Miyakogusa Predicted Gene

Lj0g3v0266329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266329.1 Non Chatacterized Hit- tr|I1LFC1|I1LFC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4805
PE=,69.05,0,METHIONYL-TRNA SYNTHETASE,NULL; ISOLEUCYL, LEUCYL,
TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES,NUL,CUFF.17562.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55400.1 | Symbols: OVA1 | methionyl-tRNA synthetase / methio...   296   5e-81
AT3G55400.2 | Symbols: OVA1 | methionyl-tRNA synthetase / methio...   295   2e-80

>AT3G55400.1 | Symbols: OVA1 | methionyl-tRNA synthetase /
           methionine--tRNA ligase / MetRS (cpMetRS) |
           chr3:20535809-20538999 REVERSE LENGTH=616
          Length = 616

 Score =  296 bits (759), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 153/259 (59%), Positives = 177/259 (68%), Gaps = 47/259 (18%)

Query: 1   MAVRMNCSLQTTLSLFSLRPRASHLNLK------HHLHLGQTPPPHS-----RGALFCST 49
           MA R+N SL   LS   L+P  + LN K      +     +  P +S     + AL+C++
Sbjct: 1   MAARINTSLHNALSF--LKPFNTPLNTKPFSFRRNSFRFSKKLPYYSQFSSGKRALYCTS 58

Query: 50  TSVNTSPSNDESFVLTTPLYYVNAPPHMGSAYSTIAADAIARFQ---------------- 93
           +S  ++    E+FVLTTPLYYVNAPPHMGSAY+TIAAD+IARFQ                
Sbjct: 59  SSQESTVDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEH 118

Query: 94  ------------------VXLVSQAYKTLWKDLDISYDKFIRTTDSKHEAIVKEFYSRVL 135
                               L+SQ+Y+TLWKDLDI+YDKFIRTTD KHEAIVKEFY+RV 
Sbjct: 119 GEKIATSAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVF 178

Query: 136 ANGDIYRADYEGLYCVNCEEYKDEKELLDNNCCPVHQKPCVSRKEDNYFFALSKYQKSLE 195
           ANGDIYRADYEGLYCVNCEEYKDEKELL+NNCCPVHQ PCV+RKEDNYFFALSKYQK LE
Sbjct: 179 ANGDIYRADYEGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLE 238

Query: 196 ETLNTNPNFVQPSYRLNEV 214
           + L  NP FVQPSYRLNEV
Sbjct: 239 DILAQNPRFVQPSYRLNEV 257


>AT3G55400.2 | Symbols: OVA1 | methionyl-tRNA synthetase /
           methionine--tRNA ligase / MetRS (cpMetRS) |
           chr3:20536263-20538999 REVERSE LENGTH=533
          Length = 533

 Score =  295 bits (754), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/259 (59%), Positives = 177/259 (68%), Gaps = 47/259 (18%)

Query: 1   MAVRMNCSLQTTLSLFSLRPRASHLNLK------HHLHLGQTPPPHS-----RGALFCST 49
           MA R+N SL   LS   L+P  + LN K      +     +  P +S     + AL+C++
Sbjct: 1   MAARINTSLHNALSF--LKPFNTPLNTKPFSFRRNSFRFSKKLPYYSQFSSGKRALYCTS 58

Query: 50  TSVNTSPSNDESFVLTTPLYYVNAPPHMGSAYSTIAADAIARFQ---------------- 93
           +S  ++    E+FVLTTPLYYVNAPPHMGSAY+TIAAD+IARFQ                
Sbjct: 59  SSQESTVDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEH 118

Query: 94  ------------------VXLVSQAYKTLWKDLDISYDKFIRTTDSKHEAIVKEFYSRVL 135
                               L+SQ+Y+TLWKDLDI+YDKFIRTTD KHEAIVKEFY+RV 
Sbjct: 119 GEKIATSAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVF 178

Query: 136 ANGDIYRADYEGLYCVNCEEYKDEKELLDNNCCPVHQKPCVSRKEDNYFFALSKYQKSLE 195
           ANGDIYRADYEGLYCVNCEEYKDEKELL+NNCCPVHQ PCV+RKEDNYFFALSKYQK LE
Sbjct: 179 ANGDIYRADYEGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLE 238

Query: 196 ETLNTNPNFVQPSYRLNEV 214
           + L  NP FVQPSYRLNEV
Sbjct: 239 DILAQNPRFVQPSYRLNEV 257