Miyakogusa Predicted Gene

Lj0g3v0267059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0267059.1 Non Chatacterized Hit- tr|I1LAZ0|I1LAZ0_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,69.8,0,MADSDOMAIN,Transcription factor, MADS-box;
SEQUENCE-SPECIFIC DNA BINDING / TRANSCRIPTION
FACTOR,NULL,gene.g20731.t1.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48670.1 | Symbols: FEM111, AGL80 | AGAMOUS-like 80 | chr5:19...    86   1e-17
AT5G26630.1 | Symbols:  | MADS-box transcription factor family p...    84   6e-17
AT3G05860.2 | Symbols:  | MADS-box transcription factor family p...    71   2e-13
AT3G05860.3 | Symbols:  | MADS-box transcription factor family p...    71   3e-13
AT3G05860.1 | Symbols:  | MADS-box transcription factor family p...    71   3e-13
AT1G65330.1 | Symbols: PHE1, AGL37 | MADS-box transcription fact...    69   1e-12
AT1G65300.1 | Symbols: PHE2, AGL38 | AGAMOUS-like 38 | chr1:2425...    69   1e-12
AT5G27810.1 | Symbols:  | MADS-box transcription factor family p...    65   3e-11
AT5G26650.1 | Symbols: AGL36 | AGAMOUS-like 36 | chr5:9343785-93...    61   2e-10
AT5G27960.1 | Symbols: AGL90 | AGAMOUS-like 90 | chr5:9991685-99...    59   2e-09
AT2G28700.1 | Symbols: AGL46 | AGAMOUS-like 46 | chr2:12317384-1...    56   1e-08
AT1G22590.2 | Symbols: AGL87 | AGAMOUS-like 87 | chr1:7983511-79...    54   4e-08
AT5G06500.1 | Symbols: AGL96 | AGAMOUS-like 96 | chr5:1982444-19...    54   5e-08
AT2G40210.1 | Symbols: AGL48 | AGAMOUS-like 48 | chr2:16793213-1...    54   5e-08
AT1G31630.1 | Symbols: AGL86 | AGAMOUS-like 86 | chr1:11318528-1...    50   8e-07
AT1G31640.1 | Symbols: AGL92 | AGAMOUS-like 92 | chr1:11322692-1...    49   2e-06

>AT5G48670.1 | Symbols: FEM111, AGL80 | AGAMOUS-like 80 |
          chr5:19738825-19739790 REVERSE LENGTH=321
          Length = 321

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 1/99 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          MTRKKVKLAYIS+D                   EL+ LCGI ACAII +P+DT  EVWP+
Sbjct: 1  MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61 PEVAKQLIDRYQNASVIDESKN-VNQESFIMQRIAKAKD 98
              ++++  ++    +D+ K  V+QE F+ QRIAKA +
Sbjct: 61 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATE 99


>AT5G26630.1 | Symbols:  | MADS-box transcription factor family
           protein | chr5:9350815-9351471 FORWARD LENGTH=218
          Length = 218

 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 1   MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
           MTR+KVK+ +I ++                 A EL ILCG+P  A++++P++   EVWP+
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PEVAKQLIDRYQNASVIDESKN-VNQESFIMQRIAKAKDH 99
            E A Q++ +++  SV+D++K  VNQE+F+ QRI KA + 
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATES 100


>AT3G05860.2 | Symbols:  | MADS-box transcription factor family
          protein | chr3:1751655-1752355 REVERSE LENGTH=207
          Length = 207

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          MTRKK+ L+YI+++                   EL++LCGI ACA+I +PF++  EVWP+
Sbjct: 1  MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61 PEVAKQLIDRYQNASVID-ESKNVNQESFIMQRIAKA 96
              K +++ ++  + ++ E K V+ E FI Q I+K 
Sbjct: 61 NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKT 97


>AT3G05860.3 | Symbols:  | MADS-box transcription factor family
          protein | chr3:1751406-1752355 REVERSE LENGTH=249
          Length = 249

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          MTRKK+ L+YI+++                   EL++LCGI ACA+I +PF++  EVWP+
Sbjct: 1  MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61 PEVAKQLIDRYQNASVID-ESKNVNQESFIMQRIAKA 96
              K +++ ++  + ++ E K V+ E FI Q I+K 
Sbjct: 61 NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKT 97


>AT3G05860.1 | Symbols:  | MADS-box transcription factor family
          protein | chr3:1751406-1752355 REVERSE LENGTH=260
          Length = 260

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          MTRKK+ L+YI+++                   EL++LCGI ACA+I +PF++  EVWP+
Sbjct: 1  MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61 PEVAKQLIDRYQNASVID-ESKNVNQESFIMQRIAKA 96
              K +++ ++  + ++ E K V+ E FI Q I+K 
Sbjct: 61 NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKT 97


>AT1G65330.1 | Symbols: PHE1, AGL37 | MADS-box transcription
          factor family protein | chr1:24266481-24267320 REVERSE
          LENGTH=279
          Length = 279

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 3  RKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPE 62
          R K+KL++I +D                  +EL  LCG+ ACA+I +P+++  E WP+ E
Sbjct: 2  RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63 VAKQLIDRYQNASVIDESKN-VNQESFIMQRIAK 95
            ++++ ++   SV+D +K  V+QE+F+ QRIAK
Sbjct: 62 GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAK 95


>AT1G65300.1 | Symbols: PHE2, AGL38 | AGAMOUS-like 38 |
          chr1:24254929-24255765 FORWARD LENGTH=278
          Length = 278

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 3  RKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPE 62
          ++K+KL+ I +                   +EL  LCG+ ACA++ +PF++  E WP+ E
Sbjct: 2  KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63 VAKQLIDRYQNASVIDESKN-VNQESFIMQRIAKAKDH 99
            + ++ ++   SV+D +K  V+QE+FI QRIAK K+ 
Sbjct: 62 GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQ 99


>AT5G27810.1 | Symbols:  | MADS-box transcription factor family
          protein | chr5:9855827-9856186 FORWARD LENGTH=119
          Length = 119

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)

Query: 34 ELTILCGIPACAIISNPFDTQAEVWPNPEVAKQLIDRYQNASVIDESKN-VNQESFIMQR 92
          EL+ LCGI +CAII +P+DT  EVWP+    ++++  ++    +D+ K  V+QE F+ QR
Sbjct: 6  ELSTLCGITSCAIIYSPYDTSHEVWPSNSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQR 65

Query: 93 IAK 95
          IAK
Sbjct: 66 IAK 68


>AT5G26650.1 | Symbols: AGL36 | AGAMOUS-like 36 |
          chr5:9343785-9344885 FORWARD LENGTH=366
          Length = 366

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 4  KKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPEV 63
          KKVKL+ I+++                   EL+ LCG+ ACA+I +PF    E WP+ E 
Sbjct: 2  KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64 AKQLIDRYQNASVIDESKN-VNQESFIMQRIAKAKD 98
          AK++  R+        +K  ++QE+++M+RI KAK+
Sbjct: 62 AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKE 97


>AT5G27960.1 | Symbols: AGL90 | AGAMOUS-like 90 |
          chr5:9991685-9992770 REVERSE LENGTH=320
          Length = 320

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 4  KKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPEV 63
          KKVKL+ I+++                   EL+ LCG+ ACA+I +PF    E WP+ E 
Sbjct: 2  KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64 AKQLIDRY-QNASVIDESKNVNQESFIMQRIAKAKD 98
          AK++  ++ +        K ++QE+ +M+RI KAK+
Sbjct: 62 AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKE 97


>AT2G28700.1 | Symbols: AGL46 | AGAMOUS-like 46 |
          chr2:12317384-12318724 REVERSE LENGTH=329
          Length = 329

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          M RKK+ L YI +D                  ++L +LC + ACA++ NPF++  +VWP+
Sbjct: 1  MARKKLNLTYIFNDRMRKRSFKQRREGFLKKLNDLKVLCDVNACAVVYNPFNSNPDVWPS 60

Query: 61 PEVAKQLIDRYQNASVIDES----KNVNQESFIMQRIAKAK 97
                +I +++   ++ E+    K+VN E F+   I+K +
Sbjct: 61 KSEVNNIIKKFE---MLPETQKKVKSVNHEEFLNLYISKVE 98


>AT1G22590.2 | Symbols: AGL87 | AGAMOUS-like 87 |
          chr1:7983511-7984002 FORWARD LENGTH=163
          Length = 163

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          M R+KV    ISD+                   ELT+LCG+PACAII + +    E+WPN
Sbjct: 1  MGRRKVTHQLISDNATRRVTFRKRKDGLLKKIYELTVLCGLPACAIIYSEYKDGPELWPN 60

Query: 61 PEVAKQLIDRYQNASVIDESKNVNQESFIMQRI 93
              + +++R     V  ++K +  +  +M ++
Sbjct: 61 LNEVRSILNRLSELPVEKQTKYMMDQKDLMNKM 93


>AT5G06500.1 | Symbols: AGL96 | AGAMOUS-like 96 |
          chr5:1982444-1983172 FORWARD LENGTH=242
          Length = 242

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          M RKKV+ A+I DD                  +EL+ILC + A  ++ N  + Q   WP+
Sbjct: 1  MARKKVRAAWIRDDRMRRASLKRRLTGLIKKVNELSILCDMRASVVVFNREEEQLTAWPS 60

Query: 61 PEVAKQLIDRYQNASVIDES-KNVNQESFIMQRIAK 95
          PE A  LID + + +  + + K V+ ES++   I K
Sbjct: 61 PEAANSLIDNFYSLTDHERTMKAVDPESYVQTVIEK 96


>AT2G40210.1 | Symbols: AGL48 | AGAMOUS-like 48 |
          chr2:16793213-16794328 REVERSE LENGTH=371
          Length = 371

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 1  MTRKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPN 60
          MTRKKVKL +I +D                   ELTILC + A  II +P      VWP+
Sbjct: 1  MTRKKVKLVWIENDKSRATSLQKMRVGLLKKVKELTILCAVRAIVIIFSPDKVGPLVWPS 60

Query: 61 PEVAKQLIDR-YQNASVIDESKNVNQESFIMQRIAKAKD 98
          P+    L+D  +     + + K  N ES++ ++  K ++
Sbjct: 61 PQATHGLLDEFFALPKSVQKKKESNVESYLKEKTHKFQE 99


>AT1G31630.1 | Symbols: AGL86 | AGAMOUS-like 86 |
          chr1:11318528-11319547 REVERSE LENGTH=339
          Length = 339

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 3  RKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPE 62
          R K+KL+ I++                    ELT LCG+ ACA+IS+P++    VWP+ E
Sbjct: 2  RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYENPV-VWPSTE 60

Query: 63 VAKQLIDRYQNASVIDESK-NVNQESFIMQRIAK 95
            ++ +  +      ++SK  ++ E+++  +I K
Sbjct: 61 GVQEAVSMFMERPATEQSKLMMSHETYLQDKITK 94


>AT1G31640.1 | Symbols: AGL92 | AGAMOUS-like 92 |
          chr1:11322692-11324176 REVERSE LENGTH=464
          Length = 464

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)

Query: 3  RKKVKLAYISDDXXXXXXXXXXXXXXXXXASELTILCGIPACAIISNPFDTQAEVWPNPE 62
          R K KL  I D                    ELT LC I ACA+I +PF+    VWP+ E
Sbjct: 2  RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPT-VWPSTE 60

Query: 63 VAKQLIDRYQNASVIDESKN-VNQESFIMQRIAKAKD 98
            +++I  +      + SK  ++ E+F+  +I K ++
Sbjct: 61 GVQEVISEFMEKPATERSKTMMSHETFLRDQITKEQN 97