Miyakogusa Predicted Gene

Lj0g3v0264389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264389.1 Non Chatacterized Hit- tr|B9SEH3|B9SEH3_RICCO
Cytochrome B561, putative OS=Ricinus communis
GN=RCOM_,44.78,0.000002,Cytochrome b-561 / ferric reductase
transmem,Cytochrome b561/ferric reductase transmembrane;
seg,NUL,CUFF.17436.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38630.1 | Symbols: ACYB-1, CYB-1 | cytochrome B561-1 | chr5:...   199   5e-52
AT1G26100.1 | Symbols:  | Cytochrome b561/ferric reductase trans...   106   7e-24
AT4G25570.1 | Symbols: ACYB-2 | Cytochrome b561/ferric reductase...   102   1e-22
AT1G14730.1 | Symbols:  | Cytochrome b561/ferric reductase trans...    79   1e-15

>AT5G38630.1 | Symbols: ACYB-1, CYB-1 | cytochrome B561-1 |
           chr5:15466141-15467511 FORWARD LENGTH=230
          Length = 230

 Score =  199 bits (507), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 105/135 (77%)

Query: 1   MLAYKTISGTKNFKKAVHLAFQLVSLILSLVGVWAAWKFHIDKGIDNFYSLHSWLGLACL 60
           MLAYK++ GTKN KK VHL  QL + ILSL+GVWAA KFHIDKGI+NFYSLHSWLGLACL
Sbjct: 67  MLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACL 126

Query: 61  FLFSIQWAAGFATFWYPGGSRNSRAALLPWHAFFXXXXXXXXXXXXXXXXXEKLTFLQVN 120
           FLF+ QWAAGF T+WYPGGSRNSRA+L+PWH F                  EK+TFLQVN
Sbjct: 127 FLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVN 186

Query: 121 KIISRYSNEAMLVNS 135
           ++I+RYS EAMLVN+
Sbjct: 187 QVITRYSTEAMLVNT 201


>AT1G26100.1 | Symbols:  | Cytochrome b561/ferric reductase
           transmembrane protein family | chr1:9022716-9024081
           REVERSE LENGTH=236
          Length = 236

 Score =  106 bits (265), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 1   MLAYKTISGTKNFKKAVHLAFQLVSLILSLVGVWAAWKFHIDKGI-DNFYSLHSWLGLAC 59
           +L ++ + G++  KKAVHL  Q ++L  ++ G+W   KFH  +G+  NFYSLHSW+GL  
Sbjct: 60  ILIHRWLPGSRKTKKAVHLWLQGMALASAVFGIWT--KFHYQRGVFANFYSLHSWMGLLS 117

Query: 60  LFLFSIQWAAGFATFWYPGGSRNSRAALLPWHAFFXXXXXXXXXXXXXXXXXEKLTFLQV 119
           + LF+ QW  GF +FW+ G  R +R   LPWH F                  EKLTFLQ 
Sbjct: 118 VSLFAAQWVTGFMSFWHRGEVRTTRTTFLPWHVFLGLYTYGLAIATAETGLLEKLTFLQT 177

Query: 120 NKIISRYSNEAMLVN 134
            + + R  +E+M VN
Sbjct: 178 KRNVPRRGSESMTVN 192


>AT4G25570.1 | Symbols: ACYB-2 | Cytochrome b561/ferric reductase
           transmembrane protein family | chr4:13053887-13055518
           REVERSE LENGTH=239
          Length = 239

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 1   MLAYKTISGTKNFKKAVHLAFQLVSLILSLVGVWAAWKFHIDKGIDNFYSLHSWLGLACL 60
           +++YK++   K  KK +HL    ++L L + G+ AA+K H +  I N YSLHSW+G+  +
Sbjct: 66  IISYKSLPLEKPVKKLIHLILHAIALALGIFGICAAFKNHNESHIPNLYSLHSWIGIGVI 125

Query: 61  FLFSIQWAAGFATFWYPGGSRNSRAALLPWHAFFXXXXXXXXXXXXXXXXXEKLTFLQVN 120
            L+  QW   F  F++PGGS N ++ LLPWHA                   EKLTFL+ N
Sbjct: 126 SLYGFQWVYSFIVFFFPGGSTNLKSGLLPWHAMLGLFVYILAVGNAALGFLEKLTFLE-N 184

Query: 121 KIISRYSNEAMLVN 134
             + +Y +EA L+N
Sbjct: 185 GGLDKYGSEAFLIN 198


>AT1G14730.1 | Symbols:  | Cytochrome b561/ferric reductase
           transmembrane protein family | chr1:5073244-5074568
           FORWARD LENGTH=224
          Length = 224

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%)

Query: 1   MLAYKTISGTKNFKKAVHLAFQLVSLILSLVGVWAAWKFHIDKGIDNFYSLHSWLGLACL 60
           M+ YKT   +   +K VH    L+ L+L +VG+ AA++FH    + +  SLHSW+GL   
Sbjct: 73  MMTYKTAYASHQVQKMVHGGLHLIGLVLGIVGICAAFRFHDKVNLKDMVSLHSWIGLTTF 132

Query: 61  FLFSIQWAAGFATFWYPGGSRNSRAALLPWHAF 93
            L  +QW  G  TF  P  S  +R  ++PWH  
Sbjct: 133 ILLGVQWLFGAFTFLAPQSSSGTRTRMMPWHVL 165