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILG 412
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ A + F+ M R V PD +Y +I + ++ + A + + + +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA-IALI 253
+L+D K G I A + + M R V T+N ++D +H KA + L
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGY-GTHGFGKAALELF 527
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV--TVQAYTVMINGYC 311
+E+Q IKP+ T+ +I G ++ + F ++ + Y++ ++ Y M++
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY-MMKENYSIELSMDHYGAMVDLLG 586
Query: 312 KEGLCDEALALISKM 326
+ G +EA I +M
Sbjct: 587 RAGRLNEAWDFIMQM 601
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
+L +V + +I ++ DA + +S+M ++ + P+ TY S+I +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
A + ++ +D V LVD K G + A+ +F +M ++ V ++++++D
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV----TTWNAMID 512
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK---LLDEMHSEK 190
GY A ++F M K + P+ ++ +I+ +V+ K ++ E +S +
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH-NVDKA 249
+ D Y +++D L + GR+++AW + +M P V Y +L C+ H NV+ A
Sbjct: 573 LSMDH--YGAMVDLLGRAGRLNEAWDFIMQM---PVKPAVNVYGAMLGA-CQIHKNVNFA 626
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
+ + + + PD Y +L+ + + +
Sbjct: 627 EKAAERLFE--LNPDDGGYHVLLANIYRAASM 656
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 20/355 (5%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
+V P+VV +TT+I L V D + L EMV + + PN VT + ++ + +++
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ + ++ + +D E+ N LVDA V A NV M ++ + ++Y+SL+
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTR 502
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ + + A + N M G+ D S I+ + ++ L
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
NSL+D K G + DA K+ E+ PDV+++N L+ L + + A++ +
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKD-AQEIFQDILIKGYNV--TVQAYTVMINGYC 311
E++ + +PD T+ IL+ C GRL D E FQ ++ K YN+ V+ Y ++
Sbjct: 619 EMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQ-VMKKIYNIEPQVEHYVHLVGILG 676
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ G +EA ++ M P+A+ ++ ++RA +G GE +M +GL
Sbjct: 677 RAGRLEEATGVVETMHLK---PNAMIFKTLLRACRYRGNLSLGE----DMANKGL 724
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 173/479 (36%), Gaps = 149/479 (31%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY--- 58
G+ A EL L D + +T +I SL + +A YSEMV +PPN T+
Sbjct: 173 GQFKEACELFS-SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 59 -------------------------------TSLIYGFCIVGQLQQAVGLLNEMILKRMD 87
TSL+ + +++ AV +LN +
Sbjct: 232 LGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN----SSGE 287
Query: 88 VEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
+V + +V + KEA F M G++PN +YS+++ V+ ++ K I
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 148 FNLMVKRG--------------------------------VSPDVQSYTIIINGLCKIKM 175
+ +K G VSP+V S+T +I GL
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGF 407
Query: 176 VDEAWKLLDEM-----------------------HSEKII------------ADTICYNS 200
V + + LL EM H +++ + + NS
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
L+D ++ AW ++ M R D ITY L+ + + A+++I + G
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 261 IKPDVFT----------------------YTI-------------LIDGLCKVGRLKDAQ 285
I+ D + Y++ L+D K G L+DA+
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 286 EIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
++F++I V ++ +++G G AL+ +M PD+VT+ I++ A
Sbjct: 584 KVFEEIATP----DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 151/349 (43%), Gaps = 20/349 (5%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V +T +I + K + + A L+ EM+A PN T++S++ + + +
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
+I + + L D K G KEA +F+ + +T+S++ ++ +
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGAR 204
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA----DT 195
+ +A ++ MVK GV P+ ++ ++ + + + +HS I+ +
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-----EFGKTIHSNIIVRGIPLNV 259
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ SL+D + ++ DA +++N + DV + ++ ++ +A+ E
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ G++P+ FTY+ ++ V L ++I + G+ + +++ Y K
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK--- 372
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
C + S++ + P+ V++ +I L + G LL EMV R
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 33/328 (10%)
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ------ 119
C V Q ++ ++ D FN L+ LC+E ++ +A+NV+ + Q
Sbjct: 158 CSVRQTVESFWKFKRLVPDFFDTAC--FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQ 215
Query: 120 -------------------------GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
G+KP+ V+Y+SL+D YC +E+ KA + + M +
Sbjct: 216 TFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
+PDV +YT +I GL I D+A ++L EM D YN+ I C R+ DA
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDA 335
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
KLV+EM +G P+ TYN VL ++++ ++ L + P+ + LI
Sbjct: 336 DKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKM 395
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
+ ++ A +++D+++KG+ V+++ C +EA + +M G P
Sbjct: 396 FKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
Query: 335 AVTYEIIIRALFEKGENDKGEKLLREMV 362
V+++ I + ++D+ L+++M
Sbjct: 456 NVSFKRIKLLMELANKHDEVNNLIQKMA 483
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 41/211 (19%)
Query: 170 LCKIKM-VDEAWKLLDEMHSEKIIAD---TICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
LC ++ V+ WK ++++ D T C+N+L+ LC+ ++DA + + + H+
Sbjct: 157 LCSVRQTVESFWKF------KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQF 210
Query: 226 TP-------------------------------PDVITYNPLLDVLCKSHNVDKAIALIK 254
P PDV+TYN L+DV CK ++KA LI
Sbjct: 211 QPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLID 270
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+++++ PDV TYT +I GL +G+ A+E+ +++ G V AY I +C
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIAR 330
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+A L+ +M G P+A TY + R L
Sbjct: 331 RLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 2/232 (0%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+KPDVV Y ++ID CKD+ + AY L +M + P+ +TYT++I G ++GQ +A
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+L EM +V +N + C + +A + M+K+G+ PN +Y+
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
L ++ ++ +++ M+ P+ QS +I + + VD A +L ++M + + +
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYS 421
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN--PLLDVLCKSHN 245
+ + L+D LC L ++ +A K + EM +G P +++ LL L H+
Sbjct: 422 LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHD 473
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 155/311 (49%), Gaps = 10/311 (3%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D + ++ +LC++K ++DA ++Y + + P+ T+ L+ G+ ++A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
EM K + +V T+N L+D CK+ +++A + M ++ P+ ++Y++++ G L+
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ +KA+++ M + G PDV +Y I C + + +A KL+DEM + + + Y
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N L + +W+L M P+ + L+ + + VD A+ L +++
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY---NVTVQAYTVMINGYCKEGL 315
+G +L+D LC + ++++A++ +++ KG+ NV+ + +++ K
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH-- 472
Query: 316 CDEALALISKM 326
DE LI KM
Sbjct: 473 -DEVNNLIQKM 482
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
+R + PDV+ YTT+I L A ++ EM P+ Y + I FCI +
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
L A L++EM+ K + T+N+ L ++ + ++ M+ PNT S
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
L+ + ++V+ A ++ MV +G ++++ LC + V+EA K L EM
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEM 447
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 145/291 (49%), Gaps = 18/291 (6%)
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKE----GNVKEAKNVF---------AVM 116
++ AV ++ ++ + ++ ++ T N L+ + + K + VF A
Sbjct: 177 EIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKIKM 175
M +KPN +++S+M + E + I+ M + G SP+V SY +++ C +
Sbjct: 237 MIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGL 296
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+ EA K+ +EM ++ D + YN++I GLC + A +L +M +G +TY
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC--KVG-RLKDAQEIFQDIL 292
L++ CK+ +VD + + +E++ +G + D T L++GLC + G R+ +A +I +D +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 293 IKG-YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+ + + Y +++ C++G D AL + ++M G P TY I
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK-RIPPNAVTYTSLIYGFCIVGQLQQA 74
+KP+ + +++ S ++ ++ EM + PN +Y L+ +C G + +A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ EM ++ + ++ +N ++ LC V +AK +F M +G++ ++Y L++G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCK----IKMVDEAWKLLDEMHSEK 190
YC +V+ ++ M ++G D + ++ GLC ++V+ A + D +
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
CY L+ LC+ G++ A + EM +G P TY +D
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 53/281 (18%)
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS---------- 188
KE++ A + + RG++ + + +I + + + +K+ E+
Sbjct: 176 KEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAK 235
Query: 189 ---EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR-GTPPDVITYNPLLDVLCKSH 244
KI + +NS++ + G ++ EM G P+V +YN L++ C
Sbjct: 236 KMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG 295
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
+ +A + +E++ +G+ D+ Y +I GLC + A+E+F+D+ +KG T Y
Sbjct: 296 LMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE 355
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVT--------------------------- 337
++NGYCK G D L + +M+ G D +T
Sbjct: 356 HLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDA 415
Query: 338 ------------YEIIIRALFEKGENDKGEKLLREMVARGL 366
YE++++ L E G+ D+ + EMV +G
Sbjct: 416 VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 147 IFNLMVKR----GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
+F ++K G +P V + ++I K +D A ++ ++ S I A N+LI
Sbjct: 147 VFRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALI 204
Query: 203 DGLCKLGRISDAWKLVNEMHH-------------RGTPPDVITYNPLLDVLCKSHNVDKA 249
+ + S+ +K+ E+ P+ T+N ++ + +
Sbjct: 205 TEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMV 264
Query: 250 IALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
+ +E++++ G P+V++Y +L++ C G + +A+++++++ ++G + AY MI
Sbjct: 265 ERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIG 324
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
G C +A L M G +TYE ++ + G+ D G + REM +G
Sbjct: 325 GLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
M E E ++ + V D+V Y T+I LC + V A +L+ +M K I +TY
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC--KEGN-VKEAKNVFAVMM 117
L+ G+C G + + + EM K + + T LV+ LC ++G V EA ++ +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 118 KQGV-KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIING 169
++ + P+ Y L+ C ++++A +I MV +G P ++Y I+G
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E+L R +KPD +TTII ++ + A + + +M + P+ VT ++I +
Sbjct: 200 EMLERG-IKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRA 258
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G + A+ L + ++ ++ TF+ L+ GN N++ M GVKPN V Y
Sbjct: 259 GNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIY 318
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L+D K +AK I+ ++ G +P+ +Y ++ + + D+A + EM
Sbjct: 319 NRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKE 378
Query: 189 EKIIADTICYNSLIDGLCKLGR-ISDAWKLVNEMHHRGT-PPDVITYNPLLDVLCKSHNV 246
+ + I YN+L+ +C R + +A+++ +M + T PD T++ L+ V S V
Sbjct: 379 KGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+A A + ++++ G +P +F T +I K ++ D F +L G
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELG 486
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 19/331 (5%)
Query: 53 PNAVTYTSLIYGFCIVGQL--QQAVGLLNEM------------ILKRM--DVEVHTFNIL 96
PN +I GF G+L Q AV LN M +L+ M EV +N+
Sbjct: 124 PNEADVCDVITGFG--GKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVT 181
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV 156
+ K ++++++ +F M+++G+KP+ ++++++ +A + F M G
Sbjct: 182 MKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGC 241
Query: 157 SPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWK 216
PD + +I+ + VD A L D +EK D + +++LI G
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 217 LVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLC 276
+ EM G P+++ YN L+D + ++ +A + K++ G P+ TY L+
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 277 KVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM-PDA 335
+ DA I++++ KG ++TV Y +++ DEA + M++ PD+
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDS 421
Query: 336 VTYEIIIRALFEKGENDKGEKLLREMVARGL 366
T+ +I G + E L +M G
Sbjct: 422 WTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
+VI YN + V KS +++K+ L E+ ++GIKPD T+T +I + G K A E F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 289 QDILIKGY---NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+ + G NVT+ A MI+ Y + G D AL+L + + DAVT+ +IR
Sbjct: 234 EKMSSFGCEPDNVTMAA---MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 346 FEKGENDKGEKLLREMVARGLLYN 369
G D + EM A G+ N
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPN 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP++V+Y +IDS+ + K A +Y +++ PN TY +L+ + A+
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 76 GLLNEM------------------------------ILKRM------DVEVHTFNILVDA 99
+ EM I + M D + TF+ L+
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
G V EA+ M + G +P +S++ Y K+V+ F+ +++ G++PD
Sbjct: 431 YACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 5/346 (1%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ P T++++ K + + + E ++R N Y + +L
Sbjct: 37 ISPPQKSLTSLVNGERNPKRIVEKFKKACE--SERFRTNIAVYDRTVRRLVAAKRLHYVE 94
Query: 76 GLLNEMILKRMDVEVHTFNILVDAL-CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+L E K D+ F + +L K G + A+ VF M + K + +S+++L+
Sbjct: 95 EILEEQK-KYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA 153
Query: 135 YCLVKEVNKAKDIFN-LMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
Y L K+ + +++FN L K + PD+ SY +I LC+ + EA LLDE+ ++ +
Sbjct: 154 YRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKP 213
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D + +N+L+ G+ ++ +M + D+ TYN L L + + L
Sbjct: 214 DIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF 273
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
E++ G+KPDVF++ +I G G++ +A+ +++I+ GY + +++ CK
Sbjct: 274 GELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKA 333
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
G + A+ L + S + T + ++ L + + ++ E++++
Sbjct: 334 GDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR- 224
II+ K M + A K+ +EM + + +N+L+ R+S + +V E+ +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY----RLSKKFDVVEELFNEL 170
Query: 225 ----GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY-TILIDGLCKVG 279
PD+++YN L+ LC+ ++ +A+AL+ EI+++G+KPD+ T+ T+L+ K G
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-G 229
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+ + +EI+ ++ K + ++ Y + G E E + L ++++SG PD ++
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 340 IIIRALFEKGENDKGEKLLREMVARG 365
+IR +G+ D+ E +E+V G
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHG 315
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 163/346 (47%), Gaps = 11/346 (3%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
T+I + + +A LY + P +V S+I + G L+ A GL E
Sbjct: 674 ATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI-RSMIDAYVRCGWLEDAYGLFMESAE 732
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
K D T +ILV+AL G +EA+++ +++ ++ +TV Y++L+ ++
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC 792
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A +I+ M GV +Q+Y +I+ + +D+A ++ + D Y ++I
Sbjct: 793 ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS---HNVDKAIALIKEIQDQG 260
K G++S+A L +EM +G P +YN ++ + S H VD+ L++ ++ G
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE---LLQAMERNG 909
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
D+ TY LI + + +A++ + KG ++ ++ +++ K G+ +EA
Sbjct: 910 RCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKG----EKLLREMV 362
KM +G PD+ I++ G+ +KG EK++R V
Sbjct: 970 RTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 162/362 (44%), Gaps = 7/362 (1%)
Query: 12 RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQL 71
RR L+ V Y ++ SL K DL+ EMV + +PPN TYT ++ + G
Sbjct: 252 RRILLSTSV--YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFK 309
Query: 72 QQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSL 131
++A+ EM E T++ ++ K G+ ++A ++ M QG+ P+ + +++
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+ Y + KA +F M + + D +II K+ + +A + +E +
Sbjct: 370 LSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNL 429
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+AD Y ++ G + A ++ M R P Y +L K NVD A
Sbjct: 430 LADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEE 489
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ + G+ PD + +++ ++ + A+ + I++ + ++ Y + YC
Sbjct: 490 AFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYC 548
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR----EMVARGLL 367
KEG+ EA LI KM R+ D + + ++ ++DK E +L +++A GL+
Sbjct: 549 KEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLM 608
Query: 368 YN 369
N
Sbjct: 609 LN 610
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 1/306 (0%)
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I F G + +A + + +I + +E T L+ ++ +KEAK ++ + +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY-LAAGES 699
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P S++D Y + A +F ++G P + +I++N L EA
Sbjct: 700 KTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ + I DT+ YN+LI + + G++ A ++ MH G P + TYN ++ V
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
+ +DKAI + + G+ D YT +I K G++ +A +F ++ KG
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+Y +M+ L E L+ ME +GR D TY +I+ E + + EK +
Sbjct: 880 PSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 361 MVARGL 366
+ +G+
Sbjct: 940 VKEKGI 945
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 19/311 (6%)
Query: 49 KRIPPNAVTY-----TSLIYGFCIVGQLQQAVGLLNEM-------ILKRMDVEVHTFNIL 96
KR P V Y +YG +V ++ GL + V +F +
Sbjct: 99 KRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDM 158
Query: 97 VDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
L ++ ++ ++ F+ M Q +P+ V Y+ ++ Y V ++ A++ F M++ G
Sbjct: 159 CVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVG 218
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK---LGRIS 212
PD + ++ + + +I+ T YN ++ L K G++
Sbjct: 219 CEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVI 278
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
D W EM G PP+ TY ++ K ++A+ E++ G P+ TY+ +I
Sbjct: 279 DLWL---EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
K G + A +++D+ +G + M++ Y K +AL+L + ME +
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIP 395
Query: 333 PDAVTYEIIIR 343
D V +IIR
Sbjct: 396 ADEVIRGLIIR 406
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D V Y T+I ++ + + A ++Y M +P + TY ++I + QL +A+ +
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ + ++ + ++ K G + EA ++F+ M K+G+KP T SY ++M C
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSY-NMMVKICAT 891
Query: 139 KEVNKAKD-IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
++ D + M + G D+ +Y +I + EA K + + + I
Sbjct: 892 SRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSH 951
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
++SL+ L K G + +A + +M G PD +L + +K I +++
Sbjct: 952 FSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMI 1011
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKD 283
++ D F +++ D VG+ +D
Sbjct: 1012 RSSVEDDRFVSSVVEDLYKAVGKEQD 1037
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 134/314 (42%), Gaps = 40/314 (12%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P + ++ID+ + + DAY L+ E K P AVT + L+ G+ ++A +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+ K ++++ +N L+ A+ + G ++ A ++ M GV + +Y++++ Y
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 138 VKEVNKAKDIFN-----------------------------------LMVKRGVSPDVQS 162
+++KA +IF+ M K+G+ P S
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y +++ ++ E +LL M D Y +LI + + ++A K + +
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVK 941
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+G P ++ LL L K+ +++A ++ + GI PD ++ G G
Sbjct: 942 EKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG--- 998
Query: 283 DAQE--IFQDILIK 294
DA++ +F + +I+
Sbjct: 999 DAEKGILFYEKMIR 1012
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 42/230 (18%)
Query: 142 NKAKDIFNLM-VKRGVSPDVQSYTIIIN---GLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +D F+ M ++ P V YTI++ + KIKM +E + + E+ E D +
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCE---PDAVA 225
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+++ + GR S + R YN +L L K K I L E+
Sbjct: 226 CGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV 285
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
++G+ P+ FTYT+++ + Y K+G +
Sbjct: 286 EEGVPPNEFTYTLVV-----------------------------------SSYAKQGFKE 310
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
EAL +M+S G +P+ VTY +I + G+ +K L +M ++G++
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 40/393 (10%)
Query: 6 AALELLRR---QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
ALE R+ ++ D V + TII S +D+ S+A+DL+ M I + S +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 63 YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV------- 115
V L Q + + +D ++HT + L+D K G +K+A+ VF+
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 116 -----------------------MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
M+ +GV P+ ++++++++ + + +
Sbjct: 597 SMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 153 KRGVSPDVQSYTIIINGL-CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
KRG S + + I + G+ + + EA L E+ S K I + + ++ G + G
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI---VLWTGMMSGHSQNGFY 713
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
+A K EM H G PD T+ +L V ++ + A+ I D T L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
ID K G +K + ++F ++ + V ++ +INGY K G ++AL + M S
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 332 MPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
MPD +T+ ++ A G+ G K+ M+ +
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 12/330 (3%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
+V P+ V +T + K L +A ++ M + P+ + + ++I + +G+L+ A
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L EM +V +N+++ K G A F M K VK + S++
Sbjct: 281 RLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+V ++ + +K G++ ++ + +++ K + ++ A K+ + + + +
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----N 392
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ +N++I G G +L +M G D T+ LL SH+++
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
I + + ++F L+D K G L+DA++IF+ + + NVT + +I Y ++
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD-NVT---WNTIIGSYVQDE 508
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRA 344
EA L +M G + D ++A
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 146/337 (43%), Gaps = 34/337 (10%)
Query: 43 YSEMVAKRIPPNAVTYTSLIYGFCIVGQ----LQQAVGLLNEMILKRMDVEVHTFNILVD 98
Y+E + + + S++ + +G+ L+ V L I TF+I++
Sbjct: 113 YAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK----FTFSIVLS 168
Query: 99 ALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSP 158
+E NV+ + + M+K G++ N+ +L+D Y ++ A+ +F + V P
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDP 224
Query: 159 DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
+ +T + +G K + +EA + + M E D + + ++I+ +LG++ DA L
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
EM + PDV+ +N ++ K AI ++ +K T ++ + V
Sbjct: 285 GEM----SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDA--- 335
L + + + G + + +++ Y K C+ KME++ ++ +A
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK---CE-------KMEAAAKVFEALEE 390
Query: 336 ---VTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
V + +IR GE+ K +L +M + G YN
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG--YN 425
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
+++A L+SE+ + P + V +T ++ G G ++A+ EM + + TF
Sbjct: 681 MTEACALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVT 737
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
++ +++E + + +++ + ++ ++L+D Y ++ + +F+ M +R
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR- 796
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
+V S+ +ING K ++A K+ D M I+ D I + ++ G++SD
Sbjct: 797 --SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 216 KLVNEM-HHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
K+ M G V ++D+L + + +A I + Q +KPD ++ L+ G
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI---EAQNLKPDARLWSSLL-G 910
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG--RM 332
C++ EI + LI+ AY ++ N Y +G ++A AL M G ++
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 333 PDAVTYEIIIRA-LFEKGENDKGE 355
P ++ R +F G+ E
Sbjct: 971 PGYSWIDVEQRTHIFAAGDKSHSE 994
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 157/393 (39%), Gaps = 48/393 (12%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
LL ++ PDVV + +I K + A + + M + T S++ IV
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
L + + E I + ++ + LV K ++ A VF + ++ N V +
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDVFW 396
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++ GY E +K ++F M G + D ++T +++ ++ + +
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+K+ + N+L+D K G + DA ++ M R D +T+N ++ + N +
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESE 512
Query: 249 AIALIKEIQ-----------------------------------DQGIKPDVFTYTILID 273
A L K + G+ D+ T + LID
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
K G +KDA+++F + +V + +I GY + L +EA+ L +M + G P
Sbjct: 573 MYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNP 627
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+T+ I+ A + G + ++ RG
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGF 660
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 128/284 (45%), Gaps = 13/284 (4%)
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+D E N +VD K V A+ F + K + +++S++ Y + + K
Sbjct: 91 IDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-----DVTAWNSMLSMYSSIGKPGKVL 145
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
F + + + P+ +++I+++ + V+ ++ M + ++ C +L+D
Sbjct: 146 RSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMY 205
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K RISDA ++ + P+ + + L K+ ++A+ + + ++D+G +PD
Sbjct: 206 AKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDH 261
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
+ +I+ ++G+LKDA+ +F ++ + V A+ VMI+G+ K G A+
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
M S T ++ A+ D G + E + GL N
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 57/396 (14%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ + A+ + + VK +VV ++++ CK + DA L+ M + N +T+T++
Sbjct: 191 GKWNEAVRVFQGMAVK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAM 245
Query: 62 IYGFCIVGQLQQAVGLLNEM----------------------------------ILKRMD 87
I G+ G + GL M ++ RM
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 88 VEVHTF--NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+E F N L+ K G + EAK VF VM + ++VS++SL+ G K++++A
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAY 361
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
++F M + D+ S+T +I G + + +L M EK D I + ++I
Sbjct: 362 ELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFG-MMPEK---DNITWTAMISAF 413
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
G +A ++M + P+ T++ +L ++ + + + + I D+
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
L+ CK G DA +IF I + +Y MI+GY G +AL L S
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ESSG+ P+ VT+ ++ A G D G K + M
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 169/380 (44%), Gaps = 64/380 (16%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKL-VSDAYDLYSEMVAKRIPPNAVTYTS 60
G+ S A ++ V+ Y +I ++ K+K + AY+L+ ++ K NAV+Y +
Sbjct: 95 GKMSKAWQVFDEMPVRV-TTSYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYAT 149
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I GF G+ +A L E +K D N+L+ + G EA VF M +
Sbjct: 150 MITGFVRAGRFDEAEFLYAETPVKFRDSVAS--NVLLSGYLRAGKWNEAVRVFQGMAVKE 207
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
V VS SS++ GYC + + A+ +F+ M +R +V ++T +I+G K ++ +
Sbjct: 208 V----VSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGF 259
Query: 181 KLLDEMHSE---KIIADTICY---------------------------------NSLIDG 204
L M E K+ ++T+ NSL+
Sbjct: 260 GLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSM 319
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
KLG + +A + M ++ D +++N L+ L + + +A L +++ + D
Sbjct: 320 YSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPGK----D 371
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
+ ++T +I G G + E+F ++ + N+T +T MI+ + G +EAL
Sbjct: 372 MVSWTDMIKGFSGKGEISKCVELF-GMMPEKDNIT---WTAMISAFVSNGYYEEALCWFH 427
Query: 325 KMESSGRMPDAVTYEIIIRA 344
KM P++ T+ ++ A
Sbjct: 428 KMLQKEVCPNSYTFSSVLSA 447
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 144/328 (43%), Gaps = 54/328 (16%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
MGE A +++ + D V + ++I L + K +S+AY+L+ +M K + V++T
Sbjct: 326 MGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTD 377
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG 120
+I GF G++ + V L M K + T+ ++ A G +EA
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEA----------- 422
Query: 121 VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
C F+ M+++ V P+ +++ +++ + + E
Sbjct: 423 --------------LCW----------FHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++ + I+ D NSL+ CK G +DA+K+ + + + P++++YN ++
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGY 514
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
+ KA+ L ++ G +P+ T+ L+ VG + + F+ + YN+
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS-MKSSYNIEP 573
Query: 301 --QAYTVMINGYCKEGLCDEALALISKM 326
Y M++ + GL D+A LIS M
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
GE S +EL + + D + +T +I + + +A + +M+ K + PN+ T++S+
Sbjct: 386 GEISKCVELFG-MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ + L + + + ++ + ++ N LV CK GN +A +F+ +
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI----S 500
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+PN VSY++++ GY KA +F+++ G P+ ++ +++ + VD WK
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 182 LLDEMHSE-KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
M S I Y ++D L + G + DA L++ M + P + LL
Sbjct: 561 YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCK---PHSGVWGSLLSA- 616
Query: 241 CKSH-NVDKAIALIKEIQDQGIKPDVFT-YTILIDGLCKVGRLKDAQEI 287
K+H VD A K++ + ++PD T Y +L +G+ +D I
Sbjct: 617 SKTHLRVDLAELAAKKLIE--LEPDSATPYVVLSQLYSIIGKNRDCDRI 663
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/347 (18%), Positives = 163/347 (46%), Gaps = 36/347 (10%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
I ++ + +A ++ +M + I V++ ++I + G++ +A + +EM ++
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSKAWQVFDEMPVR-- 110
Query: 87 DVEVHTFNILVDALCKEG-NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
++N ++ A+ K ++ +A +F + ++ N VSY++++ G+ ++A+
Sbjct: 111 --VTTSYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAE 164
Query: 146 DIFNLMVKRGVSP----DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
++ +P D + ++++G + +EA ++ M +++++ C +S+
Sbjct: 165 FLY------AETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS---C-SSM 214
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG- 260
+ G CK+GRI DA L + M R +VIT+ ++D K+ + L ++ +G
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
+K + T ++ R ++ +I + + +++ Y K G EA
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
A+ M++ D+V++ +I L ++ + + +L +M + ++
Sbjct: 331 AVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMV 373
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 146/289 (50%), Gaps = 3/289 (1%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
ALE+++ V+ D + Y+TII + L + A + + M + P+ VTY++++ +
Sbjct: 209 ALEMVKDG-VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
G++++ + L + + F++L + G+ + V M VKPN V
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
Y++L++ + A+ +FN M++ G++P+ ++ T ++ K + +A +L +EM
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR-GTPPDVITYNPLLDVLCKSHN 245
++K D I YN+L++ +G +A +L N+M PD +Y +L++
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
+KA+ L +E+ G++ +V T L+ L K R+ D +F D+ IK
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF-DLSIK 495
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 15/281 (5%)
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
VT SL +G Q Q + EM+ ++++ T++ ++ + +A F
Sbjct: 191 VTMKSLRFG----RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER 246
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M K G+ P+ V+YS+++D Y +V + ++ V G PD +++++ +
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
D +L EM S + + + YN+L++ + + G+ A L NEM G P+ T
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ + K+ A+ L +E++ + D Y L++ +G ++A+ +F D+
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM---- 422
Query: 296 YNVTVQ------AYTVMINGYCKEGLCDEALALISKMESSG 330
+VQ +YT M+N Y G ++A+ L +M +G
Sbjct: 423 -KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
M+K GV+ + ++YS+++ NKA + F M K G+ PD +Y+ I++ K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
V+E L + + D I ++ L + G ++ EM P+V+ YN
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
LL+ + ++ A +L E+ + G+ P+ T T L+ K +DA ++++++ K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR-MPDAVTYEIIIRALFEKGENDKG 354
+ + Y ++N GL +EA L + M+ S + PD +Y ++ G+ +K
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 355 EKLLREMVARGLLYN 369
+L EM+ G+ N
Sbjct: 452 MELFEEMLKAGVQVN 466
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 113/237 (47%)
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
T+ Y+ M ++ +++ MVK GV D +Y+ II + + ++A + +
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
M+ ++ D + Y++++D K G++ + L G PD I ++ L + ++
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYT 304
+ D +++E++ +KP+V Y L++ + + G+ A+ +F ++L G + T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
++ Y K +AL L +M++ D + Y ++ + G ++ E+L +M
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 38/181 (20%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP+VV+Y T+++++ + A L++EM+ + PN T T+L+ + + A+
Sbjct: 322 VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV--KPNTVSYSSLMD 133
L EM K+ ++ +N L++ G +EA+ +F M K+ V +P+ SY+++++
Sbjct: 382 QLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAMLN 440
Query: 134 GY-----------------------------CLVKEVNKAKDI------FNLMVKRGVSP 158
Y CLV+ + KAK I F+L +KRGV P
Sbjct: 441 IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Query: 159 D 159
D
Sbjct: 501 D 501
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMH----HRGTPPDVITYNPLLDVLCKSHNVDKA 249
+TI YN + L R ++L+ EM G D ITY+ ++ + + +KA
Sbjct: 185 ETIFYNVTMKSL----RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKA 240
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
I + + G+ PD TY+ ++D K G++++ +++ + G+ A++V+
Sbjct: 241 IEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKM 300
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+ + G D ++ +M+S P+ V Y ++ A+ G+ L EM+ GL N
Sbjct: 301 FGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQ----DQGIKPDVFTYTILIDGLCKVGRLK 282
P + I YN V KS + LI+E+ G++ D TY+ +I +
Sbjct: 183 PMETIFYN----VTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 238
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
A E F+ + G Y+ +++ Y K G +E L+L + ++G PDA+ + ++
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 343 RALFEKGENDKGEKLLREM 361
+ E G+ D +L+EM
Sbjct: 299 KMFGEAGDYDGIRYVLQEM 317
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 164/384 (42%), Gaps = 47/384 (12%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
L +P + + II ++ DA +YS M R+ P++ T+ L+ + LQ
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 75 VGLLNEMILKRMDVEVH---------------------------------TFNILVDALC 101
+ ++ D +V ++ +V A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG--VSPD 159
+ G EA +F+ M K VKP+ V+ S+++ + ++++ + + I +VK G + PD
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 160 VQSYTIIINGL-CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLV 218
+ I +N + K V A L D+M S +I +N++I G K G +A +
Sbjct: 259 L---LISLNTMYAKCGQVATAKILFDKMKSPNLI----LWNAMISGYAKNGYAREAIDMF 311
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
+EM ++ PD I+ + + ++++A ++ + + + DVF + LID K
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTY 338
G ++ A+ +F L + V ++ MI GY G EA++L ME G P+ VT+
Sbjct: 372 GSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 339 EIIIRALFEKGENDKGEKLLREMV 362
++ A G +G M
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMA 451
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 14/307 (4%)
Query: 6 AALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
A ++L ++ P+++++ +I K+ +A D++ EM+ K + P+ ++ TS I
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 66 CIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
VG L+QA + + +V + L+D K G+V+ A+ VF + + V
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV---- 389
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V +S+++ GY L +A ++ M + GV P+ ++ ++ MV E W +
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M KI Y +ID L + G + A++++ M P V + LL CK H
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALLSA-CKKH- 504
Query: 246 VDKAIALIKEIQDQ--GIKPDVFTYTILIDGLCKVGRLKD-AQEIFQDILIKGYNVTVQA 302
+ + L + Q I P + + + L RL D E+ + KG N V
Sbjct: 505 --RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562
Query: 303 YTVMING 309
V + G
Sbjct: 563 SWVEVRG 569
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 6/203 (2%)
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH 223
T +I+ + A ++ D++ +I +N++I G + DA + + M
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
PD T+ LL ++ + ++ G DVF LI K RL
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
A+ +F+ + + T+ ++T +++ Y + G EAL + S+M PD V ++
Sbjct: 173 ARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 344 ALFEKGENDKGEKLLREMVARGL 366
A + +G + +V GL
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGL 253
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 88 VEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
V + L+ L +EG VKEA F M + KP+ +Y+++++ C V KA+ +
Sbjct: 163 VTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 148 FNLMVKRGV--SPDVQSYTIIINGLCKIKM-----------VDEAWKLLDEMHSEKIIAD 194
+ M G PD +YTI+I+ C+ M + EA ++ EM + D
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+ YN LIDG CK RI A +L +M +G P+ +TYN + ++ ++ AI +++
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMR 342
Query: 255 EIQDQGIK-PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
++ G P TYT LI L + R +A+++ +++ G Y ++ + E
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSE 402
Query: 314 GLC---DEAL 320
GL DE L
Sbjct: 403 GLASTLDEEL 412
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 124 NTVSYSSLMDGYCLVKE--VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
T S + LM CL +E V +A F M + PDV +Y IIN LC++ +A
Sbjct: 164 TTASITCLMK--CLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 182 LLDEMH--SEKIIADTICYNSLIDGLCKLG-----------RISDAWKLVNEMHHRGTPP 228
LLD+M + DT Y LI C+ G R+ +A ++ EM RG P
Sbjct: 222 LLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVP 281
Query: 229 DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIF 288
DV+TYN L+D CK++ + +A+ L ++++ +G P+ TY I ++ A E+
Sbjct: 282 DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Query: 289 QDILIKGYNVT-VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+ + G+ V YT +I+ + EA L+ +M +G +P TY+++ AL
Sbjct: 342 RTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSS 401
Query: 348 KG 349
+G
Sbjct: 402 EG 403
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 23/260 (8%)
Query: 40 YDLYSEMVAKRIPPNAVTYTSLIYGFCIV------GQLQQAVGLLNEMILKRMDVEVHTF 93
+D ++ + N VT S+ C++ G +++A+ M +V+ +
Sbjct: 147 WDFLRQVSRRENGKNVVTTASIT---CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAY 203
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVK--PNTVSYSSLMDGYC-----------LVKE 140
N +++ALC+ GN K+A+ + M G + P+T +Y+ L+ YC + +
Sbjct: 204 NTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRR 263
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
+ +A +F M+ RG PDV +Y +I+G CK + A +L ++M ++ + + + YNS
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTP-PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
I I A +++ M G P TY PL+ L ++ +A L+ E+ +
Sbjct: 324 FIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
Query: 260 GIKPDVFTYTILIDGLCKVG 279
G+ P +TY ++ D L G
Sbjct: 384 GLVPREYTYKLVCDALSSEG 403
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEM--VAKRIPPNAVTYTS 60
E A ++ KPDV Y TII++LC+ A L +M R PP+ TYT
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 61 LIYGFCIVG-----------QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEA 109
LI +C G ++ +A + EM+ + +V T+N L+D CK + A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 110 KNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS-PDVQSYTIIIN 168
+F M +G PN V+Y+S + Y + E+ A ++ M K G P +YT +I+
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIH 362
Query: 169 GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
L + + EA L+ EM ++ Y + D L G S L E+H R
Sbjct: 363 ALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAST---LDEELHKR 415
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 133 DGYCLVKEVNKAKDIFNLM---VKRGVSPDV---QSYTIIINGLCKIKMVDEAWKLLDEM 186
D CL+ + N K +++ + +R +V S T ++ L + V EA M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG--TPPDVITYNPLLDVLCK-- 242
D YN++I+ LC++G A L+++M G PPD TY L+ C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 243 ---------SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
+ +A + +E+ +G PDV TY LIDG CK R+ A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR-MPDAVTYEIIIRALFEKGEND 352
KG Y I Y + A+ ++ M+ G +P + TY +I AL E
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 353 KGEKLLREMVARGLL 367
+ L+ EMV GL+
Sbjct: 372 EARDLVVEMVEAGLV 386
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP---LLDVLCKS 243
H+E D C L K W + ++ R +V+T L+ L +
Sbjct: 125 HNEITCRDMACL------LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEE 178
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG--YNVTVQ 301
V +A+A +++ KPDV+ Y +I+ LC+VG K A+ + + + G Y
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 302 AYTVMINGYCKEGL---CDEALA--------LISKMESSGRMPDAVTYEIIIRALFEKGE 350
YT++I+ YC+ G+ C +A+ + +M G +PD VTY +I +
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 351 NDKGEKLLREMVARGLLYN 369
+ +L +M +G + N
Sbjct: 299 IGRALELFEDMKTKGCVPN 317
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 159/346 (45%), Gaps = 18/346 (5%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ ++T++I ++ + DA+ ++ + + + V+YT+LI G+ G ++ A L
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV----VSYTALIKGYASRGYIENAQKLF 223
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+E+ +K +V ++N ++ + GN KEA +F MMK V+P+ + +++
Sbjct: 224 DEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ + + + G +++ +I+ K ++ A L + + + D I +
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISW 335
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD--KAIALIKEI 256
N+LI G + +A L EM G P+ +T +L +D + I + +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 257 QDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC 316
+ +G+ T LID K G ++ A ++F IL K ++ ++ MI G+ G
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRA 451
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
D + L S+M G PD +T+ ++ A G D G + R M
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 15/356 (4%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYD--LYSEMVAKRI-PPNAVTYT 59
+T +L ++ Q++K + + L + ++S ++ Y+ V K I PN + +
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++ G + A+ L MI + +TF ++ + K KE + + ++K
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G + ++SL+ Y + A +F+ R DV SYT +I G ++ A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENA 219
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
KL DE+ + D + +N++I G + G +A +L +M PD T ++
Sbjct: 220 QKLFDEI----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+S +++ + I D G ++ LID K G L+ A +F+ + K
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----D 331
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
V ++ +I GY L EAL L +M SG P+ VT I+ A G D G
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 14/287 (4%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G ALEL + + V+PD T++ + + + ++ + N
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+LI + G+L+ A GL + K +V ++N L+ KEA +F M++
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR--GVSPDVQSYTIIINGLCKIKMV 176
G PN V+ S++ + ++ + I + KR GV+ T +I+ K +
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+ A ++ + + + + + +N++I G GR ++ L + M G PD IT+ L
Sbjct: 421 EAAHQVFNSILHKSLSS----WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476
Query: 237 LDVLCKSHNVDKAIALIKEI-QDQGIKPDVFTYTILIDGLCKVGRLK 282
L S +D + + + QD + P + Y +ID L G K
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 15/226 (6%)
Query: 112 VFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
+F VM + + +T Y+ ++ G C + ++A +IF ++ G+ PDVQ+Y ++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVI 231
+ + A KL EM ++ DTI YNS+I GLCK +++ A K+
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 232 TYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
T+N L++ CK+ V + L E+ +GI +V TYT LI G +VG A +IFQ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
+ G + + ++ C +A+A++ ++ S + + VT
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+F +M + + D Y III+GLCK DEA + + + D YN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
LGR A KL EM RG PD ITYN ++ LCK + K Q + +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQN---------KLAQARKVSKSCS 107
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
T+ LI+G CK R+KD +F ++ +G V YT +I+G+ + G + AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 327 ESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
S+G ++T+ I+ L + E K +L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 42 LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC 101
++ M + + Y +I+G C G+ +A + +++ + +V T+N+++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
+ ++ A+ ++A M+++G+ P+T++Y+S++ G C ++ +A R VS
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEM 221
++ +ING CK V + L EM+ I+A+ I Y +LI G ++G + A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 222 HHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
G IT+ +L LC + KA+A++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++PDV Y +I + + A LY+EM+ + + P+ +TY S+I+G C +L QA
Sbjct: 45 LQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA- 99
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+++ TFN L++ CK VK+ N+F M ++G+ N ++Y++L+ G+
Sbjct: 100 --------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
V + N A DIF MV GV ++ I+ LC K + +A +L + S
Sbjct: 152 RQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSS 204
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M + DT YN +I GLCK G+ +A + + G PDV TYN ++ + +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ +A L E+ +G+ PD TY +I GLCK +L A+++ + + +
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNT 111
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
+INGYCK + + L +M G + + +TY +I + G+ + + +EMV+ G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 366 L 366
+
Sbjct: 172 V 172
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+L + + V + T+I+ CK V D +L+ EM + I N +TYT+LI+GF V
Sbjct: 95 KLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV 154
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
G A+ + EM+ + TF ++ LC +++A V ++ K + N V+
Sbjct: 155 GDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA--VAMLLQKSSMVSNNVT 211
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 165/348 (47%), Gaps = 19/348 (5%)
Query: 8 LELLRRQL-VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
ELLR QL KP+V +Y +I L K K A++L+ EM+ + N YT+L+ +
Sbjct: 137 FELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYS 196
Query: 67 IVGQLQQAVGLLNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G+ A LL M +VHT++IL+ + + + +++ + M +QG++PNT
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNT 256
Query: 126 VSYSSLMDGYCLVKE-VNKAKDIFNLMVKRGVSPDVQSYTI-----IINGLCKIKMVDEA 179
++Y++L+D Y K V + ++ + PD S+T+ G +I+M++
Sbjct: 257 ITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPD--SWTMNSTLRAFGGNGQIEMMENC 314
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLG---RISDAWKLVNEMHHRGTPPDVITYNPL 236
+ ++ S I + +N L+D K G ++S + + + H+ T ++TYN +
Sbjct: 315 Y---EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWT---IVTYNVV 368
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
+D ++ ++ + L + +Q + I P T L+ + + + + I
Sbjct: 369 IDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDI 428
Query: 297 NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+ + + +++ Y + E ++ ME G PD +TY +++A
Sbjct: 429 RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 4/289 (1%)
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
Q LL E + + +V ++ I++ CK+ ++A +F M+ +G N Y++L+
Sbjct: 135 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQP--EKAHELFQEMINEGCVVNHEVYTALV 192
Query: 133 DGYCLVKEVNKAKDIFNLM-VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
Y + A + M PDV +Y+I+I ++ D+ LL +M + I
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 192 IADTICYNSLIDGLCKLGRISD-AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+TI YN+LID K + L+ + PD T N L + ++
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
++ Q GI+P++ T+ IL+D K G K + + + Y+ T+ Y V+I+ +
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
+ G + L M+S P VT ++RA + DK +LR
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAVTYTSLIYGFCIVG 69
+RRQ ++P+ + Y T+ID+ K K+ + +M+ + P++ T S + F G
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
Q++ + ++ + TFNIL+D+ K GN K+ V M K V+Y+
Sbjct: 307 QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYN 366
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
++D + ++ + + +F LM + P + ++ + D+ +L + +
Sbjct: 367 VVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENS 426
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
I D + +N L+D ++ + ++ ++ M +G PD ITY ++ K++ +
Sbjct: 427 DIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV----KAYRISGM 482
Query: 250 IALIKEIQ 257
+KE+
Sbjct: 483 TTHVKELH 490
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 107 KEAKNVFAVMMKQ-GVKPNTVSYSSL--MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
+ A VF ++ +Q KPN Y L M G C K+ KA ++F M+ G + + Y
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKC--KQPEKAHELFQEMINEGCVVNHEVY 188
Query: 164 TIIINGLCKIKMVDEAWKLLDEM-HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
T +++ + D A+ LL+ M S D Y+ LI ++ L+++M
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 223 HRGTPPDVITYNPLLDVLCKSH-NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRL 281
+G P+ ITYN L+D K+ V+ LI+ + + KPD +T + G++
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 282 KDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
+ + ++ G ++ + ++++ Y K G + A++ M+ VTY ++
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 368
Query: 342 IRALFEKGENDKGEKLLREM 361
I A G+ + E L R M
Sbjct: 369 IDAFGRAGDLKQMEYLFRLM 388
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 247 DKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
+ AI + + +++Q KP+V Y LI L K + + A E+FQ+++ +G V + YT
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 306 MINGYCKEGLCDEALALISKMESSGR-MPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
+++ Y + G D A L+ +M+SS PD TY I+I++ + DK + LL +M +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 365 GLLYN 369
G+ N
Sbjct: 251 GIRPN 255
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 5 SAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYG 64
SA +E +++ +V Y +ID+ + + L+ M ++RI P+ VT SL+
Sbjct: 347 SAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRA 406
Query: 65 FCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ + + G+L + + +++ FN LVDA + E K V +M K+G KP+
Sbjct: 407 YGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPD 466
Query: 125 TVSYSSLMDGY 135
++Y +++ Y
Sbjct: 467 KITYRTMVKAY 477
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 169/374 (45%), Gaps = 54/374 (14%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+ VMY +++ L ++ DA L+ M ++V++ ++I G G ++A+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
EM ++ + ++ + F ++ A G + E K + A +++ + + S+L+D YC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLL--------------- 183
K ++ AK +F+ M ++ +V S+T ++ G + +EA K+
Sbjct: 319 KCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 184 ----------------DEMHSEKIIADTICY----NSLIDGLCKLGRISDAWKLVNEMHH 223
+ H + I + I Y NSL+ K G I D+ +L NEM+
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
R D +++ ++ + + I L ++ G+KPD T T +I + G ++
Sbjct: 435 R----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 284 AQEIFQDILIKGYNV--TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEII 341
Q F+ ++ Y + ++ Y+ MI+ + + G +EA+ I+ M PDA+ + +
Sbjct: 491 GQRYFK-LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PDAIGWTTL 546
Query: 342 IRALFEKGENDKGE 355
+ A KG + G+
Sbjct: 547 LSACRNKGNLEIGK 560
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 135/310 (43%), Gaps = 13/310 (4%)
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
N V Y SL+ G G ++ A+ L + M+ + ++ ++ L + G KEA F
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
M QG+K + + S++ + +N+ K I +++ + + +I+ CK
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
K + A + D M + +++ + +++ G + GR +A K+ +M G PD T
Sbjct: 319 KCLHYAKTVFDRMKQKNVVS----WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
+ ++++ + G+ V L+ K G + D+ +F ++ +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
+ ++T M++ Y + G E + L KM G PD VT +I A G +K
Sbjct: 435 R----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 354 GEKLLREMVA 363
G++ + M +
Sbjct: 491 GQRYFKLMTS 500
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 165/396 (41%), Gaps = 65/396 (16%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIP-PNAVTYTSLIYGFCIVGQL 71
R L P+ +Y I+ + K + Y+ V RIP PN ++ +L+ +
Sbjct: 34 RALPYPETFLYNNIVHAYALMKSST-----YARRVFDRIPQPNLFSWNNLLLAY------ 82
Query: 72 QQAVGLLNEM---ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVS 127
GL++EM K D + T+N+L++ G V A + MM+ V+
Sbjct: 83 -SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL----CKIKMVDEAWKLL 183
+++ V+ K I ++K G +SY ++ + L + + +A K+
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGF----ESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 184 DEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
+ +T+ YNSL+ GL G I DA +L RG D +++ ++ L ++
Sbjct: 198 YGLDDR----NTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQN 248
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI--------FQDILIKG 295
+AI +E++ QG+K D + + ++ +G + + ++I FQD + G
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 296 YNV-----------------------TVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
+ V ++T M+ GY + G +EA+ + M+ SG
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLY 368
PD T I A ++G + + + GL++
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 166/423 (39%), Gaps = 90/423 (21%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPP-NAVTYTSLIYGFCIVGQLQ 72
++ +P++ + ++ + K L+S+ E +++P + VT+ LI G+ + G +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEM-----ESTFEKLPDRDGVTWNVLIEGYSLSGLVG 120
Query: 73 QAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKP-------- 123
AV N M+ ++ T ++ G+V K + ++K G +
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 124 -----------------------NTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
NTV Y+SLM G + A +F RG+ D
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDS 235
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
S+ +I GL + + EA + EM + + D + S++ LG I++ ++
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
+ + + L+D+ CK K + K + D+ + +V ++T ++ G + GR
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKC----KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR 351
Query: 281 LKDAQEIFQDILIKG-------------------------------------YNVTVQAY 303
++A +IF D+ G + VTV
Sbjct: 352 AEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
V + G C G D++ L ++M + DAV++ ++ A + G + +L +MV
Sbjct: 412 LVTLYGKC--GDIDDSTRLFNEMN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 364 RGL 366
GL
Sbjct: 466 HGL 468
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 168/359 (46%), Gaps = 15/359 (4%)
Query: 16 VKPDVVMYTTIIDS---LCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
+ P+++ Y I + + K ++ + Y L+ + + P+ T+ L+ G L+
Sbjct: 161 IAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAP--LNPSIATFRILVKGLVSNDNLE 218
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ--GVKPNTVSYSS 130
+A+ + +M +K V+ ++ L+ K + ++ + ++ G + V Y
Sbjct: 219 KAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQ 278
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRG--VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
LM GY + + +A + + V V +Y ++ L + DEA KL D +
Sbjct: 279 LMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKK 338
Query: 189 EK-----IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
E + + +N +++G C G+ +A ++ +M PD +++N L++ LC +
Sbjct: 339 EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDN 398
Query: 244 HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAY 303
+ +A L E++++ +KPD +TY +L+D K G++ + ++ ++ + Y
Sbjct: 399 ELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVY 458
Query: 304 TVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ + K G D+A + M S +M D Y+ I+RAL E G D+ K++ EM+
Sbjct: 459 NRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK--RIPPNAVTYTSLIYGFCIVGQLQQAVG 76
D V+Y+ ++ K+ LY E+ K + V Y L+ G+ + ++A+
Sbjct: 235 DPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAME 294
Query: 77 LLNEMILKRMDVEVHT--FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
E + + V + +N +++AL + G EA +F + K+ P
Sbjct: 295 CYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP----------- 343
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
R ++ ++ ++ +++NG C +EA ++ +M K D
Sbjct: 344 -------------------RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPD 384
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
T+ +N+L++ LC +++A KL EM + PD TY L+D K +D+ A K
Sbjct: 385 TLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYK 444
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
+ + ++P++ Y L D L K G+L DA+ F D+++ + +AY ++ + G
Sbjct: 445 TMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAG 503
Query: 315 LCDEALALISKM--ESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
DE L ++ +M + + R+ + + E + L + G EKL+ E
Sbjct: 504 RLDEMLKIVDEMLDDDTVRVSEELQ-EFVKEELRKGGREGDLEKLMEE 550
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 155/358 (43%), Gaps = 10/358 (2%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P + T++ + + L+ + I PN +TY + + V + + A+
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 77 LLNEMILKR-MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
I ++ + TF ILV L N+++A + M +G + V YS LM G
Sbjct: 187 HYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGC 246
Query: 136 CLVKEVNKAKDIFNLMVKR--GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE--KI 191
+ + ++ + ++ G D Y ++ G +M EA + +E E K+
Sbjct: 247 VKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKV 306
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP-----DVITYNPLLDVLCKSHNV 246
+ YN +++ L + G+ +A KL + + PP ++ T+N +++ C
Sbjct: 307 RMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
++A+ + +++ D PD ++ L++ LC L +A++++ ++ K Y ++
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
++ KEG DE A M S P+ Y + L + G+ D + MV++
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 138/325 (42%), Gaps = 45/325 (13%)
Query: 90 VHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN 149
+ T N ++ A ++ + + + G+ PN ++Y+ + Y V++ A + +
Sbjct: 130 IFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYK 189
Query: 150 LMVKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKL 208
L + ++P + ++ I++ GL +++A ++ ++M + + D + Y+ L+ G K
Sbjct: 190 LFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKN 249
Query: 209 GRISDAWKLVNEMHHR--GTPPD------------------------------------- 229
KL E+ + G D
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMS 309
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP-----DVFTYTILIDGLCKVGRLKDA 284
+ YN +L+ L ++ D+A+ L ++ + P ++ T+ ++++G C G+ ++A
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 285 QEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
E+F+ + + ++ ++N C L EA L +ME PD TY +++
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 345 LFEKGENDKGEKLLREMVARGLLYN 369
F++G+ D+G + MV L N
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPN 454
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 152/329 (46%), Gaps = 2/329 (0%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVA-KRIPPNAVTYTSL 61
+ S E++ + +KP + +YT++I K +L+ A+ M + P+ T+T L
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVL 221
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
I C +G+ ++ EM + T+N ++D K G +E ++V A M++ G
Sbjct: 222 ISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGD 281
Query: 122 K-PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAW 180
P+ + +S++ Y + + K + ++ GV PD+ ++ I+I K M +
Sbjct: 282 SLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMC 341
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++D M T+ YN +I+ K GRI + +M ++G P+ ITY L++
Sbjct: 342 SVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAY 401
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K+ V K +++++I + + D + +I+ + G L +E++ + +
Sbjct: 402 SKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDK 461
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESS 329
+ MI Y G+ D L +M SS
Sbjct: 462 ITFATMIKTYTAHGIFDAVQELEKQMISS 490
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 160/363 (44%), Gaps = 11/363 (3%)
Query: 8 LELLRRQ-LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
LLR+Q +P YT + L K A L+ M+++ + P YTSLI +
Sbjct: 131 FNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYG 190
Query: 67 IVGQLQQAVGLLNEM-ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
L +A L M + +V TF +L+ CK G K++ M GV +T
Sbjct: 191 KSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCST 250
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS-PDVQSYTIII----NGLCKIKMVDEAW 180
V+Y++++DGY + + + M++ G S PDV + II NG KM E+W
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM--ESW 308
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ D +N LI K G +++ M R +TYN +++
Sbjct: 309 --YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
K+ ++K + ++++ QG+KP+ TY L++ K G + + + I+ +
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLRE 360
+ +IN Y + G L +ME PD +T+ +I+ G D ++L ++
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 361 MVA 363
M++
Sbjct: 487 MIS 489
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 97 VDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
+D KE + A +F ++ KQ +P +Y+ L K+ ++A +F +M+ G
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS-EKIIADTICYNSLIDGLCKLGRISDA 214
+ P + YT +I+ K +++D+A+ L+ M S D + LI CKLGR
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE-IQDQGIKPDVFTYTILID 273
+V EM + G +TYN ++D K+ ++ +++ + I+D PDV T +I
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
++ + + + G + + ++I + K G+ + +++ ME
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
VTY I+I + G +K + + R+M +G+ N
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 134/303 (44%), Gaps = 44/303 (14%)
Query: 104 GNVKE---AKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS--- 157
GN K+ A +F VM+ +G+KP Y+SL+ Y + ++KA M + VS
Sbjct: 155 GNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM--KSVSDCK 212
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKL 217
PDV ++T++I+ CK+ D ++ EM + T+ YN++IDG K G + +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 218 VNEM--------------------------------HHR----GTPPDVITYNPLLDVLC 241
+ +M + R G PD+ T+N L+
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 242 KSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQ 301
K+ K +++ ++ + TY I+I+ K GR++ ++F+ + +G
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 302 AYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
Y ++N Y K GL + +++ ++ +S + D + II A + G+ ++L +M
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 362 VAR 364
R
Sbjct: 453 EER 455
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KPDV +T +I CK + EM + + VTY ++I G+ G ++
Sbjct: 212 KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMES 271
Query: 77 LLNEMI------------------------LKRMDV------------EVHTFNILVDAL 100
+L +MI +++M+ ++ TFNIL+ +
Sbjct: 272 VLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 101 CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
K G K+ +V M K+ TV+Y+ +++ + + K D+F M +GV P+
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
+Y ++N K +V + +L ++ + ++ DT +N +I+ + G ++ +L +
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
M R PD IT+ ++ K++ ++E++ Q I D+
Sbjct: 452 MEERKCKPDKITFATMI----KTYTAHGIFDAVQELEKQMISSDI 492
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 10/326 (3%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDA-LCKEGNVKEA 109
IP N V Y+ LI GQ + A+ L +EM + +N L+ A L K
Sbjct: 130 IPDNGV-YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 110 KNVFAVMMK-QGV---KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI 165
+ V + K +G+ +PN V+Y+ L+ + +V++ +F + VSPDV ++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
+++ K M+ E +L M S + D I +N LID K + +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 226 TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT--ILIDGLCKVGRLKD 283
P + T+N ++ K+ +DKA + K++ D P TY I++ G C G +
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSR 366
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
A+EIF+++ + M+ YC+ GL EA L + PDA TY+ + +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 344 ALFEKGENDKGEKLLREMVARGLLYN 369
A + ++ + L+++M G++ N
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 8/285 (2%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK-----RIPP 53
G+T A+ L ++ +PD +Y +I + + + A + + K R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
N VTY L+ F G++ Q L ++ + + +V+TFN ++DA K G +KE + V
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
M KP+ ++++ L+D Y +E K + F +++ P + ++ +I K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+M+D+A + +M+ I I Y +I G +S A ++ E+ T
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
N +L+V C++ +A L + PD TY L K
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 5/322 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV----GQLQQ 73
PD +Y+ +I + K A L+SEM P+A Y +LI L++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 74 AVGLLNEMI-LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
G L++M ++R V T+NIL+ A + G V + +F + V P+ +++ +M
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
D Y + + + + M PD+ ++ ++I+ K + ++ + + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+NS+I K I A + +M+ P ITY ++ + +V +A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+E+ + T +++ C+ G +A ++F + + Y + Y K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 313 EGLCDEALALISKMESSGRMPD 334
+ ++ L+ KME G +P+
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPN 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P+VV Y ++ + + V L+ ++ + P+ T+ ++ + G +++
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+L M ++ TFN+L+D+ K+ ++ + F +M+ KP +++S++ Y
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYT--IIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ ++KA+ +F M P +Y I++ G C V A ++ +E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
N++++ C+ G +A KL + PD TY L K+ ++ L+K
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 255 EIQDQGIKPD 264
+++ GI P+
Sbjct: 443 KMEKDGIVPN 452
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 153/310 (49%), Gaps = 20/310 (6%)
Query: 42 LYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALC 101
L+++++ + + + LI + Q AV + N++ + VH N L+ A
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV----QEPNVHLCNSLIRAHA 93
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
+ +A VF+ M + G+ + +Y L+ + K + N + K G+S D+
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 162 SYTIIIN--GLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
+I+ C V +A KL ++M SE+ DT+ +NS++ GL K G + DA +L +
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKM-SER---DTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
EM R D+I++N +LD + + KA L +++ ++ + +++ ++ G K G
Sbjct: 210 EMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAG 261
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
++ A+ +F + + NV +T++I GY ++GL EA L+ +M +SG DA
Sbjct: 262 DMEMARVMFDKMPLPAKNVVT--WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 340 IIIRALFEKG 349
I+ A E G
Sbjct: 320 SILAACTESG 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLM 151
++N ++ L K G +++A+ +F M ++ + +S+++++DGY +E++KA ++F M
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 152 VKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRI 211
+R + S++ ++ G K ++ A + D+M + + + +I G + G +
Sbjct: 243 PER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLL 296
Query: 212 SDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTIL 271
+A +LV++M G D +L +S + + + ++ + + + L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 272 IDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGR 331
+D K G LK A ++F DI K + ++ M++G G EA+ L S+M G
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 332 MPDAVTYEIIIRALFEKGENDKG 354
PD VT+ ++ + G D+G
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEG 435
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 34/310 (10%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDAL--CKEGNVKEAKNVFAVMMKQGVKPNTV 126
L Q L ++I + + ++H L+ AL C++ N+ A VF Q +PN
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVF----NQVQEPNVH 83
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+SL+ + + +A +F+ M + G+ D +Y ++ C ++W + +M
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA-CS----GQSWLPVVKM 138
Query: 187 ---HSEKI--IADTICYNSLIDGLCKLGR--ISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
H EK+ +D N+LID + G + DA KL +M R D +++N +L
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGG 194
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
L K+ + A L E+ + D+ ++ ++DG + + A E+F+ + + T
Sbjct: 195 LVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERN---T 247
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
V +++ M+ GY K G + A + KM + + VT+ III EKG + ++L+
Sbjct: 248 V-SWSTMVMGYSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 360 EMVARGLLYN 369
+MVA GL ++
Sbjct: 305 QMVASGLKFD 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 147/331 (44%), Gaps = 83/331 (25%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK------------ 49
GE A L ++ + D++ + T++D + + +S A++L+ +M +
Sbjct: 199 GELRDARRLFD-EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGY 257
Query: 50 --------------RIP---PNAVTYTSLIYGFCIVGQLQQAVGLLNEM----------- 81
++P N VT+T +I G+ G L++A L+++M
Sbjct: 258 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAA 317
Query: 82 ----------------------ILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVMM 117
ILKR ++ + N L+D K GN+K+A +VF +
Sbjct: 318 VISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
K+ + VS+++++ G + +A ++F+ M + G+ PD ++ ++ ++D
Sbjct: 378 KK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 178 EAWKLLDEMHSEKIIADTIC----YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
E +D +S + + D + Y L+D L ++GR+ +A K+V M P+V+ +
Sbjct: 434 EG---IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIW 487
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
LL C+ HN + + KE+ D +K D
Sbjct: 488 GALLGA-CRMHN---EVDIAKEVLDNLVKLD 514
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 10/326 (3%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDA-LCKEGNVKEA 109
IP N V Y+ LI GQ + A+ L +EM + +N L+ A L K
Sbjct: 130 IPDNGV-YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 110 KNVFAVMMK-QGV---KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI 165
+ V + K +G+ +PN V+Y+ L+ + +V++ +F + VSPDV ++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
+++ K M+ E +L M S + D I +N LID K + +
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 226 TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT--ILIDGLCKVGRLKD 283
P + T+N ++ K+ +DKA + K++ D P TY I++ G C G +
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSR 366
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
A+EIF+++ + M+ YC+ GL EA L + PDA TY+ + +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 344 ALFEKGENDKGEKLLREMVARGLLYN 369
A + ++ + L+++M G++ N
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 8/285 (2%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAK-----RIPP 53
G+T A+ L ++ +PD +Y +I + + + A + + K R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 54 NAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF 113
N VTY L+ F G++ Q L ++ + + +V+TFN ++DA K G +KE + V
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI 173
M KP+ ++++ L+D Y +E K + F +++ P + ++ +I K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 174 KMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITY 233
+M+D+A + +M+ I I Y +I G +S A ++ E+ T
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 234 NPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
N +L+V C++ +A L + PD TY L K
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 5/322 (1%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV----GQLQQ 73
PD +Y+ +I + K A L+SEM P+A Y +LI L++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 74 AVGLLNEMI-LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
G L++M ++R V T+NIL+ A + G V + +F + V P+ +++ +M
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
D Y + + + + M PD+ ++ ++I+ K + ++ + + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
+NS+I K I A + +M+ P ITY ++ + +V +A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 253 IKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCK 312
+E+ + T +++ C+ G +A ++F + + Y + Y K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 313 EGLCDEALALISKMESSGRMPD 334
+ ++ L+ KME G +P+
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPN 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+P+VV Y ++ + + V L+ ++ + P+ T+ ++ + G +++
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+L M ++ TFN+L+D+ K+ ++ + F +M+ KP +++S++ Y
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYT--IIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ ++KA+ +F M P +Y I++ G C V A ++ +E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
N++++ C+ G +A KL + PD TY L K+ ++ L+K
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 255 EIQDQGIKPD 264
+++ GI P+
Sbjct: 443 KMEKDGIVPN 452
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 24/343 (6%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
+V + ++ K K + +A + M + + V++ ++I G+ G++ +A L +
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFD 274
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
E ++ +V T+ +V + V+EA+ +F M ++ N VS+++++ GY +
Sbjct: 275 ESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGE 326
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ AK++F++M R VS ++ +I G + + EA L D+M D + +
Sbjct: 327 RMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWA 378
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
++I G + G +A +L +M G + +++ L ++ L +
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
G + F L+ CK G +++A ++F+++ K + ++ MI GY + G + A
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVA 494
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
L M+ G PD T ++ A G DKG + M
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 174/376 (46%), Gaps = 63/376 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPP-NAVTYTSLIYGFCIVGQLQQAVGL 77
D+ + I S + ++A ++ KR+P ++V+Y +I G+ G+ + A L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVF-----KRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 78 LNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
+EM + ++ ++N+++ + N+ +A+ +F +M ++ V S+++++ GY
Sbjct: 118 FDEMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQ 169
Query: 138 VKEVNKAKDIFNLMVKRG-------VSPDVQ--------------------SYTIIINGL 170
V+ A+ +F+ M ++ +S VQ S+ ++ G
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP-PD 229
K K + EA + D M+ + D + +N++I G + G+I +A +L +E +P D
Sbjct: 230 VKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDE-----SPVQD 280
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
V T+ ++ ++ V++A +E+ D+ + + ++ ++ G + R++ A+E+F
Sbjct: 281 VFTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 290 DILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKG 349
+ + V + MI GY + G EA L KM D V++ +I + G
Sbjct: 337 VMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSG 388
Query: 350 ENDKGEKLLREMVARG 365
+ + +L +M G
Sbjct: 389 HSFEALRLFVQMEREG 404
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 141/326 (43%), Gaps = 53/326 (16%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ A +L V+ DV +T ++ ++++V +A +L+ +M + N V++ ++
Sbjct: 264 GKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAM 318
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ G+ +++ A L + M + V T+N ++ + G + EAKN+F M K+
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR-- 372
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT----------------- 164
+ VS+++++ GY +A +F M + G + S++
Sbjct: 373 --DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 165 --------------IIINGL----CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+ N L CK ++EA L EM + I++ +N++I G
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS----WNTMIAGYS 486
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEI-QDQGIKPDV 265
+ G A + M G PD T +L + VDK + QD G+ P+
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDI 291
Y ++D L + G L+DA + +++
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 82 ILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEV 141
+LK D ++ +N+ + + + G EA VF M + ++VSY+ ++ GY E
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEF 111
Query: 142 NKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSL 201
A+ +F+ M +R D+ S+ ++I G + + + +A +L + M D +N++
Sbjct: 112 ELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTM 163
Query: 202 IDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGI 261
+ G + G + DA + + M + + +++N LL ++ +++A L K ++ +
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 262 KPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALA 321
++ L+ G K ++ +A++ F + ++ V ++ +I GY + G DEA
Sbjct: 220 ----VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQ 271
Query: 322 LISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVAR 364
L + + D T+ ++ + ++ +L +M R
Sbjct: 272 LFDESP----VQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 58 YTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
+ S+I + G+ + V + M + ++ T + + L + ++ A++ F++M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 118 KQGVKPNTV-SYSSLMDGYCLVKEVNKAKDIFNLM-VKRGVSPDVQSYTIIINGLCKIKM 175
+ G+ TV S + ++ C E+ +A+++ M + +GV ++ ++ +I K
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+E +L M E ++ D Y LIDG G++ +A +LV MH + + YN
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
+++ + V+K I L E+ +G+ P+ TY +L++GLCK G++ +A ++ +
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+ + + Y+ + + G+ D++L ++++M G +P A E + +LFE
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFE 433
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 93 FNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMV 152
FN ++ G E VF M VK + + + + ++ A+D F+LMV
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 153 KRGVSP-DVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK-IIADTICYNSLIDGLCKLGR 210
+ G+ V S T+++ LC + A +L++EM K + A+ + + S+I K
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+ ++ M D+ +Y L+D V++A L+ + D+ ++ + + Y +
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+++G + G ++ E++ ++ +G Y V++NG CK G EA++ ++++ +
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 331 RMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLL 367
D Y + + G DK +++ EM+ G +
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI 418
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 2 GETSAALELLRR----QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKR-IPPNAV 56
GE + A EL+ + VK ++V + ++I C + + DL +++ K + +
Sbjct: 224 GEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEKESVMLDLD 282
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
+Y LI GF G++++A L+ M K++ VE + +N++++ + G V++ +++ M
Sbjct: 283 SYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEM 342
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+GV PN +Y LM+G C +V +A N + D + Y+ + ++ M+
Sbjct: 343 SSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMI 402
Query: 177 DEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
D++ +++ EM + I L D L ++ R
Sbjct: 403 DKSLEVVAEMIRDGFIPGATICERLADSLFEVNR 436
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 142/313 (45%), Gaps = 16/313 (5%)
Query: 56 VTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAV 115
V++ + + FC + ++ + + ++ FN + + N E ++F
Sbjct: 60 VSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE 119
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+++ G+ P+ ++ SL+ + K + + + + L +K G+ +V +IN + +
Sbjct: 120 ILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED 179
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
VD A + D + + +CYN++I G + R ++A L EM + P+ IT
Sbjct: 180 VDSARCVFDRI----VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT--- 232
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTY----TILIDGLCKVGRLKDAQEIFQDI 291
LL VL S + ++ L K I K Y T LID K G L DA IF+ +
Sbjct: 233 LLSVL-SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
Query: 292 LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEN 351
K QA++ MI Y G ++++ + +M S PD +T+ ++ A G
Sbjct: 292 RYKD----TQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 352 DKGEKLLREMVAR 364
++G K +MV++
Sbjct: 348 EEGRKYFSQMVSK 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 23/240 (9%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
++V+P VV Y +I + ++A L+ EM K + PN +T S++ ++G L
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD- 247
Query: 74 AVGLLNEMILKRMDVEVHTF-------NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
L + I K + H+F L+D K G++ +A ++F M + +T
Sbjct: 248 ----LGKWIHKY--AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK----DTQ 297
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
++S+++ Y + K+ +F M V PD ++ ++N V+E K +M
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 187 HSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
S+ I +I Y S++D L + G + DA++ ++++ TP + + LL C SHN
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP---MLWRILL-AACSSHN 413
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 128/315 (40%), Gaps = 36/315 (11%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
L + +PD+V++ ++ + + + L+ E++ I P+ T+ SL+ +
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 71 LQQAVGL------------------LNEMILKRMDVE-------------VHTFNILVDA 99
L++ L L M + DV+ V +N ++
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
+ EA ++F M + +KPN ++ S++ L+ ++ K I K
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
V+ T +I+ K +D+A + ++M + DT ++++I G+ + +
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKV 278
M PD IT+ LL+ + V++ ++ + GI P + Y ++D L +
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 279 GRLKDAQEIFQDILI 293
G L+DA E + I
Sbjct: 381 GNLEDAYEFIDKLPI 395
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 37/383 (9%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+V Y +++ L K+ + YD+ +EM+ + + PN T + + FC G + +A+ L
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++N L+ LC +V++A +V + +G ++S+L + C
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ + A+++ +R + P + II+ LC + V++A + + + + +
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMF 535
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK---------------- 242
SLI G L R A KL+ M +G P Y ++ +C+
Sbjct: 536 TSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQ 595
Query: 243 ----SHNVD---------------KAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLK 282
H V K L+ ++ D+ GI P V + +++ K ++
Sbjct: 596 LSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
DA F D+ +G + Y VMI G CK D+A+ + +M+ G P YE+ I
Sbjct: 656 DALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Query: 343 RALFEKGENDKGEKLLREMVARG 365
+ L + + D+ L+ E G
Sbjct: 715 QKLCNEEKYDEAVGLVNEFRKSG 737
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 166/399 (41%), Gaps = 42/399 (10%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G T AL+ +R + + D Y ++++L ++K D++D+ + ++ R AVT+
Sbjct: 196 GRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCF-DSFDVIFDQISVRGFVCAVTH 254
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF----- 113
+ L+ FC G+L +A L ++ ILVDALC + +EA +
Sbjct: 255 SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKL 314
Query: 114 --------------AVMMKQGVKPNTVSYS---SLMDG------------YCLVKEVN-- 142
++K G N + S ++G + L+KE N
Sbjct: 315 VGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLD 374
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
DI M+ RGVSP+ ++ + CK VDEA +L + YN LI
Sbjct: 375 GVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
LC + A+ ++ RG T++ L + LC D A L+ ++ +
Sbjct: 435 HTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLL 494
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
P +I LC VG+++DA I + G + + + +T +I G D A L
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 323 ISKMESSGRMPDAVTYEIIIRAL--FEKGENDKGEKLLR 359
I +M+ G P Y +I+ + E GE + LL+
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLK 593
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 2/309 (0%)
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
+L+ G+ + G+ A+ M + +D++ +++L++AL +E +F + +
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G V++S L+ +C ++++A+D ++ + I+++ LC + EA
Sbjct: 247 GF-VCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHH-RGTPPDVITYNPLLD 238
KLLDE+ + YN I L K G +++ + ++ G +V YN ++
Sbjct: 306 TKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVF 365
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L K +N+D ++ E+ +G+ P+ T + CK G + +A E+++ G+
Sbjct: 366 QLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAP 425
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
T +Y +I+ C ++A ++ G T+ + AL KG+ D +L+
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
Query: 359 REMVARGLL 367
R LL
Sbjct: 486 IAAAERDLL 494
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 11/340 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
EL + V M+T++I A L M K P Y ++I C +
Sbjct: 521 ELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEM 580
Query: 69 --GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
G+ LL + L + +V +N+ ++ G K A+ V+ +M + G+ P
Sbjct: 581 ESGEKNFFTTLL-KFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVA 639
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
S ++ Y +++ A F+ + ++G + + Y ++I GLCK +D+A L+EM
Sbjct: 640 SNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEM 698
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
E + CY I LC + +A LVNE G N LL KS V
Sbjct: 699 KGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGV 758
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI--FQDILIKGYNVTVQAYT 304
+A ++ I+D+ P++ + LI GL GR+ E+ +++ K Y + + Y
Sbjct: 759 YEAWTRMRNIEDK--IPEMKSLGELI-GLFS-GRIDMEVELKRLDEVIEKCYPLDMYTYN 814
Query: 305 VMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
+++ ++A ++ ++ G +P+ T I+ RA
Sbjct: 815 MLLRMIVMNQ-AEDAYEMVERIARRGYVPNERTDMILERA 853
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 18/350 (5%)
Query: 6 AALELLRRQLVKP------DVVMYTTIIDSLCKDKLVSDAYD---LYSEMVAKRIPPNAV 56
+AL + R +P DVV+Y T I SLC +++ Y+ ++ M +
Sbjct: 194 SALRMFRELEREPKRRSCFDVVLYNTAI-SLCGR--INNVYETERIWRVMKGDGHIGTEI 250
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
TY+ L+ F G+ + A+ + +EM+ ++ + ++ A KE A +F M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMV 176
+K+G+KPN V+ ++L++ +V +++++ G PD ++ ++ L K
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 177 DEAWKLLDEMHSEKIIA-DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
++ +L D + SE + + YN+ + KLG A KL+ EM G +YN
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
++ KS A+ + + + + KP+ FTY L+ C G L D E DIL K
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEVE---DIL-KK 485
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
V Y I+G C A L KM G PD T ++++ L
Sbjct: 486 VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 165/371 (44%), Gaps = 8/371 (2%)
Query: 6 AALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI 62
+ALEL +R ++P+ + + L ++ + A+ ++ E + K+ TY+ ++
Sbjct: 125 SALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGHTYSLML 183
Query: 63 YGFCIVGQLQQAVGLLNEMIL---KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
V + A+ + E+ +R +V +N + + NV E + ++ VM
Sbjct: 184 KAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGD 243
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G ++YS L+ + A D+++ MV +S + +I+ K + D A
Sbjct: 244 GHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLA 303
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K+ M + + + + N+LI+ L K G++ +K+ + + G PD T+N LL
Sbjct: 304 LKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTA 363
Query: 240 LCKSHNVDKAIALIKEIQDQGIKP-DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
L K++ + + L I+ + + + + Y + K+G + A ++ ++ G V
Sbjct: 364 LYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTV 423
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ +Y ++I+ K AL + M P+ TY ++R+ D+ E +L
Sbjct: 424 STSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL 483
Query: 359 REMVARGLLYN 369
+++ LYN
Sbjct: 484 KKVEPDVSLYN 494
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 165/342 (48%), Gaps = 9/342 (2%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV-- 68
++R +KPDVV Y T++ K V + Y E++ + +P N + S++YG +
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIK---VKNGYPKAIELIGE-LPHNGIQMDSVMYGTVLAIC 247
Query: 69 ---GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNT 125
G+ ++A + +M ++ ++ ++ L+++ +G+ K+A + M G+ PN
Sbjct: 248 ASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNK 307
Query: 126 VSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
V ++L+ Y ++++++ + + G + + Y ++++GL K ++EA + D+
Sbjct: 308 VMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDD 367
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M + + +D + +I LC+ R +A +L + D++ N +L C++
Sbjct: 368 MKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGE 427
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
++ + ++K++ +Q + PD T+ ILI K A + D+ KG+ + + +
Sbjct: 428 MESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSS 487
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
+I K EA ++ + + S R +E I+ L +
Sbjct: 488 LIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQ 529
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 141/306 (46%), Gaps = 2/306 (0%)
Query: 57 TYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVM 116
TY+S I F + +A+ + + + + V+ N ++ L K G + +F M
Sbjct: 134 TYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQM 192
Query: 117 MKQGVKPNTVSYSSLMDGYCLVKE-VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
+ G+KP+ V+Y++L+ G VK KA ++ + G+ D Y ++
Sbjct: 193 KRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
+EA + +M E + Y+SL++ G A +L+ EM G P+ +
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
LL V K D++ L+ E++ G + Y +L+DGL K G+L++A+ IF D+ KG
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
A ++MI+ C+ EA L E++ D V ++ A GE +
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 356 KLLREM 361
+++++M
Sbjct: 433 RMMKKM 438
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 155/332 (46%), Gaps = 2/332 (0%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
+Q K V Y++ I K VS A ++Y + + N S++ G+L
Sbjct: 125 QQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLD 183
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGN-VKEAKNVFAVMMKQGVKPNTVSYSSL 131
+ L ++M + +V T+N L+ K N +A + + G++ ++V Y ++
Sbjct: 184 SCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTV 243
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKI 191
+ +A++ M G SP++ Y+ ++N +A +L+ EM S +
Sbjct: 244 LAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGL 303
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIA 251
+ + + +L+ K G + +L++E+ G + + Y L+D L K+ +++A +
Sbjct: 304 VPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARS 363
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
+ +++ +G++ D + +I+I LC+ R K+A+E+ +D + M+ YC
Sbjct: 364 IFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYC 423
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
+ G + + ++ KM+ PD T+ I+I+
Sbjct: 424 RAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 145/300 (48%), Gaps = 3/300 (1%)
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+ ++Q++ L+ + ++V N+++ G ++ +F M + G K + +
Sbjct: 76 ISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVST 134
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
YSS + + K V+KA +I+ + +V I++ L K +D KL D+M
Sbjct: 135 YSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMK 193
Query: 188 SEKIIADTICYNSLIDGLCKLGR-ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ + D + YN+L+ G K+ A +L+ E+ H G D + Y +L + +
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRS 253
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
++A I++++ +G P+++ Y+ L++ G K A E+ ++ G T +
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ Y K GL D + L+S++ES+G + + Y +++ L + G+ ++ + +M +G+
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
+F M + G V +Y+ I K V +A ++ + E + NS++ L
Sbjct: 119 QLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCL 176
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN-VDKAIALIKEIQDQGIKPD 264
K G++ KL ++M G PDV+TYN LL K N KAI LI E+ GI+ D
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMD 236
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALIS 324
Y ++ GR ++A+ Q + ++G++ + Y+ ++N Y +G +A L++
Sbjct: 237 SVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT 296
Query: 325 KMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
+M+S G +P+ V +++ + G D+ +LL E+ + G N
Sbjct: 297 EMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAEN 341
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 177/381 (46%), Gaps = 63/381 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+VV +T ++ ++ +V +A L+ M + N V++T + G G++ +A L
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ M +K DV T ++ LC+EG V EA+ +F M ++ N V++++++ GY
Sbjct: 165 DMMPVK--DVVASTN--MIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQN 216
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
V+ A+ +F +M ++ S+T ++ G +++A + + M + +IA C
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA---C- 268
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N++I G ++G IS A ++ + M R D T+ ++ + +A+ L ++Q
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 259 QGIKP-----------------------------------DVFTYTILIDGLCKVGRLKD 283
QG++P DV+ ++L+ K G L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR 343
A+ +F K + + +I+GY GL +EAL + +M SSG MP+ VT I+
Sbjct: 385 AKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 344 ALFEKGENDKGEKLLREMVAR 364
A G+ ++G ++ M ++
Sbjct: 441 ACSYAGKLEEGLEIFESMESK 461
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 55/326 (16%)
Query: 68 VGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVS 127
+G++ +A + + K + ++N +V G KEA+ +F M ++ N VS
Sbjct: 30 IGKINEARKFFDSLQFK----AIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVS 81
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMH 187
++ L+ GY + + +A+++F LM +R +V S+T ++ G + MV EA L M
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 188 SEKIIADTICYNSLID---------------------------GLCKLGRISDAWKLVNE 220
++ T+ + LID GLC+ GR+ +A + +E
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M R +V+T+ ++ +++ VD A L + + + K +V ++T ++ G GR
Sbjct: 198 MRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPE---KTEV-SWTSMLLGYTLSGR 249
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
++DA+E F+ + +K V A MI G+ + G +A + ME D T+
Sbjct: 250 IEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRG 301
Query: 341 IIRALFEKGENDKGEKLLREMVARGL 366
+I+A KG + L +M +G+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGV 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 143/331 (43%), Gaps = 59/331 (17%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEM----------------------VAKRI----- 51
DVV T +I LC++ V +A ++ EM VA+++
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 52 PPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM------------------------- 86
V++TS++ G+ + G+++ A M +K +
Sbjct: 231 EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 87 --DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKA 144
D + T+ ++ A ++G EA ++FA M KQGV+P+ S S++ + +
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 145 KDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDG 204
+ + +V+ DV ++++ K + +A + D S+ D I +NS+I G
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISG 406
Query: 205 LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG-IKP 263
G +A K+ +EM GT P+ +T +L + +++ + + + ++ + + P
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP 466
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
V Y+ +D L + G++ A E+ + + IK
Sbjct: 467 TVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D + +I + + +A DL+++M + + P+ + S++ + LQ +
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++ + D +V+ ++L+ K G + +AK VF + + + ++S++ GY
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI----IMWNSIISGYASH 410
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI-C 197
+A IF+ M G P+ + I+ ++E ++ + M S+ + T+
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN-VDKAIALIKEI 256
Y+ +D L + G++ A +L+ M PD + LL CK+H+ +D A K++
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGA-CKTHSRLDLAEVAAKKL 526
Query: 257 QDQGIKPD-VFTYTIL 271
+ +PD TY +L
Sbjct: 527 FEN--EPDNAGTYVLL 540
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 170/380 (44%), Gaps = 60/380 (15%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
Q V +T+ I+ L ++ +++A +S+M + PN +T+ +L+ G +
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 74 AVG-LLN----EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
A+G LL+ ++ L R V V T ++ K G K+A+ VF M + N+V++
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGT--AIIGMYSKRGRFKKARLVFDYMEDK----NSVTW 143
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++DGY +V+ A +F+ M +R D+ S+T +ING K +EA EM
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 189 EKIIADTIC-----------------------------------YNSLIDGLCKLGRISD 213
+ D + NSLID C+ G +
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEF 259
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
A ++ M R V+++N ++ + N +++ +++Q++G KPD T+T +
Sbjct: 260 ARQVFYNMEKR----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 315
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVT--VQAYTVMINGYCKEGLCDEALALISKMESSGR 331
VG +++ FQ I+ Y ++ ++ Y +++ Y + G ++AL L+ M
Sbjct: 316 ACSHVGLVEEGLRYFQ-IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK-- 372
Query: 332 MPDAVTYEIIIRALFEKGEN 351
P+ V ++ A G N
Sbjct: 373 -PNEVVIGSLLAACSNHGNN 391
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD--IFNLMVKR 154
++ L + G + EA F+ M GV+PN +++ +L+ G ++A + K
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 155 GVSPD-VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
G+ + V T II K +A + D M + +++ +N++IDG + G++ +
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDN 158
Query: 214 AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD--------- 264
A K+ ++M R D+I++ +++ K ++A+ +E+Q G+KPD
Sbjct: 159 AAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 265 -------------VFTYTI-------------LIDGLCKVGRLKDAQEIFQDILIKGYNV 298
V Y + LID C+ G ++ A+++F ++ +
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR---- 270
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
TV ++ +I G+ G E+L KM+ G PDAVT+ + A G ++G +
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 359 REM 361
+ M
Sbjct: 331 QIM 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 51/307 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+ V + T+ID + V +A ++ +M + + +++T++I GF G ++A+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL----ISWTAMINGFVKKGYQEEALLWF 194
Query: 79 NEMILK----------------------RMDVEVHTF-------------NILVDALCKE 103
EM + + VH + N L+D C+
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSY 163
G V+ A+ VF M K+ V VS++S++ G+ +++ F M ++G PD ++
Sbjct: 255 GCVEFARQVFYNMEKRTV----VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 164 TIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMH 222
T + + +V+E + M + I+ I Y L+D + GR+ DA KLV M
Sbjct: 311 TGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP 370
Query: 223 HRGTPPDVITYNPLLDVLCKSH--NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
+ P+ + LL C +H N+ A L+K + D +K Y IL + G+
Sbjct: 371 MK---PNEVVIGSLL-AACSNHGNNIVLAERLMKHLTDLNVKSHS-NYVILSNMYAADGK 425
Query: 281 LKDAQEI 287
+ A ++
Sbjct: 426 WEGASKM 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 41/195 (21%)
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL------- 237
+ H++ T+ + S I+ L + GR+++A K ++M G P+ IT+ LL
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 238 -------DVL----CK----SHNVDKAIALIKEIQDQGI------------KPDVFTYTI 270
D+L CK ++V A+I +G + T+
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 271 LIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSG 330
+IDG + G++ +A ++F + + + ++T MING+ K+G +EAL +M+ SG
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 331 RMPDAVTYEIIIRAL 345
PD Y II AL
Sbjct: 202 VKPD---YVAIIAAL 213
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 163/363 (44%), Gaps = 27/363 (7%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKD-KLVSDAYDLYSEMVAKRIP-PNAVTYT 59
G+ AL + K + + + +++ + KD + +A+ L+ E IP P+ +Y
Sbjct: 75 GDIDGALRVFHGMRAK-NTITWNSLLIGISKDPSRMMEAHQLFDE-----IPEPDTFSYN 128
Query: 60 SLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++ + ++A + M K + ++N ++ + G +++A+ +F MM++
Sbjct: 129 IMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
N VS+++++ GY ++ KA F + RGV ++T +I G K K V+ A
Sbjct: 185 ----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKKVELA 236
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
+ +M K + + +N++I G + R D KL M G P+ + L
Sbjct: 237 EAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
+ + + + + + DV T LI CK G L DA ++F+ + K
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----D 349
Query: 300 VQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLR 359
V A+ MI+GY + G D+AL L +M + PD +T+ ++ A G + G
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 360 EMV 362
MV
Sbjct: 410 SMV 412
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 143/328 (43%), Gaps = 21/328 (6%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D + T+I + + A +L+ M+ K N V++ ++I G+ G L++A
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFF 209
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
++ V + ++ K V+ A+ +F M V N V++++++ GY
Sbjct: 210 KVAPVR----GVVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVEN 262
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+F M++ G+ P+ + + G ++ + ++ + + D
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
SLI CK G + DAWKL M + DV+ +N ++ + N DKA+ L +E+ D
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQA--YTVMINGYCKEGLC 316
I+PD T+ ++ G + F+ +++ Y V Q YT M++ + G
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFES-MVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 317 DEALALISKMESSGRMPDAVTYEIIIRA 344
+EAL LI M P A + ++ A
Sbjct: 438 EEALKLIRSMPFR---PHAAVFGTLLGA 462
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 14/247 (5%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
A + + V ++V + +I ++ D L+ M+ + I PN+ +S + G
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 67 IVGQLQQAVGLLNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ LQ +G I+ + + +V L+ CK G + +A +F VM K+ V
Sbjct: 296 ELSALQ--LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV--- 350
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
V++++++ GY +KA +F M+ + PD ++ ++ +V+ +
Sbjct: 351 -VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 185 EM-HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS 243
M K+ Y ++D L + G++ +A KL+ M R P + LL C+
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR---PHAAVFGTLLGA-CRV 465
Query: 244 H-NVDKA 249
H NV+ A
Sbjct: 466 HKNVELA 472
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 15/322 (4%)
Query: 43 YSEMVAKRI-PPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVH--TFNILVDA 99
Y+ +V RI N + ++I GF + A+ + +M+ V+ T+ + A
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
+ G ++ + + +++K+G++ ++ ++++ Y + +A IF M+ D
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI----GFD 191
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
V ++ +I G K ++D+A L DEM + + +NS+I G + GR DA +
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVG 279
EM + PD T LL+ ++ + + I + + T LID CK G
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 280 RLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
+++ +F+ K + + MI G G + A+ L S++E SG PD+V++
Sbjct: 308 CIEEGLNVFECAPKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 340 IIIRALFEKGENDKGEKLLREM 361
++ A GE + ++ R M
Sbjct: 364 GVLTACAHSGEVHRADEFFRLM 385
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 147/314 (46%), Gaps = 17/314 (5%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
VKP + Y ++ + + D L+ ++ + + ++ ++++ + G L +A
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
+ MI +V +N ++ K G + +A+N+F M ++ N VS++S++ G+
Sbjct: 182 RIFLGMI----GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGF 233
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
A D+F M ++ V PD + ++N + ++ + + + + ++
Sbjct: 234 VRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNS 293
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT-YNPLLDVLCKSHNVDKAIALIK 254
I +LID CK G I + + P ++ +N ++ L + ++A+ L
Sbjct: 294 IVVTALIDMYCKCGCIEEGLNVF-----ECAPKKQLSCWNSMILGLANNGFEERAMDLFS 348
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV--TVQAYTVMINGYCK 312
E++ G++PD ++ ++ G + A E F+ ++ + Y + +++ YT+M+N
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR-LMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 313 EGLCDEALALISKM 326
GL +EA ALI M
Sbjct: 408 AGLLEEAEALIKNM 421
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 48/283 (16%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
++ DVV + ++I K L+ A +L+ EM + N V++ S+I GF G+ + A
Sbjct: 187 MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDA 242
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
+ + EM K + + T L++A G ++ + + +++ + N++ ++L+D
Sbjct: 243 LDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDM 302
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
YC + + ++F K+ +S
Sbjct: 303 YCKCGCIEEGLNVFECAPKKQLS------------------------------------- 325
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKS---HNVDKAIA 251
C+NS+I GL G A L +E+ G PD +++ +L S H D+
Sbjct: 326 --CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 252 LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
L+KE I+P + YT++++ L G L++A+ + +++ ++
Sbjct: 384 LMKE--KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE 424
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
++ + + V + ++I ++ DA D++ EM K + P+ T SL+ +G +Q
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNV--------------------- 112
+ ++ R ++ L+D CK G ++E NV
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 113 ----------FAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQ 161
F+ + + G++P++VS+ ++ EV++A + F LM ++ + P ++
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 162 SYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
YT+++N L +++EA L+ M E+ DT+ ++SL+ K+G + A
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEE---DTVIWSSLLSACRKIGNVEMA 446
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 137/290 (47%), Gaps = 9/290 (3%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
LR++ D ++ + ++L K DA ++ + P + T T++I C G
Sbjct: 129 LRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGH 188
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+++A+G+++ E+ + L+ + NVKEA+ V M G+ P+ ++S
Sbjct: 189 VKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNS 248
Query: 131 LMDGYCLVKEVNK--------AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
L+ C + VN+ A +I M + P SY I+++ L + + V E+ ++
Sbjct: 249 LLTCLC-ERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQI 307
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
L++M DT Y ++ L GR ++V+EM RG P+ Y L+ VLC
Sbjct: 308 LEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCG 367
Query: 243 SHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
V+ A+ L ++++ + Y +LI LCK G + +E++++ L
Sbjct: 368 VERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 138/294 (46%), Gaps = 7/294 (2%)
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
LL+++ + ++ TF+I+ + L K G ++A +F ++ K + + ++++ C
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTI 196
V +A + + ++ Y ++ G + V EA +++ +M S I D
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 197 CYNSLIDGLCKL-------GRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
C+NSL+ LC+ G + +A ++ EM P ++YN LL L ++ V ++
Sbjct: 245 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 304
Query: 250 IALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
++++++ G PD +Y ++ L GR +I +++ +G+ + Y +I
Sbjct: 305 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGV 364
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
C + AL L KM+ S Y+++I L + G +KG +L E ++
Sbjct: 365 LCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 159 DVQSYTIIINGLCKIKMVDEA---WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
D Q+++I+ L K+ ++A +K+LD+ + D ++I LC G + A
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQ---DGFTVTAIISALCSRGHVKRAL 193
Query: 216 KLVNEMHHRGTPPDVIT------YNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYT 269
+ MHH DVI+ Y LL NV +A +I++++ GI PD+F +
Sbjct: 194 GV---MHHH---KDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFN 247
Query: 270 ILIDGLCKVGRLKDAQEIFQDIL-----IKGYNV--TVQAYTVMINGYCKEGLCDEALAL 322
L+ LC+ ++ + + L ++ Y + T +Y ++++ + E+ +
Sbjct: 248 SLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQI 307
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ +M+ SG PD +Y ++R L+ G KG +++ EM+ RG
Sbjct: 308 LEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 167/370 (45%), Gaps = 24/370 (6%)
Query: 5 SAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSD---AYDLYSEMVAKR---IPPNAVTY 58
S AL +LR Q+ P V +Y T+I S+ + + A+ LY ++++ R + PN TY
Sbjct: 57 SYALSILR-QIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI---LVDALCKEGNVKEAKNVFAV 115
SL Q + L+ +LK ++ H + LV G ++EA+++F
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-K 174
+ +P+ ++++L+ Y +E++ +++ L ++ V P+ S +I + +
Sbjct: 176 IR----EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGE 231
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
V W + + + + SLID K G +S A K+ +EM R DV YN
Sbjct: 232 FVRGVWAHVYVL-KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR----DVSCYN 286
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LI 293
++ L + I L K + QG+ PD T+ + I G + + +IF + +
Sbjct: 287 AMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAV 346
Query: 294 KGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDK 353
G V+ Y +++ + G +EA I KM P+A + + + G+ ++
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK---PNATLWRSFLGSSQTHGDFER 403
Query: 354 GEKLLREMVA 363
GE L+ ++
Sbjct: 404 GEIALKHLLG 413
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 116/233 (49%), Gaps = 9/233 (3%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
L + ++V Y T +D C++ A+ L SE+ + + +A T+ SL+ G VG +++
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
+ ++++ + N L+ K G++ A VF M + N +S++S++
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMIT 548
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KII 192
G+ + + FN M++ GV P+ +Y I++ + +V E W+ + M+ + KI
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
Y ++D LC+ G ++DA++ +N M + DV+ + L C+ H+
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGA-CRVHS 657
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 11/283 (3%)
Query: 82 ILKRM-DVEVHTFNILVDALCKEGNVK-EAKNVFAVMMKQG-VKPNTVSYSSLMDGYCLV 138
+ RM D V ++ L+ K N+ EA N+F+ M+ QG V+PN ++SS +
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+ K + KRG++ + +I+ K +++A + + + + +++ Y
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS----Y 442
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N+ +DG C+ A+KL++E+ R T+ LL + ++ K + ++
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
G+ + LI K G + A +F + N V ++T MI G+ K G
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFM----ENRNVISWTSMITGFAKHGFAIR 558
Query: 319 ALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
L ++M G P+ VTY I+ A G +G + M
Sbjct: 559 VLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 43/279 (15%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
+ +R L V ++I K + DA + + K N V+Y + + G C
Sbjct: 398 QAFKRGLASNSSVA-NSVISMFVKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRN 452
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
+QA LL+E+ + + V TF L+ + G++++ + + + ++K G+ N
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++L+ Y ++ A +FN M R +V S+T +I G K + ++M
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
E + + + Y +++ +G +S+ W+ N M+
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY-------------------------- 602
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
+D IKP + Y ++D LC+ G L DA E
Sbjct: 603 --------EDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 68 VGQLQQAVGLLNEMI---LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
G L+ AV L+ M ++ MD TF+ L+ + + + + K V A +++ ++P+
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSV--TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
+V Y+SL+ Y + KA+D+F M + G DV S++ ++ +A K+
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 185 EMHSEKIIADTICYNSLIDG-----LCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
E ++ + CY ++I +GR++ + L+ H DV L+D+
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF-LMKTGHFES---DVCVGCSLIDM 211
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGY 296
K N + ++ D+ + +V T+T++I ++G ++A F D+++ G+
Sbjct: 212 FVKGEN---SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 28/350 (8%)
Query: 26 IIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR 85
++D K ++ +A ++S M K + V++ +++ G+ +G+ + AV L +M ++
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDV----VSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+ ++V T++ + + G EA V M+ G+KPN V+ S++ G V + K
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 146 DIFNLMVKRGVSPDVQSY---TIIINGL----CKIKMVDEAWKLLDEMHSEKIIADTICY 198
+I +K + + ++IN L K K VD A + D + ++ D + +
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--RDVVTW 443
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRG--TPPDVITYNPLLDVLCKSHNVDKAIALIKEI 256
+I G + G + A +L++EM T P+ T + L V C S A+ + K+I
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL-VACASL---AALRIGKQI 499
Query: 257 QDQGIKPD-----VFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYC 311
++ +F LID K G + DA+ +F +++ K VT +T ++ GY
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN-EVT---WTSLMTGYG 555
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
G +EAL + +M G D VT +++ A G D+G + M
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 21/317 (6%)
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+ LI + VG L AV LL D V+ +N L+ + G + +F +M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRR--FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
P+ ++ + + V + L + G +V ++ + + + +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR-GTPPDVITYNPLL 237
A K+ DEM + D + +NS+I+ KLG+ A ++ + M + G PD IT L+
Sbjct: 181 ARKVFDEMS----VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT---LV 233
Query: 238 DVL--CKS---HNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDIL 292
+VL C S H++ K + + + I+ ++F L+D K G + +A +F ++
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFA-VTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 293 IKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGEND 352
+K V ++ M+ GY + G ++A+ L KM+ D VT+ I ++G
Sbjct: 292 VK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 353 KGEKLLREMVARGLLYN 369
+ + R+M++ G+ N
Sbjct: 348 EALGVCRQMLSSGIKPN 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 127/281 (45%), Gaps = 14/281 (4%)
Query: 89 EVHTFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
+V ++N ++++ K G K A +F+ M + G +P+ ++ +++ + + K +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
V + ++ +++ K M+DEA + M + D + +N+++ G +
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNAMVAGYSQ 307
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
+GR DA +L +M DV+T++ + + +A+ + +++ GIKP+ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 268 YTILIDGLCKVGRLKDAQEIFQ-------DILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
++ G VG L +EI D+ G+ +I+ Y K D A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
A+ + R D VT+ ++I + G+ +K +LL EM
Sbjct: 428 AMFDSLSPKER--DVVTWTVMIGGYSQHGDANKALELLSEM 466
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 104 GNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIF-NLMVKRGVSPDVQS 162
G + A+ VF M ++ K +S+++L++ K+ + + IF L K + PDV S
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
Y +I GLC EA L+DE+ ++ + D I +N L+ G+ + ++ M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
+ D+ +YN L L + ++ ++L +++ +KPDVFT+T +I G G+L
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+A +++I G + ++ CK G + A L ++ + + D + ++
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 343 RALFEKGENDKGEKLL 358
AL + + D+ E+++
Sbjct: 360 DALVKGSKQDEAEEIV 375
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 134/285 (47%), Gaps = 4/285 (1%)
Query: 9 ELLRRQLVKPDVV---MYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF 65
E+L Q P++ II+ + + +A ++ EM + A+++ +L+
Sbjct: 92 EILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNAC 151
Query: 66 CIVGQLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPN 124
+ G+ E+ K ++ +V ++N L+ LC +G+ EA + + +G+KP+
Sbjct: 152 VNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD 211
Query: 125 TVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLD 184
++++ L+ + + + I+ MV++ V D++SY + GL +E L D
Sbjct: 212 HITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFD 271
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
++ ++ D + ++I G G++ +A E+ G P +N LL +CK+
Sbjct: 272 KLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ 289
+++ A L KEI + + D ++D L K + +A+EI +
Sbjct: 332 DLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 7/261 (2%)
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
E +N + M K+G + +++ Y V A+ +F+ M +R S+ ++
Sbjct: 95 EEQNKYPNMSKEGF------VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148
Query: 168 NGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGT 226
N K D + E+ + I D YN+LI GLC G ++A L++E+ ++G
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208
Query: 227 PPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
PD IT+N LL ++ + + ++ +K D+ +Y + GL + ++
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALF 346
+F + V +T MI G+ EG DEA+ ++E +G P + ++ A+
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 347 EKGENDKGEKLLREMVARGLL 367
+ G+ + +L +E+ A+ LL
Sbjct: 329 KAGDLESAYELCKEIFAKRLL 349
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 3 ETSAALELLRRQLVKPDVVMYTTII-DSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
E A ++ + + +KPD + + ++ +S K K + +++ MV K + + +Y +
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKF-EEGEQIWARMVEKNVKRDIRSYNAR 253
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ G + + ++ V L +++ + +V TF ++ EG + EA + + K G
Sbjct: 254 LLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGC 313
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+P ++SL+ C ++ A ++ + + + D +++ L K DEA +
Sbjct: 314 RPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEE 373
Query: 182 LLD 184
+++
Sbjct: 374 IVE 376
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 172/368 (46%), Gaps = 31/368 (8%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
+G+ S A ++ ++ K DVV ++ +I C++ ++A DL+ M + PN T +S
Sbjct: 295 LGDMSDAFKVFN-EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 61 LIYGFCIVGQLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ 119
++ G C +G+ L+ +++K D++++ N L+D K + A +FA + +
Sbjct: 354 ILNG-CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD-- 177
N VS+++++ GY + E KA +F ++ VS +++ + + +D
Sbjct: 413 ----NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Query: 178 -EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPL 236
+ L + ++ K +A + NSLID K G I A + NEM DV ++N L
Sbjct: 469 VQVHGLAIKTNNAKKVAVS---NSLIDMYAKCGDIKFAQSVFNEME----TIDVASWNAL 521
Query: 237 LDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI-KG 295
+ +A+ ++ ++D+ KP+ T+ ++ G G + QE F+ ++ G
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE---IIIRALFEKGEND 352
++ YT M+ + G D+A+ LI + + YE +I RA+ N
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLI----------EGIPYEPSVMIWRAMLSASMNQ 631
Query: 353 KGEKLLRE 360
E+ R
Sbjct: 632 NNEEFARR 639
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/378 (17%), Positives = 160/378 (42%), Gaps = 57/378 (15%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+ ++++ K DA +L+ EM + N V++ +L G+ Q +GL
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPER----NNVSFVTLAQGY----ACQDPIGLY 134
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ + + ++ H F + + + + ++K G N ++L++ Y +
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
V+ A+ +F ++ + D+ + I++ + +++ KLL M + + +
Sbjct: 195 GSVDSARTVFEGILCK----DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 199 NS-----------------------------------LIDGLCKLGRISDAWKLVNEMHH 223
++ L+ +LG +SDA+K+ NEM
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-- 308
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
DV+ ++ ++ C++ ++A+ L +++ + P+ FT + +++G C +G+
Sbjct: 309 --PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG-CAIGKCSG 365
Query: 284 AQEIFQDILIK-GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
E +++K G+++ + +I+ Y K D A+ L +++ S + V++ +I
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK----NEVSWNTVI 421
Query: 343 RALFEKGENDKGEKLLRE 360
GE K + RE
Sbjct: 422 VGYENLGEGGKAFSMFRE 439
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 12/210 (5%)
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLI 202
AK I ++K+G D+ + I++N K +A L DEM + + + +L
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER----NNVSFVTLA 122
Query: 203 DGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK 262
G D L + +H G + + L + + L I G
Sbjct: 123 QGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYD 178
Query: 263 PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALAL 322
+ F LI+ G + A+ +F+ IL K + + +++ Y + G +++L L
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCK----DIVVWAGIVSCYVENGYFEDSLKL 234
Query: 323 ISKMESSGRMPDAVTYEIIIRALFEKGEND 352
+S M +G MP+ T++ ++A G D
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 167/384 (43%), Gaps = 53/384 (13%)
Query: 17 KPDVVMYTTIIDSLCKD-KLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+PD Y + +C D +L S + + ++ R+ + + + I+ F G ++ A
Sbjct: 153 RPDHFTYPVLF-KVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY------- 128
+ +E ++ ++ ++N L++ K G ++A V+ +M +GVKP+ V+
Sbjct: 212 KVFDESPVR----DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Query: 129 ----------------------------SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
++LMD + ++++A+ IF+ + KR +
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TI 323
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
S+T +I+G + ++D + KL D+M + D + +N++I G + R DA L E
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M T PD IT L + +D I + + I+ + +V T L+D K G
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
+ +A +F I + YT +I G G A++ ++M +G PD +T+
Sbjct: 440 ISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 341 IIRALFEKGENDKGEKLLREMVAR 364
++ A G G +M +R
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSR 519
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 160/380 (42%), Gaps = 51/380 (13%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+V + +I+ K A +Y M ++ + P+ VT L+ ++G L +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ + + + N L+D K G++ EA+ +F + K+ + VS+++++ GY
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARC 336
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ ++ +F+ M ++ DV + +I G + K +A L EM + D I
Sbjct: 337 GLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 199 -----------------------------------NSLIDGLCKLGRISDAWKLVNEMHH 223
SL+D K G IS+A + + +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 224 RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKD 283
R + +TY ++ L + AI+ E+ D GI PD T+ L+ C G ++
Sbjct: 453 RNS----LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 284 AQEIFQDILIK-GYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
++ F + + N ++ Y++M++ + GL +EA L MES DA + ++
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL---MESMPMEADAAVWGALL 565
Query: 343 RALFEKGENDKGEKLLREMV 362
G + GEK ++++
Sbjct: 566 FGCRMHGNVELGEKAAKKLL 585
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 124/284 (43%), Gaps = 13/284 (4%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E ++ ++ + + ++D K + +A ++ + + I V++T++I G+
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARC 336
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L + L ++M K +V +N ++ + ++A +F M KP+ ++
Sbjct: 337 GLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ + ++ I + K +S +V T +++ K + EA + + +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+++ Y ++I GL G S A NEM G PD IT+ LL C +
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 249 AIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
+++ + + P + Y+I++D L + G L++A + + +
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 146/306 (47%), Gaps = 7/306 (2%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V D V Y +I ++ A L EM + P+ +TYTS+I G+C G++ A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG----VKPNTVSYSSL 131
L EM + T++ +++ +CK G+++ A + A M K+ + PN V+Y+ +
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 132 MDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKI-KMVDEAWKLLDEMHSEK 190
+ +C + V +A + + M RG P+ + ++I G+ + + V KL+D++
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
++ + C++S L ++ R +A K+ M RG PD + + + LC
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Query: 251 ALIKEIQDQGIKP--DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
L +EI+ + +K D + +L+ GLC+ G +A ++ + +L K + V +I
Sbjct: 401 LLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIE 460
Query: 309 GYCKEG 314
K G
Sbjct: 461 ALKKTG 466
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 165/341 (48%), Gaps = 22/341 (6%)
Query: 44 SEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEM--ILKRMDVEVHTFNILVDALC 101
+ ++++ + P+ + S I + + A L ++ ++ E+ + N+ +D+ C
Sbjct: 3 NSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSC 62
Query: 102 KEGNVKEA-KNVFAVMMKQGVKPNTVS---YSSLM-DGYCLVKEVNKAKDIFNLMV---- 152
++ N F ++ + T+S +S+ M C + ++ D+ ++
Sbjct: 63 INEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYR 122
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
K +V++ I++ + + DEA +L + + ADT+ YN +I G ++
Sbjct: 123 KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLN 182
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
A L+ EM G PDVITY +++ C + +D A L KE+ + TY+ ++
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRIL 242
Query: 273 DGLCKVGRLKDAQEIFQDI-------LIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
+G+CK G ++ A E+ ++ LI VT YT++I +C++ +EAL ++ +
Sbjct: 243 EGVCKSGDMERALELLAEMEKEDGGGLISPNAVT---YTLVIQAFCEKRRVEEALLVLDR 299
Query: 326 MESSGRMPDAVTYEIIIRALFEKGENDKG-EKLLREMVARG 365
M + G MP+ VT ++I+ + E E+ K KL+ ++V G
Sbjct: 300 MGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 205 LCKLGRISD-AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
LC ++D A ++ + D + YN ++ + +++ A LIKE+ G+ P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
DV TYT +I+G C G++ DA + +++ + Y+ ++ G CK G + AL L+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 324 SKMES--SGRM--PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
++ME G + P+AVTY ++I+A EK ++ +L M RG + N
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 2 GETSAALELLRRQ-------LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPN 54
G+ ALELL L+ P+ V YT +I + C+ + V +A + M + PN
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 55 AVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEV-HTFNILVDALCKEGNVKEAKNVF 113
VT LI G + +A+ L + ++K V + F+ +L + +EA+ +F
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 114 AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS--YTIIINGLC 171
+M+ +GV+P+ ++ S + CL++ ++ + K+ V + S + +++ GLC
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 172 KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLG 209
+ EA KL M +K+ +I+ L K G
Sbjct: 429 QQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 173/376 (46%), Gaps = 32/376 (8%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDL---YSEMVAKRIPPNAVTY 58
GE +A+ L R+ VK D ++ L K++ +S+A + Y +V+ R Y
Sbjct: 181 GEVDSAVVLFRKMPVK-DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR-EDLVYAY 238
Query: 59 TSLIYGFCIVGQLQQAVGLLNEM-----------ILKRMDVEVHTFNILVDALCKEGNVK 107
+LI G+ GQ++ A L +++ +R V ++N ++ A K G+V
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVV 298
Query: 108 EAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIII 167
A+ +F M + +T+S+++++DGY V + A +F+ M R D S+ +++
Sbjct: 299 SARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMV 350
Query: 168 NGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTP 227
+G + V+ A + E EK T+ +NS+I K +A L M+ G
Sbjct: 351 SGYASVGNVELA-RHYFEKTPEK---HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 228 PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
PD T LL N+ + + +I + + PDV + LI + G + +++ I
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 288 FQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFE 347
F ++ +K +T + MI GY G EAL L M+S+G P +T+ ++ A
Sbjct: 466 FDEMKLKREVIT---WNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 348 KGENDKGEKLLREMVA 363
G D+ + M++
Sbjct: 523 AGLVDEAKAQFVSMMS 538
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 124/238 (52%), Gaps = 25/238 (10%)
Query: 94 NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
N ++ + + G + EA+++F + + NTV++++++ GY +E+N+A+ +F++M K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 154 RGVSPDVQSYTIIINGLCK---IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
R DV ++ +I+G I+ ++EA KL DEM S D+ +N++I G K R
Sbjct: 100 R----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
I +A L +M R + ++++ ++ C++ VD A+ L +++ + P
Sbjct: 152 IGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCA 203
Query: 271 LIDGLCKVGRLKDAQEIFQDI--LIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
L+ GL K RL +A + L+ G V AY +I GY + G + A L ++
Sbjct: 204 LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI 261
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 44/354 (12%)
Query: 7 ALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFC 66
+ LL Q+ D + + T+ID + DA+ L+SEM + +A ++ ++ G+
Sbjct: 299 SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYA 354
Query: 67 IVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTV 126
VG ++ L K + ++N ++ A K + KEA ++F M +G KP+
Sbjct: 355 SVGNVE----LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 127 SYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM 186
+ +SL+ + + + ++VK V PDV + +I + + E+ ++ DEM
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
K+ + I +N++I G G S+A L M G P IT+ +L+ + V
Sbjct: 470 ---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Query: 247 DKAIA-LIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQ------DILIKG---- 295
D+A A + + I+P + Y+ L++ G+ ++A I D + G
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLD 586
Query: 296 ----YN------VTVQA-----------YTVMINGYCKEGLCDEALALISKMES 328
YN V +A Y ++ N Y GL DEA + MES
Sbjct: 587 ACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMES 640
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 14/317 (4%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
L+K D Y TII K+ A + +M + + PN T++SLI G ++QA
Sbjct: 369 LLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQA 428
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
L EM+ + FNIL+ A + A +F V + + + G
Sbjct: 429 NHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKG 488
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSY--------TIIINGLCKIKMVD--EAWKLLD 184
+ K +L+ + SP +Q+ T N L K D +L+D
Sbjct: 489 RTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMD 548
Query: 185 EMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH 244
EM S + + I +++LID G + A +++ MH GT PDV+ Y + + ++
Sbjct: 549 EMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENK 608
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE---IFQDILIKGYNVTVQ 301
+ A +L +E++ IKP+ TY L+ K G L + ++ I+QD+ GY
Sbjct: 609 CLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDH 668
Query: 302 AYTVMINGYCKEGLCDE 318
+I +C EG+ E
Sbjct: 669 FLKELIEEWC-EGVIQE 684
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 36/365 (9%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E L ++ +KP++ + ++++ D + +Y M + + +Y L+ C+
Sbjct: 291 EDLLKENIKPNIYVINSLMNVNSHD--LGYTLKVYKNMQILDVTADMTSYNILLKTCCLA 348
Query: 69 GQLQQAVGLLNEMILKRMD------VEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVK 122
G++ A + E KRM+ ++ T+ ++ K A V M GV
Sbjct: 349 GRVDLAQDIYKEA--KRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
PNT ++SSL+ V +A +F M+ G P+ Q + I+++ + D A++L
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE------MHHRGTP--------- 227
++ + D + GR S L N + +P
Sbjct: 467 FQSWK-----GSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFC 521
Query: 228 --PDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQ 285
P TYN LL + K L+ E++ G+ P+ T++ LID G ++ A
Sbjct: 522 FKPTTATYNILLKACGTDYYRGKE--LMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 286 EIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE-ALALISKMESSGRMPDAVTYEIIIRA 344
I + + G V AYT I C E C + A +L +M P+ VTY +++A
Sbjct: 580 RILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKA 638
Query: 345 LFEKG 349
+ G
Sbjct: 639 RSKYG 643
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 150/343 (43%), Gaps = 36/343 (10%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLN--EMILKRMDVEVHTFNILVDALCKEGNVKE 108
+P + +I+GF G + + + IL ++ + I V LC G+ +
Sbjct: 228 LPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLC--GDYVK 285
Query: 109 AKNVFAVMMKQGVKPNTVSYSSLMD------GYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
++ ++ ++K+ +KPN +SLM+ GY L +V K I + V+ D+ S
Sbjct: 286 SRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYTL--KVYKNMQILD------VTADMTS 337
Query: 163 YTIIINGLC---KIKMVDEAWKLLDEMHSEKIIA-DTICYNSLIDGLCKLGRISDAWKLV 218
Y I++ C ++ + + +K M S ++ D Y ++I A K+
Sbjct: 338 YNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVK 397
Query: 219 NEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKV 278
++M G P+ T++ L+ + V++A L +E+ G +P+ + IL+ +
Sbjct: 398 DDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEA 457
Query: 279 GRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLC---DEALALISK------MESS 329
+ A +FQ N ++ A ++ G + +L+++ +++S
Sbjct: 458 CQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQAS 517
Query: 330 GRM---PDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
R P TY I+++A + +G++L+ EM + GL N
Sbjct: 518 KRFCFKPTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPN 558
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 159/354 (44%), Gaps = 28/354 (7%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
Q+ +P+V +Y + + +LY M+ + P++ TY+SL+ + +
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 889
Query: 74 AVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
+ L I K V L+D G ++EA+ VF M ++ + +++++++
Sbjct: 890 S---LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMV 942
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
Y V +++ A + N M ++ + + +ING + +++A L ++M +
Sbjct: 943 SAYRRVLDMDSANSLANQMSEKNEA----TSNCLINGYMGLGNLEQAESLFNQM----PV 994
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
D I + ++I G + R +A + +M G PD +T + ++ C V + +
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA-CAHLGV---LEI 1050
Query: 253 IKEIQ----DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
KE+ G DV+ + L+D K G L+ A +F ++ K + + +I
Sbjct: 1051 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIE 1106
Query: 309 GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
G G EAL + +KME P+AVT+ + A G D+G ++ R M+
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
E L Q+ D++ +TT+I ++K +A ++ +M+ + I P+ VT +++I +
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L+ + + ++V+ + LVD K G+++ A VF + K+ N +
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCW 1101
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+S+++G +A +F M V P+ ++ + +VDE ++ M
Sbjct: 1102 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
Query: 189 E-KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVD 247
+ I+++ Y ++ K G I +A +L+ M P+ + + LLD C+ H +
Sbjct: 1162 DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDG-CRIHK-N 1216
Query: 248 KAIALIKEIQDQGIKP-DVFTYTILIDGLCKVGRLKDAQEI 287
IA I + ++P + Y +L+ + R +D EI
Sbjct: 1217 LVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 1257
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 11/215 (5%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGF-----CIVGQLQQ 73
D V + I S C+ ++ AY EM + P+ VTYT+LI C++G
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN--- 232
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
GL N M+LK + TFN+ + L +A ++ +M K V+P++++Y+ ++
Sbjct: 233 --GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
G+ L + + A+ ++ M +G P+++ Y +I+ LCK D A+ + + +K
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP 228
+ L+ GL K G++ A K + E+ HR PP
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQA-KSIMELVHRRVPP 384
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 2/205 (0%)
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
+D++ +FNI + + C+ G + A M K G+ P+ V+Y++L+ +
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
++NLMV +G P++ ++ + I L + +A LL M ++ D+I YN +I G
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 206 CKLGRISD-AWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPD 264
L R D A ++ MH +G P++ Y ++ LCK+ N D A + K+ + P+
Sbjct: 293 F-LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQ 289
+ T +L+ GL K G+L A+ I +
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 102 KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFN-LMVKRGVSPDV 160
K G K+A + F M G K + S+++ + +++ + + K G+ D
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 177
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
S+ I I C++ ++D A+ + EM + D + Y +LI L K R L N
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M +G P++ T+N + L A L+ + ++PD TY ++I G + R
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LAR 296
Query: 281 LKD-AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYE 339
D A+ ++ + KGY ++ Y MI+ CK G D A + P+ T E
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 340 IIIRALFEKGENDKGEKLLREMVAR 364
++++ L +KG+ D+ + ++ E+V R
Sbjct: 357 MLLKGLVKKGQLDQAKSIM-ELVHR 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 215 WKLVNEMHHR-GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
W+ +++ + G D +++N + C+ +D A ++E++ G+ PDV TYT LI
Sbjct: 161 WEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLIS 220
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
L K R ++ +++KG + + V I +A L+ M P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
D++TY ++I+ F D E++ M +G
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
KP++ + I L + DA DL M ++ P+++TY +I GF + A
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
+ M K + + ++ LCK GN A + M++ PN + L+ G
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLV 363
Query: 137 LVKEVNKAKDIFNLMVKRGVSP 158
++++AK I L V R V P
Sbjct: 364 KKGQLDQAKSIMEL-VHRRVPP 384
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 175/354 (49%), Gaps = 20/354 (5%)
Query: 20 VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLN 79
V + +++ D K ++ DA ++ E+ + NAV + +L+ G+ G+ ++A+ L +
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 80 EMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVK 139
+M + ++ T + + A G V+E K A+ + G++ + + +SL++ YC V
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 140 EVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYN 199
+ A+ +F+ M ++ DV ++ +II+G + +V++A + M EK+ D +
Sbjct: 324 LIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 200 SLIDGLCKLGRISDAWKLVNEMH----HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+L+ + ++ KL E+ D++ + ++D+ K ++ A K+
Sbjct: 380 TLMSAAAR----TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA----KK 431
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
+ D ++ D+ + L+ + G +A +F + ++G V + ++I + G
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN 369
DEA + +M+SSG +P+ +++ ++ + + G +++ LR+M GL N
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 158/347 (45%), Gaps = 48/347 (13%)
Query: 2 GETSAALEL---LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ A+ L +R+Q V+P V +T + + V + ++ + + + +
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRM-DVEVHTFNILVDALCKEGNVKEAKNVFAVMM 117
TSL+ +C VG ++ A EM+ RM + +V T+N+++ ++G V++A + +M
Sbjct: 313 TSLLNFYCKVGLIEYA-----EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 118 KQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD 177
+ +K + V+ ++LM + + K++ ++ D+ + +++ K +
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+A K+ D + D I +N+L+ + G +A +L M G PP+VIT+N ++
Sbjct: 428 DAKKVFD----STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN 297
L ++ VD+A + ++Q GI P++ ++T
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT---------------------------- 515
Query: 298 VTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
M+NG + G +EA+ + KM+ SG P+A + + + A
Sbjct: 516 -------TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 52/326 (15%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
V+ D++++ T++ + + L +A L+ M + +PPN +T+
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW----------------- 479
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
N+++ +L + G V EAK++F M G+ PN +S++++M+G
Sbjct: 480 ------------------NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVD-----EAWKLLDEMHSEK 190
+A M + G+ P+ S T+ ++ + + + + + HS
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSL 581
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
+ +T SL+D K G I+ A K+ + P N ++ N+ +AI
Sbjct: 582 VSIET----SLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAI 633
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK-GYNVTVQAYTVMING 309
AL + ++ G+KPD T T ++ G + A EIF DI+ K ++ Y +M++
Sbjct: 634 ALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDL 693
Query: 310 YCKEGLCDEALALISKMESSGRMPDA 335
G ++AL LI +M PDA
Sbjct: 694 LASAGETEKALRLIEEMPFK---PDA 716
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 155/370 (41%), Gaps = 53/370 (14%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI------ 67
Q P Y + SLCK+ + +A L +EM + + Y ++ G C+
Sbjct: 29 QAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQG-CVYERDLS 87
Query: 68 VGQLQQAVGLLN---------------------------EMILKRMDVE-VHTFNILVDA 99
G+ A L N E++ ++ V V ++ ++
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 100 LCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPD 159
C+ G + A F M++ + P+ ++ +K + + +VK G+
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 160 VQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVN 219
V + + + K ++D+A K+ DE+ +A +N+L+ G + G+ +A +L +
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA----WNALMVGYVQNGKNEEAIRLFS 263
Query: 220 EMHHRGTPPDVITYNPLLDVLCKSHNVDK-----AIALIKEIQDQGIKPDVFTYTILIDG 274
+M +G P +T + L V++ AIA++ G++ D T L++
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV-----NGMELDNILGTSLLNF 318
Query: 275 LCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
CKVG ++ A+ +F + K V + ++I+GY ++GL ++A+ + M D
Sbjct: 319 YCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 335 AVTYEIIIRA 344
VT ++ A
Sbjct: 375 CVTLATLMSA 384
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 97 VDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG- 155
V +LCK G +KEA ++ M + ++ Y ++ G ++++ K I ++K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 156 ---VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+ +++ +I C +A ++ + + S+ + + + ++I C++G
Sbjct: 102 FYARNEYIETKLVIFYAKC------DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ----DQGIKPDVFTY 268
A EM PD N ++ +CK+ K + + G++ VF
Sbjct: 156 GALMGFVEMLENEIFPD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMES 328
+ L D K G L DA ++F +I + A+ ++ GY + G +EA+ L S M
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 329 SGRMPDAVTYEIIIRALFEKGENDKGEK 356
G P VT + A G ++G++
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 31/295 (10%)
Query: 92 TFNILVDALCKEGNVKEAKNVFAVMMKQ-GVKPNTVSYSSLMDGYC----------LVKE 140
T +D L + G K+ + F M G+K + S + ++ C +VK
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK- 235
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
N A +IF PD ++I+G C + +DEA +L EM T YN
Sbjct: 236 -NTANEIF---------PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNM 285
Query: 201 LIDGLCKLGRISDAWKLVNE-------MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
++D +CKL R D +KL E M RG P + T+N L++ LCK ++A+ L
Sbjct: 286 MLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLF 345
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYN--VTVQAYTVMINGYC 311
+ + G +PD TY +LI L + R+ + E+ + GY + + Y + C
Sbjct: 346 GRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILC 405
Query: 312 KEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGL 366
+ A+++ M+++G P TY++++ + + + L +E +G+
Sbjct: 406 GIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+K D T ++ LC+ S A + A I P+ LI G+CI +L +A
Sbjct: 207 LKRDKESLTLVVKKLCEKGHASIAEKMVKN-TANEIFPDENICDLLISGWCIAEKLDEAT 265
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVK-------EAKNVFAVMMKQGVKPNTVSY 128
L EM ++ +N+++D +CK K E + V M +GV NT ++
Sbjct: 266 RLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETF 325
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
+ L++ C ++ +A +F M + G PD ++Y ++I L + + E +++D+M S
Sbjct: 326 NVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKS 385
Query: 189 EKI--IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
+ + Y + LC + R+ A + M G P + TY+ L+ +C ++ +
Sbjct: 386 AGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQL 445
Query: 247 DKAIALIKEIQDQGI 261
+A L KE +GI
Sbjct: 446 TRANGLYKEAAKKGI 460
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 149/347 (42%), Gaps = 44/347 (12%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
++ D+ + +I K + A L+ EM K ++VTY ++I G+ G +++A+
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAM 320
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L +EM + + T+N ++ L + + +E N F M++ G +PNTV+ SSL+
Sbjct: 321 ALFSEM----ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 136 CLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADT 195
+ K+I ++ G ++ T II+ K+ + A ++ D +IA
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA-- 434
Query: 196 ICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKE 255
+ ++I G A L ++M GT PD +T +L S + D A +
Sbjct: 435 --WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 256 IQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-----------LIKGYNV----- 298
+ + I+P V Y ++ L + G+L DA E + L+ G +V
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLE 552
Query: 299 ---------------TVQAYTVMINGYCKEGLCDEALALISKMESSG 330
YT+M N Y + G +EA + +KM+ G
Sbjct: 553 IARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 38/341 (11%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DV + ID K + +++A+ ++ EM + +AV++ ++I G+ + + L
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
M+ R++ + TF ++ A C G++ + + ++K G+ N+ SL+D Y
Sbjct: 472 VSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530
Query: 139 KEVNKAKDIFNLMVKRG-VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ +A+ I + +R VS ++ L++MH++++ +
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEE--------------------LEKMHNKRLQEMCVS 570
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+NS+I G + DA L M G PD TY +LD N+ A L K+I
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA---NLASA-GLGKQIH 626
Query: 258 DQGIK----PDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
Q IK DV+ + L+D K G L D++ +F+ L + + VT + MI GY
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF-VT---WNAMICGYAHH 682
Query: 314 GLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKG 354
G +EA+ L +M P+ VT+ I+RA G DKG
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 21/268 (7%)
Query: 91 HTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
++N ++ +E + +A +F +M G+ + +S S + LVK +++ I+ L
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
+K +S DV I+ K + + EA+++ DEM D + +N++I + G+
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGK 463
Query: 211 ISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTI 270
+ L M PD T+ +L C ++ + + I G+ +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 271 LIDGLCKVGRLKDAQEI----FQDILIKG--------YNVTVQ----AYTVMINGYCKEG 314
LID K G +++A++I FQ + G +N +Q ++ +I+GY +
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 315 LCDEALALISKMESSGRMPDAVTYEIII 342
++A L ++M G PD TY ++
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVL 610
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 36 VSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
VS + +M KR+ V++ S+I G+ + Q + A L M+ + + T+
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 96 LVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG 155
++D + K + A ++K+ ++ + S+L+D Y +++ ++ LM ++
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR----LMFEKS 664
Query: 156 VSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAW 215
+ D ++ +I G +EA +L + M E I + + + S++ +G I
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 216 KLVNEMHH-RGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
+ M G P + Y+ ++D+L KS V +A+ LI+E+ + DV T+L G
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA--DDVIWRTLL--G 780
Query: 275 LCKVGRLK-DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
+C + R + E L++ AYT++ N Y G+ ++ L M
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 154/369 (41%), Gaps = 31/369 (8%)
Query: 17 KPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
+ + V ++ II ++ L+S A + EM + Y S++ + +L+ G
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG-G 301
Query: 77 LLNEMILKR---MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
L+ LK D V T + + A C N+++A+ ++ N SY++++
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCD--NMQDAQ----ILFDNSENLNRQSYNAMIT 355
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
GY + KA +F+ ++ G+ D S + + +K + E ++ +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D N+ ID K +++A+++ +EM R D +++N ++ ++ + + L
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKE 313
+ I+PD FT+ ++ C G L EI I+ G +I+ Y K
Sbjct: 472 VSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530
Query: 314 GLCDEALALISKM----ESSGRMPD------------AVTYEIIIRALFEKGENDKGEKL 357
G+ +EA + S+ SG M + V++ II K +++ + L
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 590
Query: 358 LREMVARGL 366
M+ G+
Sbjct: 591 FTRMMEMGI 599
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 16 VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
+ PD Y T++D+ ++++++ K + + ++L+ + G L +
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 76 GLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGY 135
L+ E L+R + T+N ++ G +EA +F M+ + +KPN V++ S++
Sbjct: 659 -LMFEKSLRR---DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Query: 136 CLVKEVNKAKDIFNLMVK-RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
+ ++K + F +M + G+ P + Y+ +++ L K V A +L+ EM E AD
Sbjct: 715 AHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE---AD 771
Query: 195 TICYNSLIDGLCKLGR 210
+ + +L+ G+C + R
Sbjct: 772 DVIWRTLL-GVCTIHR 786
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
Query: 88 VEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDI 147
V F+ + K+G ++ K A M+ G +P T + L+ Y ++ A +
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 148 FNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCK 207
F+ M R DV S+ +ING K + +A + M + D + +NS++ G +
Sbjct: 106 FDKMPLR----DVVSWNKMINGYSKSNDMFKANSFFNMMP----VRDVVSWNSMLSGYLQ 157
Query: 208 LGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFT 267
G + ++ +M G D T+ +L V + + + + G DV
Sbjct: 158 NGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 268 YTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKME 327
+ L+D K R ++ +FQ I K +++ +I G + L AL +M+
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEK----NSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 328 SSGRMPDAVTYEIIIRA 344
Y ++R+
Sbjct: 274 KVNAGVSQSIYASVLRS 290
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 162/344 (47%), Gaps = 16/344 (4%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DVV +T +I K K + +A + M K + V++ +++ G+ G + A+ L
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAMLSGYAQNGFTEDALRLF 252
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
N+M+ + T+ I++ A + +++ ++ ++ V+ N ++L+D +
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
+++ A+ IFN + G ++ ++ +I+G +I + A +L D M +++ +
Sbjct: 313 RDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS----W 365
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRG-TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
NSLI G G+ + A + +M G + PD +T +L +++ ++ I+
Sbjct: 366 NSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR 425
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
IK + Y LI + G L +A+ +F ++ + V +Y + + G
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD----VVSYNTLFTAFAANGDGV 481
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
E L L+SKM+ G PD VTY ++ A G +G+++ + +
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 158/351 (45%), Gaps = 30/351 (8%)
Query: 18 PDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGL 77
P+V + ++ K + +D LY + I P+A + F +V + G+
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDA-------FSFPVVIKSAGRFGI 121
Query: 78 LNEMILKRMDV--EVHTFNILVDALCKEGNVKEAKNVF-AVMMKQGVKPNTVSYSSLMDG 134
L + +++++ + + N+++D K +V+ A+ VF + ++G N ++ G
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV-----MISG 176
Query: 135 YCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIAD 194
Y +A +F++M + DV S+T++I G K+K ++ A K D M + +++
Sbjct: 177 YWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVS- 231
Query: 195 TICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIK 254
+N+++ G + G DA +L N+M G P+ T+ ++ + +L+K
Sbjct: 232 ---WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 255 EIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEG 314
I ++ ++ + F T L+D K ++ A+ IF ++ G + + MI+GY + G
Sbjct: 289 LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIG 345
Query: 315 LCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
A L M + V++ +I G+ + +M+ G
Sbjct: 346 DMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 15/294 (5%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G T AL L L V+P+ + +I + S L + KR+ N
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK 302
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
T+L+ +Q A + NE+ +R + T+N ++ + G++ A+ +F M K
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS-PDVQSYTIIINGLCKIKMVD 177
+ N VS++SL+ GY + A + F M+ G S PD + +++ + ++
Sbjct: 360 R----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 178 EAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
++D + +I + Y SLI + G + +A ++ +EM R DV++YN L
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLF 471
Query: 238 DVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI 291
+ + + + L+ +++D+GI+PD TYT ++ + G LK+ Q IF+ I
Sbjct: 472 TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 114/256 (44%), Gaps = 12/256 (4%)
Query: 4 TSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIY 63
T + ++L+ + V+ + + T ++D K + + A +++E+ +R N VT+ ++I
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMIS 339
Query: 64 GFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQG-VK 122
G+ +G + A L + M + V ++N L+ G A F M+ G K
Sbjct: 340 GYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 123 PNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKL 182
P+ V+ S++ + ++ I + + K + + Y +I + + EA ++
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRV 455
Query: 183 LDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCK 242
DEM D + YN+L G + L+++M G PD +TY +L +
Sbjct: 456 FDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNR 511
Query: 243 SHNVDKAIALIKEIQD 258
+ + + + K I++
Sbjct: 512 AGLLKEGQRIFKSIRN 527
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 9/242 (3%)
Query: 40 YDLYSEMVAKR----IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI 95
++L +++AK P +T LI + ++ + +M+ + N
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 96 LVDAL-CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKR 154
++D L G +++A +F GV PNT SY+ LM +CL +++ A +F M++R
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 155 GVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
V PDV SY I+I G C+ V+ A +LLD+M ++ + D +LI GLC G +
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEG 275
Query: 215 WKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG 274
K + EM +G P N L+ C V++A +++ + G T+ ++I
Sbjct: 276 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPL 335
Query: 275 LC 276
+C
Sbjct: 336 IC 337
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G LQ+A L L + ++N+L+ A C ++ A +F M+++ V P+ SY
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
L+ G+C +VN A ++ + M+ +G PD +I GLC M DE K L+EM S
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+ N L+ G C G++ +A +V + G T+ ++ ++C +K
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Query: 249 AIALIKEIQDQGIKPDVFTYTILID 273
IK + +K ++ T ++D
Sbjct: 345 ----IKLFLEDAVKEEITGDTRIVD 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 113/236 (47%), Gaps = 5/236 (2%)
Query: 128 YSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK-MVDEAWKLLDEM 186
++ L+ Y K K F M++ +P + I++ L + + +A++L
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 187 HSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNV 246
++ +T YN L+ C +S A++L +M R PDV +Y L+ C+ V
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 247 DKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVM 306
+ A+ L+ ++ ++G PD LI GLC G + ++ ++++ KG++ +
Sbjct: 242 NGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 297
Query: 307 INGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
+ G+C G +EA ++ + +G + T+E++I + + E++K + L + V
Sbjct: 298 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 2 GETSAALELL---RRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G A EL R V P+ Y ++ + C + +S AY L+ +M+ + + P+ +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
LI GFC GQ+ A+ LL++M+ K + L+ LC +G E K M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
+G P+ + L+ G+C +V +A D+ +++K G + ++ ++I +C ++
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Query: 179 AWKLLDEMHSEKIIADT 195
L++ E+I DT
Sbjct: 345 IKLFLEDAVKEEITGDT 361
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 18 PDVVMYTTIIDSLCKDK-LVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVG 76
P I+D L + + A++L+ + PN +Y L+ FC+ L A
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 77 LLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYC 136
L +M+ + + +V ++ IL+ C++G V A + M+ +G P+ +L+ G C
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLC 267
Query: 137 LVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
++ K M+ +G SP ++ G C V+EA
Sbjct: 268 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 9 ELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV 68
++L R +V PDV Y +I C+ V+ A +L +M+ K P+ +LI G C
Sbjct: 215 KMLERDVV-PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQ 269
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G + L EMI K N LV C G V+EA +V V+MK G ++ ++
Sbjct: 270 GMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 329
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQ 161
++ C E K K VK ++ D +
Sbjct: 330 EMVIPLICNEDESEKIKLFLEDAVKEEITGDTR 362
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%)
Query: 51 IPPNAVTYTSLI-----YGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGN 105
+ P+ +T+ ++ GF +G+ A L N +D + LVD K G
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN-----FVDCDSFVRLSLVDMYAKTGQ 176
Query: 106 VKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTI 165
+K A VF + K + + ++ L++GYC K+++ A +F M +R + S++
Sbjct: 177 LKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWST 232
Query: 166 IINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRG 225
+I G ++ A +L + M + +++ + +LI+G + G A EM +G
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVS----WTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 226 TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQ 285
P+ T +L KS + I + I D GIK D T L+D K G L A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 286 EIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRAL 345
+F ++ K + ++T MI G+ G +A+ +M SG PD V + ++ A
Sbjct: 349 TVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 346 FEKGENDKGEKLLREM 361
E D G M
Sbjct: 405 LNSSEVDLGLNFFDSM 420
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 133/281 (47%), Gaps = 13/281 (4%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
++ K ++++ +I+ C+ K + A L+ M + N+ ++++LI G+ G+L +
Sbjct: 190 RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNR 245
Query: 74 AVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
A L M K V ++ L++ + G+ + A + + M+++G+KPN + ++++
Sbjct: 246 AKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLS 301
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
+ I ++ G+ D T +++ K +D A + M+ +
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK---- 357
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
D + + ++I G GR A + +M + G PD + + +L S VD +
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 254 KEIQ-DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
++ D I+P + Y +++D L + G+L +A E+ +++ I
Sbjct: 418 DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
GE + A +L + + +VV +TT+I+ + A Y EM+ K + PN T ++
Sbjct: 241 GELNRAKQLFE-LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ G L + + ++ + ++ LVD K G + A VF+ M + +
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+S+++++ G+ + ++A F M+ G PD + ++ VD
Sbjct: 360 ----LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 182 LLDEMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
D M + I T+ Y ++D L + G++++A +LV M PD+ T+ L
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM---PINPDLTTWAALYRA- 471
Query: 241 CKSH 244
CK+H
Sbjct: 472 CKAH 475
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 54/325 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DVV+ T+ +D K K + A ++ EM + NAV++T+L+ + G+L++A +
Sbjct: 144 DVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMF 199
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ M + + ++N LVD L K G++ AK +F M K+ + +SY+S++DGY
Sbjct: 200 DLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDI----ISYTSMIDGYAKG 251
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
++ A+D+F RGV DV++++ +I G + +EA+K+ EM ++ + D
Sbjct: 252 GDMVSARDLFE--EARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
L+ ++G K+ + +H R SH V A
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNK-------------FSSHYVVPA--------- 345
Query: 259 QGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDE 318
LID K G + A ++F+++ + + +Y M+ G G E
Sbjct: 346 ------------LIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSE 389
Query: 319 ALALISKMESSGRMPDAVTYEIIIR 343
A+ L KM G +PD V + +I++
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILK 414
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 57/292 (19%)
Query: 47 VAKRIP-PNAVTYTSLIYGFCIVGQLQQAVGLLNEMI---LKRMDVEVHTFNILVDALCK 102
V +R+P P + LI G+ + V +L M+ L R D +TF +++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDE--YTFPLVMKVCSN 122
Query: 103 EGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQS 162
G V+ +V ++++ G + V +S +D Y K++ A+ +F M +R + S
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVS 178
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
+T ++ K ++EA + D M + + +N+L+DGL K G LVN
Sbjct: 179 WTALVVAYVKSGELEEAKSMFDLMPERNLGS----WNALVDGLVKSG------DLVNA-- 226
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK 282
K++ D+ K D+ +YT +IDG K G +
Sbjct: 227 -------------------------------KKLFDEMPKRDIISYTSMIDGYAKGGDMV 255
Query: 283 DAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
A+++F++ V V+A++ +I GY + G +EA + S+M + PD
Sbjct: 256 SARDLFEE----ARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 45/245 (18%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQ 73
++ K D++ YT++ID K + A DL+ E A+ + A +++LI G+ GQ +
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARDLFEE--ARGVDVRA--WSALILGYAQNGQPNE 287
Query: 74 AVGLLNEMILK--------------------------RMDVEVH----------TFNILV 97
A + +EM K ++D +H L+
Sbjct: 288 AFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALI 347
Query: 98 DALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVS 157
D K G++ A +F M ++ + VSY S+M+G + ++A +F MV G+
Sbjct: 348 DMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV 403
Query: 158 PDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE-KIIADTICYNSLIDGLCKLGRISDAWK 216
PD ++T+I+ + ++V+E + + M + I+A Y+ +++ L + G++ +A++
Sbjct: 404 PDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYE 463
Query: 217 LVNEM 221
L+ M
Sbjct: 464 LIKSM 468
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 1/238 (0%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI-LKRMDVEVHTFNILVDALCKEGNVKEA 109
IP + +L++ + ++A + EM + ++ ++ T+N ++ LC+ G+ +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 110 KNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIING 169
++ A M ++ +KP S+ ++DG+ ++ ++ + + +M + GV V +Y I+I
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 170 LCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPD 229
LCK K EA L+D + S ++ +++ Y+ LI G C + +A L M G PD
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 230 VITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEI 287
Y L+ LCK + + A+ L +E ++ P L++GL ++ +A+E+
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 146/325 (44%), Gaps = 10/325 (3%)
Query: 8 LELLRRQLVKPDV----VMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS--- 60
LE+ R + PD ++++ + +L ++K L + + P + ++
Sbjct: 59 LEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAI 118
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ- 119
++YG L +++ + + V + N L+ A + KEA V+ M K
Sbjct: 119 ILYG--RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 176
Query: 120 GVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA 179
G++P+ +Y+ ++ C + + I M ++ + P S+ ++I+G K + DE
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 180 WKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDV 239
K++ M + YN +I LCK + ++A L++ + P+ +TY+ L+
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 240 LCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVT 299
C N+D+A+ L + + G KPD Y LI LCK G + A + ++ + K + +
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 300 VQAYTVMINGYCKEGLCDEALALIS 324
++NG DEA LI+
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIA 381
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 2/238 (0%)
Query: 123 PNTV-SYSSLMDGYCLVKEVNKAKDIFNLMVKR-GVSPDVQSYTIIINGLCKIKMVDEAW 180
P TV S ++L+ + K+ +A ++ M K G+ PD+++Y +I LC+ ++
Sbjct: 143 PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSY 202
Query: 181 KLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
++ EM + I + +IDG K + + K++ M G V TYN ++ L
Sbjct: 203 SIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCL 262
Query: 241 CKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTV 300
CK +A ALI + ++P+ TY++LI G C L +A +F+ ++ GY
Sbjct: 263 CKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDS 322
Query: 301 QAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLL 358
+ Y +I+ CK G + AL L + +P + ++ L + + D+ ++L+
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
I P+ TY +I C G + ++ EM K + +F +++D KE E +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
V +M + GV +Y+ ++ C K+ +AK + + ++ + P+ +Y+++I+G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
C + +DEA L + M D+ CY +LI LCK G A L E + P
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 231 ITYNPLLDVLCKSHNVDKA---IALIKE 255
L++ L VD+A IA++KE
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKE 385
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 158 PDVQSYTIIINGLC---KIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDA 214
PD +S + + + + M+D + + + +I N+L+ +A
Sbjct: 106 PDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEA 165
Query: 215 WKLVNEMHHR-GTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILID 273
++ EM G PD+ TYN ++ VLC+S + + +++ E++ + IKP ++ ++ID
Sbjct: 166 NRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMID 225
Query: 274 GLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMP 333
G K + + +++ + + G +V V Y +MI CK EA ALI + S P
Sbjct: 226 GFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRP 285
Query: 334 DAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
++VTY ++I + D+ L MV G
Sbjct: 286 NSVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I D YN +I LC+ G S ++ +V EM + P ++ ++D K D+
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+++ + + G+ V TY I+I LCK + +A+ + ++ Y+++I+G+
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 311 CKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARG 365
C E DEA+ L M +G PD+ Y +I L + G+ + L RE + +
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 24/297 (8%)
Query: 51 IPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
I N + SL+Y C G L++A + +E+ +++ +NIL++ L K G+ +
Sbjct: 127 IDSNLGSKLSLMYTNC--GDLKEASRVFDEVKIEK----ALFWNILMNELAKSGDFSGSI 180
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
+F MM GV+ ++ ++S + + ++ V+ + + ++K G ++
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
K + VD A K+ DEM +E+ D I +NS+I+G G + +M G D+
Sbjct: 241 LKNQRVDSARKVFDEM-TER---DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP-----DVFTYTILIDGLCKVGRLKDAQ 285
T + S + I+L + + G+K D F T L+D K G L A+
Sbjct: 297 ATIVSVFAGCADS----RLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAK 351
Query: 286 EIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIII 342
+F+++ + +V +YT MI GY +EGL EA+ L +ME G PD T ++
Sbjct: 352 AVFREM----SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 161/360 (44%), Gaps = 16/360 (4%)
Query: 2 GETSAALELLRRQL---VKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTY 58
G+ S ++ L ++ + V+ D ++ + S + V L+ ++
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 59 TSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
SL+ + ++ A + +EM + +V ++N +++ G ++ +VF M+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
G++ + + S+ G + ++ + + ++ VK S + + +++ K +D
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 179 AWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLD 238
A + EM +++ Y S+I G + G +A KL EM G PDV T +L+
Sbjct: 350 AKAVFREMSDRSVVS----YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 239 VLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNV 298
+ +D+ + + I++ + D+F L+D K G +++A+ +F ++ +K
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK---- 461
Query: 299 TVQAYTVMINGYCKEGLCDEALALISKMESSGRM-PDAVTYEIIIRALFEKGENDKGEKL 357
+ ++ +I GY K +EAL+L + + R PD T ++ A DKG ++
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 175/430 (40%), Gaps = 88/430 (20%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLI---------- 62
R++ VV YT++I ++ L +A L+ EM + I P+ T T+++
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 63 -------------YGFCIV------------GQLQQAVGLLNEMILKRMDVEVHTFNILV 97
GF I G +Q+A + +EM +K ++ ++N ++
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTII 470
Query: 98 DALCKEGNVKEAKNVFAVMMKQG-VKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRG- 155
K EA ++F +++++ P+ + + ++ + +K ++I +++ G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 156 ------------------------------VSPDVQSYTIIINGLCKIKMVDEAWKLLDE 185
S D+ S+T++I G EA L ++
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR-GTPPDVITYNPLLDVLCKSH 244
M I AD I + SL+ G + + W+ N M H P V Y ++D+L ++
Sbjct: 591 MRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTG 650
Query: 245 NVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR-LKDAQEIFQDIL-IKGYNVTVQA 302
++ KA I++ I PD + L+ G C++ +K A+++ + + ++ N
Sbjct: 651 DLIKAYRF---IENMPIPPDATIWGALLCG-CRIHHDVKLAEKVAEKVFELEPENTGY-- 704
Query: 303 YTVMINGYCKEGLCDEALALISKMESSG--RMPDAVTYEIIIRA-LFEKG-----ENDKG 354
Y +M N Y + ++ L ++ G + P EI R +F G E +
Sbjct: 705 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Query: 355 EKLLREMVAR 364
E LR++ AR
Sbjct: 765 EAFLRKVRAR 774
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 10/252 (3%)
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
D V N + C+ GN++ A + V K + P T+ S++ K + K
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTL--CSVLQLCADSKSLKDGK 114
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
++ N + G D + + + EA ++ DE+ EK + +N L++ L
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK----ALFWNILMNEL 170
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDV 265
K G S + L +M G D T++ + +V L I G
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 266 FTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISK 325
L+ K R+ A+++F ++ + V ++ +INGY GL ++ L++ +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 326 MESSGRMPDAVT 337
M SG D T
Sbjct: 287 MLVSGIEIDLAT 298
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 152/338 (44%), Gaps = 22/338 (6%)
Query: 24 TTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMIL 83
+T D L ++V D +D P+ + +I GF + ++++ L M+
Sbjct: 59 STSSDFLPYAQIVFDGFD----------RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLC 108
Query: 84 KRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNK 143
+TF L+ A +E + A + K G + + + +SL++ Y +
Sbjct: 109 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 144 AKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLID 203
A +L+ R PD S+ +I G K +D A L +M +EK + I + ++I
Sbjct: 169 A----HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM-AEK---NAISWTTMIS 220
Query: 204 GLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKP 263
G + +A +L +EM + PD ++ L + +++ + + I+
Sbjct: 221 GYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRM 280
Query: 264 DVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALI 323
D +LID K G +++A E+F++I K +VQA+T +I+GY G EA++
Sbjct: 281 DSVLGCVLIDMYAKCGEMEEALEVFKNIKKK----SVQAWTALISGYAYHGHGREAISKF 336
Query: 324 SKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+M+ G P+ +T+ ++ A G ++G+ + M
Sbjct: 337 MEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ AL L R+ + + + + +TT+I + + +A L+ EM + P+ V+ +
Sbjct: 195 GKMDIALTLFRK-MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV 121
+ +G L+Q + + + R+ ++ +L+D K G ++EA VF + K+ V
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 122 KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWK 181
+ ++++L+ GY +A F M K G+ P+V ++T ++ +V+E
Sbjct: 314 Q----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 182 LLDEMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVL 240
+ M + + TI Y ++D L + G + +A + + EM P+ + + LL
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM---PLKPNAVIWGALLKA- 425
Query: 241 CKSHNVDKAIALIKEI 256
C+ H K I L +EI
Sbjct: 426 CRIH---KNIELGEEI 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIP-PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKR 85
++SL V+ + L + ++ RIP P+ V++ S+I G+ G++ A+ L +M K
Sbjct: 153 VNSLINSYAVTGNFKL-AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK- 210
Query: 86 MDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAK 145
++ ++ + KEA +F M V+P+ VS ++ + + + + K
Sbjct: 211 ---NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 146 DIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGL 205
I + + K + D ++I+ K ++EA ++ + + + A + +LI G
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA----WTALISGY 323
Query: 206 CKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ-DQGIKPD 264
G +A EM G P+VIT+ +L + V++ + ++ D +KP
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 265 VFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
+ Y ++D L + G L +A+ Q++ +K
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 175/416 (42%), Gaps = 92/416 (22%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
DVV + +I ++ + +A L+ +M K N VT+TS++YG+C G +++A L
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLF 254
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQ--GVKPNTVSYSSLM---- 132
EM + + ++ ++ +EA +F M K V PN + SL
Sbjct: 255 CEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 133 -------------------DGYCLVKEVNK-AKDIFNLMVKRGV----------SPDVQS 162
+G+ V + AK + ++ G+ S D+QS
Sbjct: 311 GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQS 370
Query: 163 YTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMH 222
IIIN K ++ A L + + S + D + + S+IDG + G +S A+ L ++H
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 223 HRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDG-------- 274
+ D +T+ ++ L ++ +A +L+ ++ G+KP TY++L+
Sbjct: 428 DK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Query: 275 -----------------------------LCKVGRLKDAQEIFQDILIKGYNVTVQAYTV 305
K G ++DA EIF ++ K ++
Sbjct: 484 QGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNS 539
Query: 306 MINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
MI G GL D+AL L +M SG+ P++VT+ ++ A G +G +L + M
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 173/371 (46%), Gaps = 53/371 (14%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
L R++ K +VV +T ++ +LC D DA +L+ EM + N V++ +L+ G G
Sbjct: 130 LFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGD 184
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+++A + + M + +V ++N ++ + ++EAK +F M ++ N V+++S
Sbjct: 185 MEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTS 236
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEM---- 186
++ GYC +V +A +F M +R ++ S+T +I+G ++ EA L EM
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 187 -----HSEKIIADTICYNSLIDGLCKLGR------ISDAWKLVNEMHHRGTPPDVITYNP 235
+ E +I+ L +LG IS+ W+ V+ D
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH--------DGRLAKS 344
Query: 236 LLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKG 295
L+ + S + A +L+ E D+ + I+I+ K G L+ A+ +F+ + K
Sbjct: 345 LVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFERV--KS 396
Query: 296 YNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGE 355
+ V ++T MI+GY + G A L K+ D VT+ ++I L + +
Sbjct: 397 LHDKV-SWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAA 451
Query: 356 KLLREMVARGL 366
LL +MV GL
Sbjct: 452 SLLSDMVRCGL 462
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 140/296 (47%), Gaps = 30/296 (10%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYS-----------------EMVAKRIPP--N 54
+L K V MY + L+++++DL S E + +R+ +
Sbjct: 340 RLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD 399
Query: 55 AVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFA 114
V++TS+I G+ G + +A GL ++ D + T+ +++ L + EA ++ +
Sbjct: 400 KVSWTSMIDGYLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLS 455
Query: 115 VMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGV--SPDVQSYTIIINGLCK 172
M++ G+KP +YS L+ +++ K I ++ K PD+ +++ K
Sbjct: 456 DMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAK 515
Query: 173 IKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVIT 232
+++A+++ +M + DT+ +NS+I GL G A L EM G P+ +T
Sbjct: 516 CGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 233 YNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTYTILIDGLCKVGRLKDAQEI 287
+ +L S + + + L K +++ I+P + Y +ID L + G+LK+A+E
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEF 627
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 177/402 (44%), Gaps = 83/402 (20%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
++V ++ K + +++A+ L+ EM P N V++T ++ C G+ + AV L
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELF 161
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGV----------------- 121
+EM + V ++N LV L + G++++AK VF M + V
Sbjct: 162 DEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 122 ----------KPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLC 171
+ N V+++S++ GYC +V +A +F M +R ++ S+T +I+G
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFA 273
Query: 172 KIKMVDEAWKLLDEM---------HSEKIIADTICYNSLIDGLCKLGR------ISDAWK 216
++ EA L EM + E +I+ L +LG IS+ W+
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 217 LVNE--------MHHRGTPP-------------DVITYNPLLDVLCKSHNVDKAIALIKE 255
V+ +H + D+ + N +++ K+ ++++A L +
Sbjct: 334 TVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFER 393
Query: 256 IQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGL 315
++ D ++T +IDG + G + A +FQ + K VT +TVMI+G + L
Sbjct: 394 VKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD-GVT---WTVMISGLVQNEL 446
Query: 316 CDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKL 357
EA +L+S M G P TY +++ + D+G+ +
Sbjct: 447 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 136/259 (52%), Gaps = 25/259 (9%)
Query: 69 GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
G L A LL+++ + V + L+ K G + EA+ +F VM ++ N V+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTC 111
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS 188
++++ GY + +N+A +F M K +V S+T+++ LC ++A +L DEM
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 189 EKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDK 248
+++ +N+L+ GL + G + A ++ + M R DV+++N ++ ++ +++
Sbjct: 167 RNVVS----WNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEE 218
Query: 249 AIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN 308
A L ++ ++ +V T+T ++ G C+ G +++A +F ++ + + ++T MI+
Sbjct: 219 AKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMIS 270
Query: 309 GYCKEGLCDEALALISKME 327
G+ L EAL L +M+
Sbjct: 271 GFAWNELYREALMLFLEMK 289
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 18/316 (5%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G+ S A L ++ L D V +T +I L +++L ++A L S+MV + P TY+ L
Sbjct: 414 GDVSRAFGLFQK-LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRM---DVEVHTFNILVDALCKEGNVKEAKNVFAVMMK 118
+ L Q ++ +I K D ++ N LV K G +++A +FA M
Sbjct: 473 LSSAGATSNLDQGKH-IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-- 529
Query: 119 QGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDE 178
V+ +TVS++S++ G +KA ++F M+ G P+ ++ +++ ++
Sbjct: 530 --VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 179 AWKLLDEMHSEKIIADTI-CYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLL 237
+L M I I Y S+ID L + G++ +A + ++ + PD Y LL
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPF---TPDHTVYGALL 644
Query: 238 DVLCKSHNVDK---AIALIKEIQDQGIKP-DVFTYTILIDGLCKVGRLKDAQEIFQDILI 293
LC + DK IA ++ + P + + L + +GR +E+ +++ I
Sbjct: 645 G-LCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 294 KGYNVTVQAYTVMING 309
KG T V++NG
Sbjct: 704 KGVKKTPGCSWVVVNG 719
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 153 KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRIS 212
+RG S + +I+ L + +V A LLD++ I + + SL+ K G +
Sbjct: 39 RRGFSNE---EALILRRLSEGGLV-HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLD 94
Query: 213 DAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
+A L M R +++T N +L K +++A L +E+ +V ++T+++
Sbjct: 95 EARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVML 145
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
LC GR +DA E+F ++ + V ++ ++ G + G ++A + M S
Sbjct: 146 TALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--- 198
Query: 333 PDAVTYEIIIRALFEKGENDKGEKLLREM 361
D V++ +I+ E ++ + L +M
Sbjct: 199 -DVVSWNAMIKGYIENDGMEEAKLLFGDM 226
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 14/284 (4%)
Query: 80 EMILKRMDVEVHTFNILVDALC--KEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCL 137
EM + + + HTF + A K G++ K + ++ G+ + + ++L+ Y L
Sbjct: 105 EMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSL 164
Query: 138 VKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTIC 197
+ ++ A +F+ +R DV +Y ++I+GL K + + A +L D M + D +
Sbjct: 165 IAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRARELFDSMP----LRDLVS 216
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQ 257
+NSLI G ++ +A KL +EM G PD + L +S + K A+ +
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTK 276
Query: 258 DQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCD 317
+ + D F T L+D K G + A EIF+ K T+ + MI G G +
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGE 332
Query: 318 EALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
+ KM SSG PD VT+ ++ G D+ L +M
Sbjct: 333 LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
D+V + ++I + +A L+ EMVA + P+ V S + G Q+ +
Sbjct: 213 DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIH 272
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
+ KR+ ++ LVD K G + A +F + + + ++++++ G +
Sbjct: 273 DYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL----FTWNAMITGLAMH 328
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHS-EKIIADTIC 197
D F MV G+ PD ++ ++ G +VDEA L D+M S + +
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 198 YNSLIDGLCKLGRISDAWKLVNEMHHRG 225
Y + D L + G I +A +++ +M G
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDG 416
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 13/354 (3%)
Query: 11 LRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQ 70
LR + + D + T + S ++ VS L+ + +LI+ +C+ G+
Sbjct: 116 LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK 175
Query: 71 LQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSS 130
+ A + +EM V+ TF+ L++ + A ++F +M K V N + S
Sbjct: 176 ISDARKVFDEM---PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLS 232
Query: 131 LMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK 190
+ + +++ A+ L +K G+ D+ T +I K + A ++ D
Sbjct: 233 FLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDC----A 288
Query: 191 IIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAI 250
I D + +N +ID K G + + L+ +M + P+ T+ LL S
Sbjct: 289 IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 251 ALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGY 310
+ ++++ I D T L+D KVG L+ A EIF + K V+++T MI+GY
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK----DVKSWTAMISGY 404
Query: 311 CKEGLCDEALALISKMESSG--RMPDAVTYEIIIRALFEKGENDKGEKLLREMV 362
GL EA+ L +KME P+ +T+ +++ A G +G + + MV
Sbjct: 405 GAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 46/269 (17%)
Query: 105 NVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYT 164
+++ A ++F + N +++++ GY + E +A +FN + +G++ D S+
Sbjct: 74 DIRYASSIF----EHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFI 129
Query: 165 IIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHR 224
+ + V L + T N+LI C G+ISDA K+ +EM
Sbjct: 130 TTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQ- 188
Query: 225 GTPPDVITYNPLLD----------------VLCKSH---NVDKAIALIKEIQDQ------ 259
D +T++ L++ ++ KS NV ++ + I D
Sbjct: 189 --SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 260 ----------GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMING 309
G+ D+ T LI K G + A+ IF D I+ VT + MI+
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF-DCAIRKDVVT---WNCMIDQ 302
Query: 310 YCKEGLCDEALALISKMESSGRMPDAVTY 338
Y K GL +E + L+ +M+ P++ T+
Sbjct: 303 YAKTGLLEECVWLLRQMKYEKMKPNSSTF 331
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 159/384 (41%), Gaps = 47/384 (12%)
Query: 13 RQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQ 72
R+L D+ +T+II SL + + +++D++ EM K + P+ V + LI + +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 73 QAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLM 132
Q +I ++ N L+ CK + A+ +F + ++G N ++++++
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG---NKEAWNTML 405
Query: 133 DGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKII 192
GY +K K ++F + G+ D S T +I+ I V L + +
Sbjct: 406 KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 193 ADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIAL 252
NSLID K+G ++ AW++ E +VIT+N ++ +KAIAL
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCE-----ADTNVITWNAMIASYVHCEQSEKAIAL 520
Query: 253 IKEIQDQGIKPDVFTY-----------------------------------TILIDGLCK 277
+ + KP T LID K
Sbjct: 521 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 580
Query: 278 VGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVT 337
G L+ ++E+F G + VMI+GY G + A+AL +ME S P T
Sbjct: 581 CGHLEKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 338 YEIIIRALFEKGENDKGEKLLREM 361
+ ++ A G ++G+KL +M
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKM 660
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 1 MGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTS 60
MG+ + A + +V+ + +I S + A L+ MV++ P+++T +
Sbjct: 481 MGDLTVAWRMFCE--ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 61 LIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNI-----LVDALCKEGNVKEAKNVFAV 115
L+ G L++ +MI + + H N+ L+D K G++++++ +F
Sbjct: 539 LLMACVNTGSLERG-----QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-- 591
Query: 116 MMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKM 175
G + + V ++ ++ GY + +V A +F+ M + V P ++ +++ +
Sbjct: 592 --DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 176 VDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNP 235
V++ KL +MH + + Y+ L+D L + G + +A V M PD + +
Sbjct: 650 VEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPF---SPDGVIWGT 706
Query: 236 LLDVLCKSHN--------VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQE 286
LL C +H ++A+A + Q+ G Y +L + G+ ++A+
Sbjct: 707 LLSS-CMTHGEFEMGIRMAERAVA--SDPQNDGY------YIMLANMYSAAGKWEEAER 756
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/344 (18%), Positives = 145/344 (42%), Gaps = 18/344 (5%)
Query: 23 YTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMI 82
+ T++ K K +L+ ++ I ++ + TS+I +G + L ++
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 83 LKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVN 142
+D+ + N L+D K G++ A +F N +++++++ Y ++
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-----ADTNVITWNAMIASYVHCEQSE 515
Query: 143 KAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA---WKLLDEMHSEKIIADTICYN 199
KA +F+ MV P + ++ ++ + + E E ++ +
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA--- 572
Query: 200 SLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ 259
+LID K G + + E+ G D + +N ++ +V+ AIAL ++++
Sbjct: 573 ALIDMYAKCGHLEKS----RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 260 GIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEA 319
+KP T+ L+ G ++ +++F + ++ Y+ +++ + G +EA
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEA 688
Query: 320 LALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
+ + M S PD V + ++ + GE + G ++ VA
Sbjct: 689 ESTVMSMPFS---PDGVIWGTLLSSCMTHGEFEMGIRMAERAVA 729
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 160/323 (49%), Gaps = 21/323 (6%)
Query: 36 VSDAYDLYSEMVAKRIP-PNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFN 94
VS AY L+ +IP P+ V + ++I G+ V + V L M+ + + + HTF
Sbjct: 84 VSYAYKLFV-----KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFP 138
Query: 95 ILVDALCKEGNVKE-AKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVK 153
L++ L ++G K + ++K G+ N ++L+ Y L ++ A+ +F+
Sbjct: 139 FLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD---- 194
Query: 154 RGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISD 213
R DV S+ ++I+G ++K +E+ +LL EM +++ T L+ C + D
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKD 253
Query: 214 AWKLVNE-MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILI 272
K V+E + T P + N L++ +D A+ + + ++ + DV ++T ++
Sbjct: 254 LCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIV 309
Query: 273 DGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM 332
G + G LK A+ F + ++ ++T+MI+GY + G +E+L + +M+S+G +
Sbjct: 310 KGYVERGNLKLARTYFDQMPVRDR----ISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 333 PDAVTYEIIIRALFEKGENDKGE 355
PD T ++ A G + GE
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGE 388
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 12/321 (3%)
Query: 41 DLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDAL 100
D+ + +R + ++ +I G+ + + ++++ LL EM + T +++ A
Sbjct: 187 DMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSAC 246
Query: 101 CKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDV 160
K + K V + + +P+ ++L++ Y E++ A IF M R DV
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DV 302
Query: 161 QSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNE 220
S+T I+ G + + A D+M + D I + +IDG + G +++ ++ E
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 221 MHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGR 280
M G PD T +L +++ + I IK DV LID K G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 281 LKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEI 340
+ AQ++F D+ + +T M+ G G EA+ + +M+ PD +TY
Sbjct: 419 SEKAQKVFHDMDQRDKFT----WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 341 IIRALFEKGENDKGEKLLREM 361
++ A G D+ K +M
Sbjct: 475 VLSACNHSGMVDQARKFFAKM 495
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 154/351 (43%), Gaps = 25/351 (7%)
Query: 1 MGETSAALELL---RRQLVKPDVVMYTTIIDSLCKDK---LVSDAYDLYSEMVAKRIPPN 54
M E ++ELL R LV P V ++ + K K L ++ SE + P+
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC---KTEPS 270
Query: 55 AVTYTSLIYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFA 114
+L+ + G++ AV + M + +V ++ +V + GN+K A+ F
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFD 326
Query: 115 VMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIK 174
M + + +S++ ++DGY N++ +IF M G+ PD + ++ +
Sbjct: 327 QMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 175 MVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYN 234
++ + + KI D + N+LID K G A K+ ++M R D T+
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWT 438
Query: 235 PLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIK 294
++ L + +AI + ++QD I+PD TY ++ G + A++ F +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 295 GY-NVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRA 344
++ Y M++ + GL EA ++ KM + P+++ + ++ A
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN---PNSIVWGALLGA 546
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 161/351 (45%), Gaps = 18/351 (5%)
Query: 18 PD--VVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAV 75
PD VV +T + +A DL+ +MV + P++ ++ VG L
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 76 GLLNEMILKRMDVEVHTF--NILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMD 133
++ M + M+++ ++F LV+ K G +++A++VF M V+ + V++S+++
Sbjct: 233 WIVKYM--EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQ 286
Query: 134 GYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIA 193
GY + ++F M++ + PD S ++ + +D + + + +
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT 346
Query: 194 DTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALI 253
+ N+LID K G ++ +++ EM + D++ N + L K+ +V + A+
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 254 KEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDI-LIKGYNVTVQAYTVMINGYCK 312
+ + GI PD T+ L+ G G ++D F I + TV+ Y M++ + +
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 313 EGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVA 363
G+ D+A LI M P+A+ + ++ + E +L+E++A
Sbjct: 463 AGMLDDAYRLICDMPMR---PNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/364 (18%), Positives = 145/364 (39%), Gaps = 47/364 (12%)
Query: 10 LLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVG 69
LL P++ +Y ++I+ + L + DL+ + + + T+ L+ C
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTF-PLVLKACTRA 124
Query: 70 QLQQAVGLLNEMILK-RMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSY 128
++ L+ +++K + +V L+ G + +A +F + + V V++
Sbjct: 125 SSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV----VTW 180
Query: 129 SSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEA-W--KLLDE 185
++L GY +A D+F MV+ GV PD +++ + +D W K ++E
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 186 MHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHN 245
M +K ++ +L++ K G++ A + + M D++T++ ++ +
Sbjct: 241 MEMQK---NSFVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSF 293
Query: 246 VDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLK---------DAQEIFQDILI--- 293
+ I L ++ + +KPD F+ + +G L D E ++ +
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 294 ------------KGYNV-------TVQAYTVMINGYCKEGLCDEALALISKMESSGRMPD 334
+G+ V + I+G K G + A+ + E G PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 335 AVTY 338
T+
Sbjct: 414 GSTF 417
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 8/221 (3%)
Query: 141 VNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNS 200
VN K I ++ + D T ++N L K + K + S + YNS
Sbjct: 26 VNHLKQIHVSLINHHLHHD----TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNS 81
Query: 201 LIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQG 260
LI+G + L + G T+ +L ++ + I L + G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 261 IKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEAL 320
DV T L+ GRL DA ++F +I + +V +T + +GY G EA+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAI 197
Query: 321 ALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREM 361
L KM G PD+ ++ A G+ D GE +++ M
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 14 QLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCI----VG 69
++ + +VV +T +I + S+A +++EM+ PN T+ +++ CI +G
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS-CIRASGLG 170
Query: 70 QLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYS 129
+Q GL+ + D + + L+D K G +KEA+ +F + ++ V VS +
Sbjct: 171 LGKQIHGLI---VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV----VSCT 223
Query: 130 SLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSE 189
+++ GY + +A ++F+ + G+SP+ +Y ++ L + ++D + +
Sbjct: 224 AIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 190 KIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKA 249
++ + NSLID K G +S A +L + M R I++N +L K +
Sbjct: 284 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER----TAISWNAMLVGYSKHGLGREV 339
Query: 250 IALIKEIQDQG-IKPDVFTYTILIDGLCKVGRLKDAQ-EIFQDILIKGYNVT--VQAYTV 305
+ L + ++D+ +KPD T ++ G C GR++D IF ++ Y + Y
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSG-CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 306 MINGYCKEGLCDEALALISKMES 328
+++ + G DEA I +M S
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRMPS 421
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 60/328 (18%)
Query: 52 PPNAVTYTSL-IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAK 110
P N V T L I C G+LQ+A L EM + ++ H ++ L++A + +++ +
Sbjct: 16 PTNYVLQTILPISQLCSNGRLQEA---LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQ 72
Query: 111 NVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNLMVKRGVSPDVQSYTIIINGL 170
V A M+K P T +++ +I G
Sbjct: 73 RVHAHMIKTRYLPATY---------------------------------LRTRLLIFYGK 99
Query: 171 CKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDV 230
C +++A K+LDEM + +++ + ++I + G S+A + EM P+
Sbjct: 100 CDC--LEDARKVLDEMPEKNVVS----WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNE 153
Query: 231 ITYNPLLDVLCKSHNVDKAIALIKEIQDQGIK----PDVFTYTILIDGLCKVGRLKDAQE 286
T+ +L ++ + L K+I +K +F + L+D K G++K+A+E
Sbjct: 154 FTFATVLTSCIRA----SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 287 IFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRMPDAVTYEIIIR--- 343
IF+ + + V + T +I GY + GL +EAL + ++ S G P+ VTY ++
Sbjct: 210 IFECLPER----DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 344 --ALFEKGENDKGEKLLREMVARGLLYN 369
AL + G+ L RE+ +L N
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQN 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 15/278 (5%)
Query: 15 LVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQA 74
L + DVV T II + L +A +++ + ++ + PN VTY SL+ + L
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG 273
Query: 75 VGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDG 134
++ + + N L+D K GN+ A+ +F M ++ +S+++++ G
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER----TAISWNAMLVG 329
Query: 135 YCLVKEVNKAKDIFNLMV-KRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEK--I 191
Y + ++F LM ++ V PD + +++G +M D + D M + +
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 192 IADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSH-NVDKAI 250
T Y ++D L + GRI +A++ + M + P LL C+ H +VD
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRM---PSKPTAGVLGSLLGA-CRVHLSVDIGE 445
Query: 251 ALIKEIQDQGIKPD-VFTYTILIDGLCKVGRLKDAQEI 287
++ + + + I+P+ Y IL + GR D +
Sbjct: 446 SVGRRLIE--IEPENAGNYVILSNLYASAGRWADVNNV 481
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 159/321 (49%), Gaps = 32/321 (9%)
Query: 27 IDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLLNEMILKRM 86
I L + + +A L+ +K I ++ S++ G+ + A L +EM
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEMP---- 75
Query: 87 DVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKD 146
D + ++N LV K G + EA+ VF +M ++ N VS+++L+ GY +V+ A+
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAES 131
Query: 147 IFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLC 206
+F M ++ + S+T+++ G + +D+A KL EM +K D I S+I GLC
Sbjct: 132 LFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLC 183
Query: 207 KLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVF 266
K GR+ +A ++ +EM R VIT+ ++ +++ VD A ++I D +
Sbjct: 184 KEGRVDEAREIFDEMSERS----VITWTTMVTGYGQNNRVDDA----RKIFDVMPEKTEV 235
Query: 267 TYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKM 326
++T ++ G + GR++DA+E+F+ + +K V A MI+G ++G +A + M
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 327 ESSGRMPDAVTYEIIIRALFE 347
+ +I R FE
Sbjct: 292 KERNDASWQTVIKIHERNGFE 312
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 174/379 (45%), Gaps = 64/379 (16%)
Query: 19 DVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIVGQLQQAVGLL 78
+VV +T ++ + V A L+ +M K N V++T ++ GF G++ A L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 79 NEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKQGVKPNTVSYSSLMDGYCLV 138
EMI + ++ + ++ LCKEG V EA+ +F M ++ V +++++++ GY
Sbjct: 165 -EMIPDKDNIARTS---MIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQN 216
Query: 139 KEVNKAKDIFNLMVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICY 198
V+ A+ IF++M ++ S+T ++ G + +++A +L + M + +IA C
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA---C- 268
Query: 199 NSLIDGLCKLGRISDAWKLVNEMHHRGTPPDVITYNPLLDVLCKSHNVDKAIALIKEIQD 258
N++I GL + G I+ A ++ + M R ++ ++ + ++ +A+ L +Q
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFILMQK 324
Query: 259 QGIKP-----------------------------------DVFTYTILIDGLCKVGRLKD 283
QG++P DV+ ++L+ K G L
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 284 AQEIFQDILIKGYNVTVQAYTVMINGYCKEGLCDEALALISKMESSGRM-PDAVTYEIII 342
++ IF K + + +I+GY GL +EAL + +M SG P+ VT+ +
Sbjct: 385 SKLIFDRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 343 RALFEKGENDKGEKLLREM 361
A G ++G K+ M
Sbjct: 441 SACSYAGMVEEGLKIYESM 459
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 140/326 (42%), Gaps = 46/326 (14%)
Query: 2 GETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSL 61
G A E+ ++ + V+ +TT++ ++ V DA ++ M K V++TS+
Sbjct: 186 GRVDEAREIFD-EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSM 240
Query: 62 IYGFCIVGQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVF-------- 113
+ G+ G+++ A L M +K V N ++ L ++G + +A+ VF
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 114 -----------------------AVMMKQGVKPNTVSYSSLMDGYCLVKEVNKAKDIFNL 150
+M KQGV+P + S++ + ++ K +
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 151 MVKRGVSPDVQSYTIIINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGR 210
+V+ DV ++++ K + ++ + D S+ D I +NS+I G G
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK----DIIMWNSIISGYASHGL 412
Query: 211 ISDAWKLVNEMHHRG-TPPDVITYNPLLDVLCKSHNVDKAIALIKEIQDQ-GIKPDVFTY 268
+A K+ EM G T P+ +T+ L + V++ + + + ++ G+KP Y
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 269 TILIDGLCKVGRLKDAQEIFQDILIK 294
++D L + GR +A E+ + ++
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVE 498