Miyakogusa Predicted Gene

Lj0g3v0266109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266109.1 Non Chatacterized Hit- tr|I1KFA1|I1KFA1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.32,0.00000005,
,CUFF.17544.1
         (38 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28300.1 | Symbols:  | Protein of unknown function (DUF1421) ...    52   8e-08
AT4G28300.2 | Symbols:  | Protein of unknown function (DUF1421) ...    52   8e-08

>AT4G28300.1 | Symbols:  | Protein of unknown function (DUF1421) |
           chr4:14014860-14016823 FORWARD LENGTH=496
          Length = 496

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query: 1   MFPATSYSPPEYSLSQDVIATIEKSMKNSADNLMQCLE 38
           +FP +SYSPPE SLSQD+  T+E++MK  ADN+M+ LE
Sbjct: 64  VFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLE 101


>AT4G28300.2 | Symbols:  | Protein of unknown function (DUF1421) |
          chr4:14015414-14016823 FORWARD LENGTH=438
          Length = 438

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query: 1  MFPATSYSPPEYSLSQDVIATIEKSMKNSADNLMQCLE 38
          +FP +SYSPPE SLSQD+  T+E++MK  ADN+M+ LE
Sbjct: 6  VFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLE 43