Miyakogusa Predicted Gene

Lj0g3v0265159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265159.1 Non Chatacterized Hit- tr|C6THS4|C6THS4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,81.03,5e-18,no
description,Thioredoxin-like fold; FAMILY NOT NAMED,NULL;
Suc_Fer-like,Sucraseferredoxin-like; Th,CUFF.17476.1
         (89 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26620.1 | Symbols:  | Sucrase/ferredoxin-like family protein...   164   8e-42
AT5G55900.1 | Symbols:  | Sucrase/ferredoxin-like family protein...   144   2e-35
AT3G27570.1 | Symbols:  | Sucrase/ferredoxin-like family protein...   122   4e-29
AT5G40510.1 | Symbols:  | Sucrase/ferredoxin-like family protein...   107   2e-24

>AT4G26620.1 | Symbols:  | Sucrase/ferredoxin-like family protein |
           chr4:13427599-13429877 REVERSE LENGTH=443
          Length = 443

 Score =  164 bits (416), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 3/92 (3%)

Query: 1   MIRYRRLTHFDVETFVEEVLVKDGEWLS---ESLKGSYVFVCSHASRDRRCGVCGPVLVS 57
           MIRYRRLTHFDVETFVEEVLVKDGEWL    E LKGSYVFVCSH SRDRRCGVCGP LVS
Sbjct: 151 MIRYRRLTHFDVETFVEEVLVKDGEWLPGNPELLKGSYVFVCSHGSRDRRCGVCGPSLVS 210

Query: 58  RFREEIELQGLQGKVFVSPCSHIGGHKYAGNI 89
           RFREE+E  GLQGKV +SPCSHIGGHKYAGN+
Sbjct: 211 RFREELEFHGLQGKVSISPCSHIGGHKYAGNV 242


>AT5G55900.1 | Symbols:  | Sucrase/ferredoxin-like family protein |
           chr5:22637612-22639602 FORWARD LENGTH=413
          Length = 413

 Score =  144 bits (362), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/92 (77%), Positives = 77/92 (83%), Gaps = 3/92 (3%)

Query: 1   MIRYRRLTHFDVETFVEEVLVKDGEWLS---ESLKGSYVFVCSHASRDRRCGVCGPVLVS 57
           MIRYRRLTHFDV+TFVEEVLVK  EWL    ESL  SYVFVC H SRDRRCGVCGP LVS
Sbjct: 139 MIRYRRLTHFDVDTFVEEVLVKGVEWLPGNPESLSSSYVFVCCHGSRDRRCGVCGPSLVS 198

Query: 58  RFREEIELQGLQGKVFVSPCSHIGGHKYAGNI 89
           RFREEI+  GL+G+V VSPCSHIGGHKY G++
Sbjct: 199 RFREEIDSCGLRGEVSVSPCSHIGGHKYTGDV 230


>AT3G27570.1 | Symbols:  | Sucrase/ferredoxin-like family protein |
           chr3:10214276-10216681 REVERSE LENGTH=379
          Length = 379

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 70/92 (76%), Gaps = 3/92 (3%)

Query: 1   MIRYRRLTHFDVETFVEEVLVKDGEWLS---ESLKGSYVFVCSHASRDRRCGVCGPVLVS 57
           M+RY+ +   DV+ FVE+VLVK   W S   E L GS+VFVC+H SRD+RCGVCGPVL+ 
Sbjct: 141 MVRYKAIQDTDVDAFVEDVLVKGKTWTSGIQEELTGSFVFVCAHGSRDKRCGVCGPVLME 200

Query: 58  RFREEIELQGLQGKVFVSPCSHIGGHKYAGNI 89
           +F +EI  +GL  K+FV PCSHIGGHKYAGN+
Sbjct: 201 KFEQEISSRGLSDKIFVLPCSHIGGHKYAGNL 232


>AT5G40510.1 | Symbols:  | Sucrase/ferredoxin-like family protein |
           chr5:16229277-16230798 FORWARD LENGTH=333
          Length = 333

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 3/92 (3%)

Query: 1   MIRYRRLTHFDVETFVEEVLVKDGEW---LSESLKGSYVFVCSHASRDRRCGVCGPVLVS 57
           MIRY+ +   DVE F E+VLV    W   + E + G++VFVC+HASRD+RCGVCGPV++ 
Sbjct: 99  MIRYKGVKDTDVEGFFEDVLVNGKPWSSGIQEEISGTFVFVCTHASRDKRCGVCGPVILE 158

Query: 58  RFREEIELQGLQGKVFVSPCSHIGGHKYAGNI 89
           RF++EI  +GL  ++ +  CSH+G HKYAGN+
Sbjct: 159 RFKQEIGSRGLSDQITLKRCSHVGQHKYAGNL 190