Miyakogusa Predicted Gene
- Lj0g3v0267429.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0267429.3 Non Chatacterized Hit- tr|I1N141|I1N141_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.47,0.0000005,RNGMNOXGNASE,Aromatic-ring hydroxylase-like;
SQUALENE MONOOXYGENASE,NULL; no description,NULL; FAD/N,CUFF.17655.3
(462 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreduc... 544 e-155
AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 | chr2:972394... 542 e-154
AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 | chr4:177440... 528 e-150
AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidoredu... 353 1e-97
AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase ... 353 2e-97
AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 | chr5:818... 346 2e-95
AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 | chr5:81... 326 3e-89
AT5G24155.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase fami... 90 3e-18
>AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding
oxidoreductase family protein | chr1:21714094-21717246
REVERSE LENGTH=531
Length = 531
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 254/338 (75%), Positives = 299/338 (88%), Gaps = 1/338 (0%)
Query: 91 DVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCV 150
DVI+VGAGV GSALA+TL KD RRVHVIERDL EPDRIVGELLQPGGYLKL+ELG++DCV
Sbjct: 62 DVIVVGAGVAGSALAYTLGKDKRRVHVIERDLSEPDRIVGELLQPGGYLKLLELGIEDCV 121
Query: 151 EQIDAQRVLGYVLFKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALPNVQME 210
E+IDAQRV GY LFK+G+ L YPL+KFH DV+G+SFHNGRFIQR+REKAA+LPNVQ+E
Sbjct: 122 EEIDAQRVYGYALFKNGKRIRLAYPLEKFHEDVSGRSFHNGRFIQRMREKAASLPNVQLE 181
Query: 211 QGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVPSCF 270
QG SLLE+ N TI GV YK K +E A+A LTIVCDGCFSNLR SLC+P+VEVPSCF
Sbjct: 182 QGTVLSLLEE-NGTIKGVRYKNKAGEEQTAFAALTIVCDGCFSNLRRSLCNPQVEVPSCF 240
Query: 271 VGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMADYLK 330
VGL+LENC LP+ N+GHV+LADPSPIL YPISSTE+RCLVD+PG KV I+NGEM +YLK
Sbjct: 241 VGLVLENCNLPYANHGHVVLADPSPILMYPISSTEVRCLVDVPGQKVPSIANGEMKNYLK 300
Query: 331 TMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGM 390
T+V PQ+P E++D+F++A+++GNI++MPN SMPA P PTPGALLMGDAFNMRHPLTGGGM
Sbjct: 301 TVVAPQMPHEVYDSFIAAVDKGNIKSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGM 360
Query: 391 TVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
TVAL+DIVVL++LL+PL DL+D ASLC+YLESFYTLRK
Sbjct: 361 TVALADIVVLRNLLRPLRDLSDGASLCKYLESFYTLRK 398
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTPP 460
A GIIFPIIKAEGVRQ FFP T+PA+Y P
Sbjct: 493 ASGIIFPIIKAEGVRQMFFPATVPAYYYKAP 523
>AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 |
chr2:9723947-9726270 REVERSE LENGTH=585
Length = 585
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/350 (72%), Positives = 300/350 (85%), Gaps = 2/350 (0%)
Query: 79 RNTTVKCSGGAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGY 138
+N + G DVIIVGAGV GSALAHTL K+GRRVHVIERD E DRIVGELLQPGGY
Sbjct: 113 KNLETEVDSGT-DVIIVGAGVAGSALAHTLGKEGRRVHVIERDFSEQDRIVGELLQPGGY 171
Query: 139 LKLIELGLQDCVEQIDAQRVLGYVLFKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLR 198
LKLIELGL+DCV++IDAQRVLGYVLFKDG+ T L YPL+ F +DV G+SFHNGRF+QR+R
Sbjct: 172 LKLIELGLEDCVKKIDAQRVLGYVLFKDGKHTKLAYPLETFDSDVAGRSFHNGRFVQRMR 231
Query: 199 EKAAALPNVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHS 258
EKA L NV++EQG TSLLE+ + TI GV Y+TK+ EF+++APLTIVCDGCFSNLR S
Sbjct: 232 EKALTLSNVRLEQGTVTSLLEE-HGTIKGVRYRTKEGNEFRSFAPLTIVCDGCFSNLRRS 290
Query: 259 LCHPKVEVPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVH 318
LC PKV+VPS FVGL+LENC+LPF N+GHV+L DPSPIL YPISS+E+RCLVD+PG K+
Sbjct: 291 LCKPKVDVPSTFVGLVLENCELPFANHGHVVLGDPSPILMYPISSSEVRCLVDVPGQKLP 350
Query: 319 PISNGEMADYLKTMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDA 378
PI+NGEMA YLKT V PQ+P ++ +AF++A+ +GNIRTMPN SMPADP PTPGALL+GDA
Sbjct: 351 PIANGEMAKYLKTRVAPQVPTKVREAFITAVEKGNIRTMPNRSMPADPIPTPGALLLGDA 410
Query: 379 FNMRHPLTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
FNMRHPLTGGGMTVAL+DIVVL+DLL+P+ +LND +L +Y+ESFYTLRK
Sbjct: 411 FNMRHPLTGGGMTVALADIVVLRDLLRPIRNLNDKEALSKYIESFYTLRK 460
>AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 |
chr4:17744085-17746426 FORWARD LENGTH=525
Length = 525
Score = 528 bits (1359), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/374 (70%), Positives = 310/374 (82%), Gaps = 2/374 (0%)
Query: 55 WAFNFDYHLPIPPSVLTTTIAFRRRNTTVKCSGGAYDVIIVGAGVTGSALAHTLAKDGRR 114
+AF Y L + ++ R TVK SG D+IIVGAGV G+ALAHTL K+GRR
Sbjct: 21 FAFLLLYVLRRRSKTIHGSVNVRNGTLTVK-SGTDVDIIIVGAGVAGAALAHTLGKEGRR 79
Query: 115 VHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCVEQIDAQRVLGYVLFKDGESTNLPY 174
VHVIERDL EPDRIVGELLQPGGYLKLIELGL+DCV+ IDAQRVLGY LFKDG+ T L Y
Sbjct: 80 VHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVKDIDAQRVLGYALFKDGKHTKLSY 139
Query: 175 PLQKFHADVTGKSFHNGRFIQRLREKAAALPNVQMEQGIATSLLEDDNKTIIGVHYKTKD 234
PL +F +DV G+SFHNGRF+QR+REKA+ LPNV+MEQG TSL+E+ N I GV YKTKD
Sbjct: 140 PLDQFDSDVAGRSFHNGRFVQRMREKASLLPNVRMEQGTVTSLVEE-NGIIKGVQYKTKD 198
Query: 235 RQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVPSCFVGLILENCQLPFQNYGHVILADPS 294
QE K++APLTIVCDGCFSNLR SLC PKVEVPS FVGL+LENC+LPF N+GHV+L DPS
Sbjct: 199 GQELKSFAPLTIVCDGCFSNLRRSLCKPKVEVPSNFVGLVLENCELPFPNHGHVVLGDPS 258
Query: 295 PILFYPISSTEIRCLVDIPGHKVHPISNGEMADYLKTMVTPQIPPELHDAFVSAINRGNI 354
PILFYPISS+E+RCLVD+PG K+ +++GEMA +LKTMV PQ+PP++ DAF+SA+ +GNI
Sbjct: 259 PILFYPISSSEVRCLVDVPGSKLPSVASGEMAHHLKTMVAPQVPPQIRDAFISAVEKGNI 318
Query: 355 RTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLQDLLKPLCDLNDAA 414
RTMPN SMPADP TPGALL+GDAFNMRHPLTGGGMTVALSDIV+L+DLL PL DL +
Sbjct: 319 RTMPNRSMPADPIHTPGALLLGDAFNMRHPLTGGGMTVALSDIVILRDLLNPLVDLTNKE 378
Query: 415 SLCRYLESFYTLRK 428
SL +Y+ESFYTLRK
Sbjct: 379 SLSKYIESFYTLRK 392
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 25/32 (78%)
Query: 426 LRKCALGIIFPIIKAEGVRQTFFPGTLPAFYR 457
L A GIIFPIIKAEGVRQ FFP T+PA YR
Sbjct: 483 LISSASGIIFPIIKAEGVRQMFFPRTIPAIYR 514
>AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding
oxidoreductase family protein | chr5:8172594-8175395
REVERSE LENGTH=516
Length = 516
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 236/344 (68%), Gaps = 4/344 (1%)
Query: 88 GAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQ 147
GA DVIIVGAGV GSALA+ LAKDGRRVHVIERDLREP+RI+GE +QPGG L L +LGL+
Sbjct: 44 GATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLE 103
Query: 148 DCVEQIDAQRVLGYVLFKDGESTNLPYPL--QKFHADVTGKSFHNGRFIQRLREKAAALP 205
DC+E IDAQ+ G ++KDG+ +P+ F D + +SFHNGRF+QRLR+KA++LP
Sbjct: 104 DCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLP 163
Query: 206 NVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVE 265
NV++E+G SL+E+ I GV YK +E A APLT+VCDGC+SNLR SL E
Sbjct: 164 NVRLEEGTVKSLIEEKG-VIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSLNDNNAE 222
Query: 266 VPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEM 325
V S VG I +NCQL +I++ PS + Y ISST++RC+ ++ + + ISNGEM
Sbjct: 223 VLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLYQISSTDVRCVFEVLPNNIPSISNGEM 282
Query: 326 ADYLKTMVTPQIPPELHDAFVSAINRG-NIRTMPNGSMPADPRPTPGALLMGDAFNMRHP 384
A ++K + PQ+P +L F+ I+ G +I+ MP M A G +L+GDAFNMRHP
Sbjct: 283 ATFVKNTIAPQVPLKLRKIFLKGIDEGEHIKAMPTKKMTATLSEKKGVILLGDAFNMRHP 342
Query: 385 LTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
GM V LSDI++L+ LL+PL +L +A + + ++SFY +RK
Sbjct: 343 AIASGMMVLLSDILILRRLLQPLSNLGNAQKISQVIKSFYDIRK 386
>AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase
family protein | chr5:8172670-8175395 REVERSE LENGTH=490
Length = 490
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 236/344 (68%), Gaps = 4/344 (1%)
Query: 88 GAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQ 147
GA DVIIVGAGV GSALA+ LAKDGRRVHVIERDLREP+RI+GE +QPGG L L +LGL+
Sbjct: 44 GATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLE 103
Query: 148 DCVEQIDAQRVLGYVLFKDGESTNLPYPL--QKFHADVTGKSFHNGRFIQRLREKAAALP 205
DC+E IDAQ+ G ++KDG+ +P+ F D + +SFHNGRF+QRLR+KA++LP
Sbjct: 104 DCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLP 163
Query: 206 NVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVE 265
NV++E+G SL+E+ I GV YK +E A APLT+VCDGC+SNLR SL E
Sbjct: 164 NVRLEEGTVKSLIEEKG-VIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSLNDNNAE 222
Query: 266 VPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEM 325
V S VG I +NCQL +I++ PS + Y ISST++RC+ ++ + + ISNGEM
Sbjct: 223 VLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLYQISSTDVRCVFEVLPNNIPSISNGEM 282
Query: 326 ADYLKTMVTPQIPPELHDAFVSAINRG-NIRTMPNGSMPADPRPTPGALLMGDAFNMRHP 384
A ++K + PQ+P +L F+ I+ G +I+ MP M A G +L+GDAFNMRHP
Sbjct: 283 ATFVKNTIAPQVPLKLRKIFLKGIDEGEHIKAMPTKKMTATLSEKKGVILLGDAFNMRHP 342
Query: 385 LTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
GM V LSDI++L+ LL+PL +L +A + + ++SFY +RK
Sbjct: 343 AIASGMMVLLSDILILRRLLQPLSNLGNAQKISQVIKSFYDIRK 386
>AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 |
chr5:8183291-8186601 REVERSE LENGTH=517
Length = 517
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 247/378 (65%), Gaps = 12/378 (3%)
Query: 55 WAFNFDYHLPIPPSVLTTTIAFRRRNTTVKCSGGAYDVIIVGAGVTGSALAHTLAKDGRR 114
W + ++ + L T+A +++ GA DVIIVGAGV GSALA+ LAKDGRR
Sbjct: 18 WTVFYLTNMKKKATDLADTVAEDQKD-------GAADVIIVGAGVGGSALAYALAKDGRR 70
Query: 115 VHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCVEQIDAQRVLGYVLFKDGESTNLPY 174
VHVIERD+REP+R++GE +QPGG L L +LGLQDC+E IDAQ+ G ++KDG+ + P+
Sbjct: 71 VHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPF 130
Query: 175 PL--QKFHADVTGKSFHNGRFIQRLREKAAALPNVQMEQGIATSLLEDDNKTIIGVHYKT 232
P+ F + + +SFHNGRF+Q+LR KA +L NV++E+G SLLE+ + GV YK
Sbjct: 131 PVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKG-VVKGVTYKN 189
Query: 233 KDRQEFKAYAPLTIVCDGCFSNLRHSLCHP-KVEVPSCFVGLILENCQLPFQNYGHVILA 291
K+ +E A APLT+VCDGC+SNLR SL E+ S VG I +NC+L H+IL+
Sbjct: 190 KEGEETTALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILS 249
Query: 292 DPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMADYLKTMVTPQIPPELHDAFVSAINR 351
PS + Y ISST++RC ++ I+NGEM+ ++K + PQ+PP+L F+ I+
Sbjct: 250 KPSFTMVYQISSTDVRCGFEVLPENFPSIANGEMSTFMKNTIVPQVPPKLRKIFLKGIDE 309
Query: 352 G-NIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLQDLLKPLCDL 410
G +I+ +P M + G +++GDAFNMRHP+ GM V LSDI++L+ LL+PL +L
Sbjct: 310 GAHIKVVPAKRMTSTLSKKKGVIVLGDAFNMRHPVVASGMMVLLSDILILRRLLQPLSNL 369
Query: 411 NDAASLCRYLESFYTLRK 428
DA + + SFY +RK
Sbjct: 370 GDANKVSEVINSFYDIRK 387
>AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 |
chr5:8164547-8167669 REVERSE LENGTH=516
Length = 516
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 227/346 (65%), Gaps = 6/346 (1%)
Query: 88 GAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQ 147
GA DVIIVGAGV G++LA+ LAKDGRRVHVIERDL+EP R +GEL+Q GG L +LGL+
Sbjct: 42 GATDVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLE 101
Query: 148 DCVEQIDAQRVLGYVLFKDGESTNLPYPLQK-FHADVTGKSFHNGRFIQRLREKAAALPN 206
DC+E IDAQ ++KDG+ LP+P K F + G+ NGR +QRLR+KAA+L N
Sbjct: 102 DCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSN 161
Query: 207 VQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEV 266
VQ+E+G SL+E++ + GV YK +E A+APLT+VCDGC+SNLR SL EV
Sbjct: 162 VQLEEGTVKSLIEEEG-VVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEV 220
Query: 267 PSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMA 326
S VG + +N +L + H+I + P + Y I+S E+RC+ ++P + ISNGEM+
Sbjct: 221 LSYMVGYVTKNSRLEDPHSLHLIFSKPLVCVIYQITSDEVRCVAEVPADSIPSISNGEMS 280
Query: 327 DYLKTMVTPQIPP--ELHDAFVSAINRG--NIRTMPNGSMPADPRPTPGALLMGDAFNMR 382
+LK + PQIP L + F+ I G I++ SM + G +++GDAFNMR
Sbjct: 281 TFLKKSMAPQIPETGNLREIFLKGIEEGLPEIKSTATKSMSSRLCDKRGVIVLGDAFNMR 340
Query: 383 HPLTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
HP+ GM VALSDI +L++LLKPL +L++ + ++SFY +RK
Sbjct: 341 HPIIASGMMVALSDICILRNLLKPLPNLSNTKKVSDLVKSFYIIRK 386
>AT5G24155.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase family
protein | chr5:8180118-8181016 REVERSE LENGTH=121
Length = 121
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 89 AYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQ 147
A DVIIVGAGV GSALA++LAKDGRRV IERD+REP+R++GE +QPGG L L +LGL+
Sbjct: 47 AADVIIVGAGVGGSALAYSLAKDGRRVLAIERDMREPERMMGEFMQPGGRLMLSKLGLE 105