Miyakogusa Predicted Gene

Lj0g3v0266719.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266719.2 tr|Q06431|Q06431_BETPN BP8 protein OS=Betula
pendula GN=BP8 PE=4 SV=1,44.07,4e-18,seg,NULL; LEA_4,Late
embryogenesis abundant protein, LEA-3; coiled-coil,NULL; LATE
EMBRYOGENESIS ABU,CUFF.17593.2
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36640.1 | Symbols: ATECP63, ECP63 | embryonic cell protein 6...    70   2e-12
AT3G53040.1 | Symbols:  | late embryogenesis abundant protein, p...    61   1e-09

>AT2G36640.1 | Symbols: ATECP63, ECP63 | embryonic cell protein 63 |
           chr2:15357019-15358552 REVERSE LENGTH=448
          Length = 448

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 109/295 (36%), Gaps = 64/295 (21%)

Query: 36  DQQKRGVIGSVLQAVQNTYENAKGAVVGKKDNHPADIDANANRXXXXXXXXXXXXXXKG- 94
           +Q + GVIGSV +AVQ TYE+A+ AVVGK           A                K  
Sbjct: 48  EQDRPGVIGSVFRAVQGTYEHARDAVVGKTHEAAESTKEGAQIASEKAVGAKDATVEKAK 107

Query: 95  ----------------------EVRDISATKSYDTSSATTNKA-------GSKVGGESTD 125
                                 E +D +A K+ +T++ T +KA         K+G E  D
Sbjct: 108 ETADYTAEKVGEYKDYTVDKAKEAKDTTAEKAKETANYTADKAVEAKDKTAEKIG-EYKD 166

Query: 126 FAAQKAKETKDATVEKTXXXXXXXXXXXXXXXXXTAEKAKEGKDSAADAAKRAVGYLGDX 185
           +A  KA E KD T EK                  TAEK  E KD   D A  A  Y  + 
Sbjct: 167 YAVDKAVEAKDKTAEKAKETANYTADKAKEAKDKTAEKVGEYKDYTVDKAVEARDYTAEK 226

Query: 186 XXXXXXXXXXXXXXXXNKTVENTQAAKD-----------SATDACERAIGYMGDKKEETK 234
                           + TVE     KD           SA +  +RA+G++  K EE K
Sbjct: 227 AIEAKDKTAEKTGEYKDYTVEKATEGKDVTVSKLGELKDSAVETAKRAMGFLSGKTEEAK 286

Query: 235 QXXXXXXXXXXXXXXXXXXXXXHRTSEAMDTTKENLSGASEEARRKMEELKLQDK 289
                                  +  E  DT KEN+  A E  R+KMEE++L+ K
Sbjct: 287 ----------------------GKAVETKDTAKENMEKAGEVTRQKMEEMRLEGK 319


>AT3G53040.1 | Symbols:  | late embryogenesis abundant protein,
           putative / LEA protein, putative |
           chr3:19664797-19666405 REVERSE LENGTH=479
          Length = 479

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 80/206 (38%), Gaps = 34/206 (16%)

Query: 94  GEVRDISATKSYDTSSATTNKAGSKVGGESTDFAAQKAKETKDATVEKTXXXXXXXXXXX 153
           GE +D +A K+ +    T  K G     E  D+   KAKE KD T EK            
Sbjct: 176 GEYKDYTAEKAKEAKDTTAEKLG-----EYKDYTVDKAKEAKDKTAEKAKETAEYTSDKA 230

Query: 154 XXXXXXTAEKAKEGKDSAADAAKRAVGYLGDXXXXXXXXXXXXXXXXXNKTVENTQAA-- 211
                 TAEK  E KD  A+ AK       +                  K  E   A   
Sbjct: 231 RETKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVS 290

Query: 212 -----KDSATDACERAIGYMGDKKEETKQXXXXXXXXXXXXXXXXXXXXXHRTSEAMDTT 266
                KDSA D  +RA+G++  K EETKQ                      +  E  DT 
Sbjct: 291 KIGELKDSAVDTAKRAMGFLSGKTEETKQ----------------------KAVETKDTA 328

Query: 267 KENLSGASEEARRKMEELKLQDKSGD 292
           KE +  A EEARRKMEE++L+ K  D
Sbjct: 329 KEKMDEAGEEARRKMEEMRLEGKKLD 354



 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 84/200 (42%), Gaps = 24/200 (12%)

Query: 41  GVIGSVLQAVQNTYENAKGAVVGKKDNHPADIDANANRXXXXXXXXXXXXXXKGEVRDIS 100
           G+IGSV++AVQ T    K AV+GK  +        A+                GEVRD +
Sbjct: 53  GLIGSVMKAVQGT----KDAVIGKSHDTAESTREGAD---IASEKAAGMRDTTGEVRDST 105

Query: 101 ATKSYDTSSATTNKA------GSKVGGESTDFAAQKAKETKDATVEKTXXXXXXXXXXXX 154
           A K+ +T+  T +KA       +    E+ D+AA+KA+E KD T +KT            
Sbjct: 106 AQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKT-----------K 154

Query: 155 XXXXXTAEKAKEGKDSAADAAKRAVGYLGDXXXXXXXXXXXXXXXXXNKTVENTQAAKDS 214
                TAEKA+E KD  AD       Y  +                 + TV+  + AKD 
Sbjct: 155 ETAEYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDK 214

Query: 215 ATDACERAIGYMGDKKEETK 234
             +  +    Y  DK  ETK
Sbjct: 215 TAEKAKETAEYTSDKARETK 234