Miyakogusa Predicted Gene

Lj0g3v0266399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266399.1 gene.g20677.t1.1
         (557 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 | chr2...   196   3e-50
AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzym...   162   7e-40

>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 |
           chr2:14277785-14281482 REVERSE LENGTH=907
          Length = 907

 Score =  196 bits (499), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 125/179 (69%)

Query: 2   GRVTSVDVFADLENVRGEVLKNVNSEKLMKIRSTSEGDYVIKGPWLGQVQRVVDKVTVLF 61
           GRV ++D+F +LE+  G+++K V++++L K+RS S  DYVI GPW+G+V ++V++V+V  
Sbjct: 73  GRVINIDMFVNLESTHGKIMKEVDTKRLQKLRSISLSDYVINGPWVGRVDKIVERVSVTL 132

Query: 62  DDGVKCDIVASDREKVLPLTGNFLEDSQYPYYPGQRXXXXXXXXXXXXRWLCGTWRDNQD 121
           DDG   +++   ++K++ +  N LEDSQY YYPGQR             WLCGTWR  Q 
Sbjct: 133 DDGTNYEVLVDGQDKLVAIPPNLLEDSQYSYYPGQRVQVKLAHAPRSTTWLCGTWRGTQV 192

Query: 122 EGTVCAVDAGLVYVNWLASVIVDCNLDVNAPPCWQGSENLTVLSSFSHANWNLGDWCML 180
            GTVC V+AGLVYV+W+AS++++ + ++ AP   Q  E+LT+L   SHA+W LGDWC+L
Sbjct: 193 MGTVCTVEAGLVYVDWVASIVMEGDRNLTAPQALQNPESLTLLPCVSHASWQLGDWCIL 251



 Score =  158 bits (400), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 181/354 (51%), Gaps = 38/354 (10%)

Query: 198 KRFVLEKGASYDPLRPSSQRWGVVQGVDAKEHTVKVQWKTGSLSDPDNLSGNNMEETVSA 257
           ++FV+EK         +S++WGVV+ V+AKE TVKVQW      +        MEE VSA
Sbjct: 337 EQFVVEKETC------NSKKWGVVKAVNAKEQTVKVQWTIQVEKEATGCVDEVMEEIVSA 390

Query: 258 YELVEHPDYSCFYGDIMFKA-AQKQFGYQAAKEKEKSSNDLNADTSLKNE-NQMGYQDGF 315
           YEL+EHPD+   + D++ K   + +F             D NADT +  E   +  +  +
Sbjct: 391 YELLEHPDFGFCFSDVVVKLLPEGKF-------------DPNADTIVATEAKHLLTESDY 437

Query: 316 SDDGFLHCIGSVIGFKDGDVEVKWATGFTTKVEPYEVVRIDKHEGSTLNSSTYERNVEEL 375
           S   FL  IG V GFK+G V+VKWA G T+KV P E+ ++++ E S  ++ + E +V++L
Sbjct: 438 SGAYFLSSIGVVTGFKNGSVKVKWANGSTSKVAPCEIWKMERSEYSNSSTVSSEGSVQDL 497

Query: 376 TPEIIEHGSLPSDQKGKDSLNGDGSGENCEKYPGECSSFFLPGAAFEFFSSLKASIFQXX 435
           + +I +     S+ +    +     GE+C +   ECSSFFLP AA  F ++L +S+F   
Sbjct: 498 SQKISQSDEASSNHQETGLVKLYSVGESCNENIPECSSFFLPKAAIGFITNLASSLF--- 554

Query: 436 XXXXXXXXXAVYSVPTFEKENGSDFHDNKDLEICDLYT-EPHPVTELQSDEDRALYPEVI 494
                    +   + +  + N S+  D  D E+    T E +  +E  S E       V 
Sbjct: 555 -----GYQGSTSVISSHSRCNDSE--DQSDSEVLVQETAESYDNSETNSGEVDMTTTMVN 607

Query: 495 RIHEKNEFPFSLDS----NCSNQ--FKQFDIVENCSEHHFMDEGKGFSISQVRK 542
              E      +LDS    N  NQ  F+QFD+V +CS+HHF+   KG + SQV K
Sbjct: 608 IPIEGKGINKTLDSTLLENSRNQVRFRQFDMVNDCSDHHFLSSDKGLAQSQVTK 661


>AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme
           23 | chr2:7334559-7338827 REVERSE LENGTH=1102
          Length = 1102

 Score =  162 bits (409), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MGRVTSVDVFADLENVRGEVLKNVNSEKLMKIRSTSEGDYVIKGPWLGQVQRVVDKVTVL 60
           +G V  V++  DL    G + K+++++ L ++R  + GDYV+ GPWLG++  V+D VTVL
Sbjct: 161 VGVVVDVNISVDLLAPDGSIHKDISTKNLKRVRDFAVGDYVVHGPWLGRIDDVLDNVTVL 220

Query: 61  FDDGVKCDIVASDREKVLPLTGNFL-EDSQYPYYPGQRXXXXXXXXXXXXRWLCGTWRDN 119
           FDDG  C ++  +  ++ P+  N L ED+ +PYYPGQR            RWL G W+ N
Sbjct: 221 FDDGSMCKVLRVEPLRLKPIPKNNLEEDANFPYYPGQRVKASSSSVFKNSRWLSGLWKPN 280

Query: 120 QDEGTVCAVDAGLVYVNWLASVIVDCNLDVNAPPCWQGSENLTVLSSFSHANWNLGDWCM 179
           + EGTV  V AG ++V W+AS     +  V +PP  Q   NLT+LS F+HANW +GDWC+
Sbjct: 281 RLEGTVTKVTAGSIFVYWIASAGFGPDSSV-SPPEEQNPSNLTLLSCFTHANWQVGDWCL 339

Query: 180 LSAEGQ 185
           L +  Q
Sbjct: 340 LPSLNQ 345



 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 161/377 (42%), Gaps = 72/377 (19%)

Query: 198 KRFVLEKGASYDPLRPSSQRWGVVQGVDAKEHTVKVQWKTGSLSDPDNLSGNNMEETVSA 257
           +++V+EK +         +R GVV+ V+AK+ T  V+W    L   +       EE VS 
Sbjct: 490 EQYVVEKTSDDGDNTTEPRRAGVVKNVNAKDRTASVRW-LNPLRRAEEPREFEKEEIVSV 548

Query: 258 YELVEHPDYSCFYGDIMFK-------------------AAQKQFGYQAAKEKEKSSNDLN 298
           YEL  HPDY   YGD++ +                   A Q+  GYQ ++  +++   ++
Sbjct: 549 YELEGHPDYDYCYGDVVVRLSPIAVALPASSPGNSFEEATQQDNGYQDSESHQEAKILVD 608

Query: 299 ADTSLKNENQMGYQDGFSDDGFLHCIGSVIGFKDGDVEVKWATGFTTKVEPYEVVRIDKH 358
                K EN+       +D   L  +G++ G KDGD+EV WA G  + V P+ V  + + 
Sbjct: 609 -----KEENEPS-----TDLSKLSWVGNITGLKDGDIEVTWADGTISTVGPHAVYVVGRD 658

Query: 359 --------EGSTLNSSTYE--RNVEELTPEIIEHGSLPSDQKGKDSLNGDGSGE-NCEKY 407
                   E  T +++++E   + +   PEI E      D     S+ G+   +   E  
Sbjct: 659 DDDESVAGESETSDAASWETLNDDDRGAPEIPEE-----DLGRSSSIEGNSDADIYAEND 713

Query: 408 PGECSSFFLPGAAFEFFSSLKASIFQXXXXXXXXXXXAVYSVPTFEKE----NGSDFHDN 463
            G   +  LP AA EF + L + IF            + Y+V    K+    N SD  D+
Sbjct: 714 SGRNGALALPLAAIEFVTRLASGIFS-RARKSVDSSSSDYTVENVYKQAESTNPSDETDS 772

Query: 464 KDLEICDLYTEPHP----VTE------LQSDEDRALYPEVIRIHEKNEFPF-SLDSNCSN 512
            D        +P P    VT+       Q++    L  E     E  + P  S   +CS 
Sbjct: 773 LD--------DPSPSKVNVTDNCESKGTQANAKNILSGETSTFLEDEDKPVPSEGDSCS- 823

Query: 513 QFKQFDIVENCSEHHFM 529
            F++FDI ++  +HHF+
Sbjct: 824 -FRRFDISQDPLDHHFL 839