Miyakogusa Predicted Gene

Lj0g3v0264869.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264869.1 Non Chatacterized Hit- tr|I1M061|I1M061_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51915 PE,69.72,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.17733.1
         (1040 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24740.1 | Symbols:  | Protein of unknown function (DUF1162) ...   597   e-170

>AT5G24740.1 | Symbols:  | Protein of unknown function (DUF1162) |
            chr5:8470073-8489703 REVERSE LENGTH=3464
          Length = 3464

 Score =  597 bits (1539), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 377/1019 (36%), Positives = 574/1019 (56%), Gaps = 37/1019 (3%)

Query: 29   SNVFSIELHLYGIRVHFHDSSCIIGTIMVPTSKTSLLLCEDNIDILSSSEGLVLTSSWGP 88
            +N F++++H++   VHFHDSS + GTI++P S+  L + +D +D+++S+E L+L SS   
Sbjct: 1076 TNHFTVDMHVFNTNVHFHDSSSVFGTIILPVSRYFLNISDDLLDLVASAEDLMLVSSLFT 1135

Query: 89   RNFQDYLWGPSSENLSPILNVRVRKPQDKSSAVDLEISIGVQHVYCMLPSEYLSIIIGYF 148
                 +LW  SS ++S +LN+RVRK   + S   LE+SIG+QH YC+LP EYL+IIIGYF
Sbjct: 1136 NYSGGFLWKQSSTDVSQVLNLRVRKRGLEPSGSQLEVSIGIQHTYCILPPEYLAIIIGYF 1195

Query: 149  SLSDWAGDSSGQS-----SFEEPKIETGITYKFEILDSVLILPVESNEYQFLKVEIPQLY 203
            SLSDW   S  QS        +   E  I+YK EILDS ++LPVE ++ + LKV+I QLY
Sbjct: 1196 SLSDWTSKSGLQSLPQATELTKAHSEFAISYKIEILDSSIVLPVEGDDRRQLKVDIQQLY 1255

Query: 204  CSFVENLGFDDAMKDIPTKCFVPIQKLAKRNSCLNVFGRDLFVSFLLYKNDMLGLATIEN 263
             SF+      + ++ IP +C +P+ ++  R  CLN+FGRDL VS LL ++D+      +N
Sbjct: 1256 ISFIPECALSNVVQHIPQECVIPLNQVLGRADCLNIFGRDLSVSLLLSESDISTFK--KN 1313

Query: 264  AEFISTSLIAPINADVWVRIPCRGVTNCKNYSPSICFMTSIRSCQLIAEDSHCLDGCLAI 323
            A   S +L A I AD W+R PC    +    +   C M+ +  C+++ +DS  LDG  A 
Sbjct: 1314 AVCRSITLAASIIADTWIRFPC----DHNPLTELACVMSRVDVCEIVVDDSDALDGFKAF 1369

Query: 324  RDVIEEFSTIGDQSKCFKSDVLQFLHSKRSL-METGVNNPTPMTSTIVLTEVKCCTESLL 382
             DV+++ S + ++SK F SDV QFLH+K  L  E  V    P TS I          +LL
Sbjct: 1370 LDVVDQLSLVDEESKLFVSDVPQFLHTKMRLKQELSVAPLEPSTSFIKFR----IFVNLL 1425

Query: 383  ISCCHR----HGDFV-KLISKGDLRFTCAASLIDDSLEWLELGFSSLAFYSSHNSV-LAK 436
             S  HR     G  + + + + D++F C+  L ++    L++ F  +  YS  +SV LA+
Sbjct: 1426 TSKLHRLRKAPGTLLSEPVLQADMKFVCSGELKNNFPMSLDVQFFKIGLYSLLSSVMLAR 1485

Query: 437  CTSTPISTVVLGICLSKSVDFKNELSFHLPSLDIWLYLSEWTEVFKFLNDLSVHLEETPI 496
            C +       L +  ++  + + +L F LPSLDIWL+  +W EV + L   S  LE++  
Sbjct: 1486 CINADGDPSALRVRFTEQAENEYDLCFSLPSLDIWLHFFDWIEVIELLKSYSQKLEDSSE 1545

Query: 497  DVASMSLPXXXXXXXXXXXXXXXXCSLDSEGASAPFATQEIEN---VVLMTIRSKNACVK 553
            D                       C  +++       T+  EN   V+    RS+N  VK
Sbjct: 1546 D--RFFSKGSKLDMDESIGVVRTICD-NTDRVLNVLQTEVSENSSEVMSFAARSENIGVK 1602

Query: 554  FYIPVSASEEPCVEFQIAESLEVTPLRVSSDVIEEKDTKFLTVSFNVNDFDLVMRSRDIH 613
             +IP+  S      F   +  E++     ++  +    K+++V+      +L +  RD+ 
Sbjct: 1603 IHIPLCTSHTEFPGFMATDVHEISE-EEHTNCFKGNYCKYVSVTACSRSGELSILGRDVK 1661

Query: 614  LKSNMEKLSCVIIIVENGRHTSWPLLDIIQVHMDTVLCKNQTNTIELKVEILCDHADVWL 673
            L   +EKL+ ++ I       S  L    Q+ ++T +  +Q   + + V IL D  ++  
Sbjct: 1662 LSYKIEKLNGILAISGVDTVRSCSLFGAAQLLVETSIQMDQNKIMSIDVGILSDKVEMHA 1721

Query: 674  SHPTLLLLGAVKFDVPKSGSSQYSTSDITFKFQMRKVSILLTDGKWSYNGPQLEILVRTI 733
            SH  L     + FD P++ SSQ S  +++ K Q+R VS+L++DGKW  +G  LE+L+R  
Sbjct: 1722 SHQVLSFWHGITFDAPETPSSQNSEGNMSIKVQIRDVSLLISDGKWGCSGMLLEVLMRNF 1781

Query: 734  LFHAIAIGKHVDCSITGDLQVNYKNIEKVSWEPFIEPWQFLLTLVRDQEMNVLPNRPVST 793
            L  A    K+++  ++ DL+VNY N+ KV WEPFIEPW F + L R  + N L N    T
Sbjct: 1782 LLQANLAEKNMESLVSCDLEVNYNNMHKVLWEPFIEPWNFDIKLSRKFDANSLLNNAGLT 1841

Query: 794  DIVLGSRTQLNINITESLVECVSHAIEILNDAWGLKGSKDHEGKELSHSSCPQNMSSKRC 853
            ++++ S  QLN+N+TESL EC+   IE+LN    ++     + K LS   C  +  ++R 
Sbjct: 1842 EVIVASSNQLNLNLTESLFECIFRIIEMLNILELMETDAIPDNKGLS-VYCTNSTRTER- 1899

Query: 854  AAPYVLQNLTSVPLLYHIYHGSSNPDEIFESDENPANYVQPGSAISVYMDENDEQRLPHY 913
             +PYVLQNLTS+PL Y ++ G  + D +  S     N+VQPG ++ +Y+D +D   +P  
Sbjct: 1900 YSPYVLQNLTSLPLGYQVFQG-HDSDVLNISAPVAQNFVQPGCSVPIYIDNSDTLLIPDR 1958

Query: 914  RHSNSSDSLNEQRSSGFTHHYITVQLDGASMPSDPISMDLVGLTCFEVNFSKT---YDQN 970
            R S    S +E  S    HHY+ VQLDG S  S P SMD +GL+ FEV+FSKT    D  
Sbjct: 1959 RRSQFGCSSSE--SGDAIHHYMKVQLDGTSFASPPHSMDRIGLSYFEVDFSKTSNSSDNV 2016

Query: 971  GQGGRMNSGATFVVPVVFDVSMLRYSKLIRIYSTVVLLNATSTPLELRFDIPFGVSPTV 1029
             +  +   G++FVVPVV++VS+ + SKLIR+YSTV++LN+TS PLELRFDIPFG+SP +
Sbjct: 2017 EKASKSGYGSSFVVPVVYEVSLQQQSKLIRVYSTVIILNSTSMPLELRFDIPFGISPKL 2075