Miyakogusa Predicted Gene
- Lj0g3v0267459.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0267459.1 Non Chatacterized Hit- tr|F6HW90|F6HW90_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.49,2e-19,BRX,Brevis radix-like domain; REGULATOR OF CHROMOSOME
CONDENSATION (RCC1),NULL; REGULATOR OF CHROMOS,CUFF.17657.1
(169 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 174 3e-44
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 174 3e-44
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 157 2e-39
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 86 1e-17
AT5G20540.1 | Symbols: ATBRXL4, BRX-LIKE4, BRXL4 | BREVIS RADIX-... 86 2e-17
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 82 1e-16
AT1G54180.2 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 ... 80 6e-16
AT3G14000.2 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resista... 80 9e-16
AT3G14000.1 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resista... 80 9e-16
AT1G54180.1 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 ... 80 9e-16
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 78 3e-15
AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 | ch... 77 7e-15
AT1G31880.1 | Symbols: NLM9, BRX | DZC (Disease resistance/zinc ... 76 8e-15
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 75 1e-14
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 59 2e-09
AT4G16990.3 | Symbols: RLM3 | disease resistance protein (TIR-NB... 56 9e-09
AT4G16990.4 | Symbols: RLM3 | disease resistance protein (TIR-NB... 56 9e-09
AT4G16990.5 | Symbols: RLM3 | disease resistance protein (TIR-NB... 56 9e-09
AT4G16990.2 | Symbols: RLM3 | disease resistance protein (TIR-NB... 56 1e-08
AT2G21030.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Disease re... 54 7e-08
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 174 bits (441), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 123/172 (71%), Gaps = 6/172 (3%)
Query: 1 MAERLPIGATRNVRSPSLASFGSDLGSNDVTNATIDQLTIQTRSQESDLTGSNDQLLSNG 60
MAERLP+G+ R V+SPSL SFGS ++ T+++ +R +SD + + + SNG
Sbjct: 937 MAERLPVGSARTVKSPSLNSFGSSPDYAAPSSNTLNR--PNSRETDSD-SLTTVPMFSNG 993
Query: 61 SSTITNRSAGHGKHSQ--SNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVI 118
+ST S + + + + A +R ++K++E RNE EWVEQDEPGVYITLT+L G
Sbjct: 994 TSTPVFDSGSYRQQANHAAEAINRISTRSKESEPRNENEWVEQDEPGVYITLTALAGGAR 1053
Query: 119 DLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRL-IDKSSIGVGSEELAH 169
DLKRVRFSRKRFSEKQAE+WWAENR RVYE YNVR+ +DKSS+GVGSE+L H
Sbjct: 1054 DLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIVVDKSSVGVGSEDLGH 1105
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 174 bits (440), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 123/172 (71%), Gaps = 6/172 (3%)
Query: 1 MAERLPIGATRNVRSPSLASFGSDLGSNDVTNATIDQLTIQTRSQESDLTGSNDQLLSNG 60
MAERLP+G+ R V+SPSL SFGS ++ T+++ +R +SD + + + SNG
Sbjct: 971 MAERLPVGSARTVKSPSLNSFGSSPDYAAPSSNTLNR--PNSRETDSD-SLTTVPMFSNG 1027
Query: 61 SSTITNRSAGHGKHSQ--SNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVI 118
+ST S + + + + A +R ++K++E RNE EWVEQDEPGVYITLT+L G
Sbjct: 1028 TSTPVFDSGSYRQQANHAAEAINRISTRSKESEPRNENEWVEQDEPGVYITLTALAGGAR 1087
Query: 119 DLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRL-IDKSSIGVGSEELAH 169
DLKRVRFSRKRFSEKQAE+WWAENR RVYE YNVR+ +DKSS+GVGSE+L H
Sbjct: 1088 DLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIVVDKSSVGVGSEDLGH 1139
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 157 bits (398), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 105/160 (65%), Gaps = 23/160 (14%)
Query: 1 MAERLPIGATRNVRSP-SLASFGSDLGSNDVTNATIDQLTIQTRSQESDLTGSNDQLLSN 59
MAERLP+G+ R V+SP SL SFGS G D N + Q SQES+ G + SN
Sbjct: 933 MAERLPVGSARTVKSPPSLNSFGSSPGRIDPFN-----ILNQANSQESEPNGITTPMFSN 987
Query: 60 GSSTITNRSAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVID 119
G+ T + G+G+ + NE+RNE EWVEQDEPGVYITLT+L G D
Sbjct: 988 GTMT---PAFGNGEAT--------------NEARNEKEWVEQDEPGVYITLTALAGGARD 1030
Query: 120 LKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKSS 159
LKRVRFSRKRFSE QAEQWWA+NR RVYE YNVR++DK+S
Sbjct: 1031 LKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKAS 1070
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 7/80 (8%)
Query: 76 QSNATSR---NGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSE 132
++N TS+ NG++ ++++ E V QDEPGVY+TL SLPG +LKRVRFSRK+F+E
Sbjct: 963 ENNLTSKSFANGHRKQNDKP----EKVVQDEPGVYLTLLSLPGGGTELKRVRFSRKQFTE 1018
Query: 133 KQAEQWWAENRARVYELYNV 152
+QAE+WW EN A+V E +N+
Sbjct: 1019 EQAEKWWGENGAKVCERHNI 1038
>AT5G20540.1 | Symbols: ATBRXL4, BRX-LIKE4, BRXL4 | BREVIS
RADIX-like 4 | chr5:6947943-6951760 FORWARD LENGTH=384
Length = 384
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 45/61 (73%)
Query: 90 NESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEL 149
N S + EWVEQDEPGVYIT+ LPG +L+RVRFSR+RF E A WW ENRAR++E
Sbjct: 323 NASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQ 382
Query: 150 Y 150
Y
Sbjct: 383 Y 383
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 91 ESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELY 150
E + EWV Q EPGV IT SLPG DLKR+RFSR F++ QA++WWA+N +V ELY
Sbjct: 145 EEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELY 204
Query: 151 NVRLIDKSSIGV 162
NV+ + + + +
Sbjct: 205 NVQKLSRQAFPL 216
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 77 SNATSRNGYKTKDNESRNET-EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQA 135
S A +R GY NE+++ + E VEQ EPGVYIT T+LP LKRVRFSRKRFSEK+A
Sbjct: 930 SPAITRTGYL--QNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEA 987
Query: 136 EQWWAENRARVYELYNVRL 154
++WW E + VY Y+ +
Sbjct: 988 QRWWEEKQVLVYNKYDAEI 1006
>AT1G54180.2 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 |
chr1:20227697-20229728 FORWARD LENGTH=344
Length = 344
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 57 LSNGSSTITNRSAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGD 116
LS+ S T T S+ G ++S++ R+ + N S E+EWVEQDEPG+YIT+ +LP
Sbjct: 251 LSSISGTKTETSSIDGS-ARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDG 309
Query: 117 VIDLKRVRFSRKRFSEKQAEQWWAENRARVYELY 150
+L+RVRFSR +F E A WW +NRAR+ + Y
Sbjct: 310 NRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 343
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLID 156
EWV Q EPGV IT SLP DLKR+RFSR+ F++ QA++WW EN +V ELYNV+
Sbjct: 141 EWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQKWWVENFEKVMELYNVQFNQ 200
Query: 157 KS 158
+S
Sbjct: 201 QS 202
>AT3G14000.2 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease
resistance/zinc finger/chromosome condensation-like
region) domain containing protein | chr3:4631170-4633353
REVERSE LENGTH=374
Length = 374
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLID 156
EWV Q EPGV IT SLP D+KR+RFSR+ F + QA++WWAEN +V ELYNV+ +
Sbjct: 144 EWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFN 203
Query: 157 KSSI 160
+ S+
Sbjct: 204 QQSV 207
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 90 NESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEL 149
N S ETEWVEQDE GVYIT+ +LP +L+RVRFSR++F E A WW +NRAR+ +
Sbjct: 313 NASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQ 372
Query: 150 Y 150
Y
Sbjct: 373 Y 373
>AT3G14000.1 | Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease
resistance/zinc finger/chromosome condensation-like
region) domain containing protein | chr3:4631170-4633353
REVERSE LENGTH=374
Length = 374
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLID 156
EWV Q EPGV IT SLP D+KR+RFSR+ F + QA++WWAEN +V ELYNV+ +
Sbjct: 144 EWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFN 203
Query: 157 KSSI 160
+ S+
Sbjct: 204 QQSV 207
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 90 NESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEL 149
N S ETEWVEQDE GVYIT+ +LP +L+RVRFSR++F E A WW +NRAR+ +
Sbjct: 313 NASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQ 372
Query: 150 Y 150
Y
Sbjct: 373 Y 373
>AT1G54180.1 | Symbols: ATBRXL3, BRX-LIKE3 | BREVIS RADIX-like 3 |
chr1:20227697-20229728 FORWARD LENGTH=370
Length = 370
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 57 LSNGSSTITNRSAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGD 116
LS+ S T T S+ G ++S++ R+ + N S E+EWVEQDEPG+YIT+ +LP
Sbjct: 277 LSSISGTKTETSSIDGS-ARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDG 335
Query: 117 VIDLKRVRFSRKRFSEKQAEQWWAENRARVYELY 150
+L+RVRFSR +F E A WW +NRAR+ + Y
Sbjct: 336 NRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 26/88 (29%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRF--------------------------SRKRF 130
EWV Q EPGV IT SLP DLKR+RF R+ F
Sbjct: 141 EWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYYRDQLLLWCRQGWVFWPQNCREMF 200
Query: 131 SEKQAEQWWAENRARVYELYNVRLIDKS 158
++ QA++WW EN +V ELYNV+ +S
Sbjct: 201 NKWQAQKWWVENFEKVMELYNVQFNQQS 228
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%)
Query: 95 ETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRL 154
E EW+EQ EPGVYITL +L DLKRVRFSR+RF E+QAE WW+ENR RVYE YN+R
Sbjct: 998 EAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKYNIRG 1057
Query: 155 IDKSSI 160
D+SS+
Sbjct: 1058 TDRSSV 1063
>AT2G35600.1 | Symbols: ATBRXL1, BRXL1 | BREVIS RADIX-like 1 |
chr2:14941092-14943281 REVERSE LENGTH=331
Length = 331
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLID 156
EW+ Q EPGV+IT SLP DLKR+RFSR+ F + QA++WW EN R+ ELYNV+ +
Sbjct: 138 EWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFN 197
Query: 157 KSSI 160
+ ++
Sbjct: 198 RQAL 201
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 80 TSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWW 139
+SR+ + N S + EWVE+DEPGVYIT+ LP +L+RVRFSR+RF E A+ WW
Sbjct: 260 SSRDEPPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWW 319
Query: 140 AENRARVYELY 150
+NR R+ Y
Sbjct: 320 EQNRDRIQTQY 330
>AT1G31880.1 | Symbols: NLM9, BRX | DZC (Disease resistance/zinc
finger/chromosome condensation-like region) domain
containing protein | chr1:11447804-11450053 FORWARD
LENGTH=344
Length = 344
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 97 EWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLID 156
EW+ Q EPGV+IT SLP DLKR+RFSR+ F + QA++WW EN ++ ELYNV+ +
Sbjct: 140 EWMAQVEPGVHITFASLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFN 199
Query: 157 KSSI 160
+ ++
Sbjct: 200 RQAL 203
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 75 SQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQ 134
+++ +SR+ + N S + EW+E+DEPGVYIT+ L +L+RVRFSR+RF E
Sbjct: 268 ARTTTSSRDDPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVH 327
Query: 135 AEQWWAENRARVYELY 150
A+ WW +NR R+ Y
Sbjct: 328 AKTWWEQNRERIQTQY 343
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Query: 54 DQLLSNGSSTITNR-SAGHGKHSQSNATSRNGYKTKDNESRNETEWVEQDEPGVYITLTS 112
D LS+ S I+ R +++ N +S+ G +N ++ E EW+EQ EPGVYITL +
Sbjct: 983 DPRLSSSGSVISERIEPFQFQNNSDNGSSQTGV---NNTNQVEAEWIEQYEPGVYITLVA 1039
Query: 113 LPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKSS 159
L DL+RVRFSR+RF E QAE WW+ENR +VYE YNVR+ +KS+
Sbjct: 1040 LHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKST 1086
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation (RCC1)
family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 100 EQDEPGVYITL-TSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELY 150
EQ EPGVY+T + G+ I +RVRFS+KRF E QAE WW +N+ R+ + Y
Sbjct: 952 EQFEPGVYVTYEVDMNGNKI-FRRVRFSKKRFDEHQAEDWWTKNKDRLLKCY 1002
>AT4G16990.3 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=638
Length = 638
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 99 VEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKS 158
E E GVYITL L G +I LK + FSR+ +QA+ WW+EN +VY+ +N+ IDKS
Sbjct: 564 FEYCEQGVYITLGILSGGIIVLKHLEFSRRM--AQQAKVWWSENWIKVYQEHNICGIDKS 621
Query: 159 SIG 161
G
Sbjct: 622 FDG 624
>AT4G16990.4 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=643
Length = 643
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 99 VEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKS 158
E E GVYITL L G +I LK + FSR+ +QA+ WW+EN +VY+ +N+ IDKS
Sbjct: 569 FEYCEQGVYITLGILSGGIIVLKHLEFSRRM--AQQAKVWWSENWIKVYQEHNICGIDKS 626
Query: 159 SIG 161
G
Sbjct: 627 FDG 629
>AT4G16990.5 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9561113-9565225 FORWARD
LENGTH=637
Length = 637
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 99 VEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKS 158
E E GVYITL L G +I LK + FSR+ +QA+ WW+EN +VY+ +N+ IDKS
Sbjct: 563 FEYCEQGVYITLGILSGGIIVLKHLEFSRRM--AQQAKVWWSENWIKVYQEHNICGIDKS 620
Query: 159 SIG 161
G
Sbjct: 621 FDG 623
>AT4G16990.2 | Symbols: RLM3 | disease resistance protein (TIR-NBS
class), putative | chr4:9560155-9565225 FORWARD
LENGTH=796
Length = 796
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 99 VEQDEPGVYITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKS 158
E E GVYITL L G +I LK + FSR+ +QA+ WW+EN +VY+ +N+ IDKS
Sbjct: 722 FEYCEQGVYITLGILSGGIIVLKHLEFSRRM--AQQAKVWWSENWIKVYQEHNICGIDKS 779
Query: 159 SIG 161
G
Sbjct: 780 FDG 782
>AT2G21030.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Disease
resistance/zinc finger/chromosome condensation-like
region (InterPro:IPR013591); BEST Arabidopsis thaliana
protein match is: DZC (Disease resistance/zinc
finger/chromosome condensation-like region) domain
containing protein (TAIR:AT1G31880.1); Has 250 Blast
hits to 250 proteins in 17 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr2:9024904-9025578 REVERSE LENGTH=158
Length = 158
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 107 YITLTSLPGDVIDLKRVRFSRKRFSEKQAEQWWAENRARVYELYNVRLIDKSSI 160
+IT SLP DLKR+RFSR+ +++ QA++ W EN ++ ELYNV+ ++ ++
Sbjct: 13 HITFASLPTGGNDLKRIRFSREMYNKWQAQRRWGENYDKIVELYNVQRFNRQAL 66