Miyakogusa Predicted Gene

Lj0g3v0264609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264609.1 Non Chatacterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903
PE=,97.87,1e-17,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1,NODE_15647_length_163_cov_172.061356.path1.1
         (47 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |...    91   2e-19
AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:...    87   2e-18
AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:...    87   2e-18
AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A | chr...    70   2e-13

>AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |
           chr3:8669013-8672278 FORWARD LENGTH=577
          Length = 577

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/47 (93%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGI+MAVD+VVTNLKS+ARMISTSEEIAQVGTISANGERE
Sbjct: 141 MNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGERE 187


>AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 |
           chr2:14075093-14078568 REVERSE LENGTH=580
          Length = 580

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGI +AVD+VVTNL+SRARMISTSEEIAQVGTISANG+RE
Sbjct: 142 MNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDRE 188


>AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 |
           chr2:14075093-14078568 REVERSE LENGTH=585
          Length = 585

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGI +AVD+VVTNL+SRARMISTSEEIAQVGTISANG+RE
Sbjct: 142 MNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDRE 188


>AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A |
           chr3:4561704-4565133 REVERSE LENGTH=572
          Length = 572

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 40/47 (85%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           +N MDLR GINMA+ +VV++LKSRA MIST EEI QV TISANGERE
Sbjct: 141 VNVMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGERE 187