Miyakogusa Predicted Gene

Lj0g3v0266449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266449.1 tr|Q53LP8|Q53LP8_ORYSJ Seed protein B32E OS=Oryza
sativa subsp. japonica GN=LOC_Os11g09320 PE=4
SV=1,40.78,0.000000000000003,seg,NULL,CUFF.17594.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21380.1 | Symbols:  | Target of Myb protein 1 | chr1:7485806...    68   2e-12
AT1G76970.1 | Symbols:  | Target of Myb protein 1 | chr1:2892284...    67   4e-12

>AT1G21380.1 | Symbols:  | Target of Myb protein 1 |
           chr1:7485806-7488032 REVERSE LENGTH=506
          Length = 506

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 48/179 (26%)

Query: 2   VDYLSGDAYETEVSYDNSEPTPYAVPLHSDXXXXXXXXXXXXXXXXXXXMNTSTPGFSKQ 61
           +D+LSGD Y+ + +++N +P   +                           +S   +S  
Sbjct: 339 MDFLSGDVYKPQETFENVKPPSTS--------------------------QSSNHDYSA- 371

Query: 62  PIYDEPSPVNKS-------------SESLSPAPGDTQSPGILPPP-PARFNQRQNFFEEQ 107
           PI+DEP P +KS             +E L PAP +TQ P   PP   AR N+R  +F+  
Sbjct: 372 PIFDEPVPQSKSPEHALFTKPVYDQTEQLPPAPWETQEPRKYPPSMSARTNKRPEYFQHN 431

Query: 108 GMXXXXXXXXXXXXXLLGQTQNLSLNSST-------PTKQEKLEDALFKDLLDFAKSKT 159
                          LLGQ++NLSLN +        P K +K ED LFKDL+DFAK++T
Sbjct: 432 VPQHSSSASESSYDDLLGQSRNLSLNPTASAAPVTPPKKDDKPEDILFKDLMDFAKTRT 490


>AT1G76970.1 | Symbols:  | Target of Myb protein 1 |
           chr1:28922841-28924854 REVERSE LENGTH=446
          Length = 446

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 17/98 (17%)

Query: 63  IYDEPSPV-NKSSESLSPAPGDTQSPGILPPPPARFNQRQNFFEEQGMXXXXXXXXXXXX 121
           ++D+ SP  +KSSE +            LPPPP+R NQRQ FFE                
Sbjct: 355 VFDDASPQQSKSSEVIRN----------LPPPPSRHNQRQQFFEHHHSSSGSDSSYE--- 401

Query: 122 XLLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFAKSKT 159
              GQT+NLSL SS P K+EK ED LFKDL++FAK+++
Sbjct: 402 ---GQTRNLSLTSSEPQKEEKPEDLLFKDLVEFAKTRS 436