Miyakogusa Predicted Gene

Lj0g3v0264369.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264369.2 Non Chatacterized Hit- tr|I1N6M9|I1N6M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6621
PE=,94.59,0,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA,NULL;
TRANSLATION INITIATION FACTOR EIF-2B,Initia,CUFF.17443.2
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38640.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   301   2e-82
AT2G44070.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   284   3e-77
AT1G48970.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   260   4e-70
AT1G72340.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...    62   2e-10
AT1G53900.1 | Symbols:  | Eukaryotic translation initiation fact...    57   6e-09
AT1G53880.1 | Symbols:  | Eukaryotic translation initiation fact...    57   6e-09
AT3G07300.3 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...    56   1e-08
AT3G07300.2 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...    55   2e-08
AT3G07300.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...    55   2e-08

>AT5G38640.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr5:15468020-15470674 REVERSE
           LENGTH=642
          Length = 642

 Score =  301 bits (770), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 140/185 (75%), Positives = 157/185 (84%)

Query: 1   MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
           M++LHAHEL K+FRV+VVDSRP                +CTYTHINA+SYIMHEVT+VFL
Sbjct: 458 MVILHAHELRKKFRVLVVDSRPKLEGQLLLRRLIKRGINCTYTHINAISYIMHEVTKVFL 517

Query: 61  GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
           GASSVLSNGTVYSRVGTACVAMVA+AFRVPV+VCCEAYKFHERVQLDSICSNELGDP+ I
Sbjct: 518 GASSVLSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHERVQLDSICSNELGDPNAI 577

Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGK 180
           S V GRED+NYLDG  +  NLQ LNL+YDATPSDY+SMI+TDYGMVPPTSVPVIVREY K
Sbjct: 578 SEVHGREDINYLDGLTNNANLQFLNLMYDATPSDYISMIITDYGMVPPTSVPVIVREYQK 637

Query: 181 EQVWI 185
           E + +
Sbjct: 638 EHLLV 642


>AT2G44070.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:18231097-18232469 REVERSE
           LENGTH=333
          Length = 333

 Score =  284 bits (726), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 135/184 (73%), Positives = 153/184 (83%), Gaps = 1/184 (0%)

Query: 1   MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
           MIL+HAHELGK+FRV VVDSRP                +CTYTHI A+SYIMH+VT+VFL
Sbjct: 142 MILVHAHELGKKFRVFVVDSRPKLQGKLLLRRLIKRGINCTYTHITAISYIMHQVTKVFL 201

Query: 61  GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLD-SICSNELGDPDI 119
           GASSV SNGTVYSRVGTACVAMVA+AFRVPV+VCCEAYKFHE+VQLD SICSNELGDP+ 
Sbjct: 202 GASSVFSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHEKVQLDYSICSNELGDPNA 261

Query: 120 ISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYG 179
           IS V GRED+NYL+G  +   L+ LNL+YDATPSDY+SMI+TDYGMVPPTSVPVIVREY 
Sbjct: 262 ISKVHGREDINYLNGLTNNAKLKFLNLMYDATPSDYISMIITDYGMVPPTSVPVIVREYQ 321

Query: 180 KEQV 183
           KE +
Sbjct: 322 KEHL 325


>AT1G48970.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr1:18113868-18117547 REVERSE
           LENGTH=666
          Length = 666

 Score =  260 bits (665), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 119/184 (64%), Positives = 146/184 (79%), Gaps = 1/184 (0%)

Query: 1   MILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFL 60
           MILL+AHE+GK+FRVV+VDSRP                 CTYTHINA+SYIM E TRVFL
Sbjct: 481 MILLYAHEIGKKFRVVIVDSRPNLEGQKLLRRLVTRGLDCTYTHINAISYIMREATRVFL 540

Query: 61  GASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDII 120
           GASS+ SNGT+Y+RVGT+C+AMVA+AF VPVIVCCEAYKFHERV LDSICSNELGDPD +
Sbjct: 541 GASSIYSNGTLYARVGTSCIAMVANAFSVPVIVCCEAYKFHERVLLDSICSNELGDPDAV 600

Query: 121 SNVLG-REDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYG 179
           +N+   R +  +     + +NLQ LNL+YD+TPS+Y+SMIV+DYGM+PPTS+PVIVREY 
Sbjct: 601 ANIPSFRTNAKHSKTMDNNKNLQFLNLMYDSTPSEYISMIVSDYGMIPPTSIPVIVREYR 660

Query: 180 KEQV 183
           +E +
Sbjct: 661 RENL 664


>AT1G72340.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr1:27236898-27238482 FORWARD
           LENGTH=382
          Length = 382

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 13/170 (7%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
           IL  A +  K FRV+  + RP                       +AV+Y M EV  VF+G
Sbjct: 217 ILKTAAQNNKLFRVLCTEGRPDGTGVLLSSELSKLDIPVKLLLDSAVAYSMDEVDMVFVG 276

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIIS 121
           A  V+ +G + + +GT  +A+VAH+   PV V  E+YKF     LD          D+  
Sbjct: 277 ADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQ--------KDMAP 328

Query: 122 NVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
            +   E    +    ++E         D TP  Y++++ TD G++ P+ V
Sbjct: 329 ALRPIEFGVKIPTKVEVE-----RSARDYTPPQYLTLLFTDLGVLSPSVV 373


>AT1G53900.1 | Symbols:  | Eukaryotic translation initiation factor
           2B (eIF-2B) family protein | chr1:20127634-20130834
           FORWARD LENGTH=580
          Length = 580

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 15/171 (8%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
           IL  + +  K FRV+  + RP                       +AV+Y M EV  VF+G
Sbjct: 415 ILKTSAQNKKLFRVLCTEGRPDKTGVLLANELAKLDIPVKLLIDSAVAYSMDEVDMVFVG 474

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDP-DII 120
           A  V+ +G + + +GT  +A+VA +   PV V  E+YKF     LD         P D  
Sbjct: 475 ADGVVESGGIINMMGTYQIALVAQSMNKPVYVAAESYKFARLYPLDQKDLEPALRPIDFS 534

Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
             V  + +V                   D TP  Y++++ TD G++ P+ V
Sbjct: 535 VPVPPKVEVE--------------RSARDYTPPQYLTLLFTDLGVLTPSVV 571


>AT1G53880.1 | Symbols:  | Eukaryotic translation initiation factor
           2B (eIF-2B) family protein | chr1:20115069-20118269
           FORWARD LENGTH=580
          Length = 580

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 15/171 (8%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
           IL  + +  K FRV+  + RP                       +AV+Y M EV  VF+G
Sbjct: 415 ILKTSAQNKKLFRVLCTEGRPDKTGVLLANELAKLDIPVKLLIDSAVAYSMDEVDMVFVG 474

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDP-DII 120
           A  V+ +G + + +GT  +A+VA +   PV V  E+YKF     LD         P D  
Sbjct: 475 ADGVVESGGIINMMGTYQIALVAQSMNKPVYVAAESYKFARLYPLDQKDLEPALRPIDFS 534

Query: 121 SNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSV 171
             V  + +V                   D TP  Y++++ TD G++ P+ V
Sbjct: 535 VPVPPKVEVE--------------RSARDYTPPQYLTLLFTDLGVLTPSVV 571


>AT3G07300.3 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr3:2324967-2327380 REVERSE
           LENGTH=409
          Length = 409

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
            L  A E  + FRV V +  P                  T    +AV  ++  V  V +G
Sbjct: 226 FLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSAVFAMISRVNMVIIG 285

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICSNELG 115
           A +V++NG V   VG    A+ A    VP +V       C  Y  +  V L     NEL 
Sbjct: 286 AHAVMANGGVIGPVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHNPEVLL-----NELR 340

Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
            P  + +    E  + LD  A   +LQ++N  +D  P + VS+ +TD G   P+ +  ++
Sbjct: 341 SPSELLDF--GEFSDCLDFGAGSGSLQVVNPTFDYVPPNLVSLFITDTGGHNPSYMYRLI 398

Query: 176 REY 178
            +Y
Sbjct: 399 ADY 401


>AT3G07300.2 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr3:2324967-2327380 REVERSE
           LENGTH=407
          Length = 407

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
            L  A E  + FRV V +  P                  T    +AV  ++  V  V +G
Sbjct: 224 FLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSAVFAMISRVNMVIIG 283

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICSNELG 115
           A +V++NG V   VG    A+ A    VP +V       C  Y  +  V L     NEL 
Sbjct: 284 AHAVMANGGVIGPVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHNPEVLL-----NELR 338

Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
            P  + +    E  + LD  A   +LQ++N  +D  P + VS+ +TD G   P+ +  ++
Sbjct: 339 SPSELLDF--GEFSDCLDFGAGSGSLQVVNPTFDYVPPNLVSLFITDTGGHNPSYMYRLI 396

Query: 176 REY 178
            +Y
Sbjct: 397 ADY 399


>AT3G07300.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr3:2324967-2327380 REVERSE
           LENGTH=407
          Length = 407

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 2   ILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLG 61
            L  A E  + FRV V +  P                  T    +AV  ++  V  V +G
Sbjct: 224 FLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSAVFAMISRVNMVIIG 283

Query: 62  ASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFHERVQLDSICSNELG 115
           A +V++NG V   VG    A+ A    VP +V       C  Y  +  V L     NEL 
Sbjct: 284 AHAVMANGGVIGPVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHNPEVLL-----NELR 338

Query: 116 DPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIV 175
            P  + +    E  + LD  A   +LQ++N  +D  P + VS+ +TD G   P+ +  ++
Sbjct: 339 SPSELLDF--GEFSDCLDFGAGSGSLQVVNPTFDYVPPNLVSLFITDTGGHNPSYMYRLI 396

Query: 176 REY 178
            +Y
Sbjct: 397 ADY 399