Miyakogusa Predicted Gene

Lj0g3v0266889.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266889.1 Non Chatacterized Hit- tr|D8T1H0|D8T1H0_SELML
Putative uncharacterized protein EMBL1692-2
OS=Selagin,30.89,0.00000000000007,PORR,Plant organelle RNA recognition
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NU,CUFF.17608.1
         (519 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-termina...   512   e-145
AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal hyd...   211   8e-55
AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   166   3e-41
AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   148   1e-35
AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   148   1e-35
AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   147   2e-35
AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrol...   135   8e-32
AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   132   6e-31
AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   132   6e-31
AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   118   8e-27
AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   117   1e-26
AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   116   3e-26
AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   114   2e-25
AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   107   2e-23
AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   106   4e-23
AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   103   3e-22
AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   102   9e-22
AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   100   2e-21

>AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr4:451444-453030 REVERSE
           LENGTH=528
          Length = 528

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/407 (64%), Positives = 310/407 (76%), Gaps = 10/407 (2%)

Query: 19  PFFISNRLPFLQRPKPSVKLRCSLQN-----SQFWGRNLSLVSSQ---RSVCNPPLRIGP 70
           P F+S   PF ++ K SVK    +       SQF G  L L +      +     + + P
Sbjct: 12  PLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEP 71

Query: 71  IRAAVKRRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRR 130
           +RAAVKRRKE+ FD+V+QRDKKLK VL +RKILVSQPDR+MSL+ LGKY+R+LGL ++RR
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRR 131

Query: 131 LIALLRKFPAVFEIMEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXX 190
            IALLRK+P VFEI+EEG +SL+FKMT EA+RLYL+E+R+RNE+ED              
Sbjct: 132 FIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSI 191

Query: 191 EKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERGPALELTHWDPXXXXXXXX 250
           +KRILLEKI+HL  DLGLP +FR+TIC  YPQYF+VV T RGPALELTHWDP        
Sbjct: 192 DKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAE 251

Query: 251 XXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFSM 310
                NR RE EE+NLIIDR PKFNRVKLP+GLNLSK E R+I QFRD+ YISPY DFS 
Sbjct: 252 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 311

Query: 311 LTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVS 370
           L SGT EKEKHACGV+HE+LSLT EKRTLVDH THFREEFRFSQQLRGMLIRHPD+FYVS
Sbjct: 312 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 371

Query: 371 LKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVNVPRFPK--GP 415
           LKG+RDSVFLRE YRNS+L++KD L L+KEK+R+LV+VPRFP+  GP
Sbjct: 372 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGP 418


>AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr5:25277828-25279312
           FORWARD LENGTH=494
          Length = 494

 Score =  211 bits (538), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 192/338 (56%), Gaps = 24/338 (7%)

Query: 83  FDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRKFPAVF 142
            D  + +  +++FV ++  +L+S+P   + ++ L K +  L ++    +++++R++P +F
Sbjct: 65  LDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIF 124

Query: 143 EIME-----------EGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXE 191
           E+             + +  L  ++T  A  L ++EL +++E+ D               
Sbjct: 125 ELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSH 184

Query: 192 KRILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERGPALELTHWDPXXXXXXXXX 251
           +R+LL K+ H+  D G P +FR  +C+ YP  FK V T  G ALEL   DP         
Sbjct: 185 RRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA------ 238

Query: 252 XXXXNRIRELE-EQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFS- 309
               N++   E ++ LI+DR  KF R+ L +GLNL +     +++FR+ P + PY   S 
Sbjct: 239 ----NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSD 294

Query: 310 MLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYV 369
            L S + E EK AC VV E+L LT+EKRTL+DH THFR+EF    +LR +++RHP++FYV
Sbjct: 295 YLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYV 354

Query: 370 SLKGDRDSVFLREGYR-NSQLMEKDRLLLIKEKLRSLV 406
           S+KG RDSVFL E Y  N  L++KD  L+I+E+L  L+
Sbjct: 355 SIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLI 392


>AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:7262071-7263420 FORWARD LENGTH=449
          Length = 449

 Score =  166 bits (421), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 166/316 (52%), Gaps = 21/316 (6%)

Query: 96  VLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRKFPAVFEIMEEGVFSLKFK 155
           V+ + ++L  + D +M+++   +Y+R++ L +  ++   +RK P +FE+ ++    L   
Sbjct: 74  VIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKISDFIRKSPKLFELYKDQRGVLWCG 133

Query: 156 MTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRILLEKIAHLGADLGLPQDFRET 215
           +T   + L  E  ++  E  D              +K++ L+KI H   D GLP DFR  
Sbjct: 134 LTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRIN 193

Query: 216 ICHSYPQYFKVVATERGPA-LELTHWDPXXXXXXXXXXXXXNRIRELEEQNLII----DR 270
             +++PQ+FKVV    G   LEL  W+P               I ELE++ L I    + 
Sbjct: 194 WVYNFPQHFKVVKLGDGEEYLELVSWNPAWA------------ITELEKKTLGITEDCEH 241

Query: 271 TPKFNRVKLPKGLNLSKGEMRR----IMQFRDLPYISPYADFSMLTSGTREKEKHACGVV 326
            P    +  P     S  +M R    I  F+   Y+SPYAD   L +G++E +K A  V+
Sbjct: 242 KPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVM 301

Query: 327 HEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREGYRN 386
           HE+LS TLEKR + DH THFR EF   Q+L  + ++H  +FYVS +G R SVFL EGY  
Sbjct: 302 HELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEG 361

Query: 387 SQLMEKDRLLLIKEKL 402
            +L+EK  L+L KEKL
Sbjct: 362 PELIEKCPLILWKEKL 377


>AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:19470461-19471729 FORWARD
           LENGTH=422
          Length = 422

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 17/346 (4%)

Query: 67  RIGPIRAAVKRRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLD 126
           R G +   +K  K+   D V+ R+K L+ V  +  ++ + PD  + + +L  ++ +LGL 
Sbjct: 29  RCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLP 88

Query: 127 RKRRLIALLRKFPAVF----EIMEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXX 182
           ++ +L A +R++P +F         G     F +T E   LY EE+ V    E       
Sbjct: 89  QELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRL 148

Query: 183 XXXXXXXXEKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERG-PALELTHWD 241
                   E+ + L  I HL  DLGLP D+R+++   +P  F +V        L+L HWD
Sbjct: 149 CKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWD 208

Query: 242 PXXXXXXXXXXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPY 301
                          ++RE    ++  D    F  VK  +G  L +  +  + +++ LPY
Sbjct: 209 EHLAVSQM-------QLRE----DVGNDERMAFP-VKFTRGFGLKRKSIEWLQEWQRLPY 256

Query: 302 ISPYADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLI 361
            SPY D S L   T   EK   GV HE+L LT+ K+T   + ++ R+ F   Q+   +  
Sbjct: 257 TSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFE 316

Query: 362 RHPDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVN 407
           RHP +FY+S+K D  +V LRE Y    L+EK  L+ ++EK  +++N
Sbjct: 317 RHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMN 362


>AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:23313617-23314831 FORWARD
           LENGTH=404
          Length = 404

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 18/337 (5%)

Query: 78  RKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRK 137
           +K+   D  I++DK+ K   RV K ++++P +V+ L+ L K +  L L  K +  + +  
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEM 96

Query: 138 FPAVFEIMEEGV----FSLKF-KMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEK 192
            P++FEI  + +      ++F + TP       EE R+ +E E               +K
Sbjct: 97  NPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDK 156

Query: 193 RILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVAT-ERGPA-LELTHWDPXXXXXXXX 250
            I  +K+ H+  D G P DF   +   YP YF++    E G + LEL  W+P        
Sbjct: 157 VISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIE 216

Query: 251 XXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQ-FRDLPYISPYADFS 309
                    E E     +   P +N VKLP G  L K EMR   + + +  YISPY D S
Sbjct: 217 LRA------EDETLKTGVRIRPNYN-VKLPSGFFLRK-EMREWTRDWLEQDYISPYEDVS 268

Query: 310 MLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYV 369
            L   ++E EK   GVVHE+LSL+L KR  V     F +EFRFS     +  RH  +FY+
Sbjct: 269 HLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYL 328

Query: 370 SLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
           SLKG   +  LRE Y++ +L+++D LL IK+K   L+
Sbjct: 329 SLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365


>AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:5730986-5732173 REVERSE LENGTH=395
          Length = 395

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 20/331 (6%)

Query: 84  DNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRKFPAVFE 143
           ++++ RD   +F++R ++ +  QP+R++ L + GK  RELG  R R++   + K P +F+
Sbjct: 72  ESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQ 131

Query: 144 IMEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRILLEKIAHLG 203
                   +    T   + L  EE  +   ME               +KRILL KI H  
Sbjct: 132 TYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTR 191

Query: 204 ADLGLPQDFRETICHSYPQYFKVVATERGP-ALELTHWDPXXXXXXXXXXXXXNRIRELE 262
              G+P+DFR+ +   YP YF+VV    G   LEL +WD                + ELE
Sbjct: 192 LLFGIPEDFRDRVA-KYPDYFRVVTGGDGNRVLELVNWDTNLA------------VSELE 238

Query: 263 EQNLIID----RTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFSMLTSGTREK 318
              +I +    R  KF  VK  K L L + + R++      P +SPY+D   L   + E 
Sbjct: 239 RLFMIDEDKAKRVFKFP-VKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEA 297

Query: 319 EKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSV 378
           EK+  G+VHE L+LTLEKR  + H   F++EF  ++Q   ML +    FY++      +V
Sbjct: 298 EKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTV 357

Query: 379 FLREGY-RNSQLMEKDRLLLIKEKLRSLVNV 408
           FL++ Y  N  L+ KD  ++  EKL    ++
Sbjct: 358 FLKDAYDENGVLVSKDPQVVFNEKLYKYADM 388


>AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:16111349-16112578 REVERSE
           LENGTH=409
          Length = 409

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 177/344 (51%), Gaps = 21/344 (6%)

Query: 77  RRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRL-IALL 135
           R ++  +DN ++ +KK++ V++   +++SQP+  +++  L    R LGL  K+    A L
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFL 105

Query: 136 RKFPAVFEIMEEGVFSLKF-KMTPEA-DRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKR 193
            KFP VFEI E  V  + + ++T +A D++  E   V +++ D                R
Sbjct: 106 LKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNT-GR 164

Query: 194 ILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATE--RGPALELTHWDPXXXXXXXXX 251
           I LE +     + GLP+DF  ++   +PQ+F+++  E  R   +E+   DP         
Sbjct: 165 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI-- 222

Query: 252 XXXXNRIRELEEQNLIID-RTPKFN-RVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFS 309
                R+RE+E +   ID    +F+  V  P G  + K     + +++ LPY SPY D S
Sbjct: 223 ----ERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDIS 278

Query: 310 MLTSGTREK----EKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPD 365
                + E     EK +   +HE+LSLT+EK+  ++   HFR      ++L+  L++H  
Sbjct: 279 GYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQG 338

Query: 366 MFYVSLKGDR---DSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
           +FY+S +G+     +VFLREGY+  +L+E + + L + +L  LV
Sbjct: 339 IFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382


>AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  132 bits (332), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 22/332 (6%)

Query: 78  RKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRK 137
           +K+   ++ + R+K+     R++ I++  P++V S+K L K  + L L  K   +  L+K
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKA--LNWLKK 86

Query: 138 FPAVFEIMEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRILLE 197
           +P  F +  E       ++T     L  EE  V++  E                +R+ + 
Sbjct: 87  YPCCFHVYLEND-EYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVV 145

Query: 198 KIAHLGADLGLPQDFRETICHSYPQYFKVV---ATERGPALELTHWDPXXXXXXXXXXXX 254
           K+       G P D+   I   Y   F++V     +    +EL  W P            
Sbjct: 146 KLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELA--------- 196

Query: 255 XNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFSMLTSG 314
              +  +E         P F+   LP           R M+F   PYISPY D   L  G
Sbjct: 197 ---VSAVEAAAKKCGSEPSFS-CSLPSTWT---KPWERFMEFNAFPYISPYEDHGDLVEG 249

Query: 315 TREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGD 374
           ++E EK + G+VHE+LSLTL K+  +   +HF+ EF   ++L GML++HP +FYV  K  
Sbjct: 250 SKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQ 309

Query: 375 RDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
             +V LREGY  S+L+ KD L+++K+K   L+
Sbjct: 310 VHTVILREGYNGSELIHKDPLVVVKDKFGELM 341


>AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  132 bits (332), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 22/332 (6%)

Query: 78  RKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRK 137
           +K+   ++ + R+K+     R++ I++  P++V S+K L K  + L L  K   +  L+K
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKA--LNWLKK 86

Query: 138 FPAVFEIMEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRILLE 197
           +P  F +  E       ++T     L  EE  V++  E                +R+ + 
Sbjct: 87  YPCCFHVYLEND-EYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVV 145

Query: 198 KIAHLGADLGLPQDFRETICHSYPQYFKVV---ATERGPALELTHWDPXXXXXXXXXXXX 254
           K+       G P D+   I   Y   F++V     +    +EL  W P            
Sbjct: 146 KLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELA--------- 196

Query: 255 XNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFSMLTSG 314
              +  +E         P F+   LP           R M+F   PYISPY D   L  G
Sbjct: 197 ---VSAVEAAAKKCGSEPSFS-CSLPSTWT---KPWERFMEFNAFPYISPYEDHGDLVEG 249

Query: 315 TREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGD 374
           ++E EK + G+VHE+LSLTL K+  +   +HF+ EF   ++L GML++HP +FYV  K  
Sbjct: 250 SKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQ 309

Query: 375 RDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
             +V LREGY  S+L+ KD L+++K+K   L+
Sbjct: 310 VHTVILREGYNGSELIHKDPLVVVKDKFGELM 341


>AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:29767314-29768555 REVERSE
           LENGTH=413
          Length = 413

 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 22/338 (6%)

Query: 83  FDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRKFPAVF 142
            D  I  +KK   +L+++ I+ +Q    + L++L K+   +G   K  L+A + K+P +F
Sbjct: 68  LDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEKH---VGFVHKWNLMAAIEKYPTIF 124

Query: 143 EI---MEEGVFSLKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRILLEKI 199
            +    +E  F +   +T +A ++  EE      ME               + R+ LEK+
Sbjct: 125 YVGGGHKEPPFVM---LTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVPLEKV 181

Query: 200 AHLGADLGLPQDFRETICHSYPQYFKVVATERGPALELTHWDPXXXXXX----------X 249
             + + +GLPQDF+ T+   Y ++F +        L L +WD                  
Sbjct: 182 EFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLENWDSSLAITAREDRLSREGFS 241

Query: 250 XXXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFS 309
                  R+R  ++ N +     K   +  P G   +   +    +++ + + SPY +  
Sbjct: 242 ESVGDRKRVRITKDGNFLGRNAFK---ISFPPGFRPNASYLEEFEKWQKMEFPSPYLNAR 298

Query: 310 MLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYV 369
              +   +  K    V+HE+LSLT+EKR        F  E+    +L   LI+H  +FY+
Sbjct: 299 RFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGIFYI 358

Query: 370 SLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVN 407
           + KG R +VFL++ Y  S L+EK  LLL  ++  +L  
Sbjct: 359 TNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCG 396


>AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572345-18573664 FORWARD
           LENGTH=439
          Length = 439

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 13/333 (3%)

Query: 77  RRKEMPFDNVIQRDKKLKFVLRVRKILVSQP-DRVMSLKELGKYKRELGLDRKRRLIALL 135
           R ++   D +I + +KL  +L + K++ S+     +SL+ + ++K  +GL+    + A +
Sbjct: 68  RTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVN--VGAFI 125

Query: 136 RKFPAVFEIMEEGVFS--LKFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKR 193
            K+P  FEI     FS  L  K+T +   L  EE  V  E E                  
Sbjct: 126 GKYPHAFEIFTHP-FSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGV 184

Query: 194 ILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERGPALELTHWDPXXXXXXXXXXX 253
           + +  +  +  +LGLP+DFR++I   Y   F++V  E    LEL   D            
Sbjct: 185 LRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE---TLELVDRDDESLCVAKVEEW 241

Query: 254 XXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPYADFSMLTS 313
              R  E  E+ L    T     + LP G  + KG    +  ++ +PY+ PY D   ++ 
Sbjct: 242 ---REVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY-DRKEISR 297

Query: 314 GTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 373
           G    EK    V+HE+LSLT+EK   V+   HFR++      +R ++++HP +FYVS KG
Sbjct: 298 GLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVSTKG 357

Query: 374 DRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
              ++FLRE Y    L+E + +  ++ K+  LV
Sbjct: 358 SSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLV 390


>AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:1963733-1964905 REVERSE LENGTH=390
          Length = 390

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 11/360 (3%)

Query: 60  SVCNPPLRIGPIRAAVKRRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDR---VMSLKEL 116
           S+ N        +    R ++  F+ ++ + K L  V+ ++ + ++ P      +S++ L
Sbjct: 17  SIINVRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFL 76

Query: 117 GKYKRELGLDRKRRLIALLRKFPAVFEIMEEGVFSLKF-KMTPEADRLYLEELRVRNEME 175
            +  ++L L+R     + LRK+P +F ++ + V +  F ++T  A  +  +E        
Sbjct: 77  SRLSQKLHLNRGA--ASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATL 134

Query: 176 DXXXXXXXXXXXXXXEKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERGPAL 235
                           K I L  +  +  +LGLP DF +++    P  FK+         
Sbjct: 135 SLVVDRLVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTH 194

Query: 236 ELTHWDPXXXXXXXXXXXXXNRIRELEEQNLIIDRTP-KFN-RVKLPKGLNLSKGEMRRI 293
            L                   R+ E  +++  +DRT  +F+ +   P G+ LSK    ++
Sbjct: 195 ILELVQEEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKV 254

Query: 294 MQFRDLPYISPYADF---SMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEF 350
            +++ LPY+ PY D        SG    EK A  + HE L+LT+EK   V+  +HFR+ F
Sbjct: 255 KEWQRLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCF 314

Query: 351 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVNVPR 410
                +R + + HP MFYVS KG R +VFLRE Y   +L++ + +   + KL  LV + R
Sbjct: 315 GIDLNIRDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374


>AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=418
          Length = 418

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 147/339 (43%), Gaps = 19/339 (5%)

Query: 75  VKRRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIAL 134
           +K  K    D+VI  +  LK    ++  +   P   ++ K +  +++ LGL     ++  
Sbjct: 33  LKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVP--VLRF 90

Query: 135 LRKFPAVFEIMEEGVFSL--KFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEK 192
           LR++P +F       ++    FK+T  A  L  +E  +    E                K
Sbjct: 91  LRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSK 150

Query: 193 RILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERG-PALELTHWDPXXXXXXXXX 251
            + L  +  L  DLGLP ++ +T+   YP +F  V    G P L+L  W           
Sbjct: 151 TVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEFAFSALQK 210

Query: 252 XXXXNRIRELEEQNLIIDRTPKFNR--------VKLPKGLNLSKGEMRRIMQFRDLPYIS 303
               N +   E       R  +F R        +  P+G    K     + +F+ LPYIS
Sbjct: 211 RNEDNDVSGEES------RYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYIS 264

Query: 304 PYADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRH 363
           PY D S +   +   EK A  V+HE+LSLT+ K+T  ++    R E     +   +  R+
Sbjct: 265 PYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRY 324

Query: 364 PDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKL 402
           P +FY+SLK    +V L+EGYR  +L++   L  +++K 
Sbjct: 325 PGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKF 363


>AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:27024875-27026287 REVERSE
           LENGTH=470
          Length = 470

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 35/343 (10%)

Query: 83  FDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRRLIALLRKFPAVF 142
            D+ ++R+K L+ +L ++ ++ S+P + + +  +   K  L +    R I  +R FP+VF
Sbjct: 37  LDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRV--PLRPIEFIRSFPSVF 94

Query: 143 EIMEEGVFSLK--FKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKRIL----- 195
           +    G   +     +TPE          + N   D                R+L     
Sbjct: 95  QEFLPGGIGIHPHISLTPE----------ILNHDADEQLVYGSETYKQGLADRLLKLLMI 144

Query: 196 -------LEKIAHLGADLGLPQDFRETICHSYPQYFKVVATE-RGPA--LELTHWDPXXX 245
                  LE +  L  DLGLP+D+ ET+   +P YF+V+ ++ RG +  LEL  W     
Sbjct: 145 NRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHA 204

Query: 246 XXXXXXXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRIMQFRDLPYISPY 305
                      R  E  + + I    P    +K   G  + K   + I  ++ LPYISPY
Sbjct: 205 VSVLEKKARTLRKGEYTKGSAIA--FP----MKFSNGFVVDKKMKKWIDDWQKLPYISPY 258

Query: 306 ADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPD 365
            +   L++ + E +K A  V+HEI++L + K+   D   H  E      + + +L  HP 
Sbjct: 259 ENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPG 318

Query: 366 MFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVNV 408
           +FY+S K    +V LR+GY+   L+E + L+  + +   L+N 
Sbjct: 319 IFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNT 361


>AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572473-18573664 FORWARD
           LENGTH=354
          Length = 354

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 12/300 (4%)

Query: 109 RVMSLKELGKYKRELGLDRKRRLIALLRKFPAVFEIMEEGVFS--LKFKMTPEADRLYLE 166
           R  + K + ++K  +GL+    + A + K+P  FEI     FS  L  K+T +   L  E
Sbjct: 16  RFSTNKLMSRWKNLVGLNVN--VGAFIGKYPHAFEIFTHP-FSKNLCCKITEKFKVLIDE 72

Query: 167 ELRVRNEMEDXXXXXXXXXXXXXXEKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKV 226
           E  V  E E                  + +  +  +  +LGLP+DFR++I   Y   F++
Sbjct: 73  EENVVRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRL 132

Query: 227 VATERGPALELTHWDPXXXXXXXXXXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLS 286
           V  E    LEL   D               R  E  E+ L    T     + LP G  + 
Sbjct: 133 VDLE---TLELVDRDDESLCVAKVEEW---REVEYREKWLSKFETNYAFPIHLPTGFKIE 186

Query: 287 KGEMRRIMQFRDLPYISPYADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHF 346
           KG    +  ++ +PY+ PY D   ++ G    EK    V+HE+LSLT+EK   V+   HF
Sbjct: 187 KGFREELKNWQRVPYVKPY-DRKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHF 245

Query: 347 REEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
           R++      +R ++++HP +FYVS KG   ++FLRE Y    L+E + +  ++ K+  LV
Sbjct: 246 RKDLGIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLV 305


>AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:16321794-16322957 FORWARD
           LENGTH=387
          Length = 387

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 29/348 (8%)

Query: 71  IRAAVKRRKEMPFDNV--IQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRK 128
           +   +K +++  FDN+  I R  +LK V+ ++  +V +P+R + +  + K  R+   D  
Sbjct: 25  VDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF--DVS 82

Query: 129 RRLIALLRKFPAVFEIMEEGVFSLK-FKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXX 187
            ++   LRKFP++FE      ++L  F++TPEA  L  +E  V     D           
Sbjct: 83  TKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLIL 142

Query: 188 XXXEKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATE---RGPALELTHWDPXX 244
              +  + L  +  +   LGLP D+ +    +    F+ V  E   +G A++    D   
Sbjct: 143 MSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGD--- 199

Query: 245 XXXXXXXXXXXNRIRELEEQNLIIDRTPKFNRVKLPKGLNLSKGEMRRI------MQFRD 298
                       ++  + ++N +  R  + +  ++   L  SKG   R+      M+F+ 
Sbjct: 200 ------------KVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQK 247

Query: 299 LPYISPYADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRG 358
           LPY+SPY D+S L   +   EK   G +HE+L L +E           ++ F   Q++  
Sbjct: 248 LPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHK 307

Query: 359 MLIRHPDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
              RHP +FY+S+K    +  LRE YR+   +E   +L +++K   L+
Sbjct: 308 AFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355


>AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:12602298-12603485 REVERSE
           LENGTH=395
          Length = 395

 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 161/354 (45%), Gaps = 33/354 (9%)

Query: 71  IRAAVKRRKEMPFDNVIQRDKKLKFVLRVRKILVSQPDRVMSLKELGKYKRELGLDRKRR 130
           + A VK   +   D  +QR+K LK V+ ++  +VS P + + L  L   K  + L     
Sbjct: 19  VNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHIT-- 76

Query: 131 LIALLRKFPAVFEIMEEG-VFSLKFKMTPEADRLYLEE--LRVRNEMEDXXXXXXXXXXX 187
             A  +K+P+VF   +      L  ++TP+A  L+ EE  + +     +           
Sbjct: 77  AAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKFLM 136

Query: 188 XXXEKRILLEKIAHLGADLGLPQDFRETICHSYPQYFKV------VATERGPALELTHWD 241
                 + L  +     DLGLP+D+  ++   YP+YF+V      +  E+  AL ++   
Sbjct: 137 LTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTIS--- 193

Query: 242 PXXXXXXXXXXXXXNR--IRELEEQNLIID--RTPKFNRVK----LPKGLNLSKGEMRRI 293
                         N   + E+E +   ID  R  K  R++     PKG  L K     +
Sbjct: 194 -----------SRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWV 242

Query: 294 MQFRDLPYISPYADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFS 353
            Q+++LPYISPY +   L S + + EK A  V+HE+L L + K+T  D+     E   F 
Sbjct: 243 EQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFG 302

Query: 354 QQLRGMLIRHPDMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLVN 407
            + +  L+ HP +FY+S K    +V LRE Y    L+EK  L+ I+ +   L++
Sbjct: 303 MRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMS 356


>AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=406
          Length = 406

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 17/282 (6%)

Query: 136 RKFPAVFEIMEEGVFSL--KFKMTPEADRLYLEELRVRNEMEDXXXXXXXXXXXXXXEKR 193
           +++P +F       ++    FK+T  A  L  +E  +    E                K 
Sbjct: 80  KRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKT 139

Query: 194 ILLEKIAHLGADLGLPQDFRETICHSYPQYFKVVATERG-PALELTHWDPXXXXXXXXXX 252
           + L  +  L  DLGLP ++ +T+   YP +F  V    G P L+L  W            
Sbjct: 140 VSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEFAFSALQKR 199

Query: 253 XXXNRIRELEEQNLIIDRTPKFNR--------VKLPKGLNLSKGEMRRIMQFRDLPYISP 304
              N +   E       R  +F R        +  P+G    K     + +F+ LPYISP
Sbjct: 200 NEDNDVSGEES------RYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISP 253

Query: 305 YADFSMLTSGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHP 364
           Y D S +   +   EK A  V+HE+LSLT+ K+T  ++    R E     +   +  R+P
Sbjct: 254 YDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYP 313

Query: 365 DMFYVSLKGDRDSVFLREGYRNSQLMEKDRLLLIKEKLRSLV 406
            +FY+SLK    +V L+EGYR  +L++   L  +++K   ++
Sbjct: 314 GIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVM 355