Miyakogusa Predicted Gene

Lj0g3v0266289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266289.1 Non Chatacterized Hit- tr|D7TG96|D7TG96_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.11,0.000000000004,Peptidase_S28,Peptidase S28; LYSOSOMAL PRO-X
CARBOXYPEPTIDASE,NULL; PROTEASE S28 PRO-X CARBOXYPEPTID,CUFF.17555.1
         (99 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65760.1 | Symbols:  | Serine carboxypeptidase S28 family pro...    69   7e-13
AT2G24280.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    50   4e-07

>AT5G65760.1 | Symbols:  | Serine carboxypeptidase S28 family
           protein | chr5:26308289-26310891 FORWARD LENGTH=515
          Length = 515

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 55  HYETRYFQQRLDHFSFSELPPFPQRYLINTDHWDRSS--GPIFFYC 98
            YET++F Q+LDHFSF++LP F QRYLIN+DHW  +S  GPIF YC
Sbjct: 57  RYETKFFSQQLDHFSFADLPKFSQRYLINSDHWLGASALGPIFLYC 102


>AT2G24280.1 | Symbols:  | alpha/beta-Hydrolases superfamily
          protein | chr2:10334622-10336927 FORWARD LENGTH=494
          Length = 494

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 50 SQLDLHYETRYFQQRLDHFSFS--ELPPFPQRYLINTDHWDRSSGPIFFY 97
          S+ +L +ETRYF Q LDHFSF+      F Q+YLIN   W R  GPIF Y
Sbjct: 40 SKHELPFETRYFPQNLDHFSFTPDSYKVFHQKYLINNRFW-RKGGPIFVY 88