Miyakogusa Predicted Gene

Lj0g3v0264699.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264699.1 Non Chatacterized Hit- tr|I1L5T0|I1L5T0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.28,0.000000000000006,seg,NULL,CUFF.17470.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47870.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   142   1e-34
AT1G71310.1 | Symbols:  | cobalt ion binding | chr1:26878717-268...    82   2e-16
AT1G71310.2 | Symbols:  | cobalt ion binding | chr1:26878717-268...    82   2e-16
AT1G71310.3 | Symbols:  | cobalt ion binding | chr1:26879179-268...    81   4e-16

>AT5G47870.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
           thaliana protein match is: cobalt ion binding
           (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:19384555-19385808
           REVERSE LENGTH=199
          Length = 199

 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/90 (76%), Positives = 77/90 (85%), Gaps = 5/90 (5%)

Query: 75  YVVPLDNSFPFSNSSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSAST--FIPWYHANR 132
           YVVP+D    FS+SS ITRPL EILRDLNK+IPD IVK+H P   SA+T  FIPWYHANR
Sbjct: 61  YVVPIDK---FSSSSSITRPLIEILRDLNKKIPDNIVKSHDPPSTSAATSGFIPWYHANR 117

Query: 133 MLSFYAPGWCGEIRDVIFSDNGSVTVVYRL 162
           MLSFYAPGWCGE+RDVIFS+NG+VTVVYRL
Sbjct: 118 MLSFYAPGWCGEVRDVIFSENGNVTVVYRL 147


>AT1G71310.1 | Symbols:  | cobalt ion binding |
           chr1:26878717-26879844 REVERSE LENGTH=176
          Length = 176

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 5/89 (5%)

Query: 75  YVVPLDNSFPFSNSSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSASTFIPWYHANRML 134
           +    +N  P   +S I+RPLAEIL++LNK++PD++++  V D  S   +IPW+  NR++
Sbjct: 37  FSTETENDVP---TSGISRPLAEILKELNKKVPDSVIRTRVEDGCSIK-YIPWHIVNRIM 92

Query: 135 SFYAPGWCGEIRDVIFS-DNGSVTVVYRL 162
           + +AP W GE+R V +S D  +VTV YR+
Sbjct: 93  NMHAPEWSGEVRSVTYSPDGNTVTVAYRV 121


>AT1G71310.2 | Symbols:  | cobalt ion binding |
           chr1:26878717-26879844 REVERSE LENGTH=176
          Length = 176

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 5/89 (5%)

Query: 75  YVVPLDNSFPFSNSSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSASTFIPWYHANRML 134
           +    +N  P   +S I+RPLAEIL++LNK++PD++++  V D  S   +IPW+  NR++
Sbjct: 37  FSTETENDVP---TSGISRPLAEILKELNKKVPDSVIRTRVEDGCSIK-YIPWHIVNRIM 92

Query: 135 SFYAPGWCGEIRDVIFS-DNGSVTVVYRL 162
           + +AP W GE+R V +S D  +VTV YR+
Sbjct: 93  NMHAPEWSGEVRSVTYSPDGNTVTVAYRV 121


>AT1G71310.3 | Symbols:  | cobalt ion binding |
           chr1:26879179-26879844 REVERSE LENGTH=165
          Length = 165

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 5/84 (5%)

Query: 80  DNSFPFSNSSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSASTFIPWYHANRMLSFYAP 139
           +N  P   +S I+RPLAEIL++LNK++PD++++  V D  S   +IPW+  NR+++ +AP
Sbjct: 42  ENDVP---TSGISRPLAEILKELNKKVPDSVIRTRVEDGCSIK-YIPWHIVNRIMNMHAP 97

Query: 140 GWCGEIRDVIFS-DNGSVTVVYRL 162
            W GE+R V +S D  +VTV YR+
Sbjct: 98  EWSGEVRSVTYSPDGNTVTVAYRV 121